# terms

id: GO:0060202
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of the clathrin-sculpted acetylcholine transport vesicle.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"clathrin-sculpted acetylcholine transport vesicle","termid":"GO:0060200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"clathrin-sculpted acetylcholine transport vesicle lumen","synonyms":[{"name":"clathrin sculpted acetylcholine constitutive secretory pathway transport vesicle lumen","type":"exact"},{"name":"clathrin sculpted acetylcholine transport vesicle lumen","type":"exact"}],"termid":"GO:0060202"}


id: PATO:0000287
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000287 absolute litter size (obsolete PATO:0000287)","termid":"PATO:0000287"}


id: PBO:0044222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTXN2 antisense RNA 1","termid":"PBO:0044222"}


id: FYPO:0006522
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after arrest at the mitotic G2/M phase transition of the mitotic cell cycle.","definition_xrefs":["PMID:11598020","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"loss of viability following cell cycle arrest at mitotic G2/M phase transition","synonyms":[{"name":"decreased viability following cell cycle arrest in mitotic G2 phase","type":"exact"},{"name":"loss of cell population viability following cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"loss of viability following mitotic G2/M arrest","type":"exact"},{"name":"loss of viability of mitotic G2-arrested cells","type":"related"},{"name":"reduced viability following cell cycle arrest at mitotic G2/M phase transition","type":"related"}],"termid":"FYPO:0006522"}


id: PBO:0111339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophismin-like histone chaperone/CENP-A amino terminus domain (NTD) isomerase Ani2/Fkbp40","termid":"PBO:0111339"}


id: PBO:0054142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1508","termid":"PBO:0054142"}


id: PBO:0003844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Blt1","termid":"PBO:0003844"}


id: SO:0000991
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA located in the genome and able to be transmitted to the offspring.","definition_xrefs":["BCS:etrwz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA","termid":"SO:0000352"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genomic_DNA","synonyms":[{"name":"gDNA","type":"exact"},{"name":"genomic DNA","type":"exact"}],"termid":"SO:0000991"}


id: GO:0046111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of xanthine, 2,6-dihydroxypurine, a purine formed in the metabolic breakdown of guanine but not present in nucleic acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase biosynthetic process","termid":"GO:0009113"},{"relation_name":"is_a","term_name":"xanthine metabolic process","termid":"GO:0046110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"xanthine biosynthetic process","synonyms":[{"name":"xanthine anabolism","type":"exact"},{"name":"xanthine biosynthesis","type":"exact"},{"name":"xanthine formation","type":"exact"},{"name":"xanthine synthesis","type":"exact"}],"termid":"GO:0046111"}


id: PBO:0089941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S15","termid":"PBO:0089941"}


id: PBO:0000149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA (predicted), possible alternative UTR","termid":"PBO:0000149"}


id: GO:0033678
data:
  {"annotated_genes":["SJAG_02242","SJAG_03780"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95952,108603],"is_not":false,"summary":null,"term":"GO:0033678"}]},"cv_name":"molecular_function","definition":"Unwinding of a DNA/RNA duplex in the 5' to 3' direction, driven by ATP hydrolysis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA/RNA helicase activity","termid":"GO:0033677"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02242":null,"SJAG_03780":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140098","GO:0003674","GO:0140097","GO:0003824"],"is_obsolete":false,"name":"5'-3' DNA/RNA helicase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-163120","GO:0033682"],"synonyms":[{"name":"5' to 3' DNA/RNA helicase activity","type":"exact"},{"name":"ATP-dependent 5' to 3' DNA/RNA helicase activity","type":"exact"},{"name":"ATP-dependent 5'-3' DNA/RNA helicase activity","type":"exact"}],"termid":"GO:0033678","terms_by_termid":{"GO:0033678":null}}


id: PBO:0064548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 10, pseudogene","termid":"PBO:0064548"}


id: PBO:0087530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of NuA4 histone H4 acetyltransferase and SWR1 complexes; may function to antagonize silencing near telomeres; interacts directly with Swc4p; has homology to human leukemogenic protein AF9; contains a YEATS domain","termid":"PBO:0087530"}


id: MOD:01601
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ8plex-121 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ8plex-121 reporter+balance reagent acylated residue","termid":"MOD:01577"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter fragment","termid":"MOD:01593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-121 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01601"}


id: PBO:0088088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose:dolichyl-phosphate glucosyltransferase; involved in asparagine-linked glycosylation in the endoplasmic reticulum; human ortholog ALG5 can partially complement yeast alg5 mutant","termid":"PBO:0088088"}


id: PBO:0072984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF complex antagonist associated with prostate cancer 1","termid":"PBO:0072984"}


id: GO:0018566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,2-dihydroxynaphthalene-6-sulfonate + O2 = H+ + (Z)-4-(2-hydroxy-5-sulfonatophenyl)-2-oxo-3-butenoate.","definition_xrefs":["UM-BBD_reactionID:r0324"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,2-dihydroxynaphthalene-6-sulfonate 1,8a-dioxygenase activity (obsolete GO:0018566)","synonyms":[{"name":"1,2-dihydroxynaphthalene-6-sulphonate 1,8a-dioxygenase activity","type":"exact"}],"termid":"GO:0018566"}


id: PR:O94447
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slm1 gene.","definition_xrefs":["UniProtKB:O94447","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeletal signaling protein slm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.13c","synonyms":[{"name":"Spom972h-slm1","type":"exact"}],"termid":"PR:O94447"}


id: GO:0045142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DNA triple helix. The formation of triple helical DNA has been evoked in several cellular processes including transcription, replication, and recombination.","definition_xrefs":["PMID:10681538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"triplex DNA binding","termid":"GO:0045142"}


id: GO:0052891
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aliphatic (S)-hydroxynitrile = an aliphatic aldehyde or ketone + cyanide.","definition_xrefs":["PMID:15299689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(S)-hydroxynitrile lyase activity","termid":"GO:0047606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aliphatic (S)-hydroxynitrile lyase activity","secondary_identifiers":["MetaCyc:RXN-11731"],"synonyms":[{"name":"(S)-cyanohydrin carbonyl-lyase (cyanide forming) activity","type":"broad"},{"name":"(S)-cyanohydrin producing hydroxynitrile lyase activity","type":"broad"},{"name":"(S)-hydroxynitrile lyase activity","type":"broad"},{"name":"(S)-oxynitrilase activity","type":"broad"},{"name":"(S)-selective hydroxynitrile lyase activity","type":"broad"}],"termid":"GO:0052891"}


id: PBO:0005751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tyrosine-tRNA ligase (predicted)","termid":"PBO:0005751"}


id: PBO:0111845
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCK subfamily","termid":"PBO:0111845"}


id: GO:0016985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of (1->4)-beta-D-mannosidic linkages in mannans, galactomannans, glucomannans, and galactoglucomannans.","definition_xrefs":["EC:3.2.1.78"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-mannosidase activity","termid":"GO:0004567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"mannan endo-1,4-beta-mannosidase activity","secondary_identifiers":["MetaCyc:3.2.1.78-RXN"],"synonyms":[{"name":"1,4-beta-D-mannan mannanohydrolase activity","type":"related"},{"name":"beta-1,4-mannan 4-mannanohydrolase activity","type":"related"},{"name":"beta-D-mannanase activity","type":"related"},{"name":"beta-mannanase B","type":"related"},{"name":"beta-mannanase activity","type":"broad"},{"name":"endo-1,4-beta-mannanase activity","type":"related"},{"name":"endo-1,4-mannanase activity","type":"broad"},{"name":"endo-beta-1,4-mannase activity","type":"related"},{"name":"endo-beta-mannanase activity","type":"broad"}],"termid":"GO:0016985"}


id: PR:Q9UQY9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell division cycle 7-related protein kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle protein kinase spo4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.18","secondary_identifiers":["UniProtKB:Q9UQY9"],"synonyms":[{"name":"Spom972h-CDC7","type":"exact"},{"name":"sporulation-specific protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UQY9"}


id: GO:0050964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events that contribute to electroception in which an electrical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:dos","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of electrical stimulus involved in sensory perception","termid":"GO:0050963"},{"relation_name":"part_of","term_name":"electroception","termid":"GO:0050956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of electrical stimulus involved in electroception","synonyms":[{"name":"detection of electrical stimulus during electroreception","type":"related"},{"name":"electroception, detection of electrical stimulus","type":"exact"},{"name":"electroception, sensory detection of electrical stimulus","type":"exact"},{"name":"electroception, sensory transduction","type":"exact"},{"name":"electroception, sensory transduction of electrical stimulus","type":"exact"},{"name":"sensory detection of electrical stimulus during electroception","type":"related"},{"name":"sensory transduction of electrical stimulus during electroception","type":"related"}],"termid":"GO:0050964"}


id: PBO:0030977
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_dimethylation_at_centromere_inner_repeat","termid":"PBO:0030977"}


id: PBO:0090334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane guanine and adenine transmembrane transporter","termid":"PBO:0090334"}


id: PBO:0030462
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_isochromosome_formation_with_preferential_breakage_in_the_imr_region","termid":"PBO:0030462"}


id: GO:0009948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the anterior/posterior axis. The anterior-posterior axis is defined by a line that runs from the head or mouth of an organism to the tail or opposite end of the organism.","definition_xrefs":["GOC:go_curators","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"part_of","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior/posterior axis specification","synonyms":[{"name":"anterior/posterior axis determination","type":"related"}],"termid":"GO:0009948"}


id: PBO:0072403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 8","termid":"PBO:0072403"}


id: GO:0052027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts a signal transduction pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host signal transduction pathway","secondary_identifiers":["GO:0052250"],"synonyms":[{"name":"modulation by symbiont of host signal transduction","type":"related"},{"name":"modulation by symbiont of host signal transduction pathway","type":"exact"},{"name":"modulation of host signal transduction by symbiont","type":"exact"},{"name":"modulation of signal transduction in other organism involved in symbiotic interaction","type":"broad"},{"name":"perturbation of host signal transduction pathway","type":"exact"},{"name":"regulation by symbiont of host signal transduction pathway","type":"exact"}],"termid":"GO:0052027"}


