# terms

id: GO:0031073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydroxylation of cholesterol at position 26 of the side chain, to produce 26-hydroxycholesterol.","definition_xrefs":["GOC:mah","PMID:950499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cholesterol 26-hydroxylase activity","termid":"GO:0031073"}


id: PBO:0069041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 286, pseudogene","termid":"PBO:0069041"}


id: PBO:0075254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 7","termid":"PBO:0075254"}


id: PBO:0113256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pbp1p binding protein; interacts strongly with Pab1p-binding protein 1 (Pbp1p) in the yeast two-hybrid system; also interacts with Lsm12p in a copurification assay; relative distribution to the nucleus increases upon DNA replication stress; also detected in peroxisomes","termid":"PBO:0113256"}


id: PBO:0060642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor coactivator 4 pseudogene 1","termid":"PBO:0060642"}


id: PBO:0057407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548i-4","termid":"PBO:0057407"}


id: GO:0003420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the multiplication or reproduction of chondrocytes in a growing endochondral bone, resulting in the expansion of a cell population.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"growth plate cartilage chondrocyte proliferation","termid":"GO:0003419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of growth plate cartilage chondrocyte proliferation","termid":"GO:0003420"}


id: PBO:0075472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 22","termid":"PBO:0075472"}


id: PBO:0074095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC26A9 and RAB7B antisense RNA 1","termid":"PBO:0074095"}


id: PATO:0001162
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concentration which is higher relative to the normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"concentrated","termid":"PATO:0001159"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased concentration","synonyms":[{"name":"high concentration","type":"exact"}],"termid":"PATO:0001162"}


id: FYPO:0007670
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, is normal length, and has one nucleus and one septum. The septum divides the cell into two compartments, one of which contains the nucleus.","definition_xrefs":["PMID:9862966","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable vegetative cell with normal cell morphology","termid":"FYPO:0002199"},{"relation_name":"is_a","term_name":"inviable mononucleate monoseptate vegetative cell with anucleate compartment","termid":"FYPO:0002303"},{"relation_name":"is_a","term_name":"normal vegetative cell length","termid":"FYPO:0003503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000004","FYPO:0001320","FYPO:0005447","FYPO:0001312","FYPO:0000002","FYPO:0001985","FYPO:0000257","FYPO:0000631","FYPO:0000337"],"is_obsolete":false,"name":"inviable mononucleate monoseptate vegetative cell with anucleate compartment and normal cell length","synonyms":[{"name":"inviable mononucleate monoseptate cell with anucleate compartment and normal cell length during vegetative growth","type":"exact"},{"name":"inviable mononucleate monoseptate vegetative cell with normal cell length","type":"exact"},{"name":"inviable mononucleate monoseptate vegetative cell with normal cell length during mitotic cell cycle","type":"related"},{"name":"inviable with septation in the absence of nuclear division; normal cell length","type":"related"},{"name":"inviable with septation independent of mitosis, normal cell length","type":"related"},{"name":"inviable with septation without nuclear division; normal cell length","type":"related"},{"name":"lethal; mononucleate monoseptate vegetative cell with normal cell length","type":"exact"}],"termid":"FYPO:0007670"}


id: GO:0007230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium-o-sensing receptor pathway (obsolete GO:0007230)","synonyms":[{"name":"calcium-o-sensing receptor pathway","type":"exact"}],"termid":"GO:0007230"}


id: PBO:0027191
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_misfolded_protein_degradation","termid":"PBO:0027191"}


id: GO:0050256
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribitol 5-phosphate + NAD(P)+ = D-ribulose 5-phosphate + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"ribitol-5-phosphate 2-dehydrogenase [(NAD(P)+] activity","secondary_identifiers":["MetaCyc:RIBITOL-5-PHOSPHATE-2-DEHYDROGENASE-RXN"],"synonyms":[{"name":"D-ribitol-5-phosphate:NAD(P)+ 2-oxidoreductase activity","type":"related"},{"name":"dehydrogenase, ribitol 5-phosphate","type":"related"}],"termid":"GO:0050256"}


id: PR:000044739
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe) that has been post-translationally modified to include phosphoserine at position 7 of one or more C-terminal heptad repeats (YSPTSPS).","definition_xrefs":["PMID:28367989","PRO:DAN","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe)","termid":"PR:000044736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rpb1/Phos(CTD-S7)","pombase_gene_id":"SPBC28F2.12","synonyms":[{"name":"PomBase_original_PRO_term_name: DNA-directed RNA polymerase II subunit rpb1 phosphorylated 6 (Schizosaccharomyces pombe)","type":"exact"},{"name":"S7P-Pol II (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rpb1/Phos(CTD)S7","type":"exact"},{"name":"rpb1/Phos(CTD-S7)","type":"exact"}],"termid":"PR:000044739"}


id: PR:000059631
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A kinetochore protein spc7 (Schizosaccharomyces pombe) that has been phosphorylated on residues at positions equivalent to Thr-257, Thr-338, Thr-366, Thr-395, Thr-422, Thr-453, Thr-507, Thr-529, and Thr-552 of the amino acid sequence represented by UniProtKB:O59757. Example: UniProtKB:O59757, Thr-257/Thr-338/Thr-366/Thr-395/Thr-422/Thr-453/Thr-507/Thr-529/Thr-552, MOD:00047.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:22521786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spc7/Phos-MELT","pombase_gene_id":"SPCC1020.02","synonyms":[{"name":"PomBase_original_PRO_term_name: kinetochore protein spc7 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spc7/Phos-MELT","type":"exact"},{"name":"Spom-spc7/Phos:1","type":"exact"},{"name":"UniProtKB:O59757, Thr-257/Thr-338/Thr-366/Thr-395/Thr-422/Thr-453/Thr-507/Thr-529/Thr-552, MOD:00047","type":"narrow"}],"termid":"PR:000059631"}


id: PBO:0091478
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 Homology Domain","termid":"PBO:0091478"}


id: PBO:0027792
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_phosphatase_activity","termid":"PBO:0027792"}


id: GO:0009645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a low light intensity stimulus. Low light intensity is defined as a level of electromagnetic radiation at or below 0.1 micromols/m2.","definition_xrefs":["GOC:go_curators","GOC:mtg_far_red"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light intensity","termid":"GO:0009642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to low light intensity stimulus","termid":"GO:0009645"}


id: PBO:0042891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor B","termid":"PBO:0042891"}


id: PBO:0063315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCI domain containing 2","termid":"PBO:0063315"}


id: PR:O94309
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- git11 gene.","definition_xrefs":["UniProtKB:O94309","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine nucleotide-binding protein subunit gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.04","synonyms":[{"name":"Spom972h-git11","type":"exact"}],"termid":"PR:O94309"}


id: GO:0032334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of an inhibin, either of two glycoproteins (designated A and B), secreted by the gonads and present in seminal plasma and follicular fluid, that inhibit pituitary production of follicle-stimulating hormone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine hormone secretion","termid":"GO:0060986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052","GO:0051179"],"is_obsolete":false,"name":"inhibin secretion","termid":"GO:0032334"}


id: PBO:0030419
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_cytoplasm","termid":"PBO:0030419"}


id: PBO:0027204
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_microtubule_depolymerization_at_minus_end","termid":"PBO:0027204"}


id: PBO:0055901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 24","termid":"PBO:0055901"}


id: PBO:0003005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIPSY domain","termid":"PBO:0003005"}


id: PBO:0058533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6078","termid":"PBO:0058533"}


id: PBO:0079788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A9","termid":"PBO:0079788"}


id: PBO:0035959
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_methylation_at_mating_type_locus_during_vegetative_growth","termid":"PBO:0035959"}


id: PBO:0045592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 3 (pseudogene)","termid":"PBO:0045592"}


id: SO:0002084
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant in which a change has occurred within the exonic region of the splice site, 1-2 bases from boundary.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_region_variant","termid":"SO:0001630"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonic_splice_region_variant","synonyms":[{"name":"ANNOVAR:exonic;splicing","type":"exact"},{"name":"Seattleseq:coding-near-splice","type":"related"},{"name":"exonic splice region variant","type":"exact"}],"termid":"SO:0002084"}


id: GO:0019202
data:
  {"annotated_genes":["SJAG_03457","SJAG_00881","SJAG_03141"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004072"},{"annotations":[86952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004349"},{"annotations":[106748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004413"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphate group, usually from ATP, to an amino acid substrate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00881":null,"SJAG_03141":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"amino acid kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019202","terms_by_termid":{"GO:0004072":null,"GO:0004349":null,"GO:0004413":null}}


id: GO:0106332
data:
  {"annotated_genes":["SJAG_05237"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97247],"is_not":false,"summary":null,"term":"GO:0106332"}]},"cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of double-stranded DNA near a double-strand/single-strand DNA junction.","definition_xrefs":["PMID:14528010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-stranded DNA endonuclease activity","termid":"GO:1990238"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140097","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"ds/ssDNA junction-specific dsDNA endonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106332","terms_by_termid":{"GO:0106332":null}}


id: PBO:0013045
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nmt1 Transcription Factor","termid":"PBO:0013045"}


id: PBO:0054447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1844","termid":"PBO:0054447"}


id: RO:0002607
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c is marker for d iff the presence or occurrence of d is correlated with the presence of occurrence of c, and the observation of c is used to infer the presence or occurrence of d. Note that this does not imply that c and d are in a direct causal relationship, as it may be the case that there is a third entity e that stands in a direct causal relationship with c and d.","direct_ancestors":[{"relation_name":"is_a","term_name":"correlated_with","termid":"RO:0002610"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_marker_for","termid":"RO:0002607"}


id: PBO:0087887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor encoded by the FYV5 antisense strand; negatively regulates transcription of FYV5 by binding to the promoter on the sense strand","termid":"PBO:0087887"}


id: GO:0038158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the cytokine granulocyte colony-stimulating factor (G-CSF) to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. G-CSF binds to the receptor (CSF3R).","definition_xrefs":["GOC:nhn","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"granulocyte colony-stimulating factor signaling pathway","synonyms":[{"name":"CSF3 signaling pathway","type":"exact"},{"name":"G-CSF receptor signaling pathway","type":"exact"},{"name":"G-CSF signaling pathway","type":"exact"},{"name":"granulocyte colony-stimulating factor receptor signaling pathway","type":"exact"},{"name":"granulocyte colony-stimulating factor signalling pathway","type":"related"}],"termid":"GO:0038158"}


id: GO:0043908
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of misacylated Ser-tRNA(Ala) and Gly-tRNA(Ala).","definition_xrefs":["GOC:jl","PMID:14663147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0140101","GO:0016788","GO:0140098","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"Ser(Gly)-tRNA(Ala) hydrolase activity","synonyms":[{"name":"Ser(Gly)-tRNAAla hydrolase activity","type":"exact"}],"termid":"GO:0043908"}


id: PBO:0090381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Sec15","termid":"PBO:0090381"}


id: PBO:0064620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 6 homeobox 2","termid":"PBO:0064620"}


id: GO:0010105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or prevents ethylene (ethene) signal transduction.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ethylene-activated signaling pathway","termid":"GO:0010104"},{"relation_name":"is_a","term_name":"negative regulation of phosphorelay signal transduction system","termid":"GO:0070298"},{"relation_name":"negatively_regulates","term_name":"ethylene-activated signaling pathway","termid":"GO:0009873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ethylene-activated signaling pathway","synonyms":[{"name":"down regulation of ethylene mediated signaling pathway","type":"exact"},{"name":"down-regulation of ethylene mediated signaling pathway","type":"exact"},{"name":"downregulation of ethylene mediated signaling pathway","type":"exact"},{"name":"inhibition of ethylene mediated signaling pathway","type":"narrow"},{"name":"negative regulation of ethene mediated signaling pathway","type":"exact"},{"name":"negative regulation of ethene mediated signalling pathway","type":"exact"},{"name":"negative regulation of ethylene mediated signaling pathway","type":"related"},{"name":"negative regulation of ethylene mediated signalling pathway","type":"exact"}],"termid":"GO:0010105"}


id: PBO:0070095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 9 pseudogene","termid":"PBO:0070095"}


id: PBO:0046620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 1, envelope","termid":"PBO:0046620"}


id: GO:0099186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a postsynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of synapse","termid":"GO:0098918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of postsynapse","termid":"GO:0099186"}


id: PR:Q09828
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A leucine--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.09","secondary_identifiers":["UniProtKB:Q09828"],"synonyms":[{"name":"LeuRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-LARS2","type":"exact"},{"name":"leucyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09828"}


id: GO:0043363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a myeloid precursor cell acquires specializes features of an erythrocyte with a nucleus, as found in non-mammalian vertebrates such as birds.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erythrocyte differentiation","termid":"GO:0030218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nucleate erythrocyte differentiation","synonyms":[{"name":"nucleate RBC differentiation","type":"exact"},{"name":"nucleate red blood cell differentiation","type":"exact"}],"termid":"GO:0043363"}


id: PBO:0058600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6732","termid":"PBO:0058600"}


id: PR:000049732
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proliferating cell nuclear antigen ubiquitinated form that has K63-linked Ub-Ub in Schizosaccharomyces pombe. Example: UniProtKB:Q03392, Lys-164, PR:000049733.","definition_xrefs":["PMID:27151298","PRO:CNA","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pcn1/Ubiq(K164)","termid":"PR:000044776"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pcn1/K63diUbiq(K164)","pombase_gene_id":"SPBC16D10.09","synonyms":[{"name":"K63-diubiquitinated PCNA (Schizosaccharomyces pombe)","type":"exact"},{"name":"PCNA diubiquitinated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"PomBase_original_PRO_term_name: proliferating cell nuclear antigen K63-diubiquitinated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-PCNA/K63diUbiq+","type":"exact"},{"name":"pcn1/K63diUbiq(K164)","type":"exact"}],"termid":"PR:000049732"}


id: PBO:0034774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex ATPase subunit Psm1/Smc1","termid":"PBO:0034774"}


id: GO:0097681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An instance of double-strand break repair via nonhomologous end joining that is independent of factors important for V(D)J recombination (as opposed to classical nonhomologous end joining). It often results in a deletion with microhomology (i.e. 5-25bp homology) at the repair junction. Among different subclasses of nonhomologous end joining (NHEJ), alternative NHEJ appears to play a significant role in the etiology of mutations that arise during cancer development and treatment.","definition_xrefs":["GOC:rph","PMID:18584027","PMID:21655080","Wikipedia:Microhomology-mediated_end_joining"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair via nonhomologous end joining","termid":"GO:0006303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"double-strand break repair via alternative nonhomologous end joining","synonyms":[{"name":"A-NHEJ","type":"related"},{"name":"MMEJ","type":"related"},{"name":"alt-NHEJ","type":"related"},{"name":"double-strand break repair via microhomology-mediated end joining","type":"exact"}],"termid":"GO:0097681"}


id: CHEBI:355715
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-nitrophenyl-beta-D-galactoside","termid":"CHEBI:355715"}


id: PBO:0087585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C); which is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; component of the catalytic core of the APC/C; has similarity to cullin Cdc53p","termid":"PBO:0087585"}


id: GO:1904037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epithelial cell apoptotic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:19137015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of epithelial cell apoptotic process","termid":"GO:1904035"},{"relation_name":"positively_regulates","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelial cell apoptotic process","synonyms":[{"name":"activation of epithelial cell apoptosis","type":"narrow"},{"name":"activation of epithelial cell apoptotic process","type":"narrow"},{"name":"activation of epitheliocyte apoptosis","type":"narrow"},{"name":"activation of epitheliocyte apoptotic process","type":"narrow"},{"name":"positive regulation of epithelial cell apoptosis","type":"narrow"},{"name":"positive regulation of epitheliocyte apoptosis","type":"narrow"},{"name":"positive regulation of epitheliocyte apoptotic process","type":"exact"},{"name":"up regulation of epithelial cell apoptosis","type":"narrow"},{"name":"up regulation of epithelial cell apoptotic process","type":"exact"},{"name":"up regulation of epitheliocyte apoptosis","type":"narrow"},{"name":"up regulation of epitheliocyte apoptotic process","type":"exact"},{"name":"up-regulation of epithelial cell apoptosis","type":"narrow"},{"name":"up-regulation of epithelial cell apoptotic process","type":"exact"},{"name":"up-regulation of epitheliocyte apoptosis","type":"narrow"},{"name":"up-regulation of epitheliocyte apoptotic process","type":"exact"},{"name":"upregulation of epithelial cell apoptosis","type":"narrow"},{"name":"upregulation of epithelial cell apoptotic process","type":"exact"},{"name":"upregulation of epitheliocyte apoptosis","type":"narrow"},{"name":"upregulation of epitheliocyte apoptotic process","type":"exact"}],"termid":"GO:1904037"}


id: GO:0001555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental growth process in which an oocyte irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present.","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"part_of","term_name":"oocyte development","termid":"GO:0048599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte growth","termid":"GO:0001555"}


id: PBO:0056937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7-2","termid":"PBO:0056937"}


id: GO:0034686
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alphav subunit and one beta8 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"integrin alphav-beta8 complex","synonyms":[{"name":"ITGAV-ITGB8 complex","type":"narrow"},{"name":"alphav-beta8 integrin complex","type":"exact"}],"termid":"GO:0034686"}


id: GO:0015701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of bicarbonate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"bicarbonate transport","synonyms":[{"name":"hydrogencarbonate transport","type":"exact"}],"termid":"GO:0015701"}


id: GO:0051028
data:
  {"annotated_genes":["SJAG_04379","SJAG_04589","SJAG_01529","SJAG_02209","SJAG_04645","SJAG_03002","SJAG_01467","SJAG_03986","SJAG_05328","SJAG_00093","SJAG_03593","SJAG_00992","SJAG_04115","SJAG_03300","SJAG_00641","SJAG_04472","SJAG_03283","SJAG_01065","SJAG_04202","SJAG_04656","SJAG_01584","SJAG_01185","SJAG_04017","SJAG_00471","SJAG_04480","SJAG_02534","SJAG_04148","SJAG_02425","SJAG_00298","SJAG_01449","SJAG_03847","SJAG_01652","SJAG_00375","SJAG_04310","SJAG_04347","SJAG_04536","SJAG_03693","SJAG_01083","SJAG_02704","SJAG_01715","SJAG_00178","SJAG_01374","SJAG_04721"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57984,59219,63921],"is_not":false,"summary":null,"term":"GO:0051028"},{"annotations":[97222,101446,99074,100024,93173,110972,113479,111596,113350,85073,86677,85559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006406"},{"annotations":[112509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[111597,101807,107196,112404,100025,68984,102226,112141,97936,109330,93022,115017,107829,103706,88250,104765,98823,98726,111884,105927,114099,92609,112659,110536,97462,112511,111070,98036,106499,87015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016973"}]},"cv_name":"biological_process","definition":"The directed movement of mRNA, messenger ribonucleic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transport","termid":"GO:0050658"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00375":null,"SJAG_00471":null,"SJAG_00641":null,"SJAG_00992":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01467":null,"SJAG_01529":null,"SJAG_01584":null,"SJAG_01652":null,"SJAG_01715":null,"SJAG_02209":null,"SJAG_02425":null,"SJAG_02534":null,"SJAG_02704":null,"SJAG_03002":null,"SJAG_03283":null,"SJAG_03300":null,"SJAG_03593":null,"SJAG_03693":null,"SJAG_03847":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04115":null,"SJAG_04148":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04347":null,"SJAG_04379":null,"SJAG_04472":null,"SJAG_04480":null,"SJAG_04536":null,"SJAG_04589":null,"SJAG_04645":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mRNA transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0051028","terms_by_termid":{"GO:0006406":null,"GO:0016973":null,"GO:0031990":null,"GO:0051028":null}}


id: PBO:0033798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0033798"}


id: PBO:0025546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase PP2A regulatory subunit B-56 Par1","termid":"PBO:0025546"}


id: PBO:0061408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroplastin","termid":"PBO:0061408"}


id: GO:0016677
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a heme group acts as a hydrogen or electron donor and reduces a nitrogenous group.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a heme group of donors","termid":"GO:0016675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on a heme group of donors, nitrogenous group as acceptor","secondary_identifiers":["EC:1.9.6.-"],"synonyms":[{"name":"oxidoreductase activity, acting on haem group of donors, nitrogenous group as acceptor","type":"exact"}],"termid":"GO:0016677"}


id: PBO:0073720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Src like adaptor 2","termid":"PBO:0073720"}


id: PR:Q10280
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gaf1 gene.","definition_xrefs":["UniProtKB:Q10280","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor gaf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1902.01","synonyms":[{"name":"Gaf-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gaf1","type":"exact"}],"termid":"PR:Q10280"}


id: PBO:0081745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 675","termid":"PBO:0081745"}


id: PBO:0077702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"troponin C1, slow skeletal and cardiac type","termid":"PBO:0077702"}


id: PBO:0069444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 709, pseudogene","termid":"PBO:0069444"}


id: GO:0003881
data:
  {"annotated_genes":["SJAG_00999"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88206],"is_not":false,"summary":null,"term":"GO:0003881"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: myo-inositol + CDP-diacylglycerol = 1-phosphatidyl-1D-myo-inositol + CMP + H+.","definition_xrefs":["RHEA:11580","EC:2.7.8.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDP-alcohol phosphatidyltransferase activity","termid":"GO:0017169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0003824","GO:0016780","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1482976","KEGG_REACTION:R01802","MetaCyc:2.7.8.11-RXN"],"synonyms":[{"name":"CDP diglyceride-inositol phosphatidyltransferase activity","type":"related"},{"name":"CDP-DG:inositol transferase activity","type":"related"},{"name":"CDP-diacylglycerol--inositol phosphatidyltransferase activity","type":"related"},{"name":"CDP-diacylglycerol:myo-inositol 3-phosphatidyltransferase activity","type":"related"},{"name":"CDP-diacylglycerol:myo-inositol-3-phosphatidyltransferase activity","type":"related"},{"name":"CDP-diglyceride-inositol transferase activity","type":"related"},{"name":"CDP-diglyceride:inositol transferase activity","type":"related"},{"name":"CDPdiacylglycerol-inositol 3-phosphatidyltransferase activity","type":"related"},{"name":"cytidine 5'-diphospho-1,2-diacyl-sn-glycerol:myo-inositol 3-phosphatidyltransferase activity","type":"related"},{"name":"cytidine diphosphodiglyceride-inositol phosphatidyltransferase activity","type":"related"},{"name":"cytidine diphosphoglyceride-inositol phosphatidyltransferase activity","type":"related"},{"name":"cytidine diphosphoglyceride-inositol transferase activity","type":"related"},{"name":"phosphatidylinositol synthase activity","type":"exact"}],"termid":"GO:0003881","terms_by_termid":{"GO:0003881":null}}


id: PBO:0065189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prospero homeobox 2","termid":"PBO:0065189"}


id: PBO:0068949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 193, pseudogene","termid":"PBO:0068949"}


id: FYPO:0002532
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm","termid":"FYPO:0002529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"delayed onset of protein localization to nucleoplasm","synonyms":[{"name":"delayed onset of protein localisation to nucleoplasm","type":"exact"},{"name":"delayed onset of protein localization to nucleoplasm during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to nucleoplasm during vegetative growth","type":"exact"},{"name":"delayed protein localization to nucleoplasm","type":"exact"}],"termid":"FYPO:0002532"}


id: GO:0016848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the breakage of a bond between carbon and any halogen atom.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"carbon-halide lyase activity","secondary_identifiers":["EC:4.5.-.-"],"termid":"GO:0016848"}


id: GO:0097547
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cytoplasmic vesicle composed of both tubulovesicular and clear core vesicles that transport synaptic vesicle-associated proteins. Proteins carried by synaptic vesicle protein transport vesicles (STVs) include synaptophysin, synapsin Ia, synaptotagmin and synaptobrevin/vesicle-associated membrane protein 2 (VAMP2). STVs are packaged via the trans-Golgi network before being transported through the axon.","definition_xrefs":["GOC:dr","PMID:21569270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"synaptic vesicle protein transport vesicle","synonyms":[{"name":"STV","type":"exact"}],"termid":"GO:0097547"}


id: PBO:0084857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; protein abundance increases in response to DNA replication stress","termid":"PBO:0084857"}


id: PBO:0053379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 305","termid":"PBO:0053379"}


id: GO:0034223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of ascospore wall chitin.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ascospore wall chitin biosynthetic process (obsolete GO:0034223)","synonyms":[{"name":"regulation of ascospore wall chitin anabolism","type":"exact"},{"name":"regulation of ascospore wall chitin biosynthesis","type":"exact"},{"name":"regulation of ascospore wall chitin formation","type":"exact"},{"name":"regulation of ascospore wall chitin synthesis","type":"exact"}],"termid":"GO:0034223"}


id: PBO:0109835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTT co-chaperone complex subunit Tti2","termid":"PBO:0109835"}


id: PBO:0031327
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_copper","termid":"PBO:0031327"}


id: PBO:0088439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis factor recycling AAA family ATPase","termid":"PBO:0088439"}


id: PR:Q9P6N6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A solute carrier family 25 member 38 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 38 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.10c","secondary_identifiers":["UniProtKB:Q9P6N6"],"synonyms":[{"name":"Spom972h-SLC25A38","type":"exact"}],"termid":"PR:Q9P6N6"}


id: PBO:0027436
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_nonsense-mediated_decay","termid":"PBO:0027436"}


id: PBO:0068883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 123, pseudogene","termid":"PBO:0068883"}


id: GO:0045095
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A filament composed of acidic and basic keratins (types I and II), typically expressed in epithelial cells. The keratins are the most diverse classes of IF proteins, with a large number of keratin isoforms being expressed. Each type of epithelium always expresses a characteristic combination of type I and type II keratins.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intermediate filament","termid":"GO:0005882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"keratin filament","synonyms":[{"name":"acidic keratin","type":"related"},{"name":"basic/neutral keratin","type":"related"}],"termid":"GO:0045095"}


id: PBO:0068094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 401","termid":"PBO:0068094"}


id: GO:0034730
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SMN-Sm protein complex formed by the association of the methylated Sm proteins B/B', D1, D2, D3, E, F, and G with the SMN complex.","definition_xrefs":["PMID:12975319","PMID:17401408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SMN-Sm protein complex","termid":"GO:0034719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"SmD-containing SMN-Sm protein complex","synonyms":[{"name":"SMN-containing protein complex","type":"broad"}],"termid":"GO:0034730"}


id: PATO:0001577
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A permeability which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"permeable","termid":"PATO:0000982"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased permeability","synonyms":[{"name":"high permeability","type":"exact"}],"termid":"PATO:0001577"}


id: PBO:0069886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1175, pseudogene","termid":"PBO:0069886"}


id: PBO:0073414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 20","termid":"PBO:0073414"}


id: GO:1904300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcytosis.","definition_xrefs":["PMID:9664076","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of transcytosis","termid":"GO:1904298"},{"relation_name":"positively_regulates","term_name":"transcytosis","termid":"GO:0045056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"positive regulation of transcytosis","synonyms":[{"name":"activation of transcytosis","type":"narrow"},{"name":"up regulation of transcytosis","type":"exact"},{"name":"up-regulation of transcytosis","type":"exact"},{"name":"upregulation of transcytosis","type":"exact"}],"termid":"GO:1904300"}