id: PBO:0051456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 7-35 (pseudogene)","termid":"PBO:0051456"}


id: PBO:0062342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily K member 1 pseudogene","termid":"PBO:0062342"}


id: PBO:0066274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 1 member H, pseudogene","termid":"PBO:0066274"}


id: MOD:00892
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to D-serine.","definition_xrefs":["PubMed:18025465","PubMed:6893271","RESID:AA0195#CYS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-serine","termid":"MOD:00891"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-serine (Cys)","synonyms":[{"name":"(R)-2-amino-3-hydroxypropanoic acid","type":"exact"},{"name":"D-serine","type":"exact"},{"name":"MOD_RES D-serine (Cys)","type":"exact"}],"termid":"MOD:00892"}


id: PBO:0039581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin 1","termid":"PBO:0039581"}


id: PBO:0061795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odontogenesis associated phosphoprotein","termid":"PBO:0061795"}


id: PBO:0086516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; not conserved in closely related Saccharomyces species; multicopy suppressor of glucose transport defects, likely due to the presence of an HXT4 regulatory element in the region","termid":"PBO:0086516"}


id: GO:0031831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 5B serotonin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 5B serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 5B receptor binding","type":"exact"},{"name":"type 5B serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031831"}


id: GO:0010123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The anaerobic chemical reactions and pathways resulting in the breakdown of acetate to form butyrate, ethanol, acetone and butanol.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete acetate catabolic process to butyrate, ethanol, acetone and butanol (obsolete GO:0010123)","synonyms":[{"name":"acetate fermentation to butyrate, ethanol, acetone and butanol","type":"exact"}],"termid":"GO:0010123"}


id: PBO:0078667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 3-2","termid":"PBO:0078667"}


id: PBO:0046210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 3","termid":"PBO:0046210"}


id: GO:0014051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of gamma-aminobutyric acid by a cell or a tissue. The gamma-aminobutyric acid is the principal inhibitory neurotransmitter in the brain but is also found in several extraneural tissues.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-aminobutyric acid transport","termid":"GO:0015812"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"gamma-aminobutyric acid secretion","synonyms":[{"name":"GABA secretion","type":"exact"}],"termid":"GO:0014051"}


id: PR:O94730
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cmp7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1604.18c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.18c","synonyms":[{"name":"Spom972h-cmp7","type":"exact"}],"termid":"PR:O94730"}


id: GO:0034781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N-cyclohexylformamide + OH- = cyclohexylamine + formate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete N-cyclohexylformamide amidohydrolase activity (obsolete GO:0034781)","termid":"GO:0034781"}


id: GO:0102967
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6E)-8-hydroxygeraniol + NADP = (6E)-8-hydroxygeranial + NADPH + H+.","definition_xrefs":["GOC:pz","RHEA:32607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"10-hydroxygeraniol oxidoreductase activity","secondary_identifiers":["MetaCyc:RXN-9367"],"termid":"GO:0102967"}


id: PATO:0002043
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An anterior-posterior diameter quality which is relatively large.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased diameter","termid":"PATO:0001714"},{"relation_name":"is_a","term_name":"anterior-posterior diameter","termid":"PATO:0002041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased anterior-posterior diameter","synonyms":[{"name":"high anterior-posterior diameter","type":"exact"}],"termid":"PATO:0002043"}


id: PR:Q9P7Z6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC5E4.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7Z6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C5E4.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC5E4.10c","synonyms":[{"name":"Spom972h-SPCC5E4.10c","type":"exact"}],"termid":"PR:Q9P7Z6"}


id: GO:1904661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sensory perception of bitter taste.","definition_xrefs":["PMID:1716172","GO_REF:0000058","GOC:mr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nervous system process","termid":"GO:0031645"},{"relation_name":"is_a","term_name":"regulation of sensory perception of bitter taste","termid":"GO:1904660"},{"relation_name":"negatively_regulates","term_name":"sensory perception of bitter taste","termid":"GO:0050913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sensory perception of bitter taste","synonyms":[{"name":"down regulation of bitter taste perception","type":"exact"},{"name":"down regulation of sensory perception of bitter taste","type":"exact"},{"name":"down-regulation of bitter taste perception","type":"exact"},{"name":"down-regulation of sensory perception of bitter taste","type":"exact"},{"name":"downregulation of bitter taste perception","type":"exact"},{"name":"downregulation of sensory perception of bitter taste","type":"exact"},{"name":"inhibition of bitter taste perception","type":"narrow"},{"name":"inhibition of sensory perception of bitter taste","type":"narrow"},{"name":"negative regulation of bitter taste perception","type":"exact"}],"termid":"GO:1904661"}


id: PBO:0062021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily M member 2","termid":"PBO:0062021"}


id: PBO:0041377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 open reading frame 54","termid":"PBO:0041377"}


id: PBO:0091055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blue light signalling transcription factor, zf-GATA type Wcs2","termid":"PBO:0091055"}


id: PBO:0049777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 9 pseudogene 5","termid":"PBO:0049777"}


id: PBO:0066830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 129","termid":"PBO:0066830"}


id: PATO:0001456
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's independence on oxygen.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity to oxygen","termid":"PATO:0001454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaerobic","termid":"PATO:0001456"}


id: GO:0007097
data:
  {"annotated_genes":["SJAG_00113","SJAG_02561","SJAG_01370","SJAG_04001","SJAG_03835","SJAG_02509","SJAG_02286","SJAG_02431","SJAG_02045","SJAG_03073","SJAG_04143","SJAG_05185","SJAG_00140","SJAG_01863","SJAG_00397","SJAG_00368","SJAG_04387","SJAG_04003","SJAG_01613","SJAG_02737","SJAG_04597","SJAG_01662","SJAG_03264","SJAG_03673"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108847],"is_not":false,"summary":null,"term":"GO:0007097"},{"annotations":[107126,87899,91279,107480,93646,99042,87057,99333,107301,113034,87447,110033,83839,97500,96797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030989"},{"annotations":[107303,97501,102649],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[105681,113038,97512,100094,103498,108211,110035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098863"},{"annotations":[95301,93720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090561"},{"annotations":[91281,83843,87449,93648,95302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000743"},{"annotations":[90483],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902854"}]},"cv_name":"biological_process","definition":"The directed movement of the nucleus to a specific location within a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"},{"relation_name":"is_a","term_name":"nucleus localization","termid":"GO:0051647"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_01370":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01863":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02431":null,"SJAG_02509":null,"SJAG_02561":null,"SJAG_02737":null,"SJAG_03073":null,"SJAG_03264":null,"SJAG_03673":null,"SJAG_03835":null,"SJAG_04001":null,"SJAG_04003":null,"SJAG_04143":null,"SJAG_04387":null,"SJAG_04597":null,"SJAG_05185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"nuclear migration","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0040023"],"synonyms":[{"name":"establishment of cell nucleus localization","type":"related"},{"name":"establishment of localization of nucleus","type":"related"},{"name":"establishment of nucleus localisation","type":"related"},{"name":"establishment of nucleus localization","type":"related"},{"name":"establishment of position of nucleus","type":"exact"},{"name":"nuclear movement","type":"exact"},{"name":"nuclear positioning","type":"exact"},{"name":"nucleus migration","type":"exact"},{"name":"nucleus positioning","type":"exact"},{"name":"positioning of nucleus","type":"exact"}],"termid":"GO:0007097","terms_by_termid":{"GO:0000743":null,"GO:0007097":null,"GO:0030989":null,"GO:0032118":null,"GO:0090561":null,"GO:0098863":null,"GO:1902854":null}}


id: PBO:0049444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase, very large interferon inducible pseudogene 2","termid":"PBO:0049444"}


id: PBO:0085397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane (PM) ubiquitin ligase-substrate adaptor; involved in cell wall chitin deposition; ubiquitinates and down-regulates chitin synthase Chs3p abundance at PM via calcineurin/Crz1 signaling pathway which regulates RCR1 expression; delivered to PM by exomer complex using novel PM sorting motif; RCR1 has a paralog, RCR2, that arose from the whole genome duplication","termid":"PBO:0085397"}


id: PBO:0046736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonuclease 3'-5' domain containing 2","termid":"PBO:0046736"}


id: PBO:0002484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp108","termid":"PBO:0002484"}


id: PBO:0071387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 10","termid":"PBO:0071387"}


id: PBO:0063539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEAK family member 3","termid":"PBO:0063539"}


id: FYPO:0000196
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype in which prospore formation is abnormal. In prospore formation, each haploid nucleus becomes encapsulated by a double membrane.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation","termid":"FYPO:0000121"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly","termid":"FYPO:0000336"},{"relation_name":"part_of","term_name":"abnormal sporulation","termid":"FYPO:0000121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000121"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000121","FYPO:0001985","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal prospore formation","synonyms":[{"name":"abnormal ascospore-type prospore assembly","type":"exact"},{"name":"abnormal ascospore-type prospore formation","type":"exact"},{"name":"abnormal forespore formation","type":"exact"}],"termid":"FYPO:0000196"}


id: GO:0052013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of macromolecules within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by symbiont of host macromolecule (obsolete GO:0052013)","synonyms":[{"name":"catabolism by organism of host macromolecule","type":"exact"}],"termid":"GO:0052013"}


id: GO:0004294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal tripeptide from a polypeptide at neutral pH.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tripeptidyl-peptidase II activity (obsolete GO:0004294)","synonyms":[{"name":"tripeptidyl-peptidase II activity","type":"exact"}],"termid":"GO:0004294"}


id: PATO:0001304
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in a bearer by virtue of whether the bearer exhibits temperature variation or change.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability","termid":"PATO:0001303"},{"relation_name":"towards","term_name":"temperature","termid":"PATO:0000146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variability of temperature","termid":"PATO:0001304"}


id: PATO:0001173
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001173 urine glucose composition value (obsolete PATO:0001173)","termid":"PATO:0001173"}


id: GO:0003021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about the levels of carbon dioxide are received and are converted to a molecular signal by chemoreceptors in the carotid bodies and the aortic bodies.","definition_xrefs":["ISBN:0323031951","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of carbon dioxide","termid":"GO:0003031"},{"relation_name":"part_of","term_name":"detection of hypoxic conditions in blood by chemoreceptor signaling","termid":"GO:0002007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of increased carbon dioxide by chemoreceptor signaling","synonyms":[{"name":"detection of increased carbon dioxide by chemoreceptor signalling","type":"exact"}],"termid":"GO:0003021"}


id: PBO:0041455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C10orf67 antisense RNA 1","termid":"PBO:0041455"}


id: GO:0018935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nitrilotriacetate, the aminotricarboxylic acid N(CH2COO-)3, that occur in the presence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrilotriacetate metabolic process","termid":"GO:0018934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"aerobic nitrilotriacetate metabolic process","synonyms":[{"name":"aerobic nitrilotriacetate metabolism","type":"exact"}],"termid":"GO:0018935"}


id: PR:Q10076
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hsr1 gene.","definition_xrefs":["UniProtKB:Q10076","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrogen peroxide stress regulator 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.11","synonyms":[{"name":"Spom972h-hsr1","type":"exact"}],"termid":"PR:Q10076"}


id: PBO:0004917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain protein 2","termid":"PBO:0004917"}


id: PR:O74871
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear protein Hcc-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04388","PANTHER:PTHR21594:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C31H12.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC31H12.03c","secondary_identifiers":["UniProtKB:O74871"],"synonyms":[{"name":"Spom972h-SARNP","type":"exact"}],"termid":"PR:O74871"}


id: PBO:0041720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calumenin","termid":"PBO:0041720"}


id: PBO:0084428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major stress-induced structural GPI-cell wall glycoprotein; associates with translating ribosomes, possible role in mitochondrial genome maintenance; ORF contains two distinct variable minisatellites; SED1 has a paralog, SPI1, that arose from the whole genome duplication","termid":"PBO:0084428"}


id: GO:0036158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an axonemal dynein outer arm, an outer arm structure present on the outer doublet microtubules of ciliary and flagellar axonemes.","definition_xrefs":["GOC:BHF","GOC:vk","PMID:19944400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal dynein complex assembly","termid":"GO:0070286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0007010","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"outer dynein arm assembly","synonyms":[{"name":"ODA assembly","type":"exact"}],"termid":"GO:0036158"}


id: GO:0015160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of beta-glucans from one side of a membrane to the other. Beta-glucans are compounds composed of glucose residues linked by beta-glucosidic bonds.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide transmembrane transporter activity","termid":"GO:0015159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"beta-glucan transmembrane transporter activity","termid":"GO:0015160"}


id: GO:0015970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of guanine tetraphosphate (5'-ppGpp-3'), a derivative of guanine riboside with four phosphates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"guanosine tetraphosphate metabolic process","termid":"GO:0015969"},{"relation_name":"is_a","term_name":"purine ribonucleoside bisphosphate biosynthetic process","termid":"GO:0034036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"guanosine tetraphosphate biosynthetic process","synonyms":[{"name":"guanosine tetraphosphate (5'-ppGpp-3') biosynthesis","type":"exact"},{"name":"guanosine tetraphosphate (5'-ppGpp-3') biosynthetic process","type":"exact"},{"name":"guanosine tetraphosphate anabolism","type":"exact"},{"name":"guanosine tetraphosphate biosynthesis","type":"exact"},{"name":"guanosine tetraphosphate formation","type":"exact"},{"name":"guanosine tetraphosphate synthesis","type":"exact"}],"termid":"GO:0015970"}


id: PBO:0036104
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_transport_on_microtubule_tip_to_cell_tip_cortex_during_vegetative_growth","termid":"PBO:0036104"}


id: PBO:0108762
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ageing-Associated LncRNA","termid":"PBO:0108762"}


id: PBO:0087065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L31B; associates with karyopherin Sxm1p; loss of both Rpl31p and Rpl39p confers lethality; homologous to mammalian ribosomal protein L31, no bacterial homolog; RPL31B has a paralog, RPL31A, that arose from the whole genome duplication","termid":"PBO:0087065"}


id: PBO:0065853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11 family interacting protein 4","termid":"PBO:0065853"}


id: GO:0005427
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a oligopeptide from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by proton movement.","definition_xrefs":["OMIM:600544","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"proton-dependent oligopeptide secondary active transmembrane transporter activity","synonyms":[{"name":"hydrogen/oligopeptide symporter","type":"related"},{"name":"proton-dependent oligopeptide transporter activity","type":"exact"}],"termid":"GO:0005427"}


id: PBO:0060163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 11 (pseudogene)","termid":"PBO:0060163"}


id: PBO:0050684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 11","termid":"PBO:0050684"}


id: PBO:0003922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit Aim27 (predicted)","termid":"PBO:0003922"}


id: PBO:0062238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BB member 1 pseudogene","termid":"PBO:0062238"}


id: PBO:0054460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1857","termid":"PBO:0054460"}


id: FYECO:0000125
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were grown to exponential phase.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth timing","termid":"FYECO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth to exponential phase","termid":"FYECO:0000125"}


id: PBO:0113150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GYF domain protein; involved in COPII vesicle formation; regulates Cdc48p function in transcription stress response; interacts with the Sec23p/Sec24p subcomplex; overexpression suppresses the temperature sensitivity of a myo2 mutant; homologous to human GIGYF1 and GIGYF2; similar to S. pombe Mpd2; SMY2 has a paralog, SYH1, that arose from the whole genome duplication","termid":"PBO:0113150"}


id: PBO:0113023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional DNA-directed DNA polymerase/deoxycytidyl transferase; involved in repair of abasic sites and adducted guanines in damaged DNA by translesion synthesis (TLS); forms a complex with the subunits of DNA polymerase zeta, Rev3p and Rev7p; relocalizes from nucleus to cytoplasm upon DNA replication stress; may be involved in meiosis","termid":"PBO:0113023"}


id: GO:0030445
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The wall surrounding a cell of a dimorphic fungus growing in the single-cell budding yeast form, in contrast to the filamentous or hyphal form.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal-type cell wall","termid":"GO:0009277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"yeast-form cell wall","termid":"GO:0030445"}


id: PBO:0044922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DGCR8 microprocessor complex subunit","termid":"PBO:0044922"}


id: GO:0007285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phase of growth and gene expression that male germ cells undergo as they enter the spermatocyte stage. The cells grow in volume and transcribe most of the gene products needed for the morphological events that follow meiosis.","definition_xrefs":["GOC:jid","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"part_of","term_name":"spermatogenesis","termid":"GO:0007283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary spermatocyte growth","termid":"GO:0007285"}


id: GO:0034953
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: perillyl-CoA + H2O = 2-hydroxy-4-isopropenylcyclohexane-1-carboxyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete perillyl-CoA hydratase activity (obsolete GO:0034953)","termid":"GO:0034953"}


id: PBO:0001519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain","termid":"PBO:0001519"}


id: PBO:0089443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-fungal binuclear cluster type (predicted)","termid":"PBO:0089443"}


id: GO:0034904
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-chloro-2-oxopent-4-enoate + H2O = 5-chloro-4-hydroxy-2-oxopentanate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 5-chloro-2-oxopent-4-enoate hydratase activity (obsolete GO:0034904)","termid":"GO:0034904"}


id: GO:0004029
data:
  {"annotated_genes":["SJAG_02961","SJAG_03786","SJAG_00482"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74963,96938,102882],"is_not":false,"summary":null,"term":"GO:0004029"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an aldehyde + H2O + NAD+ = a carboxylate + 2 H+ + NADH.","definition_xrefs":["RHEA:16185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase [NAD(P)+] activity","termid":"GO:0004030"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00482":null,"SJAG_02961":null,"SJAG_03786":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"aldehyde dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-380608","Reactome:R-HSA-5696091","UM-BBD_reactionID:r0023","Reactome:R-HSA-6808496","Reactome:R-HSA-6813749","Wikipedia:Aldehyde_dehydrogenase_(NAD+)","EC:1.2.1.3","Reactome:R-HSA-389609","Reactome:R-HSA-6808487","UM-BBD_reactionID:r0605","UM-BBD_reactionID:r0003","Reactome:R-HSA-71723","Reactome:R-HSA-5692261","Reactome:R-HSA-71691","MetaCyc:ALDHDEHYDROG-RXN"],"synonyms":[{"name":"CoA-independent aldehyde dehydrogenase activity","type":"related"},{"name":"NAD-aldehyde dehydrogenase activity","type":"related"},{"name":"NAD-dependent 4-hydroxynonenal dehydrogenase activity","type":"related"},{"name":"NAD-dependent aldehyde dehydrogenase activity","type":"related"},{"name":"NAD-linked aldehyde dehydrogenase activity","type":"related"},{"name":"aldehyde dehydrogenase (NAD+)","type":"related"},{"name":"aldehyde:NAD+ oxidoreductase activity","type":"related"},{"name":"m-methylbenzaldehyde dehydrogenase activity","type":"related"},{"name":"propionaldehyde dehydrogenase activity","type":"related"}],"termid":"GO:0004029","terms_by_termid":{"GO:0004029":null}}


id: PBO:0059658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 24","termid":"PBO:0059658"}


id: PBO:0054667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2073","termid":"PBO:0054667"}


id: PR:Q9USI4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A SAC3 domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAC3 family protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC70.06","secondary_identifiers":["UniProtKB:Q9USI4"],"synonyms":[{"name":"Spom972h-SAC3D1","type":"exact"}],"termid":"PR:Q9USI4"}