id: PBO:0080982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 17","termid":"PBO:0080982"}


id: PATO:0001999
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The bearer of this quality has_part < n of the indicated entity type, where n is the normal amount for a comparable organism. Note that the bearer of the quality is the whole, not the part. Formally: If a bearer entity e has fewer parts of type X at time t, then the number of instances x of X at t such that x part_of e is < n, where n is either the normal number for comparable entities, or n is stated explicitly. This case includes the limit case, where the bearer lacks all parts of the specified type.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered number of","termid":"PATO:0002083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lacks parts or has fewer parts of type","synonyms":[{"name":"loss of","type":"exact"}],"termid":"PATO:0001999"}


id: PBO:0054433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1829","termid":"PBO:0054433"}


id: PBO:0018001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase I, ubiquitin ligase F-box adaptor Fbh1","termid":"PBO:0018001"}


id: PBO:0054226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1608","termid":"PBO:0054226"}


id: GO:0016309
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1-phosphatidyl-1D-myo-inositol 5-phosphate + ATP = a 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + ADP + H+.","definition_xrefs":["EC:2.7.1.149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol kinase activity","termid":"GO:0052742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"1-phosphatidylinositol-5-phosphate 4-kinase activity","secondary_identifiers":["Reactome:R-HSA-1675776","Reactome:R-HSA-6811522","RHEA:12280","MetaCyc:2.7.1.149-RXN"],"synonyms":[{"name":"1-phosphatidylinositol-5-phosphate kinase","type":"broad"},{"name":"ATP:1-phosphatidyl-1D-myo-inositol-5-phosphate 4-phosphotransferase activity","type":"related"},{"name":"PIP4K","type":"exact"},{"name":"type II PIP kinase activity","type":"narrow"}],"termid":"GO:0016309"}


id: GO:0004467
data:
  {"annotated_genes":["SJAG_03909","SJAG_03471"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101664,109506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090432"},{"annotations":[101665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090434"},{"annotations":[101666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090433"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain fatty acid + ATP + CoA = a long-chain fatty acyl-CoA + AMP + diphosphate. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["RHEA:15421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid-CoA ligase activity","termid":"GO:0120515"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03471":null,"SJAG_03909":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"long-chain fatty acid-CoA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:6.2.1.3","Reactome:R-HSA-193401","Reactome:R-HSA-193727","Reactome:R-HSA-159425","Reactome:R-HSA-192137","MetaCyc:RXN-7904","Reactome:R-HSA-193743","Reactome:R-HSA-201035","Reactome:R-HSA-2046085","MetaCyc:PWY-5143","Reactome:R-HSA-2046098","Reactome:R-HSA-9734535","Reactome:R-HSA-5696004","Reactome:R-HSA-193766","Reactome:R-HSA-548843","Reactome:R-HSA-193424","Reactome:R-HSA-193711","GO:0003996","Reactome:R-HSA-193407"],"synonyms":[{"name":"LCFA synthetase activity","type":"related"},{"name":"acyl-CoA ligase activity","type":"related"},{"name":"acyl-CoA synthetase activity","type":"related"},{"name":"acyl-activating enzyme activity","type":"broad"},{"name":"fatty acid thiokinase (long-chain) activity","type":"related"},{"name":"lignoceroyl-CoA synthase activity","type":"related"},{"name":"long chain fatty acyl-CoA synthetase activity","type":"related"},{"name":"long-chain acyl CoA synthetase activity","type":"related"},{"name":"long-chain acyl-CoA synthetase activity","type":"exact"},{"name":"long-chain acyl-coenzyme A synthetase activity","type":"related"},{"name":"long-chain fatty acid activation","type":"related"},{"name":"long-chain fatty acyl coenzyme A synthetase activity","type":"related"},{"name":"long-chain-fatty-acid-CoA ligase activity","type":"exact"},{"name":"long-chain-fatty-acyl-CoA synthetase activity","type":"exact"},{"name":"pristanoyl-CoA synthetase","type":"narrow"},{"name":"stearoyl-CoA synthetase","type":"narrow"},{"name":"thiokinase","type":"related"}],"termid":"GO:0004467","terms_by_termid":{"GO:0090432":null,"GO:0090433":null,"GO:0090434":null}}


id: GO:0150094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which amyloid-beta is removed from extracellular brain regions by cell surface receptor-mediated endocytosis, followed by intracellular degradation.","definition_xrefs":["GOC:aruk","PMID:18289866","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"},{"relation_name":"is_a","term_name":"amyloid-beta clearance","termid":"GO:0097242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"amyloid-beta clearance by cellular catabolic process","synonyms":[{"name":"amyloid-beta clearance by phagocytosis","type":"narrow"}],"termid":"GO:0150094"}


id: PBO:0075099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 148","termid":"PBO:0075099"}


id: FYPO:0004807
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which the cell is narrower than normal at the point where cell fusion occurred during mating. Normally, the cell expands at the fusion site after fusion takes place.","definition_xrefs":["PMID:25825517","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"narrow cell fusion site following mating","synonyms":[{"name":"narrow cell fusion site following conjugation","type":"exact"},{"name":"narrow cell fusion site following conjugation with cellular fusion","type":"exact"},{"name":"narrow cell-cell fusion site following conjugation with cellular fusion","type":"exact"}],"termid":"FYPO:0004807"}


id: PBO:0042504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDH23 antisense RNA 1","termid":"PBO:0042504"}


id: PATO:0000387
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A hardness quality of giving little resistance to pressure.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"hardness","termid":"PATO:0000048"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"soft","termid":"PATO:0000387"}


id: PBO:0080437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS53 subunit of GARP complex","termid":"PBO:0080437"}


id: GO:0102393
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: FAD + H+ + a decanoyl-HmqF protein = FADH2(2-) + a 2,3-dehydro-decanoyl-HmqF.","definition_xrefs":["EC:1.3.8.-","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete decanoyl-[acp] 2-dehydrogenase activity (obsolete GO:0102393)","termid":"GO:0102393"}


id: GO:0061719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucose into pyruvate, with the concomitant production of a small amount of ATP and the utilization of ADP in the initial kinase reactions.","definition_xrefs":["MetaCyc:P341-PWY","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"},{"relation_name":"is_a","term_name":"glucose catabolic process to pyruvate","termid":"GO:0061718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"glucose catabolic process to pyruvate utilizing ADP","termid":"GO:0061719"}


id: PBO:0084290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral subunit of SAGA histone acetyltransferase complex; regulates transcription of a subset of SAGA-regulated genes, required for the Ubp8p association with SAGA and for H2B deubiquitylation","termid":"PBO:0084290"}


id: PR:Q9UU94
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- epl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UU94"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of polycomb-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC830.05c","synonyms":[{"name":"Spom972h-epl1","type":"exact"}],"termid":"PR:Q9UU94"}


id: PBO:0042398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"codanin 1","termid":"PBO:0042398"}


id: GO:0043724
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-keto-3-deoxygalactonate = D-glyceraldehyde + pyruvate.","definition_xrefs":["PMID:12824170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"2-keto-3-deoxygalactonate aldolase activity","synonyms":[{"name":"KDGal aldolase activity","type":"exact"}],"termid":"GO:0043724"}


id: PBO:0042170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular communication network factor 1","termid":"PBO:0042170"}


id: FYPO:0003981
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione transferase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal glutathione transferase activity","termid":"FYPO:0003980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"increased glutathione transferase activity","termid":"FYPO:0003981"}


id: GO:0106313
data:
  {"annotated_genes":["SJAG_03712","SJAG_01466"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92719,94485],"is_not":false,"summary":null,"term":"GO:0106313"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (6S)-5-methyl-5,6,7,8-tetrahydrofolate + NADP+ = (6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + NADPH + H+.","definition_xrefs":["RHEA:19817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylenetetrahydrofolate reductase (NAD(P)H) activity","termid":"GO:0004489"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01466":null,"SJAG_03712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"methylenetetrahydrofolate reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.5.1.53","MetaCyc:RXN-21991"],"termid":"GO:0106313","terms_by_termid":{"GO:0106313":null}}


id: PR:O14013
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrn5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I-specific transcription initiation factor rrn5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.10","synonyms":[{"name":"Spom972h-rrn5","type":"exact"}],"termid":"PR:O14013"}


id: GO:1901544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ent-pimara-8(14),15-diene biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of isoprenoid metabolic process","termid":"GO:0045828"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"regulation of ent-pimara-8(14),15-diene biosynthetic process","termid":"GO:1901542"},{"relation_name":"positively_regulates","term_name":"ent-pimara-8(14),15-diene biosynthetic process","termid":"GO:1901541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ent-pimara-8(14),15-diene biosynthetic process","synonyms":[{"name":"activation of ent-pimara-8(14),15-diene anabolism","type":"narrow"},{"name":"activation of ent-pimara-8(14),15-diene biosynthesis","type":"narrow"},{"name":"activation of ent-pimara-8(14),15-diene biosynthetic process","type":"narrow"},{"name":"activation of ent-pimara-8(14),15-diene formation","type":"narrow"},{"name":"activation of ent-pimara-8(14),15-diene synthesis","type":"narrow"},{"name":"positive regulation of ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"positive regulation of ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"positive regulation of ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"positive regulation of ent-pimara-8(14),15-diene synthesis","type":"exact"},{"name":"up regulation of ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"up regulation of ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"up regulation of ent-pimara-8(14),15-diene biosynthetic process","type":"exact"},{"name":"up regulation of ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"up regulation of ent-pimara-8(14),15-diene synthesis","type":"exact"},{"name":"up-regulation of ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"up-regulation of ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"up-regulation of ent-pimara-8(14),15-diene biosynthetic process","type":"exact"},{"name":"up-regulation of ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"up-regulation of ent-pimara-8(14),15-diene synthesis","type":"exact"},{"name":"upregulation of ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"upregulation of ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"upregulation of ent-pimara-8(14),15-diene biosynthetic process","type":"exact"},{"name":"upregulation of ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"upregulation of ent-pimara-8(14),15-diene synthesis","type":"exact"}],"termid":"GO:1901544"}


id: PBO:0049143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase pseudogene 1","termid":"PBO:0049143"}


id: PBO:0065239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 13 pseudogene 7","termid":"PBO:0065239"}


id: PBO:0083508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF CDC7/YDL153C, the catalytic subunit of a complex that regulates DNA replication","termid":"PBO:0083508"}


id: GO:1904210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a VCP-NPL4-UFD1 AAA ATPase complex.","definition_xrefs":["GOC:TermGenie","PMID:17000876","GOC:PARL","GOC:bf","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"VCP-NPL4-UFD1 AAA ATPase complex assembly","synonyms":[{"name":"Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"p97-Ufd1-Npl4 complex formation","type":"exact"}],"termid":"GO:1904210"}


id: GO:0043175
data:
  {"annotated_genes":["SJAG_01744","SJAG_02203","SJAG_04933","SJAG_02691","SJAG_02898","SJAG_01610","SJAG_00483","SJAG_00448","SJAG_04353","SJAG_01707","SJAG_03118","SJAG_01151","SJAG_00139"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66499],"is_not":false,"summary":null,"term":"GO:0043175"},{"annotations":[70531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001042"},{"annotations":[64414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099122"},{"annotations":[71446,76902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"},{"annotations":[75076,77486,70131,77467,71390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000993"},{"annotations":[77151,75353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001139"},{"annotations":[72585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000994"}]},"cv_name":"molecular_function","definition":"Binding to an RNA polymerase core enzyme, containing a specific subunit composition defined as the core enzyme.","definition_xrefs":["GOC:txnOH","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase binding","termid":"GO:0070063"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00139":null,"SJAG_00448":null,"SJAG_00483":null,"SJAG_01151":null,"SJAG_01610":null,"SJAG_01707":null,"SJAG_01744":null,"SJAG_02203":null,"SJAG_02691":null,"SJAG_02898":null,"SJAG_03118":null,"SJAG_04353":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"RNA polymerase core enzyme binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0043175","terms_by_termid":{"GO:0000993":null,"GO:0000994":null,"GO:0001042":null,"GO:0001139":null,"GO:0043175":null,"GO:0099122":null,"GO:1990269":null}}


id: PBO:0043758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 8B, pseudogene","termid":"PBO:0043758"}


id: PBO:0002156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fork head domain","termid":"PBO:0002156"}


id: PBO:0091402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S12","termid":"PBO:0091402"}


id: GO:0015138
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of fumarate from one side of a membrane to the other. Fumarate is a key intermediate in metabolism and is formed in the TCA cycle from succinate and converted into malate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"},{"relation_name":"is_a","term_name":"C4-dicarboxylate transmembrane transporter activity","termid":"GO:0015556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"fumarate transmembrane transporter activity","synonyms":[{"name":"dicarboxylate (succinate/fumarate/malate) antiporter activity","type":"related"}],"termid":"GO:0015138"}


id: GO:0102111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A20 + 2-oxoglutarate + O2 = gibberellin A29 + succinate + carbon dioxide.","definition_xrefs":["GOC:pz","EC:1.14.11.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"gibberellin A20,2-oxoglutarate:oxygen oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-113"],"termid":"GO:0102111"}


id: PBO:0065931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac family small GTPase 1 pseudogene 5","termid":"PBO:0065931"}


id: PBO:0005399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent FMN reductase (predicted)","termid":"PBO:0005399"}


id: PBO:0036487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP, GTPase activating protein Rga1","termid":"PBO:0036487"}


id: PBO:0052913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 13-5, pseudogene","termid":"PBO:0052913"}


id: PBO:0062000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily G member 3","termid":"PBO:0062000"}


id: PR:Q9P7X1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial-processing peptidase subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11851:SF58","PRO:DNx","OMA:SCHPO03098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial-processing peptidase subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.15c","secondary_identifiers":["UniProtKB:Q9P7X1"],"synonyms":[{"name":"PEP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PMPCB","type":"exact"},{"name":"beta-MPP (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7X1"}


id: GO:0006402
data:
  {"annotated_genes":["SJAG_04825","SJAG_04640","SJAG_03745","SJAG_00425","SJAG_01191","SJAG_00456","SJAG_02275","SJAG_00961","SJAG_03696","SJAG_05694","SJAG_04153","SJAG_04946","SJAG_04500","SJAG_03448","SJAG_04283","SJAG_01331","SJAG_02601","SJAG_03223","SJAG_01818","SJAG_00285","SJAG_02036","SJAG_04198","SJAG_03179","SJAG_04056","SJAG_00452","SJAG_00686","SJAG_00759","SJAG_04291","SJAG_04527","SJAG_02239","SJAG_02720","SJAG_00507","SJAG_03113","SJAG_01218","SJAG_01830","SJAG_04025","SJAG_05243","SJAG_04682","SJAG_01625","SJAG_03805","SJAG_00226","SJAG_01540","SJAG_01867","SJAG_04768","SJAG_03234","SJAG_00966","SJAG_01910","SJAG_03466","SJAG_01822","SJAG_00797","SJAG_04880","SJAG_03283","SJAG_02382","SJAG_02540","SJAG_02723","SJAG_01843","SJAG_02879","SJAG_01053","SJAG_04350","SJAG_02383","SJAG_03276","SJAG_03952","SJAG_03597","SJAG_00670","SJAG_02374","SJAG_04006","SJAG_02808","SJAG_03883","SJAG_03023","SJAG_01431","SJAG_16457","SJAG_04427","SJAG_03984","SJAG_00854","SJAG_02573","SJAG_04118","SJAG_01252","SJAG_00391","SJAG_02370","SJAG_02213","SJAG_00343","SJAG_01936","SJAG_05014","SJAG_04824","SJAG_01944","SJAG_03454","SJAG_01436","SJAG_04407","SJAG_05276","SJAG_03132","SJAG_05322","SJAG_02622","SJAG_05010","SJAG_04601","SJAG_04321","SJAG_04818","SJAG_01412","SJAG_05240","SJAG_04360","SJAG_01521","SJAG_02005","SJAG_03070","SJAG_03706","SJAG_03157","SJAG_04084","SJAG_03876","SJAG_03886"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110932,113998],"is_not":false,"summary":null,"term":"GO:0006402"},{"annotations":[114399],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0061158"},{"annotations":[114400,77567,96161,86263],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0070935"},{"annotations":[87609,108079,102197,105953,106002,109559],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0000290"},{"annotations":[88607,101642],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031087"},{"annotations":[88299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071044"},{"annotations":[114188],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0061157"},{"annotations":[85560,92326],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0048255"},{"annotations":[85561,85157],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902373"},{"annotations":[85863],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0120271"},{"annotations":[111967,85522,102526,114386,100474,98151,91026,89132,97108,91986,101321,111527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071028"},{"annotations":[114190,103524,93320,89507,109347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071031"},{"annotations":[112421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071032"},{"annotations":[88423,105323,105855,114191,84914,102369,83567,86859,91070,111632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071030"},{"annotations":[102527,91987,98152,100475,103525,114387,101322,89133,93321,111968,111528,88303],"is_not":false,"rel_names":["positively_regulates","is_a","regulates"],"summary":null,"term":"GO:0071042"},{"annotations":[104608,112500,100973,87754,91698,107329,111411,98246,91027,98597,105955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000956"},{"annotations":[112239,114389,101324,102529,111970,87580,103528,91989,100477,93324,104894,84831,97309,85875,113317,98154,89135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070478"},{"annotations":[85774,74092,94126,70298,95992,109409,70737,107146,71458,94212,111227,76366],"is_not":false,"rel_names":["positively_regulates","regulates","is_a"],"summary":null,"term":"GO:0000288"},{"annotations":[86934,103529,105324,86860,100380,92801,87920,83568,114194,105304,107378,95162,88307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033621"},{"annotations":[110186,112115,103245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070966"},{"annotations":[103530,104895,112116,102530,98155,114390,89136,112240,101325,113318,97310,100478,91990,93325,111971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070481"},{"annotations":[101951,85980,87581,85876,95842,111460,86383,109663,100825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000184"},{"annotations":[100841,92573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000294"},{"annotations":[86850,113255,88652,91581,88050,89471,94582,105270,85864,88557,90404,99108,111741,112698,87991],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0000289"},{"annotations":[87727],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"},{"annotations":[91699],"is_not":false,"rel_names":["is_a","regulates","positively_regulates"],"summary":null,"term":"GO:1990074"},{"annotations":[102718],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0120272"},{"annotations":[85775,97077,100975],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0060213"},{"annotations":[112721],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0061013"},{"annotations":[84485,113374],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043488"},{"annotations":[85877,87582,86266],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000815"},{"annotations":[94583],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0060211"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mRNA, messenger RNA, which is responsible for carrying the coded genetic 'message', transcribed from DNA, to sites of protein assembly at the ribosomes.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"},{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"mRNA metabolic process","termid":"GO:0016071"}],"gene_count":107,"genes_by_uniquename":{"SJAG_00226":null,"SJAG_00285":null,"SJAG_00343":null,"SJAG_00391":null,"SJAG_00425":null,"SJAG_00452":null,"SJAG_00456":null,"SJAG_00507":null,"SJAG_00670":null,"SJAG_00686":null,"SJAG_00759":null,"SJAG_00797":null,"SJAG_00854":null,"SJAG_00961":null,"SJAG_00966":null,"SJAG_01053":null,"SJAG_01191":null,"SJAG_01218":null,"SJAG_01252":null,"SJAG_01331":null,"SJAG_01412":null,"SJAG_01431":null,"SJAG_01436":null,"SJAG_01521":null,"SJAG_01540":null,"SJAG_01625":null,"SJAG_01818":null,"SJAG_01822":null,"SJAG_01830":null,"SJAG_01843":null,"SJAG_01867":null,"SJAG_01910":null,"SJAG_01936":null,"SJAG_01944":null,"SJAG_02005":null,"SJAG_02036":null,"SJAG_02213":null,"SJAG_02239":null,"SJAG_02275":null,"SJAG_02370":null,"SJAG_02374":null,"SJAG_02382":null,"SJAG_02383":null,"SJAG_02540":null,"SJAG_02573":null,"SJAG_02601":null,"SJAG_02622":null,"SJAG_02720":null,"SJAG_02723":null,"SJAG_02808":null,"SJAG_02879":null,"SJAG_03023":null,"SJAG_03070":null,"SJAG_03113":null,"SJAG_03132":null,"SJAG_03157":null,"SJAG_03179":null,"SJAG_03223":null,"SJAG_03234":null,"SJAG_03276":null,"SJAG_03283":null,"SJAG_03448":null,"SJAG_03454":null,"SJAG_03466":null,"SJAG_03597":null,"SJAG_03696":null,"SJAG_03706":null,"SJAG_03745":null,"SJAG_03805":null,"SJAG_03876":null,"SJAG_03883":null,"SJAG_03886":null,"SJAG_03952":null,"SJAG_03984":null,"SJAG_04006":null,"SJAG_04025":null,"SJAG_04056":null,"SJAG_04084":null,"SJAG_04118":null,"SJAG_04153":null,"SJAG_04198":null,"SJAG_04283":null,"SJAG_04291":null,"SJAG_04321":null,"SJAG_04350":null,"SJAG_04360":null,"SJAG_04407":null,"SJAG_04427":null,"SJAG_04500":null,"SJAG_04527":null,"SJAG_04601":null,"SJAG_04640":null,"SJAG_04682":null,"SJAG_04768":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04825":null,"SJAG_04880":null,"SJAG_04946":null,"SJAG_05010":null,"SJAG_05014":null,"SJAG_05240":null,"SJAG_05243":null,"SJAG_05276":null,"SJAG_05322":null,"SJAG_05694":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"mRNA catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mRNA breakdown","type":"exact"},{"name":"mRNA catabolism","type":"exact"},{"name":"mRNA decay","type":"related"},{"name":"mRNA degradation","type":"exact"}],"termid":"GO:0006402","terms_by_termid":{"GO:0000184":null,"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0000294":null,"GO:0000956":null,"GO:0006402":null,"GO:0031087":null,"GO:0033621":null,"GO:0036450":null,"GO:0043488":null,"GO:0048255":null,"GO:0060211":null,"GO:0060213":null,"GO:0061013":null,"GO:0061157":null,"GO:0061158":null,"GO:0070478":null,"GO:0070481":null,"GO:0070935":null,"GO:0070966":null,"GO:0071028":null,"GO:0071030":null,"GO:0071031":null,"GO:0071032":null,"GO:0071042":null,"GO:0071044":null,"GO:0120271":null,"GO:0120272":null,"GO:1902373":null,"GO:1990074":null,"GO:2000815":null}}


id: PR:Q09746
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An F-BAR and double SH3 domains protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein BZZ1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12C2.05c","secondary_identifiers":["UniProtKB:Q09746"],"synonyms":[{"name":"SPBC12C2.05c","type":"related"},{"name":"Spom972h-FCHSD1","type":"exact"}],"termid":"PR:Q09746"}


id: PBO:0055233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2660","termid":"PBO:0055233"}


id: GO:0038103
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting with an activin receptor to reduce the action of the agonist nodal. A receptor antagonist does not initiate signaling upon binding to a receptor, but instead blocks an agonist from binding to the receptor.","definition_xrefs":["GOC:signaling","PMID:15062104"],"gene_count":0,"genotype_count":0,"name":"obsolete activin receptor antagonist activity involved in negative regulation of nodal signaling pathway (obsolete GO:0038103)","synonyms":[{"name":"activin receptor antagonist activity involved in negative regulation of nodal signalling pathway","type":"exact"},{"name":"nodal antagonist activity","type":"exact"}],"termid":"GO:0038103"}


id: GO:0090112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which COPII vesicle coat proteins are disassembled, and released.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle uncoating","termid":"GO:0072319"},{"relation_name":"part_of","term_name":"endoplasmic reticulum to Golgi vesicle-mediated transport","termid":"GO:0006888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"COPII vesicle uncoating","termid":"GO:0090112"}


id: GO:0070029
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphav-beta3 integrin complex bound to osteopontin.","definition_xrefs":["PMID:7532190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alphav-beta3 integrin-osteopontin complex","synonyms":[{"name":"ITGAV-ITGB3-SPP1 complex","type":"narrow"}],"termid":"GO:0070029"}


id: PBO:0063989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 23","termid":"PBO:0063989"}


id: PBO:0089134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"client-loading PAQosome cofactor","termid":"PBO:0089134"}


id: PBO:0059980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 25","termid":"PBO:0059980"}


id: PBO:0109230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF7 pseudogene 1","termid":"PBO:0109230"}


id: PBO:0080163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variable charge Y-linked","termid":"PBO:0080163"}


id: FYPO:0002563
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nuclear periphery is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to nuclear periphery","synonyms":[{"name":"normal protein localisation to nuclear periphery","type":"exact"},{"name":"normal protein localization to nuclear periphery during mitotic cell cycle","type":"related"},{"name":"normal protein localization to nuclear periphery during vegetative growth","type":"exact"}],"termid":"FYPO:0002563"}


id: PBO:0088248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose 5-phosphate isomerase Rki1","termid":"PBO:0088248"}


id: PBO:0043992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate N-acetylgalactosaminyltransferase 2","termid":"PBO:0043992"}


id: GO:1905884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of triglyceride transport.","definition_xrefs":["GOC:TermGenie","PMID:25849533","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of acylglycerol transport","termid":"GO:1901507"},{"relation_name":"is_a","term_name":"regulation of triglyceride transport","termid":"GO:1905883"},{"relation_name":"negatively_regulates","term_name":"triglyceride transport","termid":"GO:0034197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of triglyceride transport","synonyms":[{"name":"down regulation of triacylglycerol transport","type":"exact"},{"name":"down regulation of triglyceride transport","type":"exact"},{"name":"down-regulation of triacylglycerol transport","type":"exact"},{"name":"down-regulation of triglyceride transport","type":"exact"},{"name":"downregulation of triacylglycerol transport","type":"exact"},{"name":"downregulation of triglyceride transport","type":"exact"},{"name":"inhibition of triacylglycerol transport","type":"narrow"},{"name":"inhibition of triglyceride transport","type":"narrow"},{"name":"negative regulation of triacylglycerol transport","type":"exact"}],"termid":"GO:1905884"}


id: GO:0000145
data:
  {"annotated_genes":["SJAG_02166","SJAG_04044","SJAG_04960","SJAG_03864","SJAG_01925","SJAG_03938","SJAG_02320","SJAG_02753","SJAG_03357"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84698,86813,95613,97988,109951,110233,111725,113809,114919],"is_not":false,"summary":null,"term":"GO:0000145"}]},"cv_name":"cellular_component","definition":"A protein complex peripherally associated with the plasma membrane that determines where vesicles dock and fuse. At least eight complex components are conserved between yeast and mammals.","definition_xrefs":["PMID:27243008","GOC:cilia","PMID:15292201","PMID:9700152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle tethering complex","termid":"GO:0099023"},{"relation_name":"part_of","term_name":"cell cortex","termid":"GO:0005938"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01925":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_02753":null,"SJAG_03357":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_04044":null,"SJAG_04960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005938","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"exocyst","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Exocyst"],"synonyms":[{"name":"Sec6/8 complex","type":"exact"},{"name":"exocyst complex","type":"exact"}],"termid":"GO:0000145","terms_by_termid":{"GO:0000145":null}}


id: PBO:0040096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosyltransferase 2, pseudogene","termid":"PBO:0040096"}


id: GO:0050553
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-geranylgeranyl diphosphate = diphosphate + taxa-4,11-diene.","definition_xrefs":["RHEA:20912","EC:4.2.3.17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"taxadiene synthase activity","secondary_identifiers":["MetaCyc:4.2.3.17-RXN","KEGG_REACTION:R06305"],"synonyms":[{"name":"geranylgeranyl-diphosphate diphosphate-lyase (cyclizing, taxa-4,11-diene-forming)","type":"related"},{"name":"geranylgeranyl-diphosphate diphosphate-lyase (cyclizing, taxadiene-forming)","type":"related"},{"name":"taxa-4(5),11(12)-diene synthase activity","type":"related"}],"termid":"GO:0050553"}


id: PBO:0042576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKN2B antisense RNA 1","termid":"PBO:0042576"}


id: PBO:0039145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 2 pseudogene 2","termid":"PBO:0039145"}


id: GO:0018826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-methionine = methanethiol + NH3 + 2-oxobutanoate.","definition_xrefs":["RHEA:23800","EC:4.4.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methionine gamma-lyase activity","secondary_identifiers":["MetaCyc:METHIONINE-GAMMA-LYASE-RXN","UM-BBD_reactionID:r0432"],"synonyms":[{"name":"L-methioninase activity","type":"related"},{"name":"L-methionine gamma-lyase activity","type":"related"},{"name":"L-methionine methanethiol-lyase (deaminating)","type":"related"},{"name":"L-methionine methanethiol-lyase (deaminating; 2-oxobutanoate-forming)","type":"related"},{"name":"methioninase activity","type":"related"},{"name":"methionine dethiomethylase activity","type":"related"},{"name":"methionine lyase activity","type":"related"}],"termid":"GO:0018826"}


id: PATO:0000153
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000153 absolute threshold (obsolete PATO:0000153)","termid":"PATO:0000153"}


id: GO:0072374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-carotene + O2 + reduced [NADPH--hemoprotein reductase] = alpha-cryptoxanthin + H(+) + H2O + oxidized [NADPH--hemoprotein reductase]. Zeinoxanthin may also be used as the substrate, in which case lutein is produced.","definition_xrefs":["EC:1.14.14.158","PMID:8837513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"carotene epsilon hydroxylase activity","termid":"GO:0072374"}


id: PBO:0050435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein L","termid":"PBO:0050435"}


id: GO:0060304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reaction involving the removal of one or more phosphate groups from a phosphatidylinositol.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dephosphorylation","termid":"GO:0035303"},{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"is_a","term_name":"regulation of phospholipid metabolic process","termid":"GO:1903725"},{"relation_name":"regulates","term_name":"phosphatidylinositol dephosphorylation","termid":"GO:0046856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of phosphatidylinositol dephosphorylation","synonyms":[{"name":"regulation of phosphoinositide dephosphorylation","type":"exact"}],"termid":"GO:0060304"}


id: MOD:00800
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue, an L-histidine residue, homocitric acid and a one-vanadium seven-iron nine-sulfur cluster to L-cysteinyl-L-histidino-homocitryl vanadium heptairon nonasulfide.","definition_xrefs":["RESID:AA0393","PubMed:2345152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"vanadium containing modified residue","termid":"MOD:00772"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteinyl-L-histidino-homocitryl vanadium heptairon nonasulfide","synonyms":[{"name":"CysHis-[V7Fe9S]","type":"exact"},{"name":"L-cysteinyl-L-histidino-homocitryl vanadium heptairon nonasulfide carbide","type":"exact"},{"name":"nitrogenase iron-vanadium cofactor","type":"exact"}],"termid":"MOD:00800"}


id: GO:1900437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to chemical stimulus.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900428"},{"relation_name":"regulates","term_name":"filamentous growth of a population of unicellular organisms in response to chemical stimulus","termid":"GO:0036171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus","termid":"GO:1900437"}


id: PBO:0088756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrillarin, rRNA and histone methyltransferase","termid":"PBO:0088756"}


id: PBO:0028205
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA_synthesis","termid":"PBO:0028205"}


id: PBO:0067301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 386, pseudogene","termid":"PBO:0067301"}


id: PBO:0080714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat containing, antisense to TP73","termid":"PBO:0080714"}


id: PBO:0047221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 226 member A","termid":"PBO:0047221"}


id: PBO:0052623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 2","termid":"PBO:0052623"}


id: PBO:0068026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 331","termid":"PBO:0068026"}


id: FYPO:0005532
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 16 of histone H4 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H4 acetylation during vegetative growth","termid":"FYPO:0002364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0001320"],"is_obsolete":false,"name":"abnormal histone H4-K16 acetylation during vegetative growth","synonyms":[{"name":"abnormal histone H4-K16 acetylation during mitotic cell cycle","type":"related"},{"name":"abnormal histone H4K16 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005532"}


id: GO:0031375
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A fatty acid synthase complex in which each polypeptide chain catalyzes a single activity.","definition_xrefs":["ISBN:0716720094","PMID:12957385","ISBN:0471331309","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete type II fatty acid synthase complex (obsolete GO:0031375)","synonyms":[{"name":"type II FAS","type":"exact"},{"name":"type II FAS complex","type":"exact"},{"name":"type II fatty acid synthase","type":"exact"},{"name":"type II fatty acid synthase complex","type":"exact"}],"termid":"GO:0031375"}


id: PBO:0052320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1210","termid":"PBO:0052320"}


id: FYPO:0005975
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which lithium ion export from the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal lithium export","synonyms":[{"name":"normal lithium export during mitotic cell cycle","type":"related"},{"name":"normal lithium export during vegetative growth","type":"exact"},{"name":"normal lithium export from cell","type":"exact"},{"name":"normal lithium ion export from cell","type":"exact"}],"termid":"FYPO:0005975"}


id: GO:0019157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (S)-malate + O2 = H2O2 + oxaloacetate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete malate oxidase activity (obsolete GO:0019157)","synonyms":[{"name":"(S)-malate:oxygen oxidoreductase activity","type":"exact"},{"name":"FAD-dependent malate oxidase activity","type":"exact"},{"name":"malic dehydrogenase II","type":"related"},{"name":"malic oxidase activity","type":"exact"}],"termid":"GO:0019157"}


id: GO:0070386
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A procollagen-proline 4-dioxygenase complex that contains alpha subunits of the type I isoform; its activity is readily inhibited by poly(L-proline).","definition_xrefs":["PMID:14500733","PMID:7753822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"procollagen-proline 4-dioxygenase complex","termid":"GO:0016222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575","GO:0005783"],"is_obsolete":false,"name":"procollagen-proline 4-dioxygenase complex, alpha(I) type","synonyms":[{"name":"procollagen-proline, 2-oxoglutarate-4-dioxygenase complex, alpha(I) type","type":"exact"},{"name":"prolyl 4-hydroxylase complex (alpha(I)-type)","type":"broad"}],"termid":"GO:0070386"}


id: GO:0018461
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fluoren-9-ol + 2 NADP+ = fluoren-9-one + 2 NADPH + 2 H+.","definition_xrefs":["EC:1.1.1.256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"fluoren-9-ol dehydrogenase activity","secondary_identifiers":["MetaCyc:9-FLUORENOL-DEHYDROGENASE-RXN","UM-BBD_reactionID:r0408"],"synonyms":[{"name":"9-fluorenol dehydrogenase activity","type":"exact"},{"name":"fluoren-9-ol:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0018461"}


id: GO:0044520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of the activity of a vasoactive intestinal polypeptide receptor in the bitten organism.","definition_xrefs":["GOC:jl","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of vasoactive intestinal polypeptide receptor activity in another organism","termid":"GO:0044519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in positive regulation of vasoactive intestinal polypeptide receptor activity in another organism","synonyms":[{"name":"envenomation resulting in positive regulation of VIP receptor activity in other organism","type":"exact"},{"name":"envenomation resulting in positive regulation of vasoactive intestinal polypeptide receptor activity in other organism","type":"exact"}],"termid":"GO:0044520"}


id: GO:0048222
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular matrix part that consists of cross-linked glycoproteins.","definition_xrefs":["PMID:7048321","GOC:mah","PMID:18508691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"primary cell wall","termid":"GO:0009530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"glycoprotein network","secondary_identifiers":["Wikipedia:Extensin"],"synonyms":[{"name":"extensin","type":"exact"}],"termid":"GO:0048222"}


id: PBO:0074930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 97","termid":"PBO:0074930"}


id: GO:0032957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving myo-inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with three phosphate groups attached.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate metabolic process","termid":"GO:0043647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"inositol trisphosphate metabolic process","synonyms":[{"name":"IP3 metabolic process","type":"exact"},{"name":"IP3 metabolism","type":"exact"},{"name":"inositol trisphosphate metabolism","type":"exact"},{"name":"myo-inositol trisphosphate metabolic process","type":"narrow"}],"termid":"GO:0032957"}


id: GO:0071801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of podosome assembly.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"podosome assembly","termid":"GO:0071800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"regulation of podosome assembly","termid":"GO:0071801"}


id: PBO:0075924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 16","termid":"PBO:0075924"}


id: GO:0080018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an anthocyanin + UDP-D-glucose = an anthocyanin-5-O-glucoside + UDP.","definition_xrefs":["PMID:15807784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"anthocyanin 5-O-glucosyltransferase activity","termid":"GO:0080018"}


id: PBO:0090386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA (cytosine-5-)-methyltransferase Rcm1","termid":"PBO:0090386"}


id: PBO:0077435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 169","termid":"PBO:0077435"}


id: PBO:0031758
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_centromere","termid":"PBO:0031758"}


id: PBO:0054284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1675","termid":"PBO:0054284"}


id: GO:1901718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of dipeptide transmembrane transport.","definition_xrefs":["GOC:vw","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of dipeptide transmembrane transport by regulation of transcription from RNA polymerase II promoter (obsolete GO:1901718)","termid":"GO:1901718"}


id: PBO:0049760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"host cell factor C2","termid":"PBO:0049760"}


id: PR:O43066
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk30 gene.","definition_xrefs":["UniProtKB:O43066","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk30 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC6B1.02","synonyms":[{"name":"Spom972h-ppk30","type":"exact"}],"termid":"PR:O43066"}


id: PBO:0003916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein P2B subunit","termid":"PBO:0003916"}


id: PBO:0090107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GDP dissociation inhibitor Rdi1","termid":"PBO:0090107"}


id: PATO:0000561
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000561 length value (obsolete PATO:0000561)","termid":"PATO:0000561"}


id: PBO:0052509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 23","termid":"PBO:0052509"}


id: GO:0080036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytokinin signaling.","definition_xrefs":["GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"cytokinin-activated signaling pathway","termid":"GO:0009736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of cytokinin-activated signaling pathway","synonyms":[{"name":"regulation of cytokinin mediated signaling pathway","type":"related"},{"name":"regulation of cytokinin mediated signalling","type":"exact"}],"termid":"GO:0080036"}


id: PBO:0041822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnosine synthase 1","termid":"PBO:0041822"}


id: GO:0033892
data:
  {"annotated_genes":["SJAG_01262"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990043"}]},"cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage near pyrimidine dimers to products with 5'-phosphate.","definition_xrefs":["EC:3.1.25.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site-specific endodeoxyribonuclease activity, specific for altered base","termid":"GO:0016890"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01262":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"deoxyribonuclease (pyrimidine dimer) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.1.25.1-RXN"],"synonyms":[{"name":"T4 endonuclease V activity","type":"related"},{"name":"bacteriophage T4 endodeoxyribonuclease V activity","type":"related"},{"name":"endodeoxyribonuclease (pyrimidine dimer) activity","type":"related"}],"termid":"GO:0033892","terms_by_termid":{"GO:1990043":null}}


id: PR:000085730
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe) that has been methylated on Lys-9 but not phosphorylated on Ser-10. Example: UniProtKB:P09988, 2-136, Lys-10, MOD:00663|Ser-11, PR:000026291.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:19362535"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht2/Me:(K9),UnPhos(S10)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"PRO_0000221366, Lys-10, MOD:00663|Ser-11, PR:000026291","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.2, initiator methionine removed K9-methylated and unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht2/InitMet-/K9MeUnPhos:1","type":"exact"},{"name":"UniProtKB:P09988, 2-136, Lys-10, MOD:00663|Ser-11, PR:000026291","type":"related"},{"name":"hht2/Me:(K9),UnPhos(S10)","type":"exact"}],"termid":"PR:000085730"}


id: GO:0071499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a laminar fluid shear stress stimulus. Laminar fluid flow is the force acting on an object in a system where the fluid is moving across a solid surface in parallel layers.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to laminar fluid shear stress","termid":"GO:0034616"},{"relation_name":"is_a","term_name":"cellular response to fluid shear stress","termid":"GO:0071498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to laminar fluid shear stress","termid":"GO:0071499"}


id: PATO:0001624
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A functionality quality held by the bearer when the latter exhibits decreased ability to perform a regular function(s).","definition_xrefs":["PATO:MAH"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"functional","termid":"PATO:0001510"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased functionality","secondary_identifiers":["PATO:0001568","PATO:0001556","PATO:0001641","PATO:0001642"],"synonyms":[{"name":"dysfunction","type":"broad"},{"name":"dysfunctional","type":"broad"},{"name":"having decreased function","type":"exact"},{"name":"impaired","type":"related"},{"name":"lacks function of type","type":"exact"},{"name":"low functionality","type":"exact"},{"name":"partial functionality","type":"exact"}],"termid":"PATO:0001624"}


id: GO:0007036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of calcium ions in the vacuole or between a vacuole and its surroundings.","definition_xrefs":["GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular calcium ion homeostasis","termid":"GO:0006874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"vacuolar calcium ion homeostasis","termid":"GO:0007036"}


id: PBO:0087349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spindle pole body-related intermediate filament protein; forms cell cycle-specific filaments between spindle pole bodies in dividing cells; localizes to poles and microtubules of spindle during anaphase and contributes to spindle stability; involved in Glc7p localization and regulation; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087349"}


id: PBO:0070144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 58 pseudogene","termid":"PBO:0070144"}


id: PBO:0000265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional corepressor Tup11","termid":"PBO:0000265"}


id: GO:0050673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population. Epithelial cells make up the epithelium, the covering of internal and external surfaces of the body, including the lining of vessels and other small cavities. It consists of cells joined by small amounts of cementing substances.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell proliferation","termid":"GO:0050673"}


id: PBO:0070849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene","termid":"PBO:0070849"}


id: GO:0099130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an estrogen.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"estrogen binding","termid":"GO:0099130"}


id: SO:0000667
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of one or more nucleotides added between two adjacent nucleotides in the sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration","termid":"SO:0001059"},{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertion","secondary_identifiers":["loinc:LA6687-3","SO:1000034"],"synonyms":[{"name":"insertion","type":"exact"},{"name":"nucleotide insertion","type":"exact"},{"name":"nucleotide_insertion","type":"exact"}],"termid":"SO:0000667"}


id: PBO:0068668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 49, pseudogene","termid":"PBO:0068668"}


id: FYPO:0001642
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-phenylalanine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular phenylalanine level","synonyms":[{"name":"normal cellular L-phenylalanine level","type":"exact"},{"name":"normal cellular phenylalanine level during mitotic cell cycle","type":"related"},{"name":"normal cellular phenylalanine level during vegetative growth","type":"exact"},{"name":"normal level of phenylalanine in cell","type":"exact"}],"termid":"FYPO:0001642"}


id: GO:0070976
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Toll-Interleukin receptor (TIR) domain of a protein. The TIR domain is an intracellular 200 residue domain that is found in the Toll protein, the interleukin-1 receptor (IL-1R), and MyD88; it contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components.","definition_xrefs":["GOC:mah","InterPro:IPR000157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"TIR domain binding","synonyms":[{"name":"Toll-Interleukin receptor domain binding","type":"exact"}],"termid":"GO:0070976"}


id: GO:0103050
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: isobutanol + NADP = isobutyraldehyde + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete isobutyraldehyde reductase activity (obsolete GO:0103050)","termid":"GO:0103050"}


id: PBO:0001286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial coenzyme A transporter (predicted)","termid":"PBO:0001286"}


id: PBO:0065906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rabaptin, RAB GTPase binding effector protein 2","termid":"PBO:0065906"}


id: PBO:0025543
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate dehydrogenase deficiency","termid":"PBO:0025543"}


id: GO:0051095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of helicase activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ATP-dependent activity","termid":"GO:0043462"},{"relation_name":"is_a","term_name":"regulation of catalytic activity","termid":"GO:0050790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of helicase activity","termid":"GO:0051095"}


id: PBO:0077805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOX high mobility group box family member 3","termid":"PBO:0077805"}


id: PBO:0088053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-like protein modifier; promotes alternative splicing of SRC1 pre-mRNA; binds non-covalently to the HIND domain of Snu66, may function in modification of Sph1p and Hbt1p, functionally complemented by the human or S. pombe ortholog; mechanism of Hub1p adduct formation not yet clear","termid":"PBO:0088053"}


id: PBO:0041211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper and W2 domains 2","termid":"PBO:0041211"}


id: GO:1903318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein maturation.","definition_xrefs":["GOC:vw","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"is_a","term_name":"regulation of protein maturation","termid":"GO:1903317"},{"relation_name":"negatively_regulates","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein maturation","synonyms":[{"name":"down regulation of protein maturation","type":"exact"},{"name":"down-regulation of protein maturation","type":"exact"},{"name":"downregulation of protein maturation","type":"exact"},{"name":"inhibition of protein maturation","type":"narrow"}],"termid":"GO:1903318"}


id: PBO:0030673
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_nucleus_during_vegetative_growth","termid":"PBO:0030673"}


id: MOD:00034
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-cysteine residues to form L-cystine.","definition_xrefs":["RESID:AA0025#CYS2","PubMed:2001356","PubMed:2076469","PubMed:3083866","PubMed:8344916","ChEBI:16283","DeltaMass:0","PubMed:7918467","PubMed:366603","PubMed:1988019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disulfide crosslinked residues","termid":"MOD:00689"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cystine (cross-link)","synonyms":[{"name":"(2R,2'R)-3,3'-disulfane-1,2-diylbis(2-aminopropanoic acid)","type":"exact"},{"name":"2-amino-3-(2-amino-2-carboxy-ethyl)disulfanyl-propanoic acid","type":"related"},{"name":"3,3'-disulfane-1,2-diylbis(2-azanylpropanoic acid)","type":"exact"},{"name":"3,3'-dithiobis(2-aminopropanoic acid)","type":"exact"},{"name":"3,3'-dithiobisalanine","type":"exact"},{"name":"3,3'-dithiodialanine","type":"exact"},{"name":"Cys2","type":"exact"},{"name":"Cystine ((Cys)2)","type":"exact"},{"name":"DISULFID","type":"exact"},{"name":"DISULFID Interchain","type":"exact"},{"name":"L-cystine","type":"exact"},{"name":"XLNK-SCys-SCys","type":"exact"},{"name":"beta,beta'-diamino-beta,beta'-dicarboxydiethyldisulfide","type":"exact"},{"name":"beta,beta'-dithiodialanine","type":"exact"},{"name":"bis(alpha-aminopropionic acid)-beta-disulfide","type":"exact"},{"name":"bis(beta-amino-beta-carboxyethyl)disulfide","type":"exact"},{"name":"dicysteine","type":"exact"}],"termid":"MOD:00034"}


id: PBO:0047236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 230 member H","termid":"PBO:0047236"}


id: PBO:0028063
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transposon_gene_mRNA_level","termid":"PBO:0028063"}


id: PBO:0004283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear export factor (predicted)","termid":"PBO:0004283"}


id: MOD:00817
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to 3'-geranyl-2',3'-dihydro-2',N2-cyclo-L-tryptophan.","definition_xrefs":["PubMed:8168130","RESID:AA0408","PubMed:16407988","ChEBI:35304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclized residue","termid":"MOD:00601"},{"relation_name":"is_a","term_name":"isoprenylated tryptophan","termid":"MOD:01115"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-geranyl-2',3'-dihydro-2',N2-cyclo-L-tryptophan","synonyms":[{"name":"(2S,3R)-3-geranyl-2,3-dihydro-2,N(alpha)-cyclo-L-tryptophan","type":"exact"},{"name":"(2S,3aR,8aS)-3a-[(2E)-3,7-dimethylocta-2,6-dien-1-yl]-1,2,3,3a,8,8a-hexahydropyrrolo[2,3-b]indole-2-carboxylic acid","type":"exact"},{"name":"3'-geranyl-2',3'-dihydro-2',N2-cyclo-L-tryptophan","type":"exact"},{"name":"3'Ger2'N2cycTrp","type":"exact"},{"name":"LIPID 3'-geranyl-2',N2-cyclotryptophan","type":"exact"}],"termid":"MOD:00817"}


id: PBO:0024858
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM4/6/7 helicase complex translocates along double-stranded DNA","termid":"PBO:0024858"}


id: GO:1905040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an otic placode over time, from its formation to the mature structure.","definition_xrefs":["GO_REF:0000094","GOC:bf","GOC:TermGenie","PMID:18356247","GOC:mat","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal placode development","termid":"GO:0071696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"otic placode development","synonyms":[{"name":"auditory placode development","type":"related"},{"name":"ear placode development","type":"related"},{"name":"ear/otic placode development","type":"related"},{"name":"octaval VIII placode development","type":"related"},{"name":"octaval placode development","type":"related"},{"name":"placoda otica development","type":"exact"}],"termid":"GO:1905040"}


id: PATO:0001676
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An efficiency which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"efficient","termid":"PATO:0001678"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased efficiency","synonyms":[{"name":"high efficiency","type":"exact"}],"termid":"PATO:0001676"}


id: PBO:0040470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATR serine/threonine kinase","termid":"PBO:0040470"}


id: PR:Q10273
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC13G7.09c gene.","definition_xrefs":["UniProtKB:Q10273","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G7.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.09c","synonyms":[{"name":"Spom972h-SPAC13G7.09c","type":"exact"}],"termid":"PR:Q10273"}


id: PBO:0079043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 1-5","termid":"PBO:0079043"}


id: GO:0016859
data:
  {"annotated_genes":["SJAG_00470","SJAG_03905","SJAG_01714","SJAG_01246","SJAG_00078","SJAG_02620","SJAG_03601","SJAG_04352","SJAG_00602","SJAG_02308","SJAG_02551","SJAG_02413","SJAG_04155","SJAG_00950","SJAG_01270","SJAG_03238","SJAG_01005"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111382,94517,93930,57747,88826,109740,76757,100558,113402,108503,98990,103711,101454,86040,91391,88039,100744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003755"}]},"cv_name":"molecular_function","definition":"Catalysis of a reaction that interconverts cis and trans isomers. Atoms or groups are termed cis or trans to one another when they lie respectively on the same or on opposite sides of a reference plane identifiable as common among stereoisomers.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isomerase activity","termid":"GO:0016853"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00470":null,"SJAG_00602":null,"SJAG_00950":null,"SJAG_01005":null,"SJAG_01246":null,"SJAG_01270":null,"SJAG_01714":null,"SJAG_02308":null,"SJAG_02413":null,"SJAG_02551":null,"SJAG_02620":null,"SJAG_03238":null,"SJAG_03601":null,"SJAG_03905":null,"SJAG_04155":null,"SJAG_04352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"cis-trans isomerase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:5.2.-.-"],"termid":"GO:0016859","terms_by_termid":{"GO:0003755":null}}


id: GO:0075505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Viral penetration into the host nucleus where a viral capsid passes intact through the host nuclear pore complex (NPC).","definition_xrefs":["PMID:22929056","VZ:989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral penetration into host nucleus","termid":"GO:0075732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry of intact viral capsid into host nucleus through nuclear pore complex","termid":"GO:0075505"}


id: PR:Q10408
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sro7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F3.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.03","synonyms":[{"name":"Spom972h-sro7","type":"exact"}],"termid":"PR:Q10408"}


id: GO:0032246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a pyrimidine nucleoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleoside transport","termid":"GO:0032242"},{"relation_name":"regulates","term_name":"pyrimidine nucleoside transport","termid":"GO:0015864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of pyrimidine nucleoside transport","termid":"GO:0032246"}


id: PBO:0017628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial coenzyme A transmembrane transporter (predicted)","termid":"PBO:0017628"}


id: PR:Q9URY5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A flavohemoprotein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavohemoprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.02c","secondary_identifiers":["UniProtKB:Q9URY5"],"synonyms":[{"name":"Flavohemoglobin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NO oxygenase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NOD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-hmp","type":"exact"},{"name":"hemoglobin-like protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nitric oxide dioxygenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9URY5"}


id: PBO:0003191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine-repressible acid phosphatase Pho4","termid":"PBO:0003191"}


id: GO:0009963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of flavonoids.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of flavonoid biosynthetic process","termid":"GO:0009962"},{"relation_name":"positively_regulates","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of flavonoid biosynthetic process","synonyms":[{"name":"activation of flavonoid biosynthetic process","type":"narrow"},{"name":"positive regulation of flavonoid anabolism","type":"exact"},{"name":"positive regulation of flavonoid biosynthesis","type":"exact"},{"name":"positive regulation of flavonoid formation","type":"exact"},{"name":"positive regulation of flavonoid synthesis","type":"exact"},{"name":"stimulation of flavonoid biosynthetic process","type":"narrow"},{"name":"up regulation of flavonoid biosynthetic process","type":"exact"},{"name":"up-regulation of flavonoid biosynthetic process","type":"exact"},{"name":"upregulation of flavonoid biosynthetic process","type":"exact"}],"termid":"GO:0009963"}


id: PBO:0086290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in DNA repair; mutants show reduced efficiency of non-homologous end-joining repair","termid":"PBO:0086290"}


id: GO:0050449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-geranylgeranyl diphosphate = casbene + diphosphate.","definition_xrefs":["EC:4.2.3.8","RHEA:14901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"casbene synthase activity","secondary_identifiers":["KEGG_REACTION:R02064","MetaCyc:CASBENE-SYNTHASE-RXN"],"synonyms":[{"name":"casbene synthetase activity","type":"related"},{"name":"geranylgeranyl-diphosphate diphosphate-lyase (cyclizing)","type":"related"},{"name":"geranylgeranyl-diphosphate diphosphate-lyase (cyclizing, casbene-forming)","type":"related"}],"termid":"GO:0050449"}