id: GO:1900662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of emericellamide A biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of emericellamide biosynthetic process","termid":"GO:1900659"},{"relation_name":"is_a","term_name":"regulation of emericellamide A biosynthetic process","termid":"GO:1900661"},{"relation_name":"negatively_regulates","term_name":"emericellamide A biosynthetic process","termid":"GO:1900617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0006629","GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of emericellamide A biosynthetic process","synonyms":[{"name":"down regulation of emericellamide A anabolism","type":"exact"},{"name":"down regulation of emericellamide A biosynthesis","type":"exact"},{"name":"down regulation of emericellamide A biosynthetic process","type":"exact"},{"name":"down regulation of emericellamide A formation","type":"exact"},{"name":"down regulation of emericellamide A synthesis","type":"exact"},{"name":"down-regulation of emericellamide A anabolism","type":"exact"},{"name":"down-regulation of emericellamide A biosynthesis","type":"exact"},{"name":"down-regulation of emericellamide A biosynthetic process","type":"exact"},{"name":"down-regulation of emericellamide A formation","type":"exact"},{"name":"down-regulation of emericellamide A synthesis","type":"exact"},{"name":"downregulation of emericellamide A anabolism","type":"exact"},{"name":"downregulation of emericellamide A biosynthesis","type":"exact"},{"name":"downregulation of emericellamide A biosynthetic process","type":"exact"},{"name":"downregulation of emericellamide A formation","type":"exact"},{"name":"downregulation of emericellamide A synthesis","type":"exact"},{"name":"inhibition of emericellamide A anabolism","type":"exact"},{"name":"inhibition of emericellamide A biosynthesis","type":"exact"},{"name":"inhibition of emericellamide A biosynthetic process","type":"narrow"},{"name":"inhibition of emericellamide A formation","type":"exact"},{"name":"inhibition of emericellamide A synthesis","type":"exact"},{"name":"negative regulation of emericellamide A anabolism","type":"exact"},{"name":"negative regulation of emericellamide A biosynthesis","type":"exact"},{"name":"negative regulation of emericellamide A formation","type":"exact"},{"name":"negative regulation of emericellamide A synthesis","type":"exact"}],"termid":"GO:1900662"}


id: PBO:0027576
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_endoplasmic_reticulum","termid":"PBO:0027576"}


id: GO:0009867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by jasmonic acid.","definition_xrefs":["PMID:16478936","GOC:jy","PMID:19522558","PMID:20159850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"part_of","term_name":"cellular response to jasmonic acid stimulus","termid":"GO:0071395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"jasmonic acid mediated signaling pathway","synonyms":[{"name":"JA signaling","type":"exact"},{"name":"jasmonate signaling","type":"related"},{"name":"jasmonic acid mediated signalling pathway","type":"exact"}],"termid":"GO:0009867"}


id: GO:0070307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a lens fiber cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a lens fiber cell fate. A lens fiber cell is any of the elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye.","definition_xrefs":["GOC:mah","PMID:7693735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"lens fiber cell differentiation","termid":"GO:0070306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens fiber cell development","synonyms":[{"name":"lens fibre cell development","type":"exact"}],"termid":"GO:0070307"}


id: PBO:0055277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2704","termid":"PBO:0055277"}


id: PBO:0057653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1245b","termid":"PBO:0057653"}


id: GO:0035510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an alkyl group from one or more nucleotides within an DNA molecule.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA modification","termid":"GO:0006304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA dealkylation","termid":"GO:0035510"}


id: GO:0120033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of plasma membrane bounded cell projection assembly.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell projection organization","termid":"GO:0031345"},{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120032"},{"relation_name":"negatively_regulates","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120033"}


id: GO:0072745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antimycin A stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"response to antimycin A","termid":"GO:1901325"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to antimycin A","termid":"GO:0072745"}


id: PBO:0071937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 14","termid":"PBO:0071937"}


id: GO:0004991
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with parathyroid hormone to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"parathyroid hormone receptor activity","termid":"GO:0004991"}


id: PBO:0049586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 4","termid":"PBO:0049586"}


id: GO:0071931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases transcription as part of the G1/S transition of the mitotic cell cycle.","definition_xrefs":["GOC:mah","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription involved in G1/S transition of mitotic cell cycle (obsolete GO:0071931)","synonyms":[{"name":"positive regulation of transcription from RNA polymerase II promoter during G1/S phase of mitotic cell cycle","type":"related"},{"name":"positive regulation of transcription from RNA polymerase II promoter involved in G1/S transition of mitotic cell cycle","type":"exact"}],"termid":"GO:0071931"}


id: PBO:0042513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin related family member 18, pseudogene","termid":"PBO:0042513"}


id: GO:1900352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methanofuran biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of pteridine metabolic process","termid":"GO:0045863"},{"relation_name":"is_a","term_name":"regulation of methanofuran biosynthetic process","termid":"GO:1900351"},{"relation_name":"is_a","term_name":"negative regulation of methanofuran metabolic process","termid":"GO:1900355"},{"relation_name":"negatively_regulates","term_name":"methanofuran biosynthetic process","termid":"GO:2001120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of methanofuran biosynthetic process","synonyms":[{"name":"down regulation of methanofuran biosynthesis","type":"exact"},{"name":"down regulation of methanofuran biosynthetic process","type":"exact"},{"name":"down-regulation of methanofuran biosynthesis","type":"exact"},{"name":"down-regulation of methanofuran biosynthetic process","type":"exact"},{"name":"downregulation of methanofuran biosynthesis","type":"exact"},{"name":"downregulation of methanofuran biosynthetic process","type":"exact"},{"name":"inhibition of methanofuran biosynthesis","type":"exact"},{"name":"inhibition of methanofuran biosynthetic process","type":"narrow"},{"name":"negative regulation of methanofuran biosynthesis","type":"exact"}],"termid":"GO:1900352"}


id: FYPO:0003299
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which ubiquitin-dependent protein degradation via the N-end rule pathway is normal (i.e. indistinguishable from wild type). In the N-end rule pathway, destabilizing N-terminal residues (N-degrons) in substrates are recognized by E3 ligases (N-recognins), whereupon the substrates are linked to ubiquitin and then delivered to the proteasome for degradation.","definition_xrefs":["PomBase:mah","GO:0071596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation during vegetative growth","termid":"FYPO:0002800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein degradation via N-end rule pathway during vegetative growth","synonyms":[{"name":"normal protein degradation via N-end rule pathway during mitotic cell cycle","type":"related"},{"name":"normal ubiquitin-dependent protein breakdown via the N-end rule pathway during vegetative growth","type":"exact"},{"name":"normal ubiquitin-dependent protein catabolic process via the N-end rule pathway during vegetative growth","type":"exact"},{"name":"normal ubiquitin-dependent protein catabolism via the N-end rule pathway during vegetative growth","type":"exact"},{"name":"normal ubiquitin-dependent protein degradation via the N-end rule pathway during vegetative growth","type":"exact"}],"termid":"FYPO:0003299"}


id: PBO:0057657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1249","termid":"PBO:0057657"}


id: GO:0106218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the exopolysaccharide galactosaminogalactan. GAG is a heteropolysaccharide composed of alpha-1,4 linked galactose, N-acetyl galactosamine (GalNAc) and galactosamine (GalN).","definition_xrefs":["PMID:26932183","PMID:26492565","PMID:22102815","PMID:24257745","PMID:173713","PMID:27048799","PMID:30667338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal-type cell wall polysaccharide biosynthetic process","termid":"GO:0051278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044085","GO:0071554"],"is_obsolete":false,"name":"galactosaminogalactan biosynthetic process","synonyms":[{"name":"GAG biosynthetic process","type":"related"},{"name":"galactosaminogalactan anabolism","type":"related"},{"name":"galactosaminogalactan biosynthesis","type":"related"},{"name":"galactosaminogalactan formation","type":"related"},{"name":"galactosaminogalactan synthesis","type":"related"}],"termid":"GO:0106218"}


id: GO:0033461
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GGU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"GGU codon-amino acid adaptor activity","synonyms":[{"name":"GGT codon-amino acid adaptor activity","type":"exact"},{"name":"glycine tRNA","type":"related"}],"termid":"GO:0033461"}


id: PBO:0078601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 14","termid":"PBO:0078601"}


id: PBO:0078542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 34","termid":"PBO:0078542"}


id: PBO:0062224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AS member 1","termid":"PBO:0062224"}


id: PBO:0081035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 12C","termid":"PBO:0081035"}


id: PBO:0065065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteoglycan 3, pro eosinophil major basic protein 2","termid":"PBO:0065065"}


id: GO:0047081
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + NADPH + H+ + 3-hydroxy-2-methylpyridine-5-carboxylate = NADP+ + 2-(acetamidomethylene)succinate.","definition_xrefs":["MetaCyc:1.14.12.4-RXN","EC:1.14.13.242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-hydroxy-2-methylpyridinecarboxylate dioxygenase activity","secondary_identifiers":["RHEA:10864"],"synonyms":[{"name":"2-methyl-3-hydroxypyridine 5-carboxylic acid dioxygenase activity","type":"related"},{"name":"3-hydroxy-2-methylpyridine-5-carboxylate,NADPH:oxygen oxidoreductase (decyclizing)","type":"related"},{"name":"3-hydroxy-3-methylpyridinecarboxylate dioxygenase activity","type":"related"},{"name":"methylhydroxypyridine carboxylate dioxygenase activity","type":"related"},{"name":"methylhydroxypyridinecarboxylate oxidase activity","type":"related"}],"termid":"GO:0047081"}


id: GO:0009068
data:
  {"annotated_genes":["SJAG_00830","SJAG_00714","SJAG_00881","SJAG_02450"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006530"},{"annotations":[107894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[99861,90275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of amino acids of the aspartate family, comprising asparagine, aspartate, lysine, methionine and threonine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid metabolic process","termid":"GO:0009066"},{"relation_name":"is_a","term_name":"L-amino acid catabolic process","termid":"GO:0170035"},{"relation_name":"is_a","term_name":"proteinogenic amino acid catabolic process","termid":"GO:0170040"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00714":null,"SJAG_00830":null,"SJAG_00881":null,"SJAG_02450":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"aspartate family amino acid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"aspartate family amino acid breakdown","type":"exact"},{"name":"aspartate family amino acid catabolism","type":"exact"},{"name":"aspartate family amino acid degradation","type":"exact"}],"termid":"GO:0009068","terms_by_termid":{"GO:0006530":null,"GO:0006533":null,"GO:0006567":null}}