id: GO:0033721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aldehyde + NADP+ + H2O = an acid + NADPH + H+.","definition_xrefs":["RHEA:11888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase [NAD(P)+] activity","termid":"GO:0004030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aldehyde dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:ALDEHYDE-DEHYDROGENASE-NADP+-RXN","EC:1.2.1.4"],"synonyms":[{"name":"NADP-acetaldehyde dehydrogenase activity","type":"related"},{"name":"NADP-dependent aldehyde dehydrogenase activity","type":"related"},{"name":"aldehyde:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0033721"}


id: GO:1905165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lysosomal protein catabolic process.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:TermGenie","PMID:23499937","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein catabolic process in the vacuole","termid":"GO:1904350"},{"relation_name":"regulates","term_name":"lysosomal protein catabolic process","termid":"GO:1905146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"regulation of lysosomal protein catabolic process","synonyms":[{"name":"regulation of cellular protein breakdown in lysosome","type":"exact"},{"name":"regulation of cellular protein catabolic process in lysosome","type":"exact"},{"name":"regulation of cellular protein catabolism in lysosome","type":"exact"},{"name":"regulation of cellular protein degradation in lysosome","type":"exact"},{"name":"regulation of lysosomal protein catabolism","type":"exact"},{"name":"regulation of lysosomal protein degradation","type":"exact"},{"name":"regulation of lysosomal proteolysis","type":"related"},{"name":"regulation of proteolysis within lysosome","type":"related"}],"termid":"GO:1905165"}


id: PBO:0083071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydroxyacetone kinase; required for detoxification of dihydroxyacetone (DHA); involved in stress adaptation","termid":"PBO:0083071"}


id: PBO:0064644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPDPF pseudogene 1","termid":"PBO:0064644"}


id: PBO:0038486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABCB10 pseudogene 1","termid":"PBO:0038486"}


id: PBO:0040649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAZ2B antisense RNA 1","termid":"PBO:0040649"}


id: PBO:0045761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethylmalonyl-CoA decarboxylase 1","termid":"PBO:0045761"}


id: GO:0072079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a nephron tubule from unspecified parts. A nephron tubule is an epithelial tube that is part of the nephron, the functional part of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic epithelial tube formation","termid":"GO:0001838"},{"relation_name":"part_of","term_name":"nephron tubule morphogenesis","termid":"GO:0072078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephron tubule formation","termid":"GO:0072079"}


id: PR:Q10065
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trk2 gene.","definition_xrefs":["UniProtKB:Q10065","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium transport protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1639.02c","synonyms":[{"name":"Spom972h-trk2","type":"exact"}],"termid":"PR:Q10065"}


id: PR:Q9UTS5-2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A zinc finger protein zas1 (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9UTS5-2.","definition_xrefs":["UniProtKB:Q9UTS5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc finger protein zas1 (Schizosaccharomyces pombe 972h-)","termid":"PR:Q9UTS5"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein zas1 isoform 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:Q9UTS5-2"],"synonyms":[{"name":"Spom972h-zas1/iso:2","type":"exact"},{"name":"zinc finger protein zas1 isoform zas1A (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTS5-2"}


id: PBO:0050787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 3A","termid":"PBO:0050787"}


id: GO:0071670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a smooth muscle cell in response to an external stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell migration","termid":"GO:0014909"},{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle cell chemotaxis","termid":"GO:0071670"}


id: GO:0071286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a magnesium ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to magnesium ion","termid":"GO:0032026"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to magnesium ion","termid":"GO:0071286"}


id: PBO:0027055
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-curved_microtubules","termid":"PBO:0027055"}


id: GO:0005802
data:
  {"annotated_genes":["SJAG_04338","SJAG_01488","SJAG_03670","SJAG_02177","SJAG_04398","SJAG_00296","SJAG_01571","SJAG_01945","SJAG_01516","SJAG_01448","SJAG_02912","SJAG_03663","SJAG_04819","SJAG_01001","SJAG_05330","SJAG_04358","SJAG_03953","SJAG_02240","SJAG_02525","SJAG_01409","SJAG_05209","SJAG_00669","SJAG_03756","SJAG_02168","SJAG_04340","SJAG_03347"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84737,86803,88188,88340,88957,89239,91804,92769,94779,95114,95537,95576,95829,95976,96257,97634,98737,99450,100143,100465,108569,113707,114587],"is_not":false,"summary":null,"term":"GO:0005802"},{"annotations":[103437,87277,91805,89280,86804],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032588"}]},"cv_name":"cellular_component","definition":"The network of interconnected tubular and cisternal structures located within the Golgi apparatus on the side distal to the endoplasmic reticulum, from which secretory vesicles emerge. The trans-Golgi network is important in the later stages of protein secretion where it is thought to play a key role in the sorting and targeting of secreted proteins to the correct destination.","definition_xrefs":["GOC:vw","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi apparatus subcompartment","termid":"GO:0098791"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_00669":null,"SJAG_01001":null,"SJAG_01409":null,"SJAG_01448":null,"SJAG_01488":null,"SJAG_01516":null,"SJAG_01571":null,"SJAG_01945":null,"SJAG_02168":null,"SJAG_02177":null,"SJAG_02240":null,"SJAG_02525":null,"SJAG_02912":null,"SJAG_03347":null,"SJAG_03663":null,"SJAG_03670":null,"SJAG_03756":null,"SJAG_03953":null,"SJAG_04338":null,"SJAG_04340":null,"SJAG_04358":null,"SJAG_04398":null,"SJAG_04819":null,"SJAG_05209":null,"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005794","GO:0005737"],"is_obsolete":false,"name":"trans-Golgi network","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao9456487"],"synonyms":[{"name":"Golgi trans face","type":"related"},{"name":"Golgi trans-face","type":"related"},{"name":"TGN","type":"exact"},{"name":"late Golgi","type":"related"},{"name":"maturing face","type":"related"},{"name":"trans Golgi network","type":"exact"},{"name":"trans face","type":"broad"}],"termid":"GO:0005802","terms_by_termid":{"GO:0005802":null,"GO:0032588":null}}


id: GO:0050464
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nitrite + NADP+ + H2O = nitrate + NADPH + H+.","definition_xrefs":["RHEA:19061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate reductase [NAD(P)H] activity","termid":"GO:0050463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"nitrate reductase (NADPH) activity","secondary_identifiers":["EC:1.7.1.3","MetaCyc:NITRATE-REDUCTASE-NADPH-RXN"],"synonyms":[{"name":"NADPH-nitrate reductase activity","type":"related"},{"name":"NADPH:nitrate oxidoreductase activity","type":"related"},{"name":"NADPH:nitrate reductase activity","type":"related"},{"name":"assimilatory NADPH-nitrate reductase activity","type":"related"},{"name":"assimilatory nitrate reductase activity","type":"broad"},{"name":"assimilatory reduced nicotinamide adenine dinucleotide phosphate-nitrate reductase activity","type":"related"},{"name":"nitrate reductase (NADPH(2)) activity","type":"related"},{"name":"nitrate reductase (NADPH2)","type":"related"},{"name":"nitrite:NADP+ oxidoreductase activity","type":"related"},{"name":"triphosphopyridine nucleotide-nitrate reductase activity","type":"related"}],"termid":"GO:0050464"}


id: GO:0016979
data:
  {"annotated_genes":["SJAG_01164"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101298],"is_not":false,"summary":null,"term":"GO:0016979"}]},"cv_name":"molecular_function","definition":"Catalysis of the lipoylation of a protein in two steps: ATP + (R)-lipoate + a [lipoyl-carrier protein]-L-lysine = a [lipoyl-carrier protein]-N6-(lipoyl)lysine + AMP + diphosphate (overall reaction): (1) ATP + (R)-lipoate = lipoyl-AMP + diphosphate; (2) lipoyl-AMP + a [lipoyl-carrier protein]-L-lysine = a [lipoyl-carrier protein]-N6-(lipoyl)lysine + AMP.","definition_xrefs":["PMID:16141198","PMID:17570395","RHEA:49288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"},{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01164":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874","GO:0140096","GO:0016740","GO:0016779"],"is_obsolete":false,"name":"lipoate-protein ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0008916","GO:0102315","MetaCyc:RXN-8654","MetaCyc:RXN-8655","EC:6.3.1.20","MetaCyc:RXN0-1141","GO:0016978","MetaCyc:RXN-13039"],"synonyms":[{"name":"lipoate-protein ligase A activity","type":"narrow"},{"name":"lipoate-protein ligase B activity","type":"narrow"},{"name":"lipoate-protein ligase activity (lipoylation of glycine cleavage complex)","type":"narrow"}],"termid":"GO:0016979","terms_by_termid":{"GO:0016979":null}}


id: PBO:0052837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 2-2","termid":"PBO:0052837"}


id: GO:0072293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the tubules arranged along the proximal/distal axis of the metanephric nephron acquire their identity.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of nephron tubule identity","termid":"GO:0072081"},{"relation_name":"is_a","term_name":"pattern specification involved in metanephros development","termid":"GO:0072268"},{"relation_name":"part_of","term_name":"proximal/distal pattern formation involved in metanephric nephron development","termid":"GO:0072272"},{"relation_name":"part_of","term_name":"metanephric nephron tubule formation","termid":"GO:0072289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of metanephric nephron tubule identity","termid":"GO:0072293"}


id: GO:0031128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process involving two tissues in which one tissue (the inducer) produces a signal that directs cell fate commitment of cells in the second tissue (the responder).","definition_xrefs":["GOC:dph","GOC:mah","PMID:24503535","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"developmental induction","termid":"GO:0031128"}


id: GO:0030717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chromosome organization process in which meiotic chromosomes in the oocyte nucleus cluster together to form a compact spherical structure called the karyosome.","definition_xrefs":["PMID:18039935","PMID:11700288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"karyosome formation","termid":"GO:0061988"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"oocyte karyosome formation","termid":"GO:0030717"}


id: PBO:0086766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; similar to DTDP-glucose 4,6-dehydratases; GFP-fusion protein localizes to the cytoplasm; up-regulated in response to the fungicide mancozeb; not essential for viability","termid":"PBO:0086766"}


id: PR:O94740
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An hsp90 co-chaperone Cdc37 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12800:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hsp90 co-chaperone Cdc37 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC9B6.10","secondary_identifiers":["UniProtKB:O94740"],"synonyms":[{"name":"SPBC9B6.10","type":"related"},{"name":"Spom972h-CDC37","type":"exact"},{"name":"cell division control protein 37 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"hsp90 chaperone protein kinase-targeting subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94740"}


id: PATO:0000517
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000517 abiotic stress sensitivity value (obsolete PATO:0000517)","termid":"PATO:0000517"}


id: PBO:0032700
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_nucleus_during_cellular_response_to_hydroxyurea","termid":"PBO:0032700"}


id: PBO:0065188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PROX1 antisense RNA 1","termid":"PBO:0065188"}


id: PBO:0001309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF726 family protein","termid":"PBO:0001309"}


id: PBO:0057670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1261","termid":"PBO:0057670"}


id: PBO:0089897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Ras-interacting protein with DIL domain, human RADIL and RASIP1 ortholog (predicted), implicated in vesicle-mediated transport","termid":"PBO:0089897"}


id: PBO:0111896
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin bimC subfamily","termid":"PBO:0111896"}


id: PBO:0005567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8-conjugating enzyme Ubc12","termid":"PBO:0005567"}


id: PBO:0002203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatA N-acetyltransferase complex catalytic subunit Naa10 (predicted)","termid":"PBO:0002203"}


id: GO:1901362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of organic cyclic compound.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete organic cyclic compound biosynthetic process (obsolete GO:1901362)","synonyms":[{"name":"organic cyclic compound anabolism","type":"exact"},{"name":"organic cyclic compound biosynthesis","type":"exact"},{"name":"organic cyclic compound formation","type":"exact"},{"name":"organic cyclic compound synthesis","type":"exact"}],"termid":"GO:1901362"}


id: PBO:0075349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sclerostin domain containing 1","termid":"PBO:0075349"}


id: GO:0010075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the size and shape of a meristem.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"part_of","term_name":"meristem maintenance","termid":"GO:0010073"},{"relation_name":"regulates","term_name":"meristem growth","termid":"GO:0035266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of meristem growth","synonyms":[{"name":"regulation of meristem size","type":"exact"}],"termid":"GO:0010075"}


id: PBO:0054614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2019","termid":"PBO:0054614"}


id: PBO:0004639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase Swf1 (predicted)","termid":"PBO:0004639"}


id: GO:0089702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: di-trans,octa-cis-undecaprenyl phosphate + UDP-alpha-D-glucose = alpha-D-glucosyl di-trans,octa-cis-undecaprenyl diphosphate + UMP.","definition_xrefs":["RHEA:28126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016780","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"undecaprenyl-phosphate glucose phosphotransferase activity","secondary_identifiers":["EC:2.7.8.31"],"termid":"GO:0089702"}


id: GO:0019541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving propionate, the anion derived from propionic (propanoic) acid, a carboxylic acid important in the energy metabolism of ruminants.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid metabolic process","termid":"GO:0046459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"propionate metabolic process","synonyms":[{"name":"propanoate metabolic process","type":"exact"},{"name":"propanoate metabolism","type":"exact"},{"name":"propionate metabolism","type":"exact"}],"termid":"GO:0019541"}


id: PR:O13825
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An immediate early response 3-interacting protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR15858:SF0","PRO:DNx","OMA:SCHPO01030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein yos1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.09","secondary_identifiers":["UniProtKB:O13825"],"synonyms":[{"name":"Spom972h-IER3IP1","type":"exact"}],"termid":"PR:O13825"}


id: null:chado_properties:version
data:
  {"annotation_feature_type":"gene","cv_name":"chado_properties","definition":"Chado schema version","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"version","termid":"null:chado_properties:version"}


id: PBO:0090496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA pseudouridine synthase Pus4","termid":"PBO:0090496"}


id: GO:0047910
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactose + NADP+ = D-galactonolactone + NADPH.","definition_xrefs":["EC:1.1.1.120","MetaCyc:GALACTOSE-1-DEHYDROGENASE-NADP+-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"galactose 1-dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:18625"],"synonyms":[{"name":"D-galactose dehydrogenase (NADP+)","type":"related"},{"name":"D-galactose:NADP+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047910"}


id: PBO:0066282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member F, pseudogene","termid":"PBO:0066282"}


id: PBO:0065556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E synthase 2","termid":"PBO:0065556"}


id: PBO:0005190
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"longest ORF with methionine is 66 amino acids","termid":"PBO:0005190"}


id: PBO:0031346
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_6-azauracil","termid":"PBO:0031346"}


id: PBO:0046173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELK1 pseudogene 1","termid":"PBO:0046173"}


id: PATO:0001468
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the back or upper surface of an organism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curved dorsal","synonyms":[{"name":"curved posterior (human torso)","type":"exact"},{"name":"curved superior (human head)","type":"exact"}],"termid":"PATO:0001468"}


id: GO:0008452
data:
  {"annotated_genes":["SJAG_00956"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003972"}]},"cv_name":"molecular_function","definition":"Catalysis of the formation of a phosphodiester bond between a hydroxyl group at the end of one RNA chain and the phosphate group at the end of another.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming phosphoric ester bonds","termid":"GO:0016886"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00956":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874","GO:0140098"],"is_obsolete":false,"name":"RNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008452","terms_by_termid":{"GO:0003972":null}}


id: GO:0031626
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to beta-endorphin, a peptide generated by the cleavage of pro-opiomelanocortin.","definition_xrefs":["GOC:nln","PMID:6267560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"beta-endorphin binding","termid":"GO:0031626"}


id: GO:1905679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of adaptive immune effector response.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","ISBN:9781405196833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of adaptive immune response","termid":"GO:0002821"},{"relation_name":"is_a","term_name":"regulation of adaptive immune effector response","termid":"GO:1905677"},{"relation_name":"positively_regulates","term_name":"adaptive immune effector response","termid":"GO:0090718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of adaptive immune effector response","synonyms":[{"name":"activation of adaptive immune effector response","type":"narrow"},{"name":"up regulation of adaptive immune effector response","type":"exact"},{"name":"up-regulation of adaptive immune effector response","type":"exact"},{"name":"upregulation of adaptive immune effector response","type":"exact"}],"termid":"GO:1905679"}


id: GO:0150053
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse of a climbing fiber onto the dendrites of a Purkinje cell in cerebellum. The climbing fiber originates from the inferior olivary nucleus of the medulla oblongata.","definition_xrefs":["PMID:19597563","GOC:aruk","PMID:23811844","PMID:5044254","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric, glutamatergic, excitatory synapse","termid":"GO:0098985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cerebellar climbing fiber to Purkinje cell synapse","synonyms":[{"name":"cerebellar climbing fibre to Purkinje cell synapse","type":"exact"}],"termid":"GO:0150053"}


id: PBO:0109840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_allele_systematic_id","termid":"PBO:0109840"}


id: GO:0005267
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of a potassium ion through a transmembrane aqueous pore or channel.","definition_xrefs":["GOC:mtg_transport","GOC:pr","GOC:BHF","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation channel activity","termid":"GO:0005261"},{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"potassium channel activity","secondary_identifiers":["Reactome:R-HSA-1296035","Reactome:R-HSA-1296024","Reactome:R-HSA-1299318","Reactome:R-HSA-1299338","Reactome:R-HSA-1296037","Reactome:R-HSA-1299359","Reactome:R-HSA-1296039","Reactome:R-HSA-1299304","Reactome:R-HSA-1299297","Reactome:R-HSA-2534365","Reactome:R-HSA-1296348","Reactome:R-HSA-5578910"],"termid":"GO:0005267"}


id: GO:0007108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process involved in starting cell separation.","definition_xrefs":["GOC:dph","GOC:tb","GOC:clt"],"gene_count":0,"genotype_count":0,"name":"obsolete cytokinesis, initiation of separation (obsolete GO:0007108)","synonyms":[{"name":"cytokinesis, initiation of separation","type":"exact"},{"name":"initiation of separation involved in cytokinesis","type":"exact"}],"termid":"GO:0007108"}


id: GO:0045160
data:
  {"annotated_genes":["SJAG_04901","SJAG_04001","SJAG_04781"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91438,92940,99327],"is_not":false,"summary":null,"term":"GO:0045160"}]},"cv_name":"cellular_component","definition":"A myosin complex containing a class I myosin heavy chain and associated light chains; myosin I heavy chains are single-headed, possess tails of various lengths, and do not self-associate into bipolar filaments; myosin I complexes are involved in diverse processes related to membrane traffic and cell movement.","definition_xrefs":["PMID:9438839","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04001":null,"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0015629","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"myosin I complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0045160","terms_by_termid":{"GO:0045160":null}}


id: PBO:0068609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 60, pseudogene","termid":"PBO:0068609"}


id: GO:1900839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fumigaclavine C biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ergot alkaloid biosynthetic process","termid":"GO:1900824"},{"relation_name":"is_a","term_name":"regulation of fumigaclavine C biosynthetic process","termid":"GO:1900837"},{"relation_name":"positively_regulates","term_name":"fumigaclavine C biosynthetic process","termid":"GO:1900809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of fumigaclavine C biosynthetic process","synonyms":[{"name":"up regulation of fumigaclavine C biosynthetic process","type":"exact"},{"name":"up-regulation of fumigaclavine C biosynthetic process","type":"exact"},{"name":"upregulation of fumigaclavine C biosynthetic process","type":"exact"}],"termid":"GO:1900839"}


id: PBO:0071325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 1","termid":"PBO:0071325"}


id: PBO:0012608
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae ADR2","termid":"PBO:0012608"}


id: GO:0019455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown, via the compound cystine, of L-cysteine, catalyzed by the enzyme cystine reductase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine catabolic process via cystine","termid":"GO:0019453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0006520","GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"L-cysteine catabolic process via cystine, using cystine reductase","synonyms":[{"name":"L-cysteine breakdown via cystine, using cystine reductase","type":"exact"},{"name":"L-cysteine degradation via cystine, using cystine reductase","type":"exact"}],"termid":"GO:0019455"}


id: PBO:0049156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 2A","termid":"PBO:0049156"}


id: PBO:0025502
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate carboxylase deficiency","termid":"PBO:0025502"}


id: GO:0050236
data:
  {"annotated_genes":["SJAG_01543"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96945,110473],"is_not":false,"summary":null,"term":"GO:0050236"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + pyridoxine = H+ + NADPH + pyridoxal.","definition_xrefs":["EC:1.1.1.65","RHEA:16129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldo-keto reductase (NADPH) activity","termid":"GO:0004033"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01543":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"pyridoxine:NADP 4-dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PYRIDOXINE-4-DEHYDROGENASE-RXN","KEGG_REACTION:R01708"],"synonyms":[{"name":"PL reductase activity","type":"related"},{"name":"pyridoxal reductase activity","type":"related"},{"name":"pyridoxin dehydrogenase activity","type":"related"},{"name":"pyridoxine dehydrogenase activity","type":"related"},{"name":"pyridoxine:NADP 4-oxidoreductase activity","type":"related"},{"name":"pyridoxol dehydrogenase activity","type":"related"}],"termid":"GO:0050236","terms_by_termid":{"GO:0050236":null}}


id: PBO:0059744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 18","termid":"PBO:0059744"}


id: GO:0009716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of flavonoid phytoalexins, a group of water-soluble phenolic derivatives containing a flavan skeleton, which possess antibiotic activity and are produced by plant tissues in response to infection.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"},{"relation_name":"is_a","term_name":"flavonoid phytoalexin metabolic process","termid":"GO:0046285"},{"relation_name":"is_a","term_name":"phytoalexin biosynthetic process","termid":"GO:0052315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"flavonoid phytoalexin biosynthetic process","synonyms":[{"name":"flavonoid phytoalexin anabolism","type":"exact"},{"name":"flavonoid phytoalexin biosynthesis","type":"exact"},{"name":"flavonoid phytoalexin formation","type":"exact"},{"name":"flavonoid phytoalexin synthesis","type":"exact"}],"termid":"GO:0009716"}


id: PBO:0080777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related 8","termid":"PBO:0080777"}


id: PBO:0000302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rrm RNA recognition motif","termid":"PBO:0000302"}


id: PBO:0086865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative serine/threonine protein kinase; implicated in the regulation of phospholipid asymmetry through the activation of phospholipid translocases (flippases); involved in the phosphorylation of upstream inhibitory kinase Ypk1p along with Fpk1p; has a redundant role in the cellular response to mating pheromone; KIN82 has a paralog, FPK1, that arose from the whole genome duplication","termid":"PBO:0086865"}


id: GO:2000968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell wall polysaccharide catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of cell wall polysaccharide catabolic process","termid":"GO:2000966"},{"relation_name":"positively_regulates","term_name":"cell wall polysaccharide catabolic process","termid":"GO:0044347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell wall polysaccharide catabolic process","synonyms":[{"name":"positive regulation of cell wall polysaccharide breakdown","type":"exact"}],"termid":"GO:2000968"}


id: PBO:0073682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirtuin 4","termid":"PBO:0073682"}


id: GO:0042206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of halogenated hydrocarbons, compounds derived from hydrocarbons by replacing one or more hydrogen atoms with halogen atoms.","definition_xrefs":["GOC:krc","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"halogenated hydrocarbon metabolic process","termid":"GO:0042197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"halogenated hydrocarbon catabolic process","synonyms":[{"name":"halogenated hydrocarbon breakdown","type":"exact"},{"name":"halogenated hydrocarbon catabolism","type":"exact"},{"name":"halogenated hydrocarbon degradation","type":"exact"}],"termid":"GO:0042206"}


id: PBO:0067136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 184, pseudogene","termid":"PBO:0067136"}


id: SOFP:score
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"A GFF3 score","definition_xrefs":["so:sjc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"score","termid":"SOFP:score"}


id: GO:0120325
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a NuRD complex.","definition_xrefs":["PMID:25150861","GOC:lb","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"NuRD complex binding","termid":"GO:0120325"}


id: PBO:0079227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 4 pseudogene 1","termid":"PBO:0079227"}


id: GO:0090515
data:
  {"annotated_genes":["SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99917],"is_not":false,"summary":null,"term":"GO:0090515"}]},"cv_name":"biological_process","definition":"The directed movement of L-glutamate into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamate transmembrane transport","termid":"GO:0015813"},{"relation_name":"is_a","term_name":"glutamate transmembrane import into vacuole","termid":"GO:0090454"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"L-glutamate transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090515","terms_by_termid":{"GO:0090515":null}}


id: CHEBI:17202
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP","termid":"CHEBI:17202"}


id: PR:O74489
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A quinone oxidoreductase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04829","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quinone oxidoreductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.16c","secondary_identifiers":["UniProtKB:O74489"],"synonyms":[{"name":"NADPH:quinone reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-qorA","type":"exact"}],"termid":"PR:O74489"}