id: GO:0047239
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxymandelonitrile + UDP-D-glucose = H+ + taxiphyllin + UDP.","definition_xrefs":["EC:2.4.1.178","RHEA:15961"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"hydroxymandelonitrile glucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02709","MetaCyc:2.4.1.178-RXN"],"synonyms":[{"name":"UDP-glucose:4-hydroxymandelonitrile glucosyltransferase activity","type":"related"},{"name":"UDPglucose:4-hydroxymandelonitrile glucosyltransferase activity","type":"related"},{"name":"cyanohydrin glucosyltransferase activity","type":"related"}],"termid":"GO:0047239"}


id: PR:O94656
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy protein 16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC405.05","synonyms":[{"name":"Spom972h-atg16","type":"exact"}],"termid":"PR:O94656"}


id: GO:1903472
data:
  {"annotated_genes":["SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99780],"is_not":false,"summary":null,"term":"GO:1903472"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic actomyosin contractile ring contraction.","definition_xrefs":["GO_REF:0000058","GOC:mtg_cell_cycle","GOC:TermGenie","PMID:1234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitotic cytokinetic process","termid":"GO:1903437"},{"relation_name":"is_a","term_name":"regulation of mitotic actomyosin contractile ring contraction","termid":"GO:1903471"},{"relation_name":"negatively_regulates","term_name":"mitotic actomyosin contractile ring contraction","termid":"GO:1902404"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"negatively_regulates","termid":"GO:0000281"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0000281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic actomyosin contractile ring contraction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"down regulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"down regulation of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"down-regulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"down-regulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"down-regulation of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"downregulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"downregulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"downregulation of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"inhibition of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"narrow"},{"name":"inhibition of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"narrow"},{"name":"inhibition of mitotic actomyosin contractile ring contraction","type":"narrow"},{"name":"negative regulation of contractile ring contraction involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"negative regulation of cytokinesis, actomyosin ring contraction involved in mitotic cell cycle","type":"exact"},{"name":"negative regulation of mitotic actomyosin contractile ring constriction","type":"exact"}],"termid":"GO:1903472","terms_by_termid":{"GO:1903472":null}}


id: GO:0070424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway (NLR) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0035872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","synonyms":[{"name":"regulation of NOD signaling pathway","type":"narrow"},{"name":"regulation of nucleotide-binding oligomerization domain containing signaling pathway","type":"narrow"},{"name":"regulation of nucleotide-binding oligomerization domain containing signalling pathway","type":"narrow"}],"termid":"GO:0070424"}


id: FYPO:0007992
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is decreased during metaphase.","definition_xrefs":["PomBase:mlr","PMID:35286199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle pole body during mitosis","termid":"FYPO:0002822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle pole body during metaphase","synonyms":[{"name":"decreased protein localisation to mitotic spindle pole body during metaphase","type":"exact"},{"name":"decreased protein localization to mitotic SPB during metaphase","type":"exact"}],"termid":"FYPO:0007992"}


id: FYPO:0000130
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the spindle is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000120","FYPO:0001985","FYPO:0002399","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"short spindle","synonyms":[{"name":"decreased spindle length","type":"exact"},{"name":"short spindles","type":"exact"},{"name":"spindle defects, short spindles","type":"exact"}],"termid":"FYPO:0000130"}


id: FYPO:0006753
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 20 of histone H4 in heterochromatin at subtelomeric regions occurs to a lower extent than normal.","definition_xrefs":["PMID:29632066","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased H4-K20 dimethylation during vegetative growth","termid":"FYPO:0005028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H4-K20 dimethylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"decreased histone H4 K20 dimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased histone H4-K20 dimethylation at subtelomeres during vegetative growth","type":"exact"},{"name":"decreased histone H4-K20 dimethylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased histone H4-K20 dimethylation at telomeric heterochromatin during vegetative growth","type":"related"},{"name":"decreased histone H4K20me2 at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased histone lysine H4 K20 dimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"reduced histone H4-K20 dimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0006753"}


id: PBO:0068898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 140, pseudogene","termid":"PBO:0068898"}


id: _global:involved_in
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c involved_in p if and only if c enables some process p', and p' is part of p","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"involved_in_or_involved_in_regulation_of","termid":"_global:involved_in_or_involved_in_regulation_of"},{"relation_name":"is_a","term_name":"participates_in","termid":"_global:participates_in"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in","secondary_identifiers":["RO:0002331"],"termid":"_global:involved_in"}


id: GO:1900183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xanthone-containing compound biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"regulates","term_name":"xanthone-containing compound biosynthetic process","termid":"GO:2001307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of xanthone-containing compound biosynthetic process","synonyms":[{"name":"regulation of xanthone biosynthesis","type":"narrow"},{"name":"regulation of xanthone biosynthetic process","type":"narrow"},{"name":"regulation of xanthone-containing compound anabolism","type":"exact"},{"name":"regulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"regulation of xanthone-containing compound formation","type":"exact"},{"name":"regulation of xanthone-containing compound synthesis","type":"exact"}],"termid":"GO:1900183"}


id: PBO:0078468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-His (anticodon GTG) 1-6","termid":"PBO:0078468"}


id: PR:000050484
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Ras GTPase-activating-like protein rng2 (Schizosaccharomyces pombe) that has been phosphorylated at the positions equivalent to Ser-199 and Ser-207 of the amino acid sequence represented by UniProtKB:O14188. Example: UniProtKB:O14188, Ser-199/Ser-207, MOD:00046.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:33131769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ras GTPase-activating-like protein rng2 (Schizosaccharomyces pombe)","termid":"PR:000050483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rng2/Phos:(S199,S207)","pombase_gene_id":"SPAC4F8.13c","synonyms":[{"name":"PomBase_original_PRO_term_name: Ras GTPase-activating-like protein rng2 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rng2/Phos:1","type":"exact"},{"name":"UniProtKB:O14188, Ser-199/Ser-207, MOD:00046","type":"narrow"},{"name":"rng2/Phos:(S199,S207)","type":"exact"}],"termid":"PR:000050484"}


id: PBO:0051248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-2-1 (pseudogene)","termid":"PBO:0051248"}


id: PBO:0016551
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by human U2AF2","termid":"PBO:0016551"}


id: PBO:0005770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twinfilin (predicted)","termid":"PBO:0005770"}


id: GO:0180006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: RNA polymerase II large subunit CTD heptapeptide repeat--phospho-L-serine (consensus YSPTSPS)(position 2) + H2O = RNA polymerase II large subunit + phosphate.","definition_xrefs":["PMID:22622228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat phosphatase activity","termid":"GO:0008420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004721"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0016787","GO:0016788","GO:0003674","GO:0004721"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat S2 phosphatase activity","synonyms":[{"name":"RNA polymerase II C-terminal domain S2 phosphatase activity","type":"exact"}],"termid":"GO:0180006"}


id: FYPO:0001421
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein processing is abnormal. Protein processing is the cleavage of one or more bonds within a protein that leads to the formation of mature, fully functional protein.","definition_xrefs":["PomBase:mah","GO:0030163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein metabolic process during vegetative growth","termid":"FYPO:0000328"},{"relation_name":"is_a","term_name":"abnormal protein processing","termid":"FYPO:0006374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0002274","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein processing during vegetative growth","synonyms":[{"name":"abnormal protein cleavage during vegetative growth","type":"related"},{"name":"abnormal protein maturation by peptide bond cleavage during vegetative growth","type":"exact"},{"name":"abnormal protein maturation by peptide bond hydrolysis during vegetative growth","type":"exact"},{"name":"abnormal protein processing during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001421"}


id: SO:0002326
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A splice_donor_variant (SO:0001575) that allows the transcript to escape nonsense-mediated decay (NMD).","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_donor_variant","termid":"SO:0001575"},{"relation_name":"is_a","term_name":"NMD_escaping_variant","termid":"SO:0002320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_donor_variant_NMD_escaping","synonyms":[{"name":"splice donor variant-NMD escaping","type":"exact"},{"name":"splice donor variant-nonsense-mediated decay escaping","type":"exact"}],"termid":"SO:0002326"}


id: PBO:0061511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSA2 pseudogene 1","termid":"PBO:0061511"}


id: PBO:0077215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery associated 7 homolog","termid":"PBO:0077215"}


id: PBO:0109938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase, small-subunit processome Dhx37","termid":"PBO:0109938"}


id: GO:1901348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of secondary cell wall biogenesis.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of cell wall organization or biogenesis","termid":"GO:1903340"},{"relation_name":"is_a","term_name":"regulation of secondary cell wall biogenesis","termid":"GO:2000652"},{"relation_name":"positively_regulates","term_name":"plant-type secondary cell wall biogenesis","termid":"GO:0009834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0071554"},{"rel_name":"positively_regulates","termid":"GO:0071554"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0071554","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of secondary cell wall biogenesis","synonyms":[{"name":"activation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"activation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"activation of secondary cell wall anabolism","type":"broad"},{"name":"activation of secondary cell wall biogenesis","type":"narrow"},{"name":"activation of secondary cell wall biosynthetic process","type":"broad"},{"name":"activation of secondary cell wall formation","type":"broad"},{"name":"activation of secondary cell wall synthesis","type":"broad"},{"name":"positive regulation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"positive regulation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"positive regulation of secondary cell wall anabolism","type":"broad"},{"name":"positive regulation of secondary cell wall biosynthetic process","type":"broad"},{"name":"positive regulation of secondary cell wall formation","type":"broad"},{"name":"positive regulation of secondary cell wall synthesis","type":"broad"},{"name":"up regulation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"up regulation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"up regulation of secondary cell wall anabolism","type":"broad"},{"name":"up regulation of secondary cell wall biogenesis","type":"exact"},{"name":"up regulation of secondary cell wall biosynthetic process","type":"broad"},{"name":"up regulation of secondary cell wall formation","type":"broad"},{"name":"up regulation of secondary cell wall synthesis","type":"broad"},{"name":"up-regulation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"up-regulation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"up-regulation of secondary cell wall anabolism","type":"broad"},{"name":"up-regulation of secondary cell wall biogenesis","type":"exact"},{"name":"up-regulation of secondary cell wall biosynthetic process","type":"broad"},{"name":"up-regulation of secondary cell wall formation","type":"broad"},{"name":"up-regulation of secondary cell wall synthesis","type":"broad"},{"name":"upregulation of cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"upregulation of plant-type secondary cell wall biogenesis","type":"exact"},{"name":"upregulation of secondary cell wall anabolism","type":"broad"},{"name":"upregulation of secondary cell wall biogenesis","type":"exact"},{"name":"upregulation of secondary cell wall biosynthetic process","type":"broad"},{"name":"upregulation of secondary cell wall formation","type":"broad"},{"name":"upregulation of secondary cell wall synthesis","type":"broad"}],"termid":"GO:1901348"}


id: GO:0045743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fibroblast growth factor receptor signaling pathway activity.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor receptor signaling pathway","termid":"GO:0040036"},{"relation_name":"positively_regulates","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of fibroblast growth factor receptor signaling pathway","synonyms":[{"name":"activation of fibroblast growth factor receptor signaling pathway","type":"narrow"},{"name":"positive regulation of FGF receptor signaling pathway","type":"exact"},{"name":"positive regulation of FGF receptor signalling pathway","type":"exact"},{"name":"positive regulation of FGFR signaling pathway","type":"exact"},{"name":"stimulation of fibroblast growth factor receptor signaling pathway","type":"narrow"},{"name":"up regulation of fibroblast growth factor receptor signaling pathway","type":"exact"},{"name":"up-regulation of fibroblast growth factor receptor signaling pathway","type":"exact"},{"name":"upregulation of fibroblast growth factor receptor signaling pathway","type":"exact"}],"termid":"GO:0045743"}


id: PBO:0001598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit Emc1 (predicted)","termid":"PBO:0001598"}


id: SO:0000265
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a lysine anticodon, and a 3' lysine binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"lysine_tRNA_primary_transcript","termid":"SO:0000222"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl_tRNA","synonyms":[{"name":"lysyl tRNA","type":"exact"},{"name":"lysyl-transfer RNA","type":"exact"},{"name":"lysyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000265"}


id: PBO:0036520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Ipi1","termid":"PBO:0036520"}


id: GO:0018534
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nitrilotriacetate + OH- = H+ + 2 e- + glyoxylate + iminodiacetate.","definition_xrefs":["UM-BBD_reactionID:r0588"],"gene_count":0,"genotype_count":0,"name":"obsolete nitrilotriacetate dehydrogenase activity (obsolete GO:0018534)","termid":"GO:0018534"}


id: PBO:0058821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7978","termid":"PBO:0058821"}


id: GO:0044427
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a chromosome, a structure composed of a very long molecule of DNA and associated proteins (e.g. histones) that carries hereditary information.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete chromosomal part (obsolete GO:0044427)","synonyms":[{"name":"chromosomal component","type":"exact"},{"name":"chromosome component","type":"exact"},{"name":"chromosome part","type":"exact"}],"termid":"GO:0044427"}


id: FYPO:0000221
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which the transcription of specific genes is regulated in response to the loss of mitochondrial DNA.","definition_xrefs":["PomBase:mah","PMID:17868468"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription regulation phenotype, adaptive response to loss of mtDNA (obsolete FYPO:0000221)","synonyms":[{"name":"adaptive expression responses","type":"exact"},{"name":"fission yeast transcription regulation phenotype, adaptive response to loss of mtDNA","type":"exact"},{"name":"transcription regulation phenotype, adaptive response to loss of mtDNA during mitotic cell cycle","type":"related"},{"name":"transcription regulation phenotype, adaptive response to loss of mtDNA during vegetative growth","type":"exact"}],"termid":"FYPO:0000221"}


id: PBO:0052130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily G member 2","termid":"PBO:0052130"}


id: GO:2001125
data:
  {"annotated_genes":["SJAG_05000"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95511],"is_not":false,"summary":null,"term":"GO:2001125"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of translational frameshifting.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational elongation","termid":"GO:0045900"},{"relation_name":"is_a","term_name":"regulation of translational frameshifting","termid":"GO:2001124"},{"relation_name":"negatively_regulates","term_name":"translational frameshifting","termid":"GO:0006452"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of translational frameshifting","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2001125","terms_by_termid":{"GO:2001125":null}}


id: GO:0015021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the elimination of sulfate; appears to act on linkages between N-acetyl-D-glucosamine and uronate. Product is an unsaturated sugar.","definition_xrefs":["EC:4.2.2.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"heparin-sulfate lyase activity","secondary_identifiers":["MetaCyc:4.2.2.8-RXN"],"synonyms":[{"name":"[heparan sulfate]-sulfate lyase activity","type":"related"},{"name":"heparin-sulfate eliminase activity","type":"related"},{"name":"heparin-sulphate lyase activity","type":"exact"},{"name":"heparitin-sulfate lyase activity","type":"exact"},{"name":"heparitinase I","type":"related"},{"name":"heparitinase II","type":"related"}],"termid":"GO:0015021"}


id: PBO:0039231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKT interacting protein","termid":"PBO:0039231"}


id: PBO:0038862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with dual PH domains 2","termid":"PBO:0038862"}


id: PBO:0048742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-ammonia ligase pseudogene 4","termid":"PBO:0048742"}


id: GO:0099151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynaptic density assembly, the aggregation, arrangement and bonding together of a set of components to form a postsynaptic density.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of postsynaptic specialization assembly","termid":"GO:0099150"},{"relation_name":"is_a","term_name":"regulation of excitatory synapse assembly","termid":"GO:1904889"},{"relation_name":"is_a","term_name":"regulation of postsynaptic density organization","termid":"GO:1905874"},{"relation_name":"regulates","term_name":"postsynaptic density assembly","termid":"GO:0097107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of postsynaptic density assembly","termid":"GO:0099151"}


id: PBO:0047948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, distamycin A type, rare, fra(16)(p12.1)","termid":"PBO:0047948"}


id: _global:regulates_o_has_agent
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A relationship between the regulation of a process and the agent that executes that process.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_o_has_agent","secondary_identifiers":["GOREL:0001011"],"synonyms":[{"name":"regulates_o_has_agent","type":"exact"}],"termid":"_global:regulates_o_has_agent"}


id: PBO:0073026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stimulator of chondrogenesis 1","termid":"PBO:0073026"}


id: PBO:0079200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSPY like 4","termid":"PBO:0079200"}


id: GO:0042795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of small nuclear RNA (snRNA) from a DNA template by RNA Polymerase II (Pol II), originating at a Pol II promoter.","definition_xrefs":["ISBN:0321000382","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription by RNA polymerase II","termid":"GO:0006366"},{"relation_name":"is_a","term_name":"snRNA transcription","termid":"GO:0009301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0016073","GO:0010467"],"is_obsolete":false,"name":"snRNA transcription by RNA polymerase II","synonyms":[{"name":"snRNA transcription from Pol II promoter","type":"exact"},{"name":"snRNA transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0042795"}


id: FYPO:0005654
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more iron assimilation RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Iron assimilation RNAs are transcribed from genes whose products are involved in any process in which iron is solubilized and transported into a cell.","definition_xrefs":["PMID:25806539","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of iron assimilation gene mRNA during vegetative growth","synonyms":[{"name":"decreased iron assimilation gene mRNA accumulation during vegetative growth","type":"related"},{"name":"decreased level of iron assimilation gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of iron assimilation gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of iron assimilation gene transcripts during vegetative growth","type":"exact"},{"name":"reduced level of iron assimilation gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0005654"}


id: PBO:0085247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidylprolyl-cis/trans-isomerase (PPIase); specific for phosphorylated S/T residues N-terminal to proline; regulates phosphorylation of RNAPII large subunit (Rpo21p) C-terminal domain (CTD) at Ser7; associates with phospho-Ser5 form of RNAPII in vivo; present along entire coding length of genes; represses initiation of CUTs; required for efficient termination of mRNA transcription, trimethylation of histone H3; human ortholog PIN1 can complement yeast null and ts mutants","termid":"PBO:0085247"}


id: GO:0019019
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A segmented viral genome consisting of three sub-genomic nucleic acids but each nucleic acid is packaged into a different virion.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete tripartite viral genome (obsolete GO:0019019)","termid":"GO:0019019"}


id: PBO:0057414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548o-2","termid":"PBO:0057414"}


id: PBO:0005845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinephosphate cytidylyltransferase (predicted)","termid":"PBO:0005845"}


id: PBO:0057231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 410","termid":"PBO:0057231"}


id: _global:phosphorylates
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"molecularly_interacts_with","termid":"_global:molecularly_interacts_with"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylates","secondary_identifiers":["RO:0002447"],"termid":"_global:phosphorylates"}


id: GO:0046981
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of N-acetylglucosamine (GlcNAc) in a beta-1,3 linkage to the mannose(beta-1,4)Glc disaccharide core of glycolipids.","definition_xrefs":["PMID:12130631","PMID:12130651","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"beta-1,4-mannosylglycolipid beta-1,3-N-acetylglucosaminyltransferase activity","synonyms":[{"name":"UDP-N-acetylglucosamine:beta-D-mannosyl-glycolipid beta-1,3-N-acetylglucosaminyltransferase activity","type":"exact"}],"termid":"GO:0046981"}


id: PBO:0077583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomodulin 2","termid":"PBO:0077583"}


id: PBO:0043532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cochlin","termid":"PBO:0043532"}