id: GO:0046914
data:
  {"annotated_genes":["SJAG_02298","SJAG_04189","SJAG_04048","SJAG_04516","SJAG_05353","SJAG_02048","SJAG_02043","SJAG_03029","SJAG_05343","SJAG_02569","SJAG_00717","SJAG_00642","SJAG_03398","SJAG_00483","SJAG_02956","SJAG_05173","SJAG_03831","SJAG_02908","SJAG_05345","SJAG_04129","SJAG_01992","SJAG_03538","SJAG_MIT20","SJAG_03286","SJAG_02347","SJAG_00865","SJAG_03761","SJAG_00923","SJAG_00926","SJAG_04353","SJAG_02575","SJAG_01088","SJAG_04414","SJAG_00406","SJAG_00742","SJAG_01450","SJAG_05236","SJAG_01194","SJAG_01414","SJAG_02521","SJAG_01321","SJAG_01533","SJAG_04151","SJAG_06642","SJAG_03695","SJAG_00188","SJAG_02319","SJAG_01997","SJAG_02007","SJAG_00221","SJAG_00532","SJAG_01457","SJAG_00249","SJAG_02648","SJAG_02447","SJAG_01280","SJAG_00209","SJAG_03984","SJAG_03665","SJAG_03222","SJAG_00989","SJAG_01179","SJAG_03324","SJAG_04991","SJAG_03153","SJAG_02963","SJAG_02752","SJAG_00449","SJAG_03599","SJAG_04712","SJAG_04845","SJAG_03689","SJAG_03918","SJAG_03657","SJAG_00644","SJAG_02052","SJAG_01254","SJAG_02668","SJAG_03254","SJAG_01266","SJAG_02149","SJAG_01593","SJAG_04896","SJAG_03430","SJAG_01075","SJAG_04016","SJAG_03112","SJAG_02766","SJAG_03090","SJAG_06639","SJAG_02503","SJAG_04726","SJAG_02349","SJAG_03006","SJAG_01776","SJAG_01996","SJAG_03943","SJAG_00664","SJAG_04410","SJAG_01930","SJAG_00727","SJAG_03183","SJAG_00166","SJAG_01772","SJAG_03142","SJAG_00204","SJAG_04538","SJAG_04915","SJAG_04743","SJAG_03022","SJAG_01511","SJAG_04249","SJAG_04297","SJAG_04429","SJAG_02399","SJAG_02938","SJAG_03519","SJAG_04619","SJAG_03976","SJAG_01310","SJAG_05274","SJAG_05398","SJAG_00792","SJAG_00037","SJAG_02461","SJAG_05234","SJAG_05373","SJAG_02138","SJAG_04373","SJAG_01165","SJAG_01253","SJAG_00498","SJAG_01797","SJAG_02539","SJAG_00577","SJAG_00827","SJAG_00802","SJAG_01507","SJAG_05012","SJAG_03275","SJAG_04966","SJAG_03428","SJAG_05010","SJAG_02003","SJAG_03303","SJAG_00111","SJAG_03771","SJAG_00439","SJAG_05338","SJAG_03618","SJAG_03974","SJAG_00475","SJAG_02290","SJAG_05337","SJAG_03018","SJAG_00451","SJAG_01498","SJAG_05264","SJAG_02851","SJAG_04043","SJAG_06611","SJAG_00500","SJAG_03071","SJAG_04677","SJAG_04553","SJAG_02691","SJAG_06597","SJAG_03326","SJAG_00119","SJAG_01281","SJAG_02689","SJAG_02299","SJAG_01673","SJAG_04106","SJAG_03886","SJAG_03862","SJAG_01418","SJAG_03615","SJAG_03983","SJAG_04574","SJAG_01572","SJAG_03373","SJAG_02583","SJAG_03196","SJAG_05105","SJAG_04374","SJAG_04205","SJAG_03370","SJAG_05118","SJAG_04990","SJAG_02406","SJAG_01372","SJAG_01896","SJAG_00758","SJAG_06576","SJAG_04448","SJAG_01637","SJAG_00555","SJAG_03968","SJAG_05344","SJAG_03322","SJAG_05311","SJAG_04679","SJAG_00163","SJAG_00509","SJAG_04063","SJAG_02954","SJAG_03005","SJAG_03346","SJAG_05243","SJAG_02730","SJAG_00341","SJAG_02096","SJAG_02247","SJAG_02589","SJAG_03613","SJAG_00181","SJAG_03752","SJAG_00309","SJAG_05242","SJAG_06599","SJAG_00561","SJAG_04213","SJAG_00552","SJAG_01740","SJAG_01694","SJAG_01212","SJAG_04425","SJAG_04054","SJAG_01765","SJAG_02169","SJAG_03051","SJAG_03509","SJAG_00668","SJAG_00237","SJAG_04407","SJAG_02629","SJAG_00072","SJAG_04336","SJAG_04913","SJAG_02709","SJAG_00386","SJAG_03697","SJAG_05273","SJAG_03658","SJAG_03175","SJAG_01313","SJAG_02746","SJAG_01140","SJAG_04434","SJAG_01560","SJAG_03744","SJAG_01854","SJAG_03225"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110731],"is_not":false,"summary":null,"term":"GO:0046914"},{"annotations":[93445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046870"},{"annotations":[111116,113577,102927,103926,103557,98201,115170,88512,87713,84939,92360,96227,113146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005507"},{"annotations":[109966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008199"},{"annotations":[96643,100810,109967,89023,97295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008198"},{"annotations":[90135,103602,108617,100834,87867,85738,113450,94918,108511,99874,108878,103449,97607,99479,110484,107794,105935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005506"},{"annotations":[87614,85057,95915,101819,111745,84630,109291,101971,93425,84578,84324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030145"},{"annotations":[91495,108512,92897,87510,115088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016151"},{"annotations":[86658,100439,90283,99561,102938,109394,101696,93607,87704,88804,101374,112799,85832,114935,91080,85676,86377,94385,110663,109049,58283,86799,110087,99503,88702,89792,101795,110324,61091,98310,111342,89636,112303,92763,101796,106027,101822,101187,86321,98659,88802,86278,93914,95571,85116,97397,103652,92676,105833,106037,107782,110407,104460,113380,85884,94641,99488,88035,111720,112079,101862,106753,113851,107138,87928,98875,112566,106976,84687,84105,97396,106282,110697,114527,101702,86252,101961,87036,67614,106944,111224,112165,88803,101362,84482,70489,94576,94610,111113,104076,65810,99105,96196,101112,109046,84976,84538,84706,93608,110298,112800,110111,114941,109481,106960,99639,93005,103940,100528,109047,97771,97850,111634,92860,85417,100812,102830,85378,106574,83469,84574,101889,104949,109356,88527,85972,98299,109589,109657,113293,95470,114813,114114,105572,83677,94598,100319,103022,85271,90211,105300,109048,93609,97562,104124,91796,110698,101304,98407,110531,111750,57465,96741,99939,85606,87598,89381,96329,84650,68095,108059,87700,107074,109367,110732,57900,88805,109798,106306,91887,104450,57098,93605,86620,88718,89425,84394,92119,88098,97259,95328,90423,95464,101078,101890,103428,104090,109045,85800,65583,111777,112381,112705,93606,110110,113368,58545,108167,85624,90588,89085,109749,109769,92593,97379,97532,99656,108900,111817,114442,84716,107214,112692,90139,74028,102890,61350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008270"}]},"cv_name":"molecular_function","definition":"Binding to a transition metal ions; a transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion binding","termid":"GO:0046872"}],"gene_count":254,"genes_by_uniquename":{"SJAG_00037":null,"SJAG_00072":null,"SJAG_00111":null,"SJAG_00119":null,"SJAG_00163":null,"SJAG_00166":null,"SJAG_00181":null,"SJAG_00188":null,"SJAG_00204":null,"SJAG_00209":null,"SJAG_00221":null,"SJAG_00237":null,"SJAG_00249":null,"SJAG_00309":null,"SJAG_00341":null,"SJAG_00386":null,"SJAG_00406":null,"SJAG_00439":null,"SJAG_00449":null,"SJAG_00451":null,"SJAG_00475":null,"SJAG_00483":null,"SJAG_00498":null,"SJAG_00500":null,"SJAG_00509":null,"SJAG_00532":null,"SJAG_00552":null,"SJAG_00555":null,"SJAG_00561":null,"SJAG_00577":null,"SJAG_00642":null,"SJAG_00644":null,"SJAG_00664":null,"SJAG_00668":null,"SJAG_00717":null,"SJAG_00727":null,"SJAG_00742":null,"SJAG_00758":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00827":null,"SJAG_00865":null,"SJAG_00923":null,"SJAG_00926":null,"SJAG_00989":null,"SJAG_01075":null,"SJAG_01088":null,"SJAG_01140":null,"SJAG_01165":null,"SJAG_01179":null,"SJAG_01194":null,"SJAG_01212":null,"SJAG_01253":null,"SJAG_01254":null,"SJAG_01266":null,"SJAG_01280":null,"SJAG_01281":null,"SJAG_01310":null,"SJAG_01313":null,"SJAG_01321":null,"SJAG_01372":null,"SJAG_01414":null,"SJAG_01418":null,"SJAG_01450":null,"SJAG_01457":null,"SJAG_01498":null,"SJAG_01507":null,"SJAG_01511":null,"SJAG_01533":null,"SJAG_01560":null,"SJAG_01572":null,"SJAG_01593":null,"SJAG_01637":null,"SJAG_01673":null,"SJAG_01694":null,"SJAG_01740":null,"SJAG_01765":null,"SJAG_01772":null,"SJAG_01776":null,"SJAG_01797":null,"SJAG_01854":null,"SJAG_01896":null,"SJAG_01930":null,"SJAG_01992":null,"SJAG_01996":null,"SJAG_01997":null,"SJAG_02003":null,"SJAG_02007":null,"SJAG_02043":null,"SJAG_02048":null,"SJAG_02052":null,"SJAG_02096":null,"SJAG_02138":null,"SJAG_02149":null,"SJAG_02169":null,"SJAG_02247":null,"SJAG_02290":null,"SJAG_02298":null,"SJAG_02299":null,"SJAG_02319":null,"SJAG_02347":null,"SJAG_02349":null,"SJAG_02399":null,"SJAG_02406":null,"SJAG_02447":null,"SJAG_02461":null,"SJAG_02503":null,"SJAG_02521":null,"SJAG_02539":null,"SJAG_02569":null,"SJAG_02575":null,"SJAG_02583":null,"SJAG_02589":null,"SJAG_02629":null,"SJAG_02648":null,"SJAG_02668":null,"SJAG_02689":null,"SJAG_02691":null,"SJAG_02709":null,"SJAG_02730":null,"SJAG_02746":null,"SJAG_02752":null,"SJAG_02766":null,"SJAG_02851":null,"SJAG_02908":null,"SJAG_02938":null,"SJAG_02954":null,"SJAG_02956":null,"SJAG_02963":null,"SJAG_03005":null,"SJAG_03006":null,"SJAG_03018":null,"SJAG_03022":null,"SJAG_03029":null,"SJAG_03051":null,"SJAG_03071":null,"SJAG_03090":null,"SJAG_03112":null,"SJAG_03142":null,"SJAG_03153":null,"SJAG_03175":null,"SJAG_03183":null,"SJAG_03196":null,"SJAG_03222":null,"SJAG_03225":null,"SJAG_03254":null,"SJAG_03275":null,"SJAG_03286":null,"SJAG_03303":null,"SJAG_03322":null,"SJAG_03324":null,"SJAG_03326":null,"SJAG_03346":null,"SJAG_03370":null,"SJAG_03373":null,"SJAG_03398":null,"SJAG_03428":null,"SJAG_03430":null,"SJAG_03509":null,"SJAG_03519":null,"SJAG_03538":null,"SJAG_03599":null,"SJAG_03613":null,"SJAG_03615":null,"SJAG_03618":null,"SJAG_03657":null,"SJAG_03658":null,"SJAG_03665":null,"SJAG_03689":null,"SJAG_03695":null,"SJAG_03697":null,"SJAG_03744":null,"SJAG_03752":null,"SJAG_03761":null,"SJAG_03771":null,"SJAG_03831":null,"SJAG_03862":null,"SJAG_03886":null,"SJAG_03918":null,"SJAG_03943":null,"SJAG_03968":null,"SJAG_03974":null,"SJAG_03976":null,"SJAG_03983":null,"SJAG_03984":null,"SJAG_04016":null,"SJAG_04043":null,"SJAG_04048":null,"SJAG_04054":null,"SJAG_04063":null,"SJAG_04106":null,"SJAG_04129":null,"SJAG_04151":null,"SJAG_04189":null,"SJAG_04205":null,"SJAG_04213":null,"SJAG_04249":null,"SJAG_04297":null,"SJAG_04336":null,"SJAG_04353":null,"SJAG_04373":null,"SJAG_04374":null,"SJAG_04407":null,"SJAG_04410":null,"SJAG_04414":null,"SJAG_04425":null,"SJAG_04429":null,"SJAG_04434":null,"SJAG_04448":null,"SJAG_04516":null,"SJAG_04538":null,"SJAG_04553":null,"SJAG_04574":null,"SJAG_04619":null,"SJAG_04677":null,"SJAG_04679":null,"SJAG_04712":null,"SJAG_04726":null,"SJAG_04743":null,"SJAG_04845":null,"SJAG_04896":null,"SJAG_04913":null,"SJAG_04915":null,"SJAG_04966":null,"SJAG_04990":null,"SJAG_04991":null,"SJAG_05010":null,"SJAG_05012":null,"SJAG_05105":null,"SJAG_05118":null,"SJAG_05173":null,"SJAG_05234":null,"SJAG_05236":null,"SJAG_05242":null,"SJAG_05243":null,"SJAG_05264":null,"SJAG_05273":null,"SJAG_05274":null,"SJAG_05311":null,"SJAG_05337":null,"SJAG_05338":null,"SJAG_05343":null,"SJAG_05344":null,"SJAG_05345":null,"SJAG_05353":null,"SJAG_05373":null,"SJAG_05398":null,"SJAG_06576":null,"SJAG_06597":null,"SJAG_06599":null,"SJAG_06611":null,"SJAG_06639":null,"SJAG_06642":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0046872"}],"interesting_parent_ids":["GO:0046872","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"transition metal ion binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0046914","terms_by_termid":{"GO:0005506":null,"GO:0005507":null,"GO:0008198":null,"GO:0008199":null,"GO:0008270":null,"GO:0016151":null,"GO:0030145":null,"GO:0046870":null,"GO:0046914":null}}


id: GO:0106136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change in the structure or function of a symbiont organism, mediated by secretion of lectins which bind to the bacterial surface. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:30049880","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological process involved in interaction with symbiont","termid":"GO:0051702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lectin-induced modified bacterial internalization","synonyms":[{"name":"LIMBI","type":"exact"}],"termid":"GO:0106136"}


id: PBO:0056459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS1 proto-oncogene like, G protein-coupled receptor","termid":"PBO:0056459"}


id: GO:0034432
data:
  {"annotated_genes":["SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84794],"is_not":false,"summary":null,"term":"GO:0034432"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: P1-P6-bis(5'-adenosyl) pentaphosphate + H2O = AMP + adenosine 5'-tetraphosphate.","definition_xrefs":["PMID:10085096","PMID:9450008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"bis(5'-adenosyl)-pentaphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"AP(5)A hydrolase activity","type":"exact"},{"name":"AP-5-A hydrolase activity","type":"exact"},{"name":"AP5A hydrolase activity","type":"exact"},{"name":"Ap5a pyrophosphohydrolase activity","type":"exact"},{"name":"diadenosine 5',5'''-P1,P6-pentaphosphate hydrolase activity","type":"exact"}],"termid":"GO:0034432","terms_by_termid":{"GO:0034432":null}}


id: GO:0090015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of leaflet formation as a result of the series of molecular signals generated in response to detection of auxin.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin-activated signaling pathway","termid":"GO:0009734"},{"relation_name":"is_a","term_name":"regulation of leaflet formation","termid":"GO:0090016"},{"relation_name":"is_a","term_name":"positive regulation of leaf development","termid":"GO:1905623"},{"relation_name":"positively_regulates","term_name":"leaflet formation","termid":"GO:0090014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of leaflet formation by auxin mediated signaling pathway","synonyms":[{"name":"positive regulation of leaflet formation by auxin mediated signalling pathway","type":"exact"}],"termid":"GO:0090015"}


id: GO:0000731
data:
  {"annotated_genes":["SJAG_02667","SJAG_00611","SJAG_00153","SJAG_04877","SJAG_16460","SJAG_03906","SJAG_05197","SJAG_04190","SJAG_04791","SJAG_02818","SJAG_00406","SJAG_00814","SJAG_00573","SJAG_02199","SJAG_04089"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91126],"is_not":false,"summary":null,"term":"GO:0000731"},{"annotations":[105179,98905,91307,100993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904161"},{"annotations":[100304,98955,98975,113410,100067,95373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070987"},{"annotations":[91948,98956,113411,100305,109649,98976,100068,95374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042276"},{"annotations":[107839],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1904332"},{"annotations":[113412,100072,94383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019985"}]},"cv_name":"biological_process","definition":"Synthesis of DNA that proceeds from the broken 3' single-strand DNA end and uses the homologous intact duplex as the template.","definition_xrefs":["PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA biosynthetic process","termid":"GO:0071897"},{"relation_name":"part_of","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00406":null,"SJAG_00573":null,"SJAG_00611":null,"SJAG_00814":null,"SJAG_02199":null,"SJAG_02667":null,"SJAG_02818":null,"SJAG_03906":null,"SJAG_04089":null,"SJAG_04190":null,"SJAG_04791":null,"SJAG_04877":null,"SJAG_05197":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"DNA synthesis involved in DNA repair","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA repair synthesis","type":"broad"},{"name":"DNA synthesis during DNA repair","type":"related"},{"name":"mitotic DNA repair synthesis","type":"narrow"}],"termid":"GO:0000731","terms_by_termid":{"GO:0000731":null,"GO:0019985":null,"GO:0042276":null,"GO:0070987":null,"GO:1904161":null,"GO:1904332":null}}


id: PBO:0034086
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-towards","termid":"PBO:0034086"}


id: GO:0047102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + NAD+ + 2-aminomuconate semialdehyde = NADH + 2-amino-muconate.","definition_xrefs":["EC:1.2.1.32","MetaCyc:1.2.1.32-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"aminomuconate-semialdehyde dehydrogenase activity","secondary_identifiers":["RHEA:14469","Reactome:R-HSA-71239","UM-BBD_reactionID:r1434"],"synonyms":[{"name":"2-aminomuconate semialdehyde dehydrogenase activity","type":"related"},{"name":"2-aminomuconate-6-semialdehyde:NAD+ 6-oxidoreductase activity","type":"related"},{"name":"2-hydroxymuconate semialdehyde dehydrogenase activity","type":"related"},{"name":"2-hydroxymuconic acid semialdehyde dehydrogenase activity","type":"related"},{"name":"2-hydroxymuconic semialdehyde dehydrogenase activity","type":"related"},{"name":"alpha-aminomuconic epsilon-semialdehyde dehydrogenase activity","type":"related"},{"name":"alpha-hydroxymuconic epsilon-semialdehyde dehydrogenase activity","type":"related"}],"termid":"GO:0047102"}


id: PBO:0043669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q10B pseudogene 1","termid":"PBO:0043669"}


id: SO:0001398
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified histidine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_histidine","secondary_identifiers":["MOD:00909"],"synonyms":[{"name":"ModHis","type":"exact"},{"name":"modified L histidine","type":"exact"},{"name":"modified L-histidine","type":"exact"}],"termid":"SO:0001398"}


id: PBO:0090867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk14","termid":"PBO:0090867"}


id: GO:0042593
data:
  {"annotated_genes":["SJAG_01754","SJAG_01254","SJAG_04334","SJAG_04026","SJAG_02444","SJAG_01699","SJAG_00472","SJAG_04312","SJAG_03081","SJAG_04495","SJAG_00574"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102909,111614,90298,97919,105586,102555,105082,101964,112654],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"},{"annotations":[90597,94068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001678"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of glucose within an organism or cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate homeostasis","termid":"GO:0033500"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00574":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null,"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glucose homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042593","terms_by_termid":{"GO:0001678":null,"GO:0010619":null}}


id: GO:0042043
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neurexin, a synaptic cell surface protein related to latrotoxin receptor, laminin and agrin. Neurexins act as cell recognition molecules at nerve terminals.","definition_xrefs":["PMID:18923512","GOC:curators","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"neurexin family protein binding","secondary_identifiers":["GO:0019963"],"synonyms":[{"name":"neuroligin","type":"related"}],"termid":"GO:0042043"}


id: PBO:0051194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3/OR16-12 (non-functional)","termid":"PBO:0051194"}


id: GO:0070432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the nucleotide-binding oligomerization domain containing 2 (NOD2) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0070424"},{"relation_name":"regulates","term_name":"nucleotide-binding oligomerization domain containing 2 signaling pathway","termid":"GO:0070431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway","synonyms":[{"name":"regulation of NOD2 signaling pathway","type":"exact"},{"name":"regulation of nucleotide-binding oligomerization domain containing 2 signalling pathway","type":"exact"}],"termid":"GO:0070432"}


id: GO:0033131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glucokinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a glucose molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucose metabolic process","termid":"GO:0010906"},{"relation_name":"is_a","term_name":"regulation of hexokinase activity","termid":"GO:1903299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of glucokinase activity","synonyms":[{"name":"glucokinase regulator","type":"narrow"}],"termid":"GO:0033131"}


id: PBO:0108964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule associated protein 1A","termid":"PBO:0108964"}


id: FYPO:0005655
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more iron assimilation RNAs measured in a cell is normal (i.e. indistinguishable from wild type). Iron assimilation RNAs are transcribed from genes whose products are involved in any process in which iron is solubilized and transported into a cell.","definition_xrefs":["PomBase:mah","PMID:25806539"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal level of iron assimilation gene mRNA during vegetative growth","synonyms":[{"name":"normal iron assimilation gene mRNA accumulation during vegetative growth","type":"related"},{"name":"normal level of iron assimilation gene RNA during vegetative growth","type":"exact"},{"name":"normal level of iron assimilation gene mRNA during mitotic cell cycle","type":"related"},{"name":"normal level of iron assimilation gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0005655"}


id: FYPO:0007891
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a smaller portion of the mating-type region than normal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased spatial extent of heterochromatin assembly","termid":"FYPO:0005849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"decreased spatial extent of mating-type region heterochromatin assembly","termid":"FYPO:0007891"}


id: PBO:0045220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C9","termid":"PBO:0045220"}


id: _global:has_disposition
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"a relation between an independent continuant (the bearer) and a disposition, in which the disposition specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"has_characteristic","termid":"_global:has_characteristic"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_disposition","secondary_identifiers":["RO:0000091"],"termid":"_global:has_disposition"}


id: PBO:0108981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated microtubule inner protein 5","termid":"PBO:0108981"}


id: PBO:0052399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kin17 DNA and RNA binding protein","termid":"PBO:0052399"}


id: GO:0080169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of boron obtained from boron-containing substances.","definition_xrefs":["PMID:20059736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"},{"relation_name":"is_a","term_name":"cellular response to chemical stress","termid":"GO:0062197"},{"relation_name":"is_a","term_name":"cellular response to boron-containing substance levels","termid":"GO:0080029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to boron-containing substance deprivation","synonyms":[{"name":"cellular response to boron deprivation","type":"exact"},{"name":"cellular response to boron starvation","type":"exact"}],"termid":"GO:0080169"}


id: PBO:0079258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 29","termid":"PBO:0079258"}


id: GO:0051925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the directed movement of calcium ions via a voltage-gated calcium channel.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of calcium ion transport via voltage-gated calcium channel activity (obsolete GO:0051925)","synonyms":[{"name":"regulation of calcium ion transport via voltage-gated calcium channel activity","type":"exact"},{"name":"regulation of calcium transport via voltage-gated calcium channel","type":"exact"}],"termid":"GO:0051925"}


id: GO:0050851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the cross-linking of an antigen receptor on a B or T cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-activating cell surface receptor signaling pathway","termid":"GO:0002429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"antigen receptor-mediated signaling pathway","synonyms":[{"name":"antigen receptor-mediated signalling pathway","type":"exact"}],"termid":"GO:0050851"}


id: PBO:0030714
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glucosyltransferase_activity","termid":"PBO:0030714"}


id: PBO:0044132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP1 antisense RNA","termid":"PBO:0044132"}


id: GO:0010146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fructan a polysaccharide consisting of fructose residues.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"fructan metabolic process","termid":"GO:0010145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"fructan biosynthetic process","secondary_identifiers":["MetaCyc:PWY-822"],"synonyms":[{"name":"fructan anabolism","type":"exact"},{"name":"fructan biosynthesis","type":"exact"},{"name":"fructan formation","type":"exact"},{"name":"fructan synthesis","type":"exact"},{"name":"levan biosynthesis","type":"exact"},{"name":"levan biosynthetic process","type":"exact"}],"termid":"GO:0010146"}


id: PBO:0003516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protein ligase E3 component human N-recognin 7 homolog Mlo2","termid":"PBO:0003516"}


id: GO:1905721
data:
  {"annotated_genes":["SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93047],"is_not":false,"summary":null,"term":"GO:1905721"}]},"cv_name":"cellular_component","definition":"Any microtubule end that is part of a mitotic spindle astral microtubule.","definition_xrefs":["GOC:TermGenie","GO_REF:0000064","PMID:11007487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule end","termid":"GO:1990752"},{"relation_name":"part_of","term_name":"mitotic spindle astral microtubule","termid":"GO:0061673"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0072686"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0072686","GO:0015630"],"is_obsolete":false,"name":"mitotic spindle astral microtubule end","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitotic spindle astral microtubule tip","type":"exact"}],"termid":"GO:1905721","terms_by_termid":{"GO:1905721":null}}


id: GO:2000176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pro-T cell differentiation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell differentiation","termid":"GO:0045582"},{"relation_name":"is_a","term_name":"positive regulation of lymphoid progenitor cell differentiation","termid":"GO:1905458"},{"relation_name":"is_a","term_name":"regulation of pro-T cell differentiation","termid":"GO:2000174"},{"relation_name":"positively_regulates","term_name":"pro-T cell differentiation","termid":"GO:0002572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of pro-T cell differentiation","synonyms":[{"name":"positive regulation of pro-T lymphocyte differentiation","type":"exact"}],"termid":"GO:2000176"}


id: PBO:0002796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP, GTPase activator towards Rho/Rac/Cdc42-like small GTPases (predicted)","termid":"PBO:0002796"}


id: PBO:0063855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein interacting with PRKCA 1","termid":"PBO:0063855"}


id: SO:0000096
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from proplastid sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"proplastid_sequence","termid":"SO:0000748"},{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proplastid_gene","synonyms":[{"name":"proplastid gene","type":"exact"}],"termid":"SO:0000096"}


id: GO:1990817
data:
  {"annotated_genes":["SJAG_01176","SJAG_02383","SJAG_04946","SJAG_02370","SJAG_00797","SJAG_03257","SJAG_02720","SJAG_02725"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67997,84460,87731,92327,96165,99912,107380,114064],"is_not":false,"summary":null,"term":"GO:1990817"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + RNA(n) = diphosphate + RNA(n)-3'-adenine ribonucleotide. The primer may be an RNA or DNA fragment, or oligo(A) bearing a 3'-OH terminal group.","definition_xrefs":["RHEA:11332","PMID:13965521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00797":null,"SJAG_01176":null,"SJAG_02370":null,"SJAG_02383":null,"SJAG_02720":null,"SJAG_02725":null,"SJAG_03257":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016779","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"poly(A) RNA polymerase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:2.7.7.19","Reactome:R-HSA-72185","MetaCyc:POLYNUCLEOTIDE-ADENYLYLTRANSFERASE-RXN","Reactome:R-HSA-9833031"],"synonyms":[{"name":"NTP polymerase activity","type":"broad"},{"name":"RNA adenylating enzyme","type":"exact"},{"name":"RNA adenyltransferase activity","type":"exact"},{"name":"RNA adenylyltransferase activity","type":"exact"},{"name":"poly(A) polymerase activity","type":"related"},{"name":"polynucleotide adenylyltransferase activity","type":"exact"}],"termid":"GO:1990817","terms_by_termid":{"GO:1990817":null}}


id: GO:1904124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a microglial cell from one site to another.","definition_xrefs":["PMID:19100238","GOC:nc","GOC:BHF","GO_REF:0000091","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell migration","termid":"GO:0008347"},{"relation_name":"is_a","term_name":"macrophage migration","termid":"GO:1905517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microglial cell migration","termid":"GO:1904124"}