id: GO:0019471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 4-hydroxyproline, C5H9NO3, a derivative of the amino acid proline. The presence of hydroxyproline is essential to produce stable triple helical tropocollagen, hence the problems caused by ascorbate deficiency in scurvy. This unusual amino acid is also present in considerable amounts in the major glycoprotein of primary plant cell walls.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"4-hydroxyproline metabolic process","synonyms":[{"name":"4-hydroxyproline metabolism","type":"exact"}],"termid":"GO:0019471"}


id: PBO:0036350
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.1.181","termid":"PBO:0036350"}


id: GO:0032937
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the association of sterol regulatory element binding protein (SREBP), SREBP-cleavage-activating protein (SCAP), and an Insig protein (Insig-1 or Insig-2) in the ER membrane.","definition_xrefs":["PMID:12923525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005783","GO:0005789","GO:0005575"],"is_obsolete":false,"name":"SREBP-SCAP-Insig complex","termid":"GO:0032937"}


id: GO:1902544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA N-glycosylase activity.","definition_xrefs":["GOC:TermGenie","PMID:15518571","GOC:rph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA N-glycosylase activity (obsolete GO:1902544)","synonyms":[{"name":"regulation of DNA glycosylase activity","type":"exact"},{"name":"regulation of endonuclease VIII activity","type":"related"}],"termid":"GO:1902544"}


id: PBO:0056748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 4, N6-adenosine","termid":"PBO:0056748"}


id: PBO:0077762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM20 pseudogene 4","termid":"PBO:0077762"}


id: PBO:0058022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3972","termid":"PBO:0058022"}


id: GO:0006996
data:
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id: PBO:0086922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pyridoxal-5'-phosphate synthase; involved in thiamine and pyridoxine biosynthesis; member of a stationary phase-induced gene family where transcriptional induction precedes the diauxic shift; induced in the absence of thiamine in a Thi2/3p-dependent manner and repressed in its presence; forms a co-regulated gene pair with SNO3; paralog of SNZ1 and SNZ2","termid":"PBO:0086922"}


id: PBO:0053575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 596","termid":"PBO:0053575"}


id: PBO:0088714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate transmembrane transporter family","termid":"PBO:0088714"}


id: PBO:0077669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 14","termid":"PBO:0077669"}


id: PBO:0088220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLLLP motif protein","termid":"PBO:0088220"}


id: PBO:0040271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atrophin 1","termid":"PBO:0040271"}


id: PBO:0071573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35 pseudogene 2","termid":"PBO:0071573"}


id: PBO:0061775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obscurin like cytoskeletal adaptor 1","termid":"PBO:0061775"}


id: PBO:0000018
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protease_activator","termid":"PBO:0000018"}


id: GO:0051294
data:
  {"annotated_genes":["SJAG_02737","SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113035,93051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000132"}]},"cv_name":"biological_process","definition":"Any process that set the alignment of spindle relative to other cellular structures.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of spindle localization","termid":"GO:0051293"},{"relation_name":"part_of","term_name":"establishment of cell polarity","termid":"GO:0030010"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02695":null,"SJAG_02737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007010","GO:0007049","GO:0007163","GO:0000226","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of spindle orientation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"orienting of spindle","type":"exact"},{"name":"spindle orientation","type":"exact"}],"termid":"GO:0051294","terms_by_termid":{"GO:0000132":null}}


id: PBO:0052133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily H member 1","termid":"PBO:0052133"}


id: FYPO:0007879
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation does not occur during a cellular response to methyl methanesulfonate. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["GO:0030163","PMID:34608864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein degradation during vegetative growth","termid":"FYPO:0000845"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"abolished protein degradation during cellular response to methyl methanesulfonate","synonyms":[{"name":"abolished protein breakdown during cellular response to methyl methanesulfonate","type":"exact"},{"name":"abolished protein catabolic process during cellular response to methyl methanesulfonate","type":"exact"},{"name":"abolished protein catabolism during cellular response to methyl methanesulfonate","type":"exact"},{"name":"abolished protein degradation during cellular response to MMS","type":"exact"},{"name":"abolished protein degradation during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"abolished protein degradation during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"protein degradation during cellular response to methyl methanesulfonate abolished","type":"exact"}],"termid":"FYPO:0007879"}


id: GO:1904101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acadesine stimulus.","definition_xrefs":["GOC:TermGenie","GOC:mr","PMID:20802119","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to acadesine","termid":"GO:1904101"}


id: FYPO:0000181
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A DNA recombination phenotype observed in the vegetative growth phase of the life cycle in which reciprocal DNA recombination does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination during vegetative growth","termid":"FYPO:0001345"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000293"],"is_obsolete":false,"name":"abolished crossover","synonyms":[{"name":"DNA recombination defects, crossover, abolished","type":"exact"},{"name":"abolished crossover during mitotic cell cycle","type":"related"},{"name":"crossover abolished","type":"exact"},{"name":"crossover abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0000181"}


id: GO:0099574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates synaptic transmission by regulating protein degradation at the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"is_a","term_name":"regulation protein catabolic process at synapse","termid":"GO:0140250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of protein catabolic process at synapse, modulating synaptic transmission","termid":"GO:0099574"}


id: PBO:0028498
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_ribosome_binding","termid":"PBO:0028498"}


id: PBO:0051089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 1P (pseudogene)","termid":"PBO:0051089"}


id: GO:1990648
data:
  {"annotated_genes":["SJAG_00063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104372],"is_not":false,"summary":null,"term":"GO:1990648"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 4,5,6-trisphosphate + H2O = 1D-myo-inositol 4,6-bisphosphate + phosphate.","definition_xrefs":["PMID:15316017","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate phosphatase activity","termid":"GO:0046030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"inositol-4,5,6-triphosphate 5-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990648","terms_by_termid":{"GO:1990648":null}}


id: PBO:0056224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member D4B","termid":"PBO:0056224"}


id: PR:Q9P3V7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1348.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3V7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0742 protein C1348.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1348.03","synonyms":[{"name":"Spom972h-SPBC1348.03","type":"exact"}],"termid":"PR:Q9P3V7"}


id: GO:1900602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of endocrocin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"endocrocin metabolic process","termid":"GO:1900600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"endocrocin biosynthetic process","synonyms":[{"name":"endocrocin anabolism","type":"exact"},{"name":"endocrocin biosynthesis","type":"exact"},{"name":"endocrocin formation","type":"exact"},{"name":"endocrocin synthesis","type":"exact"}],"termid":"GO:1900602"}


id: GO:0141123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption of the skin of another organism, leading to damage or temporary subversion of the skin.","definition_xrefs":["PMID:28194160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of tissue in another organism","termid":"GO:0141062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dermonecrosis in another organism","termid":"GO:0141123"}


id: PR:Q9C0Y5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0Y5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-binding cassette transporter pdr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB24D3.09c","synonyms":[{"name":"ABC transporter pdr1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pdr1","type":"exact"}],"termid":"PR:Q9C0Y5"}


id: PBO:0027025
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_binding_at_histone_promoter","termid":"PBO:0027025"}


id: PBO:0018015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHREC complex subunit Clr1","termid":"PBO:0018015"}


id: PBO:0076526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 39","termid":"PBO:0076526"}


id: PBO:0018183
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae HMG2 catalytic domain","termid":"PBO:0018183"}


id: FYPO:0004919
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which regulation of a molecular function is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal regulation of molecular function","synonyms":[{"name":"normal regulation of molecular function during mitotic cell cycle","type":"related"},{"name":"normal regulation of molecular function during vegetative growth","type":"exact"}],"termid":"FYPO:0004919"}


id: GO:0102509
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanin betaine + H2O = cyanidin 3-O-beta-D-glucoside betaine + beta-D-glucose.","definition_xrefs":["GOC:pz","EC:3.2.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"cyanidin 3,5-diglucoside glucosidase activity","secondary_identifiers":["MetaCyc:RXN-14436"],"termid":"GO:0102509"}


id: GO:0048826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the cotyledon are generated and organized. The cotyledon is the modified leaf (seed leaf), found as part of the embryo in plant seeds. It is involved in either storage or absorption of food reserves. Dicotyledonous seeds contain two cotyledons, while monocotyledonous seeds contain only one. The cotyledons may appear above ground and show photosynthetic activity in the seedling.","definition_xrefs":["GOC:devbiol","GOC:tb","PO:0020030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leaf morphogenesis","termid":"GO:0009965"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"part_of","term_name":"cotyledon development","termid":"GO:0048825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cotyledon morphogenesis","termid":"GO:0048826"}


id: PBO:0057843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3156-3","termid":"PBO:0057843"}


id: FYPO:0005599
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of the first meiotic nuclear division is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis I","termid":"FYPO:0003603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of meiosis I","synonyms":[{"name":"delayed meiosis I progression","type":"related"},{"name":"increased duration of first meiotic nuclear division","type":"exact"},{"name":"increased duration of meiosis I progression","type":"exact"},{"name":"prolonged meiosis I","type":"exact"}],"termid":"FYPO:0005599"}


id: PBO:0091814
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIR ANtagonist","termid":"PBO:0091814"}


id: GO:0034738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + lanosterol = CoA + lanosterol ester.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol O-acyltransferase activity","termid":"GO:0004772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"lanosterol O-acyltransferase activity","termid":"GO:0034738"}


id: GO:0033309
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds to the Swi4/6 cell cycle box (SCB) promoter element, consensus sequence CRCGAAA, and activates transcription during the G1/S transition of the cell cycle. In Saccharomyces, the complex contains a heterodimer of the DNA binding protein Swi4p and the activator Swi6p, and is associated with additional proteins known as Whi5p and Msa1p.","definition_xrefs":["PMID:19150335","PMID:11206552","PMID:7917338","PMID:15838511","PMID:18160399","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SBF transcription complex","synonyms":[{"name":"SBF complex","type":"exact"}],"termid":"GO:0033309"}


id: PBO:0071014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 16","termid":"PBO:0071014"}


id: GO:0019296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving coenzyme M (2-thioethansulfonate), a coenzyme involved in the utilization of methane by methanogenic prokaryotes.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid metabolic process","termid":"GO:0006082"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"coenzyme M metabolic process","synonyms":[{"name":"coenzyme M metabolism","type":"exact"}],"termid":"GO:0019296"}