id: GO:0007020
data:
  {"annotated_genes":["SJAG_02886","SJAG_00856","SJAG_01215","SJAG_01756","SJAG_02737","SJAG_02609","SJAG_03835","SJAG_07018","SJAG_02761","SJAG_03540"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104921,105679,106657],"is_not":false,"summary":null,"term":"GO:0007020"},{"annotations":[113032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030954"},{"annotations":[96152,96453,113279,97057,102508,113037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051415"},{"annotations":[114755,97058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051417"}]},"cv_name":"biological_process","definition":"The process in which tubulin alpha-beta heterodimers begin aggregation to form an oligomeric tubulin structure (a microtubule seed). Microtubule nucleation is the initiating step in the formation of a microtubule in the absence of any existing microtubules ('de novo' microtubule formation).","definition_xrefs":["GOC:go_curators","PMID:12517712","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"part_of","term_name":"microtubule polymerization","termid":"GO:0046785"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01215":null,"SJAG_01756":null,"SJAG_02609":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0065003","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"microtubule nucleation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Microtubule_nucleation"],"termid":"GO:0007020","terms_by_termid":{"GO:0007020":null,"GO:0030954":null,"GO:0051415":null,"GO:0051417":null}}


id: GO:0051720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + DNA containing CpNpG = S-adenosyl-L-homocysteine + DNA containing 5-MeCpNpG.","definition_xrefs":["PMID:15689527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA (cytosine-5-)-methyltransferase activity","termid":"GO:0003886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0016740","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"DNA (cytosine-5-)-methyltransferase activity, acting on CpNpG substrates","termid":"GO:0051720"}


id: PBO:0070725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 30","termid":"PBO:0070725"}


id: PBO:0005668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell end marker Tea1","termid":"PBO:0005668"}


id: PBO:0083113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase eta; involved in translesion synthesis during post-replication repair; catalyzes the synthesis of DNA opposite cyclobutane pyrimidine dimers and other lesions; involved in formation of post-replicative damage-induced genome-wide cohesion; may also have a role in protection against mitochondrial mutagenesis; may be involved in meiosis; mutations in human pol eta are responsible for XPV","termid":"PBO:0083113"}


id: FYPO:0004315
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, or morphology of all or part of the microtubule cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton","termid":"FYPO:0002399"},{"relation_name":"output_of","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000054","FYPO:0002399","FYPO:0001320"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton during vegetative growth","synonyms":[{"name":"abnormal microtubule cytoskeleton during mitotic cell cycle","type":"related"},{"name":"abnormal microtubule cytoskeleton physical object quality during vegetative growth","type":"exact"},{"name":"disorganized microtubule cytoskeleton during vegetative growth","type":"related"}],"termid":"FYPO:0004315"}


id: SO:0001512
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A quality of a chromosomal insertion,.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alteration_attribute","termid":"SO:0001508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertion_attribute","synonyms":[{"name":"insertion attribute","type":"exact"}],"termid":"SO:0001512"}


id: GO:0047922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,5-dihydroxybenzoate + O2 = 3-maleylpyruvate + H+.","definition_xrefs":["RHEA:18237","EC:1.13.11.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"gentisate 1,2-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R02656","MetaCyc:GENTISATE-12-DIOXYGENASE-RXN"],"synonyms":[{"name":"2,5-dihydroxybenzoate dioxygenase activity","type":"related"},{"name":"gentisate dioxygenase activity","type":"related"},{"name":"gentisate oxygenase activity","type":"related"},{"name":"gentisate:oxygen 1,2-oxidoreductase (decyclizing)","type":"related"},{"name":"gentisic acid oxidase activity","type":"related"}],"termid":"GO:0047922"}


id: PBO:0053369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 290","termid":"PBO:0053369"}


id: FYPO:0003089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at sites within the eukaryotic rDNA repeat spacer is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"},{"relation_name":"is_a","term_name":"abnormal replication fork arrest","termid":"FYPO:0003088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0001320","FYPO:0000293","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal replication fork arrest at rDNA repeats","synonyms":[{"name":"abnormal replication fork arrest at rDNA repeats during mitotic cell cycle","type":"related"},{"name":"abnormal replication fork arrest at rDNA repeats during vegetative growth","type":"exact"},{"name":"abnormal replication fork arrest at ribosomal DNA repeats","type":"exact"}],"termid":"FYPO:0003089"}


id: GO:0004581
data:
  {"annotated_genes":["SJAG_00394"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107163],"is_not":false,"summary":null,"term":"GO:0004581"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + dolichyl phosphate = UDP + dolichyl beta-D-glucosyl phosphate.","definition_xrefs":["EC:2.4.1.117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00394":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"dolichyl-phosphate beta-glucosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:15401","MetaCyc:2.4.1.117-RXN","Reactome:R-HSA-446214"],"synonyms":[{"name":"UDP-glucose dolichyl-phosphate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:dolichol phosphate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:dolicholphosphoryl glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:dolichyl monophosphate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:dolichyl phosphate glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:dolichyl-phosphate beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:dolichyl-phosphate beta-D-glucosyltransferase activity","type":"related"},{"name":"polyprenyl phosphate:UDP-D-glucose glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-dolichol glucosyltransferase activity","type":"related"}],"termid":"GO:0004581","terms_by_termid":{"GO:0004581":null}}


id: PBO:0068343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 114","termid":"PBO:0068343"}


id: GO:0017017
data:
  {"annotated_genes":["SJAG_03263"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99888],"is_not":false,"summary":null,"term":"GO:0017017"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: MAP kinase serine/threonine/tyrosine phosphate + H2O = MAP kinase serine/threonine/tyrosine + phosphate.","definition_xrefs":["PMID:12184814","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein tyrosine/serine/threonine phosphatase activity","termid":"GO:0008138"},{"relation_name":"is_a","term_name":"MAP kinase phosphatase activity","termid":"GO:0033549"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03263":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004721"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824","GO:0004721","GO:0140096"],"is_obsolete":false,"name":"MAP kinase tyrosine/serine/threonine phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dual-specificity MAP kinase phosphatase activity","type":"exact"}],"termid":"GO:0017017","terms_by_termid":{"GO:0017017":null}}


id: GO:0090370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of cholesterol efflux. Cholesterol efflux is the directed movement of cholesterol, cholest-5-en-3-beta-ol, out of a cell or organelle.","definition_xrefs":["GOC:tb","GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cholesterol efflux","termid":"GO:0010874"},{"relation_name":"is_a","term_name":"negative regulation of cholesterol transport","termid":"GO:0032375"},{"relation_name":"negatively_regulates","term_name":"cholesterol efflux","termid":"GO:0033344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of cholesterol efflux","termid":"GO:0090370"}


id: PBO:0087053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L25; primary rRNA-binding ribosomal protein component of large ribosomal subunit; binds to 25S rRNA via a conserved C-terminal motif; homologous to mammalian ribosomal protein L23A and bacterial L23","termid":"PBO:0087053"}


id: GO:0045664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neuron differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"neuron differentiation","termid":"GO:0030182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuron differentiation","termid":"GO:0045664"}


id: FYPO:0004447
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is not normally found in the prospore membrane is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein","termid":"FYPO:0003452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"protein mislocalized to prospore membrane","synonyms":[{"name":"protein mislocalised to prospore membrane","type":"exact"},{"name":"protein mislocalized to forespore membrane","type":"exact"}],"termid":"FYPO:0004447"}


id: GO:0061081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the production of a cytokine that contributes to the immune response.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production involved in immune response","termid":"GO:0002720"},{"relation_name":"positively_regulates","term_name":"myeloid leukocyte cytokine production","termid":"GO:0061082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of myeloid leukocyte cytokine production involved in immune response","synonyms":[{"name":"positive regulation of myeloid cell cytokine production involved in immune response","type":"related"}],"termid":"GO:0061081"}


id: PBO:0062605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily Q member 2 pseudogene","termid":"PBO:0062605"}


id: PBO:0031494
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_filament_organization_during_vegetative_growth","termid":"PBO:0031494"}


id: PBO:0018255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Med27","termid":"PBO:0018255"}


id: PBO:0076555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tax1 binding protein 3","termid":"PBO:0076555"}


id: FYPO:0004168
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable after entering stationary phase, under conditions of glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal viability in stationary phase","termid":"FYPO:0001310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal viability in stationary phase during glucose starvation","synonyms":[{"name":"normal cell population viability in stationary phase during glucose starvation","type":"exact"},{"name":"normal viability in stationary phase during glucose depletion","type":"exact"},{"name":"normal viability in stationary phase during glucose deprivation","type":"exact"},{"name":"normal viability in stationary phase during glucose limitation","type":"related"}],"termid":"FYPO:0004168"}


id: PBO:0004662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase epsilon subunit (predicted)","termid":"PBO:0004662"}


id: SO:0001340
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"1_2prime_O_dimethylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one_two_prime_O_dimethylguanosine","secondary_identifiers":["RNAMOD:096"],"synonyms":[{"name":"1,2'-O-dimethylguanosine","type":"exact"},{"name":"m1Gm","type":"exact"},{"name":"one two prime O dimethylguanosine","type":"exact"}],"termid":"SO:0001340"}


id: PBO:0069016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 260, pseudogene","termid":"PBO:0069016"}


id: PBO:0086634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; proposed to be involved in resistance to streptozotocin and camptothecin","termid":"PBO:0086634"}


id: PBO:0078120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 8-2","termid":"PBO:0078120"}


id: PBO:0043222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride channel accessory 1","termid":"PBO:0043222"}


id: GO:1900809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fumigaclavine C, a fungal ergot alkaloid.","definition_xrefs":["PMID:23435153","GOC:TermGenie","PMID:26972831","GOC:di","PMID:15933009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ergot alkaloid biosynthetic process","termid":"GO:0035837"},{"relation_name":"is_a","term_name":"acetate ester biosynthetic process","termid":"GO:1900620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"fumigaclavine C biosynthetic process","secondary_identifiers":["GO:1900807"],"synonyms":[{"name":"fumigaclavine C anabolism","type":"exact"},{"name":"fumigaclavine C biosynthesis","type":"exact"},{"name":"fumigaclavine C formation","type":"exact"},{"name":"fumigaclavine C metabolic process","type":"broad"},{"name":"fumigaclavine C metabolism","type":"broad"},{"name":"fumigaclavine C synthesis","type":"exact"}],"termid":"GO:1900809"}


id: PR:Q10292
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mek1 gene.","definition_xrefs":["UniProtKB:Q10292","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis-specific serine/threonine-protein kinase mek1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.03","synonyms":[{"name":"Spom972h-mek1","type":"exact"}],"termid":"PR:Q10292"}


id: GO:1902631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of membrane hyperpolarization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23223304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of membrane hyperpolarization","termid":"GO:1902630"},{"relation_name":"negatively_regulates","term_name":"membrane hyperpolarization","termid":"GO:0060081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of membrane hyperpolarization","synonyms":[{"name":"down regulation of membrane hyperpolarization","type":"exact"},{"name":"down-regulation of membrane hyperpolarization","type":"exact"},{"name":"downregulation of membrane hyperpolarization","type":"exact"},{"name":"inhibition of membrane hyperpolarization","type":"narrow"}],"termid":"GO:1902631"}


id: PBO:0082188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alcohol dehydrogenase isoenzyme type IV; dimeric enzyme demonstrated to be zinc-dependent despite sequence similarity to iron-activated alcohol dehydrogenases; transcription is induced in response to zinc deficiency","termid":"PBO:0082188"}


id: GO:0050888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of where on the body surface, within the body or in the environment a stimulus originates.","definition_xrefs":["ISBN:0721619908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory processing","termid":"GO:0050893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of stimulus location","termid":"GO:0050888"}


id: FYPO:0006103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are shorter than normal during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short cytoplasmic microtubules","termid":"FYPO:0002760"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during mitotic interphase","termid":"FYPO:0003625"},{"relation_name":"is_a","term_name":"abnormal interphase microtubules","termid":"FYPO:0006101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0002399","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"short interphase microtubules","synonyms":[{"name":"short cytoplasmic microtubules during interphase of mitotic cell cycle","type":"exact"},{"name":"short cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"short interphase cytoplasmic microtubules","type":"exact"},{"name":"short interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0006103"}


id: PBO:0001645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic thioredoxin Trx1","termid":"PBO:0001645"}


id: GO:0003281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the ventricular septum over time from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac septum development","termid":"GO:0003279"},{"relation_name":"part_of","term_name":"cardiac ventricle development","termid":"GO:0003231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular septum development","synonyms":[{"name":"interventricular septum development","type":"exact"},{"name":"septum inferius development","type":"narrow"}],"termid":"GO:0003281"}


id: RO:0002093
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ends_during","termid":"RO:0002093"}


id: PBO:0086352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PUF family mRNA-binding protein; Pumilio homology domain confers RNA binding activity; preferentially binds mRNAs encoding membrane-associated proteins; binding site composed of two UAAU tetranucleotides, separated by a 3-nt linker; PUF2 has a paralog, JSN1, that arose from the whole genome duplication","termid":"PBO:0086352"}


id: PBO:0043059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chordin","termid":"PBO:0043059"}


id: PBO:0088963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg13","termid":"PBO:0088963"}


id: GO:0032656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-13 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-13 production","termid":"GO:0032616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-13 production","secondary_identifiers":["GO:2000665","GO:0045366"],"synonyms":[{"name":"regulation of IL-13 production","type":"exact"},{"name":"regulation of interleukin-13 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-13 secretion","type":"narrow"}],"termid":"GO:0032656"}


id: GO:1905012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of 'de novo' NAD biosynthetic process from tryptophan.","definition_xrefs":["GOC:bf","PMID:12140278","GOC:PARL","GOC:TermGenie","PMID:19843166","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tryptophan metabolic process","termid":"GO:0090357"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide biosynthetic process","termid":"GO:1900371"},{"relation_name":"is_a","term_name":"regulation of NAD metabolic process","termid":"GO:1902688"},{"relation_name":"regulates","term_name":"'de novo' NAD biosynthetic process from tryptophan","termid":"GO:0034354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"regulation of 'de novo' NAD biosynthetic process from tryptophan","synonyms":[{"name":"regulation of de novo NAD biosynthetic process from tryptophan","type":"related"}],"termid":"GO:1905012"}


id: GO:0005771
data:
  {"annotated_genes":["SJAG_00416","SJAG_03976","SJAG_00181","SJAG_00900","SJAG_01088","SJAG_04643","SJAG_04489","SJAG_05210","SJAG_03892","SJAG_02100","SJAG_05207","SJAG_04047","SJAG_03783","SJAG_01242"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84034,84688,94027,96959,99218,99810,101814,102618,109390,110523,110953,115292],"is_not":false,"summary":null,"term":"GO:0005771"},{"annotations":[115294,88172,89987],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032585"}]},"cv_name":"cellular_component","definition":"A type of endosome in which regions of the limiting endosomal membrane invaginate to form internal vesicles; membrane proteins that enter the internal vesicles are sequestered from the cytoplasm.","definition_xrefs":["PMID:16533950","PMID:11566881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"late endosome","termid":"GO:0005770"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00181":null,"SJAG_00416":null,"SJAG_00900":null,"SJAG_01088":null,"SJAG_01242":null,"SJAG_02100":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_03976":null,"SJAG_04047":null,"SJAG_04489":null,"SJAG_04643":null,"SJAG_05207":null,"SJAG_05210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005768","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"multivesicular body","references_by_uniquename":{"GO_REF:0000107":null,"PMID:32109380":null},"secondary_identifiers":["NIF_Subcellular:sao2045955158"],"synonyms":[{"name":"MVB","type":"exact"},{"name":"MVE","type":"exact"},{"name":"multivesicular endosome","type":"exact"}],"termid":"GO:0005771","terms_by_termid":{"GO:0005771":null,"GO:0032585":null}}


id: PBO:0090859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved protein Dpc13","termid":"PBO:0090859"}


id: PBO:0040778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bestrophin 4","termid":"PBO:0040778"}


id: GO:0043524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process in neurons.","definition_xrefs":["GOC:go_curators","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"is_a","term_name":"regulation of neuron apoptotic process","termid":"GO:0043523"},{"relation_name":"negatively_regulates","term_name":"neuron apoptotic process","termid":"GO:0051402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron apoptotic process","synonyms":[{"name":"down regulation of neuron apoptosis","type":"exact"},{"name":"down-regulation of neuron apoptosis","type":"exact"},{"name":"downregulation of neuron apoptosis","type":"exact"},{"name":"inhibition of neuron apoptosis","type":"narrow"},{"name":"negative regulation of neuron apoptosis","type":"narrow"},{"name":"negative regulation of programmed cell death, neurons","type":"exact"},{"name":"neuron survival","type":"narrow"}],"termid":"GO:0043524"}


id: PBO:0086294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in mitochondrial DNA recombinational repair; also involved in interstrand cross-link repair; binds to and catalyzes the annealing of single-stranded mtDNA; oligomerizes to form rings and filaments; related to Rad52-type recombination proteins, with limited overall similarity but sharing conserved functionally important residues; component of the mitochondrial nucleoid, required for the repair of oxidative mtDNA damage and mitochondrial genome maintenance","termid":"PBO:0086294"}


id: PBO:0039218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member D1","termid":"PBO:0039218"}


id: PBO:0078951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCT) 3-1","termid":"PBO:0078951"}


id: PBO:0048679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gliomedin","termid":"PBO:0048679"}


id: PBO:0049246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRPEL2 antisense RNA 1","termid":"PBO:0049246"}


id: PBO:0087291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Silenced copy of ALPHA2 at HML; homeobox-domain protein that associates with Mcm1p in haploid cells to repress a-specific gene expression and interacts with a1p in diploid cells to repress haploid-specific gene expression","termid":"PBO:0087291"}


id: GO:0006516
data:
  {"annotated_genes":["SJAG_01858","SJAG_03032"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006058"},{"annotations":[91784,89612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a glycoprotein, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein metabolic process","termid":"GO:0009100"},{"relation_name":"is_a","term_name":"protein catabolic process","termid":"GO:0030163"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01858":null,"SJAG_03032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"glycoprotein catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycoprotein breakdown","type":"exact"},{"name":"glycoprotein catabolism","type":"exact"},{"name":"glycoprotein degradation","type":"exact"}],"termid":"GO:0006516","terms_by_termid":{"GO:0006058":null,"GO:0097466":null}}


id: GO:0045777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the force of blood traveling through the circulatory system is increased.","definition_xrefs":["GOC:go_curators","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood pressure","termid":"GO:0008217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood pressure","synonyms":[{"name":"activation of blood pressure","type":"narrow"},{"name":"stimulation of blood pressure","type":"narrow"},{"name":"up regulation of blood pressure","type":"exact"},{"name":"up-regulation of blood pressure","type":"exact"},{"name":"upregulation of blood pressure","type":"exact"}],"termid":"GO:0045777"}


id: PBO:0054982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2396","termid":"PBO:0054982"}


id: PATO:0001527
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sound amplitude which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sound quality","termid":"PATO:0001519"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quiet","termid":"PATO:0001527"}


id: PR:P87231
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A crossover junction endonuclease MUS81 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04324","PANTHER:PTHR13451:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crossover junction endonuclease mus81 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.05c","secondary_identifiers":["UniProtKB:P87231"],"synonyms":[{"name":"Spom972h-MUS81","type":"exact"}],"termid":"PR:P87231"}


id: PBO:0090891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTREC (exosome adaptor) complex subunit Red1","termid":"PBO:0090891"}


id: PBO:0087269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr protein kinase; phosphorylates several aminophospholipid translocase family members, regulating phospholipid translocation and membrane asymmetry; phosphorylates and inhibits the protein kinase Akl1p, stimulating endocytosis; phosphorylates and inhibits upstream inhibitory kinase Ypk1p; localizes to the cytoplasm, early endosome/TGN, the plasma membrane and the shmoo tip; redundant role with KIN82 in the mating pheromone response; activity stimulated by Gin4p kinase and sphingolipid MIPC","termid":"PBO:0087269"}


id: GO:0160091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of circular RNAs (circRNAs) by back-splicing circularization of pre-mRNAs in a spliceosome-dependent process.","definition_xrefs":["PMID:28625552","PMID:25768908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA splicing, via spliceosome","termid":"GO:0000398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"spliceosome-depend formation of circular RNA","termid":"GO:0160091"}


id: PBO:0090890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA exonuclease Rrp17","termid":"PBO:0090890"}


id: PBO:0005283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-silencing factor Ers1","termid":"PBO:0005283"}


id: FYPO:0000458
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation during vegetative growth","termid":"FYPO:0000457"},{"relation_name":"is_a","term_name":"abnormal histone H3-K9 methylation","termid":"FYPO:0007466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"abnormal histone H3-K9 methylation during vegetative growth","synonyms":[{"name":"abnormal histone H3 K9 methylation during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 methylation during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3K9me during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H3 K9 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000458"}


id: PBO:0055733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMO7 downstream neighbor","termid":"PBO:0055733"}


id: GO:0019300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of rhamnose, the hexose 6-deoxy-L-mannose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhamnose metabolic process","termid":"GO:0019299"},{"relation_name":"is_a","term_name":"hexose biosynthetic process","termid":"GO:0019319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"rhamnose biosynthetic process","synonyms":[{"name":"rhamnose anabolism","type":"exact"},{"name":"rhamnose biosynthesis","type":"exact"},{"name":"rhamnose formation","type":"exact"},{"name":"rhamnose synthesis","type":"exact"}],"termid":"GO:0019300"}


id: PBO:0057991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3915","termid":"PBO:0057991"}


id: GO:0007216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by glutamate binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:mah","GOC:signaling","PMID:9131252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"is_a","term_name":"glutamate receptor signaling pathway","termid":"GO:0007215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"G protein-coupled glutamate receptor signaling pathway","synonyms":[{"name":"G-protein coupled glutamate receptor signaling pathway","type":"exact"},{"name":"metabotropic glutamate receptor signaling pathway","type":"exact"},{"name":"metabotropic glutamate receptor signalling pathway","type":"exact"}],"termid":"GO:0007216"}


id: PBO:0090486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vps20 associated protein Vta1","termid":"PBO:0090486"}


id: PBO:0074313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD3 divergent transcript","termid":"PBO:0074313"}


id: PBO:0043453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNN3 divergent transcript","termid":"PBO:0043453"}


id: PBO:0004125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and cytoplasmic arginine-tRNA ligase Rrs1/Mrs1 (predicted)","termid":"PBO:0004125"}


id: GO:1903637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein insertion into mitochondrial outer membrane.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16374546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"negative regulation of intracellular protein transport","termid":"GO:0090317"},{"relation_name":"is_a","term_name":"negative regulation of protein targeting to mitochondrion","termid":"GO:1903215"},{"relation_name":"is_a","term_name":"regulation of protein insertion into mitochondrial outer membrane","termid":"GO:1903636"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to membrane","termid":"GO:1905476"},{"relation_name":"negatively_regulates","term_name":"protein insertion into mitochondrial outer membrane","termid":"GO:0045040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"negatively_regulates","termid":"GO:0006605"},{"rel_name":"negatively_regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0006810","GO:0006605","GO:0007005","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein insertion into mitochondrial outer membrane","synonyms":[{"name":"down regulation of mitochondrial outer membrane protein import","type":"exact"},{"name":"down regulation of protein import into mitochondrial outer membrane","type":"exact"},{"name":"down regulation of protein insertion into mitochondrial outer membrane","type":"exact"},{"name":"down regulation of protein transport into mitochondrial outer membrane","type":"exact"},{"name":"down-regulation of mitochondrial outer membrane protein import","type":"exact"},{"name":"down-regulation of protein import into mitochondrial outer membrane","type":"exact"},{"name":"down-regulation of protein insertion into mitochondrial outer membrane","type":"exact"},{"name":"down-regulation of protein transport into mitochondrial outer membrane","type":"exact"},{"name":"downregulation of mitochondrial outer membrane protein import","type":"exact"},{"name":"downregulation of protein import into mitochondrial outer membrane","type":"exact"},{"name":"downregulation of protein insertion into mitochondrial outer membrane","type":"exact"},{"name":"downregulation of protein transport into mitochondrial outer membrane","type":"exact"},{"name":"inhibition of mitochondrial outer membrane protein import","type":"narrow"},{"name":"inhibition of protein import into mitochondrial outer membrane","type":"narrow"},{"name":"inhibition of protein insertion into mitochondrial outer membrane","type":"narrow"},{"name":"inhibition of protein transport into mitochondrial outer membrane","type":"narrow"},{"name":"negative regulation of mitochondrial outer membrane protein import","type":"exact"},{"name":"negative regulation of protein import into mitochondrial outer membrane","type":"exact"},{"name":"negative regulation of protein transport into mitochondrial outer membrane","type":"exact"}],"termid":"GO:1903637"}


id: FYPO:0003763
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell is inviable and contains one nucleus and no septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aseptate mononucleate vegetative cell","termid":"FYPO:0003785"},{"relation_name":"is_a","term_name":"inviable aseptate vegetative cell","termid":"FYPO:0003931"},{"relation_name":"is_a","term_name":"inviable mononucleate vegetative cell","termid":"FYPO:0006430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0000032","FYPO:0005447","FYPO:0000004"],"is_obsolete":false,"name":"inviable aseptate mononucleate vegetative cell","synonyms":[{"name":"inviable aseptate mononucleate cell during vegetative growth","type":"exact"},{"name":"inviable aseptate mononucleate vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable mononucleate aseptate vegetative cell","type":"exact"},{"name":"inviable unseptated mononucleate vegetative cell","type":"exact"},{"name":"lethal; aseptate mononucleate vegetative cell","type":"exact"}],"termid":"FYPO:0003763"}


id: PBO:0038323
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malacards_displayed_disease_name","termid":"PBO:0038323"}


id: PBO:0069273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 529, pseudogene","termid":"PBO:0069273"}


id: FYPO:0005467
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the actomyosin contractile ring is decreased during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to actomyosin contractile ring","termid":"FYPO:0002699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000032","FYPO:0001985","FYPO:0000631","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to actomyosin contractile ring during mitosis","synonyms":[{"name":"decreased protein localisation to actomyosin contractile ring during mitosis","type":"exact"},{"name":"decreased protein localization to actomyosin contractile ring during mitosis during vegetative growth","type":"exact"},{"name":"decreased protein localization to actomyosin contractile ring during mitotic nuclear division","type":"exact"},{"name":"decreased protein localization to actomyosin contractile ring involved in mitotic cytokinesis during mitosis","type":"exact"},{"name":"decreased protein localization to cytokinetic contractile ring during mitosis","type":"exact"},{"name":"decreased protein localization to mitotic contractile ring during mitosis","type":"exact"},{"name":"decreased protein recruitment to actomyosin contractile ring during mitosis","type":"related"},{"name":"reduced protein localization to actomyosin contractile ring during mitosis","type":"exact"}],"termid":"FYPO:0005467"}


id: PR:O74551
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC777.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C777.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.12c","synonyms":[{"name":"Spom972h-SPCC777.12c","type":"exact"}],"termid":"PR:O74551"}


id: GO:1903192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sesquarterpene.","definition_xrefs":["GOC:mengo_curators","PMID:21627333","GO_REF:0000068","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene metabolic process","termid":"GO:0042214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sesquarterpene metabolic process","synonyms":[{"name":"sesquarterpene metabolism","type":"exact"}],"termid":"GO:1903192"}


id: GO:1902215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-4-mediated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:17210636"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of interleukin-4-mediated signaling pathway","termid":"GO:1902214"},{"relation_name":"negatively_regulates","term_name":"interleukin-4-mediated signaling pathway","termid":"GO:0035771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-4-mediated signaling pathway","synonyms":[{"name":"down regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"down regulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"down regulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"down-regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"down-regulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"down-regulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"downregulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"downregulation of interleukin-4-mediated signaling pathway","type":"exact"},{"name":"downregulation of interleukin-4-mediated signalling pathway","type":"exact"},{"name":"inhibition of IL-4-mediated signaling pathway","type":"narrow"},{"name":"inhibition of interleukin-4-mediated signaling pathway","type":"narrow"},{"name":"inhibition of interleukin-4-mediated signalling pathway","type":"narrow"},{"name":"negative regulation of IL-4-mediated signaling pathway","type":"exact"},{"name":"negative regulation of interleukin-4-mediated signalling pathway","type":"exact"}],"termid":"GO:1902215"}


id: PBO:0039129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"absent in melanoma 2","termid":"PBO:0039129"}


id: GO:0150173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidylcholine metabolic process.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:30074985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylcholine metabolic process","termid":"GO:0150172"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid metabolic process","termid":"GO:1903727"},{"relation_name":"positively_regulates","term_name":"phosphatidylcholine metabolic process","termid":"GO:0046470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphatidylcholine metabolic process","termid":"GO:0150173"}


id: GO:0019502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving stachydrine, N-methylproline methylbetaine, the betaine derivative of L-proline found in alfalfa, chrysanthemum, and citrus plants.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine metabolic process","termid":"GO:0006577"},{"relation_name":"is_a","term_name":"alkaloid metabolic process","termid":"GO:0009820"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-proline betaine metabolic process","synonyms":[{"name":"stachydrine metabolic process","type":"exact"},{"name":"stachydrine metabolism","type":"exact"}],"termid":"GO:0019502"}


id: GO:0046193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring, in the absence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"anaerobic phenol-containing compound metabolic process","termid":"GO:0042215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic phenol-containing compound catabolic process","synonyms":[{"name":"anaerobic phenol-containing compound breakdown","type":"exact"},{"name":"anaerobic phenol-containing compound catabolism","type":"exact"},{"name":"anaerobic phenol-containing compound degradation","type":"exact"}],"termid":"GO:0046193"}


id: PBO:0091969
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously annotated as SPNCRNA.503","termid":"PBO:0091969"}


id: PBO:0088724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly protein, LYR family Isd11","termid":"PBO:0088724"}


id: PBO:0064128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase inhibitor alpha","termid":"PBO:0064128"}


id: PBO:0086055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function, secreted when constitutively expressed; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the cell periphery, SWAT-GFP fusion also localizes to the extracellular region, and mCherry fusion also localizes to the vacuole; S/T rich and highly similar to YOL155C, a putative glucan alpha-1,4-glucosidase; transcript is induced in both high and low pH environments; non-essential gene","termid":"PBO:0086055"}


id: GO:0160064
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that mediates the insertion of multi-pass transmembrane proteins into endoplasmic reticulum (ER) membrane. Substrates enter via the lateral gate of the Sec61 translocon. The complex comprises the GEL subcomplex (composed of RAB5IF/OPTI and TMCO1), the BOS subcomplex (composed of NCLN/Nicalin, NOMO and TMEM147) and the PAT subcomplex (composed of WDR83OS/Asterix and CCDC47).","definition_xrefs":["PMID:36261522","PMID:36261528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER membrane insertion complex","termid":"GO:0072379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005829","GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"multi-pass translocon complex","synonyms":[{"name":"MPT complex","type":"exact"},{"name":"TMCO1 translocon","type":"related"}],"termid":"GO:0160064"}


id: PBO:0086948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Recognition component (N-recognin) of the Pro/N-degron pathway; recognizes and targets for degradation proteins with N-terminal degradation signals; expressed only under starvation or osmotic stress","termid":"PBO:0086948"}


id: GO:0042663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the specification of a cell into an endoderm cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"is_a","term_name":"regulation of endodermal cell differentiation","termid":"GO:1903224"},{"relation_name":"regulates","term_name":"endodermal cell fate specification","termid":"GO:0001714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endodermal cell fate specification","synonyms":[{"name":"regulation of endoderm cell fate specification","type":"exact"}],"termid":"GO:0042663"}


id: PBO:0047502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FER tyrosine kinase","termid":"PBO:0047502"}


id: PBO:0044509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytohesin 1 interacting protein","termid":"PBO:0044509"}


id: PBO:0063806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylase kinase regulatory subunit beta pseudogene 1","termid":"PBO:0063806"}


id: PBO:0031899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane signaling receptor Wsc1 (predicted)","termid":"PBO:0031899"}


id: PBO:0045066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discs large MAGUK scaffold protein 5","termid":"PBO:0045066"}


id: PBO:0030098
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_glutathione_level_during_vegetative_growth","termid":"PBO:0030098"}


id: RO:0002433
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p contributes to morphology of w if and only if a change in the morphology of p entails a change in the morphology of w. Examples: every skull contributes to morphology of the head which it is a part of. Counter-example: nuclei do not generally contribute to the morphology of the cell they are part of, as they are buffered by cytoplasm.","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contributes_to_morphology_of","termid":"RO:0002433"}


id: SO:0001773
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where the mutated gene product does not allow for one or more basic functions necessary for survival.","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_abnormal","termid":"SO:0002218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal_variant","synonyms":[{"name":"lethal variant","type":"exact"}],"termid":"SO:0001773"}


id: FYPO:0001424
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"},{"relation_name":"is_a","term_name":"abolished protein localization to nucleus","termid":"FYPO:0003450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to nucleus during vegetative growth","synonyms":[{"name":"abolished protein localisation to nucleus during vegetative growth","type":"exact"},{"name":"abolished protein localization to nucleus during mitotic cell cycle","type":"related"},{"name":"nuclear exclusion during vegetative growth","type":"related"},{"name":"nuclear protein exclusion during vegetative growth","type":"related"},{"name":"protein localization to nucleus abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001424"}


id: PBO:0015697
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae SKN7","termid":"PBO:0015697"}


id: PR:O94355
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rxt2 gene.","definition_xrefs":["UniProtKB:O94355","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulatory protein rxt2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.06c","synonyms":[{"name":"Spom972h-rxt2","type":"exact"}],"termid":"PR:O94355"}


id: GO:0006706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"},{"relation_name":"is_a","term_name":"lipid catabolic process","termid":"GO:0016042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"steroid catabolic process","synonyms":[{"name":"steroid breakdown","type":"exact"},{"name":"steroid catabolism","type":"exact"},{"name":"steroid degradation","type":"exact"}],"termid":"GO:0006706"}


id: PBO:0063876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class F pseudogene 2","termid":"PBO:0063876"}


id: PBO:0054647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2052","termid":"PBO:0054647"}


id: GO:0002081
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The acrosomal membrane region that underlies the plasma membrane of the sperm. This membrane fuses with the sperm plasma membrane as part of the acrosome reaction.","definition_xrefs":["GOC:dph","PMID:8936405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle membrane","termid":"GO:0030659"},{"relation_name":"part_of","term_name":"acrosomal membrane","termid":"GO:0002080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"outer acrosomal membrane","termid":"GO:0002081"}


id: PBO:0071773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 1","termid":"PBO:0071773"}


id: PBO:0047613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarate hydratase pseudogene 2","termid":"PBO:0047613"}


id: GO:1900434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to starvation.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"is_a","term_name":"regulation of response to stress","termid":"GO:0080134"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900428"},{"relation_name":"regulates","term_name":"filamentous growth of a population of unicellular organisms in response to starvation","termid":"GO:0036170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of filamentous growth of a population of unicellular organisms in response to starvation","termid":"GO:1900434"}


id: PR:O94552
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fumarate hydratase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11444:SF1","OMA:SCHPO04899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarate hydratase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.18c","secondary_identifiers":["UniProtKB:O94552"],"synonyms":[{"name":"Fumarase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FH","type":"exact"}],"termid":"PR:O94552"}


id: PBO:0041243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 116","termid":"PBO:0041243"}


id: GO:0097754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A membrane bending process mediated by clathrin.","definition_xrefs":["Wikipedia:Membrane_curvature","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane bending","termid":"GO:0097753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"clathrin-mediated membrane bending","termid":"GO:0097754"}


id: GO:0016083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Fusion of the synaptic vesicle with the postsynaptic membrane.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete synaptic vesicle fusion (obsolete GO:0016083)","synonyms":[{"name":"synaptic vesicle fusion","type":"exact"}],"termid":"GO:0016083"}


id: PBO:0086895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transporter; member of the sugar porter family","termid":"PBO:0086895"}


id: GO:0051055
data:
  {"annotated_genes":["SJAG_03130","SJAG_01906","SJAG_03940","SJAG_02380","SJAG_02104","SJAG_01187"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[107339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045717"},{"annotations":[111563,107450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[105799,108824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071072"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of lipid metabolic process","termid":"GO:0045833"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"negatively_regulates","term_name":"lipid biosynthetic process","termid":"GO:0008610"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_01906":null,"SJAG_02104":null,"SJAG_02380":null,"SJAG_03130":null,"SJAG_03940":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of lipid biosynthetic process","type":"exact"},{"name":"down-regulation of lipid biosynthetic process","type":"exact"},{"name":"downregulation of lipid biosynthetic process","type":"exact"},{"name":"inhibition of lipid biosynthetic process","type":"narrow"},{"name":"negative regulation of lipid anabolism","type":"exact"},{"name":"negative regulation of lipid biosynthesis","type":"exact"},{"name":"negative regulation of lipid formation","type":"exact"},{"name":"negative regulation of lipid synthesis","type":"exact"},{"name":"negative regulation of lipogenesis","type":"exact"}],"termid":"GO:0051055","terms_by_termid":{"GO:0010895":null,"GO:0045717":null,"GO:0071072":null,"GO:2001211":null}}


id: GO:0046289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving isoflavonoid phytoalexins, a group of water-soluble phenolic derivatives isomeric with flavonoids that possess antibiotic activity and are produced by plant tissues in response to infection.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoflavonoid metabolic process","termid":"GO:0046287"},{"relation_name":"is_a","term_name":"phytoalexin metabolic process","termid":"GO:0052314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"isoflavonoid phytoalexin metabolic process","synonyms":[{"name":"isoflavonoid phytoalexin metabolism","type":"exact"}],"termid":"GO:0046289"}


id: PBO:0028050
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spindle_pole_bodies_present_in_increased_numbers_during_meiosis","termid":"PBO:0028050"}


id: PBO:0004456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn2 (predicted)","termid":"PBO:0004456"}


id: PBO:0060513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ethylmaleimide-sensitive factor attachment protein, gamma pseudogene 1","termid":"PBO:0060513"}


id: PBO:0027073
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_DNA_replication_lagging_strand_elongation","termid":"PBO:0027073"}


id: FYPO:0002927
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which an interaction between a protein and a polyadenylated RNA (poly(A)RNA) is decreased. One of the relevant gene products may be encoded by the mutated gene, or both the RNA and protein may be encoded by genes other than the mutated one.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-RNA interaction","termid":"FYPO:0002134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002131"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0002131","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"decreased poly(A) RNA binding","synonyms":[{"name":"decreased polyA RNA binding","type":"exact"},{"name":"decreased polyadenylated RNA binding","type":"exact"},{"name":"decreased protein-poly(A) RNA interaction","type":"exact"},{"name":"reduced poly(A) RNA binding","type":"exact"}],"termid":"FYPO:0002927"}


id: PBO:0014589
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitosis Inhibitory Kinase","termid":"PBO:0014589"}


id: PBO:0113325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein localized to COPII vesicles; proposed to be involved in ER-to-Golgi transport; interacts with members of the Rab GTPase family and Yip1p; also interacts with Rtn1p; integral membrane protein that localizes to the ER, the Golgi apparatus, transport vesicles and the peroxisome; two isoforms exist, a full-length Yip3L (Yip3 Long) and a shorter peroxisomal matrix isoform Yip3S (Yip3 Short)","termid":"PBO:0113325"}


id: PBO:0057107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 197","termid":"PBO:0057107"}


id: FYPO:0006699
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of hercynylcysteine sulfoxide measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular hercynylcysteine sulfoxide level during vegetative growth","synonyms":[{"name":"decreased cellular hercynylcysteine sulfoxide level during mitotic cell cycle","type":"related"},{"name":"decreased cellular hercynylcysteine sulphoxide level during vegetative growth","type":"exact"},{"name":"decreased hercynylcysteine sulfoxide level during vegetative growth","type":"exact"},{"name":"reduced cellular hercynylcysteine sulfoxide level during vegetative growth","type":"exact"}],"termid":"FYPO:0006699"}


id: FYPO:0005720
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromosome recapture is normal (i.e. indistinguishable from wild type) during metaphase of mitosis. Chromosome recapture is the reattachment of chromosomes which have become detached from the spindle.","definition_xrefs":["PMID:17881496","PomBase:mah","GO:1990942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000138","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal mitotic metaphase chromosome recapture","synonyms":[{"name":"normal chromosome recapture during mitotic metaphase","type":"exact"},{"name":"normal kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"normal mitotic kinetochore retrieval","type":"exact"},{"name":"normal mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"normal mitotic metaphase chromosome retrieval to SPB","type":"exact"},{"name":"normal mitotic metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"normal mitotic sister kinetochore recapture","type":"exact"}],"termid":"FYPO:0005720"}


id: PBO:0045180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB1 peudogene 2","termid":"PBO:0045180"}


id: GO:0047159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-O-(1Z-alkenyl)-sn-glycero-3-phosphocholine + an acyl-CoA = 1-O-(1Z-alkenyl)-2-acyl-sn-glycero-3-phosphocholine + CoA.","definition_xrefs":["RHEA:10344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"plasmalogen synthase activity","secondary_identifiers":["MetaCyc:PLASMALOGEN-SYNTHASE-RXN","EC:2.3.1.25"],"synonyms":[{"name":"1-alkenylglycerophosphocholine O-acyltransferase activity","type":"related"},{"name":"acyl-CoA:1-alkenylglycerophosphocholine O-acyltransferase activity","type":"related"}],"termid":"GO:0047159"}


id: FYPO:0001053
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype in which a cell enters mitosis at the same size as wild type, and then septates to give rise to a cut phenotype. In a cut phenotype, a cell undergoes septation despite abnormal mitosis such that the septum physically divides the nucleus into two parts.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal vegetative cell size","termid":"FYPO:0001124"},{"relation_name":"has_part","term_name":"cut with abnormal chromosome segregation","termid":"FYPO:0003165"},{"relation_name":"is_a","term_name":"normal vegetative cell size","termid":"FYPO:0001124"},{"relation_name":"is_a","term_name":"cut with abnormal chromosome segregation","termid":"FYPO:0003165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000337","FYPO:0005447","FYPO:0001312","FYPO:0000641","FYPO:0001320","FYPO:0000002","FYPO:0000004","FYPO:0000631","FYPO:0000032","FYPO:0000257"],"is_obsolete":false,"name":"cut, normal size cell","synonyms":[{"name":"cut following normal onset of mitosis, normal size cell","type":"exact"},{"name":"cut with mitotic catastrophe, normal size cell","type":"related"},{"name":"cut, normal size cell during mitotic cell cycle","type":"related"},{"name":"cut, normal size cell during vegetative growth","type":"exact"},{"name":"septation following abnormal nuclear division, normal size cell","type":"exact"}],"termid":"FYPO:0001053"}


id: PBO:0002982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminotransferase class-III, unknown specificity","termid":"PBO:0002982"}


id: PBO:0067848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 150","termid":"PBO:0067848"}


id: PBO:0065774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaminyl-peptide cyclotransferase like","termid":"PBO:0065774"}


id: PBO:0056557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance complex component 5","termid":"PBO:0056557"}


id: PBO:0055878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 4","termid":"PBO:0055878"}


id: PBO:0075771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF2 pseudogene 1","termid":"PBO:0075771"}


id: GO:0051983
data:
  {"annotated_genes":["SJAG_04457","SJAG_02169","SJAG_01679","SJAG_04699","SJAG_05290","SJAG_04259","SJAG_04140","SJAG_01082","SJAG_01805","SJAG_01297","SJAG_02451","SJAG_01515","SJAG_04573","SJAG_03353","SJAG_04597","SJAG_02104","SJAG_03681","SJAG_01330","SJAG_04853","SJAG_00244","SJAG_00145","SJAG_04280","SJAG_03350","SJAG_04884","SJAG_03575","SJAG_03126","SJAG_00666","SJAG_04968","SJAG_05329","SJAG_00460","SJAG_02380","SJAG_04464","SJAG_03327","SJAG_00883","SJAG_02336","SJAG_00082","SJAG_02498","SJAG_04126","SJAG_03048","SJAG_02332","SJAG_04999","SJAG_01837","SJAG_01956"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86791,108037,110349,99975,104323,95655,109866,103301,111983],"is_not":false,"rel_names":["regulates","negatively_regulates","is_a","positively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[102379,110575],"is_not":false,"rel_names":["regulates","is_a","negatively_regulates"],"summary":null,"term":"GO:1905318"},{"annotations":[97868,102380,112762],"is_not":false,"rel_names":["regulates","negatively_regulates","is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[96205,94762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990949"},{"annotations":[98365,96206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990950"},{"annotations":[86416,109210,97908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007091"},{"annotations":[95501,102381,109870,112765,110578,105977,97869,111639,86793],"is_not":false,"rel_names":["is_a","negatively_regulates","regulates"],"summary":null,"term":"GO:0007094"},{"annotations":[98438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902424"},{"annotations":[94763],"is_not":false,"rel_names":["is_a","negatively_regulates","regulates"],"summary":null,"term":"GO:1902103"},{"annotations":[111640,102382],"is_not":false,"rel_names":["regulates","negatively_regulates","is_a"],"summary":null,"term":"GO:0045841"},{"annotations":[99355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000816"},{"annotations":[90270],"is_not":false,"rel_names":["is_a","positively_regulates","negatively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[98446],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902845"},{"annotations":[112093,101240,108038],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902425"},{"annotations":[109871],"is_not":false,"rel_names":["regulates","positively_regulates","is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[91231],"is_not":false,"rel_names":["is_a","regulates","positively_regulates"],"summary":null,"term":"GO:1905191"},{"annotations":[112769],"is_not":false,"rel_names":["positively_regulates","is_a","regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[98184,96207,110849,98457,93766,107453,110350,89872],"is_not":false,"rel_names":["positively_regulates","is_a","regulates"],"summary":null,"term":"GO:0045842"},{"annotations":[112771],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905824"},{"annotations":[107279,98458,112772,89873,86074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[93767,95677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901970"},{"annotations":[86075,90482],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:1902846"},{"annotations":[107513],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110161"},{"annotations":[106257,89953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090006"},{"annotations":[98468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062123"},{"annotations":[97405],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:1905325"},{"annotations":[90271],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:0090266"},{"annotations":[112774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033047"},{"annotations":[107091],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032888"},{"annotations":[111132],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110162"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chromosome segregation, the process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"regulates","term_name":"chromosome segregation","termid":"GO:0007059"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00145":null,"SJAG_00244":null,"SJAG_00460":null,"SJAG_00666":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01956":null,"SJAG_02104":null,"SJAG_02169":null,"SJAG_02332":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03350":null,"SJAG_03353":null,"SJAG_03575":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04280":null,"SJAG_04457":null,"SJAG_04464":null,"SJAG_04573":null,"SJAG_04597":null,"SJAG_04699":null,"SJAG_04853":null,"SJAG_04884":null,"SJAG_04968":null,"SJAG_04999":null,"SJAG_05290":null,"SJAG_05329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of chromosome segregation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051983","terms_by_termid":{"GO:0007091":null,"GO:0007094":null,"GO:0032888":null,"GO:0033047":null,"GO:0033316":null,"GO:0045841":null,"GO:0045842":null,"GO:0062123":null,"GO:0090006":null,"GO:0090266":null,"GO:0090267":null,"GO:0110161":null,"GO:0110162":null,"GO:0140429":null,"GO:0140499":null,"GO:1901970":null,"GO:1902103":null,"GO:1902424":null,"GO:1902425":null,"GO:1902426":null,"GO:1902845":null,"GO:1902846":null,"GO:1905191":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1905824":null,"GO:1990949":null,"GO:1990950":null,"GO:2000816":null}}


id: PBO:0057224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 380","termid":"PBO:0057224"}


id: PBO:0040996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 3 pseudogene 1","termid":"PBO:0040996"}


id: GO:0035678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form (cell shape and size) that occurs when a neuromast hair cell progresses from its initial formation to its mature state. A neuromast hair cell is a hair cell that acts as a sensory receptor of the neuromast; it is morphologically polarized as a result of the relative position of the single kinocilium and the clusters of stereocilia on its apical surface.","definition_xrefs":["CL:0000856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis involved in neuron differentiation","termid":"GO:0048667"},{"relation_name":"part_of","term_name":"neuromast hair cell development","termid":"GO:0035675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast hair cell morphogenesis","termid":"GO:0035678"}


id: PBO:0086768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; similar to the mouse IMPACT gene; YDL177C is not an essential gene","termid":"PBO:0086768"}


id: GO:0009660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an amyloplast. An amyloplast is a plastid whose main function is to synthesize and store starch.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid organization","termid":"GO:0009657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amyloplast organization","synonyms":[{"name":"amyloplast organisation","type":"exact"},{"name":"amyloplast organization and biogenesis","type":"related"}],"termid":"GO:0009660"}


id: FYPO:0006631
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to chromatin is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin","termid":"FYPO:0001679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to chromatin","synonyms":[{"name":"decreased protein localisation to chromatin","type":"exact"},{"name":"reduced protein localization to chromatin","type":"exact"}],"termid":"FYPO:0006631"}


id: PBO:0076498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 1 receptor member 1","termid":"PBO:0076498"}


id: PBO:0077527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 241","termid":"PBO:0077527"}


id: PBO:0084059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein (GAP) for Rho3p, involved in cell polarity green fluorescent protein (GFP)-fusion protein localizes to the cell periphery and cytoplasm; relocalizes from bud neck to cytoplasm upon DNA replication stress","termid":"PBO:0084059"}


id: FYPO:0007015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the 3' ends of tRNA genes is increased.","definition_xrefs":["PMID:31294478","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin at tRNA genes","termid":"FYPO:0004033"},{"relation_name":"is_a","term_name":"increased protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes","termid":"FYPO:0007734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to chromatin at 3' end of tRNA genes","synonyms":[{"name":"increased protein localisation to chromatin at 3' end of tRNA genes","type":"exact"},{"name":"increased protein localization to chromatin at 3' end of tRNA genes during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at 3' end of tRNA genes during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin at 3' end of transfer RNA genes","type":"exact"},{"name":"increased protein localization to chromatin at tRNA genes at 3' end","type":"exact"}],"termid":"FYPO:0007015"}


id: FYPO:0006010
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mating projection is assembled but does not meet a cell of the opposite mating type.","definition_xrefs":["PMID:28410370","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished shmoo contact with partner cell","synonyms":[{"name":"abolished shmoo contact with partner cell during conjugation","type":"exact"},{"name":"shmoo does not meet partner cell","type":"exact"},{"name":"shmoo without partner cell","type":"broad"}],"termid":"FYPO:0006010"}


id: PBO:0059443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A14","termid":"PBO:0059443"}


id: PBO:0056678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocyte enhancer factor 2C","termid":"PBO:0056678"}


id: PBO:0084835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein that may have a role in phospholipid metabolism; inner membrane protein with similarity to Mdm32p; required for normal mitochondrial morphology and inheritance; interacts genetically with MMM1, MMM2, MDM10, MDM12, and MDM34","termid":"PBO:0084835"}


id: PBO:0060609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap binding protein subunit 2 like","termid":"PBO:0060609"}


id: PBO:0063441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 6C","termid":"PBO:0063441"}


id: PBO:0028493
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-nucleus_mislocalized_towards_cell_tip_during_mitotic_interphase","termid":"PBO:0028493"}


id: PATO:0002215
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having the shape of a scythe or sickle.","definition_xrefs":["merriam-webster:http://www.merriam-webster.com/dictionary/falciform"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"falciform","synonyms":[{"name":"falcate","type":"exact"},{"name":"hooked","type":"exact"},{"name":"scythe-shaped","type":"exact"},{"name":"sickle-shaped","type":"exact"},{"name":"unciform","type":"exact"},{"name":"uncinate","type":"exact"}],"termid":"PATO:0002215"}


id: PBO:0064981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME N-terminal like, pseudogene","termid":"PBO:0064981"}


id: PBO:0030971
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_dimethylation_at_centromere","termid":"PBO:0030971"}


id: PBO:0064196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A and acyltransferase 4","termid":"PBO:0064196"}


id: GO:0060125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases or stops the frequency, rate or extent of the regulated release of growth hormone from a cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth hormone secretion","termid":"GO:0060123"},{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"negatively_regulates","term_name":"growth hormone secretion","termid":"GO:0030252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of growth hormone secretion","termid":"GO:0060125"}


id: PBO:0043076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic alpha 5 subunit","termid":"PBO:0043076"}


id: PBO:0049115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 179","termid":"PBO:0049115"}


id: GO:0002104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage between the 5S rRNA and the 4.5S rRNA of an rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, Large Subunit (LSU) the 4.5S rRNA, and the 5S rRNA in that order from 5' to 3' along the primary transcript. Note that the use of the word tetracistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)","termid":"GO:0002103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0042254","GO:0044085"],"is_obsolete":false,"name":"endonucleolytic cleaveage between 4.5S rRNA and 5S rRNA of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)","termid":"GO:0002104"}


id: GO:0061199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which force is generated within striated embryonic muscle tissue, resulting in a contraction of the muscle that contributes to the formation of an embryo's characteristic body morphology.","definition_xrefs":["GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle contraction","termid":"GO:0006941"},{"relation_name":"part_of","term_name":"embryonic body morphogenesis","termid":"GO:0010172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle contraction involved in embryonic body morphogenesis","termid":"GO:0061199"}


id: PBO:0043684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coactosin like F-actin binding protein 1","termid":"PBO:0043684"}


id: GO:0072367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of lipid transport by modulating the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:BHF","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of lipid transport by regulation of transcription from RNA polymerase II promoter (obsolete GO:0072367)","synonyms":[{"name":"regulation of lipid transport by regulation of transcription from an RNA polymerase II promoter","type":"exact"}],"termid":"GO:0072367"}


id: GO:0047321
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: microsomal-membrane protein + diphosphate = diphosphate + O-phospho-microsomal-membrane protein.","definition_xrefs":["EC:2.7.99.1","MetaCyc:2.7.99.1-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"diphosphate-protein phosphotransferase activity","synonyms":[{"name":"DiPPT","type":"related"},{"name":"diphosphate:microsomal-membrane-protein O-phosphotransferase activity","type":"broad"},{"name":"pyrophosphate-protein phosphotransferase activity","type":"related"},{"name":"pyrophosphate:protein phosphotransferase activity","type":"related"},{"name":"triphosphate-protein phosphotransferase activity","type":"related"},{"name":"triphosphate:microsomal-membrane-protein phosphotransferase activity","type":"related"}],"termid":"GO:0047321"}


id: PBO:0031855
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-haplosufficient","termid":"PBO:0031855"}


id: PBO:0049441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 18","termid":"PBO:0049441"}


id: PBO:0053353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 244","termid":"PBO:0053353"}


id: PBO:0017429
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_has_input","termid":"PBO:0017429"}


id: PBO:0090445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARP complex subunit Vps54","termid":"PBO:0090445"}


id: SO:0000814
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a region's ability, when introduced to a mutant organism, to re-establish (rescue) a phenotype.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rescue","termid":"SO:0000814"}


id: PATO:0000607
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000607 relative angle value (obsolete PATO:0000607)","termid":"PATO:0000607"}


id: GO:0047220
data:
  {"annotated_genes":["SJAG_00183"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101827],"is_not":false,"summary":null,"term":"GO:0047220"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-beta-D-galactosyl-O-beta-D-xylosylprotein + UDP-galactose = 3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosylprotein + UDP.","definition_xrefs":["EC:2.4.1.134","MetaCyc:2.4.1.134-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"galactosylxylosylprotein 3-beta-galactosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1889978","RHEA:11780","Reactome:R-HSA-4420365"],"synonyms":[{"name":"UDP-galactose:4-beta-D-galactosyl-O-beta-D-xylosylprotein 3-beta-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:4-beta-D-galactosyl-O-beta-D-xylosylprotein 3-beta-D-galactosyltransferase activity","type":"related"},{"name":"galactosyltransferase II activity","type":"related"},{"name":"uridine diphosphogalactose-galactosylxylose galactosyltransferase activity","type":"related"}],"termid":"GO:0047220","terms_by_termid":{"GO:0047220":null}}


id: GO:0051656
data:
  {"annotated_genes":["SJAG_04721","SJAG_01370","SJAG_03989","SJAG_04960","SJAG_03543","SJAG_02509","SJAG_04003","SJAG_05260","SJAG_04280","SJAG_00418","SJAG_05295","SJAG_02737","SJAG_02045","SJAG_02731","SJAG_04143","SJAG_02320","SJAG_05226","SJAG_01391","SJAG_03357","SJAG_05220","SJAG_00302","SJAG_01065","SJAG_03264","SJAG_03012","SJAG_02166","SJAG_00140","SJAG_00918","SJAG_04379","SJAG_04597","SJAG_03416","SJAG_01278","SJAG_03926","SJAG_02210","SJAG_01925","SJAG_04508","SJAG_05290","SJAG_03658","SJAG_01837","SJAG_04076","SJAG_03938","SJAG_05185","SJAG_02250","SJAG_01538","SJAG_00178","SJAG_00471","SJAG_01371","SJAG_04884","SJAG_04259","SJAG_01211","SJAG_04412","SJAG_03073","SJAG_02274","SJAG_01601","SJAG_03005","SJAG_02431","SJAG_00678","SJAG_02624","SJAG_00082","SJAG_00646","SJAG_07002","SJAG_03729","SJAG_04148","SJAG_03327","SJAG_02757","SJAG_02336","SJAG_03048","SJAG_01863","SJAG_02814","SJAG_00768","SJAG_04044","SJAG_00207","SJAG_03268","SJAG_03685","SJAG_01613","SJAG_01775","SJAG_04140","SJAG_02695","SJAG_03092","SJAG_03217","SJAG_03698","SJAG_03437","SJAG_03680","SJAG_05266","SJAG_04391","SJAG_04387","SJAG_01263","SJAG_03011","SJAG_00397","SJAG_02561","SJAG_01662","SJAG_03835","SJAG_03864","SJAG_00335","SJAG_00753","SJAG_03719","SJAG_04623","SJAG_03126","SJAG_03593","SJAG_04940","SJAG_02346","SJAG_00938","SJAG_01805","SJAG_05319","SJAG_00930","SJAG_03882","SJAG_03683","SJAG_01777","SJAG_03287","SJAG_03220","SJAG_04745","SJAG_01013","SJAG_02848","SJAG_00113","SJAG_01339","SJAG_04001","SJAG_01449","SJAG_02761","SJAG_04040","SJAG_03673","SJAG_01082","SJAG_01358","SJAG_02286","SJAG_03299","SJAG_05019","SJAG_01338","SJAG_00794","SJAG_04308","SJAG_00284","SJAG_01297","SJAG_02451","SJAG_03496","SJAG_00368","SJAG_05196","SJAG_03540","SJAG_01224","SJAG_00756"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112760],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051316"},{"annotations":[89897,83949],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051456"},{"annotations":[91378,91633,114751,107762,93975,87056,106427,83837,96450,101540,98512,112619,109865,86114,97401,106384,94689,114221,84082,105975,87446],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051315"},{"annotations":[113826,89287],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048205"},{"annotations":[91588],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048208"},{"annotations":[99042,91279,113034,99333,110033,87057,87899,107126,107480,83839,96797,97500,87447,93646,107301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030989"},{"annotations":[102648,86968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051654"},{"annotations":[98840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034643"},{"annotations":[113035,93051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000132"},{"annotations":[111620,86357,113150,94690,103891,97402,83894,109867,89861],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031619"},{"annotations":[97501,107303,102649],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[104324],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099607"},{"annotations":[85840,102011],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"},{"annotations":[98897,83474,101164,85841,95985],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032121"},{"annotations":[102012,112027,83475,92790,113643,113780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045141"},{"annotations":[102013,110071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044821"},{"annotations":[90838,105976],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0099606"},{"annotations":[90268,99978,104328,95296,94692],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1990942"},{"annotations":[105960,108696,109313,98086,98514,104952,110175,95195,96588,94693,113008,108697,85823,99625,87044,98087,99979,85216,94694,90269,112763,114783,108695,110577,85437,109869,98088,89899,104329,103573],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990758"},{"annotations":[98438],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902424"},{"annotations":[108847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007097"},{"annotations":[113038,108211,105681,97512,110035,103498,100094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098863"},{"annotations":[93720,95301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090561"},{"annotations":[95302,83843,93648,87449,91281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000743"},{"annotations":[108038,112093,101240],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902425"},{"annotations":[98458,112772,86074,89873,107279],"is_not":false,"rel_names":["part_of","regulates"],"summary":null,"term":"GO:0140429"},{"annotations":[90483],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902854"},{"annotations":[112775],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904967"},{"annotations":[112776],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140273"},{"annotations":[113761,101808,87145,114271,97947,95707,112317,85857,99076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000055"},{"annotations":[95886,87146,93149,99077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000056"},{"annotations":[102220,100026,91047,85083,87779,96484,93142,76399,107520,97463,106502,90060,101448,92197,98728,112253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000054"},{"annotations":[105214],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031134"},{"annotations":[85218,91383,105962,91634,103895,87046,106387,109314,96590,97406,105215,106428,89878,110177,112009,104954,94698,93976,113010,103575,85825,98515,101543],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051455"},{"annotations":[113039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140405"},{"annotations":[114524],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099022"},{"annotations":[86818,114928,113811,109954,110237,97992,95616,84702],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090522"},{"annotations":[112274,104210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030050"}]},"cv_name":"biological_process","definition":"The directed movement of an organelle to a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of localization","termid":"GO:0051234"},{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":136,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00113":null,"SJAG_00140":null,"SJAG_00178":null,"SJAG_00207":null,"SJAG_00284":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00418":null,"SJAG_00471":null,"SJAG_00646":null,"SJAG_00678":null,"SJAG_00753":null,"SJAG_00756":null,"SJAG_00768":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_00930":null,"SJAG_00938":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01082":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01263":null,"SJAG_01278":null,"SJAG_01297":null,"SJAG_01338":null,"SJAG_01339":null,"SJAG_01358":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01391":null,"SJAG_01449":null,"SJAG_01538":null,"SJAG_01601":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01775":null,"SJAG_01777":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01863":null,"SJAG_01925":null,"SJAG_02045":null,"SJAG_02166":null,"SJAG_02210":null,"SJAG_02250":null,"SJAG_02274":null,"SJAG_02286":null,"SJAG_02320":null,"SJAG_02336":null,"SJAG_02346":null,"SJAG_02431":null,"SJAG_02451":null,"SJAG_02509":null,"SJAG_02561":null,"SJAG_02624":null,"SJAG_02695":null,"SJAG_02731":null,"SJAG_02737":null,"SJAG_02757":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_02848":null,"SJAG_03005":null,"SJAG_03011":null,"SJAG_03012":null,"SJAG_03048":null,"SJAG_03073":null,"SJAG_03092":null,"SJAG_03126":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03264":null,"SJAG_03268":null,"SJAG_03287":null,"SJAG_03299":null,"SJAG_03327":null,"SJAG_03357":null,"SJAG_03416":null,"SJAG_03437":null,"SJAG_03496":null,"SJAG_03540":null,"SJAG_03543":null,"SJAG_03593":null,"SJAG_03658":null,"SJAG_03673":null,"SJAG_03680":null,"SJAG_03683":null,"SJAG_03685":null,"SJAG_03698":null,"SJAG_03719":null,"SJAG_03729":null,"SJAG_03835":null,"SJAG_03864":null,"SJAG_03882":null,"SJAG_03926":null,"SJAG_03938":null,"SJAG_03989":null,"SJAG_04001":null,"SJAG_04003":null,"SJAG_04040":null,"SJAG_04044":null,"SJAG_04076":null,"SJAG_04140":null,"SJAG_04143":null,"SJAG_04148":null,"SJAG_04259":null,"SJAG_04280":null,"SJAG_04308":null,"SJAG_04379":null,"SJAG_04387":null,"SJAG_04391":null,"SJAG_04412":null,"SJAG_04508":null,"SJAG_04597":null,"SJAG_04623":null,"SJAG_04721":null,"SJAG_04745":null,"SJAG_04884":null,"SJAG_04940":null,"SJAG_04960":null,"SJAG_05019":null,"SJAG_05185":null,"SJAG_05196":null,"SJAG_05220":null,"SJAG_05226":null,"SJAG_05260":null,"SJAG_05266":null,"SJAG_05290":null,"SJAG_05295":null,"SJAG_05319":null,"SJAG_07002":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of organelle localization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"establishment of organelle localisation","type":"exact"}],"termid":"GO:0051656","terms_by_termid":{"GO:0000054":null,"GO:0000055":null,"GO:0000056":null,"GO:0000132":null,"GO:0000743":null,"GO:0007097":null,"GO:0030050":null,"GO:0030989":null,"GO:0031134":null,"GO:0031619":null,"GO:0032118":null,"GO:0032121":null,"GO:0034643":null,"GO:0044821":null,"GO:0045141":null,"GO:0048205":null,"GO:0048208":null,"GO:0051315":null,"GO:0051316":null,"GO:0051455":null,"GO:0051456":null,"GO:0051654":null,"GO:0070197":null,"GO:0090522":null,"GO:0090561":null,"GO:0098863":null,"GO:0099022":null,"GO:0099606":null,"GO:0099607":null,"GO:0140273":null,"GO:0140405":null,"GO:0140429":null,"GO:1902424":null,"GO:1902425":null,"GO:1902854":null,"GO:1904967":null,"GO:1990758":null,"GO:1990942":null}}


id: PBO:0048328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 39","termid":"PBO:0048328"}


id: SO:0001279
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"1,2'-O-dimethylinosine is a modified inosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_inosine","termid":"SO:0001274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one_two_prime_O_dimethylinosine","secondary_identifiers":["RNAMOD:019"],"synonyms":[{"name":"1,2'-O-dimethylinosine","type":"exact"},{"name":"m'Im","type":"exact"},{"name":"one two prime O dimethylinosine","type":"exact"}],"termid":"SO:0001279"}


id: PATO:0000427
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's occurring or appearing again or repeatedly.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recurrent","termid":"PATO:0000427"}


id: GO:0015294
data:
  {"annotated_genes":["SJAG_03606","SJAG_04673","SJAG_03820","SJAG_02780","SJAG_03960","SJAG_04905","SJAG_03595","SJAG_04506","SJAG_01406","SJAG_04068","SJAG_03401","SJAG_02779","SJAG_03608","SJAG_00057","SJAG_04714","SJAG_02958"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99061,88548,74969,110251,106725,113297,110257,72163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005351"},{"annotations":[113301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"},{"annotations":[96749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034216"},{"annotations":[97731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015366"},{"annotations":[91844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005364"},{"annotations":[94117,88630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005366"},{"annotations":[101764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015379"},{"annotations":[88121,88115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015295"},{"annotations":[97734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097434"},{"annotations":[91845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008506"},{"annotations":[84526,91612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015505"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + cation(out) = solute(in) + cation(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transporter activity","termid":"GO:0008324"},{"relation_name":"is_a","term_name":"symporter activity","termid":"GO:0015293"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_01406":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_02958":null,"SJAG_03401":null,"SJAG_03595":null,"SJAG_03606":null,"SJAG_03608":null,"SJAG_03820":null,"SJAG_03960":null,"SJAG_04068":null,"SJAG_04506":null,"SJAG_04673":null,"SJAG_04714":null,"SJAG_04905":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"solute:monoatomic cation symporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"solute:cation symporter activity","type":"broad"}],"termid":"GO:0015294","terms_by_termid":{"GO:0005351":null,"GO:0005358":null,"GO:0005364":null,"GO:0005366":null,"GO:0008506":null,"GO:0015295":null,"GO:0015366":null,"GO:0015379":null,"GO:0015505":null,"GO:0034216":null,"GO:0097434":null}}


id: GO:0034758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of iron ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iron ion transport","termid":"GO:0034756"},{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transport","termid":"GO:0043270"},{"relation_name":"positively_regulates","term_name":"iron ion transport","termid":"GO:0006826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of iron ion transport","synonyms":[{"name":"activation of iron ion transport","type":"narrow"},{"name":"positive regulation of iron transport","type":"exact"},{"name":"stimulation of iron ion transport","type":"narrow"},{"name":"up regulation of iron ion transport","type":"exact"},{"name":"up-regulation of iron ion transport","type":"exact"},{"name":"upregulation of iron ion transport","type":"exact"}],"termid":"GO:0034758"}


id: PBO:0048845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosamine-phosphate N-acetyltransferase 1","termid":"PBO:0048845"}


id: PBO:0071760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1 pseudogene 7","termid":"PBO:0071760"}


id: MOD:00825
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-phenylalanine residue and an L-cysteine residue by a thioester bond to form S-(L-phenylalaninyl)-L-cysteine.","definition_xrefs":["RESID:AA0414","PubMed:12591958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(L-phenylalanyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2S)-2-amino-3-phenylpropanoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"CROSSLNK Phenylalanyl cysteine thioester (Cys-Phe)","type":"exact"},{"name":"S-(2-amino-3-phenylpropanoyl)cysteine","type":"exact"},{"name":"S-(L-phenylalanyl)-L-cysteine","type":"exact"},{"name":"XLNK1PheSCys","type":"exact"},{"name":"phenylalanine cysteine thioester","type":"exact"}],"termid":"MOD:00825"}


id: PBO:0017648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human TMEM165 homolog, implicated in calcium tranport","termid":"PBO:0017648"}


id: PATO:0001937
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being oblong, with the lower end very much attenuated.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oblong","termid":"PATO:0000946"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spatulate","synonyms":[{"name":"spathulate","type":"exact"}],"termid":"PATO:0001937"}


id: PBO:0018136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoprotein phosphatase involved in unfolded protein response (predicted)","termid":"PBO:0018136"}


id: PBO:0081782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 709","termid":"PBO:0081782"}


id: PBO:0057581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 885","termid":"PBO:0057581"}


id: PBO:0046381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGF domain specific O-linked N-acetylglucosamine transferase","termid":"PBO:0046381"}


id: GO:1904480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intestinal absorption.","definition_xrefs":["GOC:BHF","PMID:12469120","GOC:rl","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of digestive system process","termid":"GO:0060456"},{"relation_name":"is_a","term_name":"regulation of intestinal absorption","termid":"GO:1904478"},{"relation_name":"positively_regulates","term_name":"intestinal absorption","termid":"GO:0050892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of intestinal absorption","synonyms":[{"name":"activation of intestinal absorption","type":"narrow"},{"name":"up regulation of intestinal absorption","type":"exact"},{"name":"up-regulation of intestinal absorption","type":"exact"},{"name":"upregulation of intestinal absorption","type":"exact"}],"termid":"GO:1904480"}


id: FYPO:0007033
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of fluconazole than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002682","FYPO:0001985"],"is_obsolete":false,"name":"resistance to fluconazole","synonyms":[{"name":"resistance to fluconazole during mitotic cell cycle","type":"related"},{"name":"resistance to fluconazole during vegetative growth","type":"exact"},{"name":"resistant to fluconazole","type":"exact"}],"termid":"FYPO:0007033"}


id: PBO:0063256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 2","termid":"PBO:0063256"}


id: GO:0051418
data:
  {"annotated_genes":["SJAG_00856","SJAG_01756","SJAG_03540","SJAG_02737","SJAG_02886","SJAG_02761","SJAG_07018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030954"},{"annotations":[102508,96152,113037,96453,113279,97057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051415"},{"annotations":[114755,97058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051417"}]},"cv_name":"biological_process","definition":"The 'de novo' formation of a microtubule, mediated by the microtubule organizing center.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule nucleation","termid":"GO:0007020"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01756":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03540":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0065003","GO:0044085","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"microtubule nucleation by microtubule organizing center","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MTOC-mediated microtubule nucleation","type":"exact"},{"name":"microtubule nucleation by MTOC","type":"exact"},{"name":"microtubule nucleation by microtubule organising centre","type":"exact"},{"name":"microtubule organizing center-mediated microtubule nucleation","type":"exact"}],"termid":"GO:0051418","terms_by_termid":{"GO:0030954":null,"GO:0051415":null,"GO:0051417":null}}


id: PBO:0027106
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_termination_of_RNA_polymerase_II_transcription","termid":"PBO:0027106"}


id: PBO:0056574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPK regulated corepressor interacting protein 2 pseudogene 1","termid":"PBO:0056574"}


id: PBO:0082083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-oxoprolinase; enzyme is ATP-dependent and functions as a dimer; similar to mouse Oplah gene; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; protein abundance increases in response to DNA replication stress","termid":"PBO:0082083"}


id: PBO:0076541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription activation suppressor","termid":"PBO:0076541"}


id: PBO:0000764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine N-acyltransferase Lag1","termid":"PBO:0000764"}


id: PBO:0081160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger RNA binding protein","termid":"PBO:0081160"}


id: GO:0061493
data:
  {"annotated_genes":["SJAG_04901","SJAG_02795","SJAG_02246"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92933,94346,95916],"is_not":false,"summary":null,"term":"GO:0061493"}]},"cv_name":"cellular_component","definition":"One of three laminate structures that form the mitotic spindle pole body; the inner plaque is on the nuclear face of the spindle pole body.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central plaque of spindle pole body","termid":"GO:0005823"},{"relation_name":"part_of","term_name":"mitotic spindle pole body","termid":"GO:0044732"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02246":null,"SJAG_02795":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005816","GO:0015630","GO:0005575"],"is_obsolete":false,"name":"central plaque of mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061493","terms_by_termid":{"GO:0061493":null}}


id: PBO:0047737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FNDC1 intronic transcript 1","termid":"PBO:0047737"}


id: PBO:0089062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1/TPR repeat protein1, 3-beta-glucan synthase regulatory factor Chf3/Chr4","termid":"PBO:0089062"}


id: PBO:0057031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 126","termid":"PBO:0057031"}


id: GO:0018521
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,6-dihydroxy-2-methylcyclohexa-2,4-dienecarboxylate + NAD+ = 3-methylcatechol + CO2 + NADH.","definition_xrefs":["RHEA:15657","EC:1.3.1.68"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"1,2-dihydroxy-6-methylcyclohexa-3,5-dienecarboxylate dehydrogenase activity","secondary_identifiers":["MetaCyc:1.3.1.68-RXN","UM-BBD_reactionID:r0224","KEGG_REACTION:R05314"],"synonyms":[{"name":"1,2-dihydroxy-6-methylcyclohexa-3,5-dienecarboxylate:NAD+ oxidoreductase (decarboxylating)","type":"related"}],"termid":"GO:0018521"}


id: PBO:0072183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S16 pseudogene 10","termid":"PBO:0072183"}


id: PBO:0055028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2443","termid":"PBO:0055028"}


id: PBO:0058744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6868","termid":"PBO:0058744"}


id: PR:P78929
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A destrin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G4.06c","secondary_identifiers":["UniProtKB:P78929"],"synonyms":[{"name":"Spom972h-DSTN","type":"exact"},{"name":"actin-depolymerizing factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78929"}


id: PBO:0086687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by sequence comparison with hemiascomycetous yeast species","termid":"PBO:0086687"}


id: GO:0010890
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of sequestering of triglyceride. Triglyceride sequestration is the process of binding or confining any triester of glycerol such that it is separated from other components of a biological system.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid storage","termid":"GO:0010884"},{"relation_name":"is_a","term_name":"regulation of sequestering of triglyceride","termid":"GO:0010889"},{"relation_name":"positively_regulates","term_name":"sequestering of triglyceride","termid":"GO:0030730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sequestering of triglyceride","synonyms":[{"name":"positive regulation of sequestering of triacylglycerol","type":"exact"},{"name":"positive regulation of triglyceride sequestration","type":"exact"}],"termid":"GO:0010890"}


id: PBO:0057984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3910-2","termid":"PBO:0057984"}


id: PBO:0112985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetylated cis-Golgi protein, homolog of human GRASP65; forms a complex with the coiled-coil protein Bug1p; required for unconventional protein secretion (UPS) of Acb1p in response to starvation; forms amyloid fibrils under heat shock; protein abundance increases in response to DNA replication stress","termid":"PBO:0112985"}


id: GO:1900150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of defense response to fungus.","definition_xrefs":["PMID:22242006","GOC:TermGenie","GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"defense response to fungus","termid":"GO:0050832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of defense response to fungus","secondary_identifiers":["GO:2000072"],"synonyms":[{"name":"regulation of defence response to fungi","type":"exact"},{"name":"regulation of defence response to fungus","type":"exact"},{"name":"regulation of defense response to fungi","type":"exact"},{"name":"regulation of defense response to fungi, incompatible interaction","type":"narrow"},{"name":"regulation of defense response to fungus, incompatible interaction","type":"narrow"},{"name":"regulation of resistance response to pathogenic fungi","type":"narrow"},{"name":"regulation of resistance response to pathogenic fungus","type":"narrow"},{"name":"regulation of response to pathogenic fungus (incompatible interaction)","type":"narrow"}],"termid":"GO:1900150"}


id: PBO:0068283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H2 subunit A","termid":"PBO:0068283"}


id: GO:0033624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of integrin activation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of integrin activation","termid":"GO:0033623"},{"relation_name":"negatively_regulates","term_name":"integrin activation","termid":"GO:0033622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of integrin activation","synonyms":[{"name":"negative regulation of integrin complex activation","type":"exact"}],"termid":"GO:0033624"}


id: GO:0036054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein-malonyllysine + H2O => protein-lysine + malonate. This reaction is the removal of a malonyl group (CO-CH2-CO) from a malonylated lysine residue of a protein or peptide.","definition_xrefs":["GOC:sp","PMID:21908771","PMID:22076378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016810","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"protein-malonyllysine demalonylase activity","synonyms":[{"name":"peptidyl-malonyllysine demalonylase activity","type":"exact"},{"name":"protein lysine demalonylation activity","type":"exact"},{"name":"protein malonyl lysine demalonylation activity","type":"exact"}],"termid":"GO:0036054"}


id: PBO:0036300
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital sideroblastic anemia","termid":"PBO:0036300"}


id: PBO:0028984
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_alpha,alpha-trehalase_activity_during_cellular_response_to_nutrient","termid":"PBO:0028984"}


id: GO:0003892
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A nuclear protein that associates as a trimer and then interacts with delta DNA polymerase and epsilon DNA polymerase, acting as an auxiliary factor for DNA replication and DNA repair.","definition_xrefs":["ISBN:0123668387"],"gene_count":0,"genotype_count":0,"name":"obsolete proliferating cell nuclear antigen (obsolete GO:0003892)","synonyms":[{"name":"PCNA","type":"exact"},{"name":"proliferating cell nuclear antigen","type":"exact"}],"termid":"GO:0003892"}


id: GO:1904074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of trophectodermal cell proliferation.","definition_xrefs":["GO_REF:0000058","PMID:24508636","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of trophectodermal cell proliferation","termid":"GO:1904073"},{"relation_name":"negatively_regulates","term_name":"trophectodermal cell proliferation","termid":"GO:0001834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of trophectodermal cell proliferation","synonyms":[{"name":"down regulation of trophectoderm cell proliferation","type":"exact"},{"name":"down regulation of trophectodermal cell proliferation","type":"exact"},{"name":"down-regulation of trophectoderm cell proliferation","type":"exact"},{"name":"down-regulation of trophectodermal cell proliferation","type":"exact"},{"name":"downregulation of trophectoderm cell proliferation","type":"exact"},{"name":"downregulation of trophectodermal cell proliferation","type":"exact"},{"name":"inhibition of trophectoderm cell proliferation","type":"narrow"},{"name":"inhibition of trophectodermal cell proliferation","type":"narrow"},{"name":"negative regulation of trophectoderm cell proliferation","type":"exact"}],"termid":"GO:1904074"}


id: PBO:0014302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERMES complex GTPase sububit Gem1 (predicted)","termid":"PBO:0014302"}


id: PBO:0062627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily H member 4","termid":"PBO:0062627"}


id: GO:1990332
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type-I transmembrane protein complex located in the endoplasmic reticulum (ER) consisting of an IRE1-IRE1 dimer, which forms in response to the accumulation of unfolded protein in the ER. The dimeric complex has endoribonuclease (RNase) activity and evokes the unfolded protein response (UPR) by cleaving an intron of a mRNA coding for the transcription factor HAC1 in yeast or XBP1 in mammals; the complex cleaves a single phosphodiester bond in each of two RNA hairpins (with non-specific base paired stems and loops of consensus sequence CNCNNGN, where N is any base) to remove an intervening intron from the target transcript.","definition_xrefs":["GOC:bf","GOC:bhm","PMID:25437541","PMID:18191223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"},{"relation_name":"is_a","term_name":"endoribonuclease complex","termid":"GO:1902555"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005789","GO:0005783","GO:0005575"],"is_obsolete":false,"name":"Ire1 complex","synonyms":[{"name":"ER-bound kinase/endoribonuclease (RNase), inositol-requiring enzyme-1","type":"exact"},{"name":"ERN1 complex","type":"related"},{"name":"IRE1 dimer","type":"exact"},{"name":"Ire1 complex dimer","type":"exact"},{"name":"Ire1 complex homodimer","type":"exact"},{"name":"Ire1 complex homooligomer","type":"exact"}],"termid":"GO:1990332"}