id: GO:0001010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The function of binding to a specific DNA sequence and recruiting another transcription factor to the DNA in order to modulate transcription. The recruited factor may bind DNA directly, or may be colocalized via protein-protein interactions.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0030674"],"is_obsolete":false,"name":"RNA polymerase II sequence-specific DNA-binding transcription factor recruiting activity","synonyms":[{"name":"sequence-specific DNA binding transcription factor recruiting transcription factor activity","type":"exact"},{"name":"transcription factor activity, sequence-specific DNA binding transcription factor recruiting","type":"exact"},{"name":"transcription factor activity, sequence-specific DNA-binding transcription factor recruiting","type":"related"}],"termid":"GO:0001010"}


id: PBO:0089123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome base subcomplex ATPase subunit Rpt5","termid":"PBO:0089123"}


id: PBO:0077182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 6","termid":"PBO:0077182"}


id: SO:0001453
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A negatively charged, hydorophilic amino acid encoded by the codons GAT and GAC.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartic_acid","synonyms":[{"name":"Asp","type":"exact"},{"name":"D","type":"exact"},{"name":"aspartic acid","type":"exact"}],"termid":"SO:0001453"}


id: PBO:0071233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 74","termid":"PBO:0071233"}


id: PBO:0078361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 6-1","termid":"PBO:0078361"}


id: PBO:0068429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, ribosomal 45S cluster 4","termid":"PBO:0068429"}


id: GO:0002421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"B cell antigen processing and presentation which is initiated by uptake of antigen via pinocytosis.","definition_xrefs":["PMID:7543530","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell antigen processing and presentation","termid":"GO:0002450"},{"relation_name":"is_a","term_name":"antigen processing and presentation following pinocytosis","termid":"GO:0002746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell antigen processing and presentation following pinocytosis","synonyms":[{"name":"B lymphocyte antigen processing and presentation following pinocytosis","type":"exact"},{"name":"B-cell antigen processing and presentation following pinocytosis","type":"exact"},{"name":"B-lymphocyte antigen processing and presentation following pinocytosis","type":"exact"}],"termid":"GO:0002421"}


id: GO:0097287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the Q nucleoside precursor 7-cyano-7-deazaguanine, also known as 2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile or preQo.","definition_xrefs":["GOC:yaf","PMID:364423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrile metabolic process","termid":"GO:0050898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"7-cyano-7-deazaguanine metabolic process","synonyms":[{"name":"7-cyano-7-deazaguanine metabolism","type":"exact"}],"termid":"GO:0097287"}


id: PBO:0028391
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glyoxalase_III_activity","termid":"PBO:0028391"}


id: GO:0047280
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diphosphate + nicotinamide mononucleotide = 5-phospho-alpha-D-ribose 1-diphosphate + H+ + nicotinamide.","definition_xrefs":["RHEA:16149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"nicotinamide phosphoribosyltransferase activity","secondary_identifiers":["EC:2.4.2.12","MetaCyc:2.4.2.12-RXN","KEGG_REACTION:R01271","Reactome:R-HSA-197250"],"synonyms":[{"name":"NMN diphosphorylase activity","type":"related"},{"name":"NMN pyrophosphorylase activity","type":"related"},{"name":"NMN synthetase activity","type":"related"},{"name":"nicotinamide mononucleotide pyrophosphorylase activity","type":"related"},{"name":"nicotinamide mononucleotide synthetase activity","type":"related"},{"name":"nicotinamide-nucleotide:diphosphate phospho-alpha-D-ribosyltransferase activity","type":"related"}],"termid":"GO:0047280"}


id: MOD:00802
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"a protein modification that effectively converts an L-histidine residue to L-histidino vanadium tetraoxide","definition_xrefs":["RESID:AA0395","PubMed:16494433","PubMed:10543953","PubMed:8552646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vanadium containing modified residue","termid":"MOD:00772"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-histidino vanadium tetraoxide","synonyms":[{"name":"(4-[(2S)-2-amino-2-carboxyethyl]-1H-imidazol-1-yl) (dihydroxy)dioxovanadium","type":"exact"},{"name":"1'-vanadato-L-histidine","type":"exact"},{"name":"L-histidino vanadium tetraoxide","type":"exact"},{"name":"N(tau)-vanadatohistidine","type":"exact"},{"name":"NtauH2VO4His","type":"exact"},{"name":"bromoperoxidase vanadium cofactor","type":"exact"},{"name":"chloroperoxidase vanadium cofactor","type":"exact"},{"name":"dihydrogen (4-[(2S)-2-amino-2-carboxyethyl]-1H-imidazol-1-yl) (tetraoxido)vanadate","type":"exact"},{"name":"haloperoxidase vanadium cofactor","type":"exact"},{"name":"histidine-1-vanadate","type":"exact"},{"name":"histidine-N(epsilon)-vanadate","type":"exact"},{"name":"histidine-N1'-vanadate","type":"exact"},{"name":"tele-vanadatohistidine","type":"exact"}],"termid":"MOD:00802"}


id: GO:0033369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to a location within a secretory granule in a mast cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"part_of","term_name":"protein localization to mast cell secretory granule","termid":"GO:0033367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"establishment of protein localization to mast cell secretory granule","synonyms":[{"name":"establishment of protein localisation in mast cell secretory granule","type":"exact"},{"name":"establishment of protein localization in mast cell secretory granule","type":"exact"}],"termid":"GO:0033369"}


id: PBO:0081624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 554","termid":"PBO:0081624"}


id: PBO:0078068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 58 (non-functional)","termid":"PBO:0078068"}


id: PBO:0084352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Late endosomal protein involved in late endosome to vacuole transport; functional homolog of human obesity receptor gene-related protein (OB-RGRP)","termid":"PBO:0084352"}


id: GO:0106321
data:
  {"annotated_genes":["SJAG_01457"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99559],"is_not":false,"summary":null,"term":"GO:0106321"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-(hydroxymethyl)glutathione + NADP+ = S-formylglutathione + NADPH + H+.","definition_xrefs":["RHEA:19981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity","termid":"GO:0051903"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"S-(hydroxymethyl)glutathione dehydrogenase (NADP+) activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106321","terms_by_termid":{"GO:0106321":null}}


id: GO:0034546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4-dichloroaniline + 2 H+ + 2 e- = 4-chloroaniline + HCl.","definition_xrefs":["UM-BBD_reactionID:r0819"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4-dichloroaniline reductive dehalogenase activity (obsolete GO:0034546)","termid":"GO:0034546"}


id: GO:0018898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2,4-dichlorobenzoate, a chlorinated aromatic compound which is a key intermediate in the aerobic degradation of polychlorinated biphenyls (PCBs).","definition_xrefs":["GOC:jl","UM-BBD_pathwayID:dcb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"2,4-dichlorobenzoate metabolic process","synonyms":[{"name":"2,4-dichlorobenzoate metabolism","type":"exact"}],"termid":"GO:0018898"}


id: GO:0008348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an antimicrobial humoral response.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antimicrobial humoral response","termid":"GO:0002759"},{"relation_name":"is_a","term_name":"negative regulation of response to biotic stimulus","termid":"GO:0002832"},{"relation_name":"is_a","term_name":"negative regulation of humoral immune response","termid":"GO:0002921"},{"relation_name":"is_a","term_name":"negative regulation of defense response","termid":"GO:0031348"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"negatively_regulates","term_name":"antimicrobial humoral response","termid":"GO:0019730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antimicrobial humoral response","secondary_identifiers":["GO:0042154","GO:0042155"],"synonyms":[{"name":"attenuation of antimicrobial humoral response","type":"exact"},{"name":"down regulation of antimicrobial humoral response","type":"exact"},{"name":"down-regulation of antimicrobial humoral response","type":"exact"},{"name":"downregulation of antimicrobial humoral response","type":"exact"},{"name":"inhibition of antimicrobial humoral response","type":"narrow"}],"termid":"GO:0008348"}


id: PBO:0003037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transporter Aat1 (predicted)","termid":"PBO:0003037"}


id: PBO:0090771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 adaptor complex beta subunit Apl2","termid":"PBO:0090771"}


id: FYPO:0009084
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of lithium chloride and methyl methanesulfonate. Cells stop growing (and may die) at concentrations of lithium chloride and methyl methanesulfonate that allow wild type cells to grow.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to lithium chloride and methyl methanesulfonate","synonyms":[{"name":"hypersensitive to lithium chloride and MMS","type":"exact"},{"name":"hypersensitive to lithium chloride and methyl methanesulfonate","type":"exact"},{"name":"sensitive to lithium chloride and MMS","type":"exact"},{"name":"sensitive to lithium chloride and MMS during vegetative growth","type":"exact"},{"name":"sensitive to lithium chloride and MMS in combination","type":"exact"},{"name":"sensitive to lithium chloride and methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"sensitive to lithium chloride and methyl methanesulfonate in combination","type":"exact"}],"termid":"FYPO:0009084"}


id: PBO:0087438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit f of the F0 sector of mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis","termid":"PBO:0087438"}


id: FYPO:0002017
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the mitotic cell cycle is arrested during G2 phase, before new end take-off (NETO) has occurred, under conditions where arrest does not normally occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abolished NETO","termid":"FYPO:0001018"},{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic interphase","termid":"FYPO:0001028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell cycle arrest in mitotic interphase before NETO","synonyms":[{"name":"abnormal cell cycle arrest in interphase before NETO during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic interphase before NETO during vegetative growth","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic interphase before activation of bipolar cell growth","type":"related"},{"name":"abnormal cell cycle arrest in mitotic interphase before cell growth mode switching, monopolar to bipolar","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic interphase before new end take-off","type":"related"},{"name":"abnormal cell cycle arrest in mitotic interphase before switch from monopolar to bipolar cell growth","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in interphase before NETO","type":"exact"},{"name":"cell cycle arrest in mitotic interphase before NETO","type":"broad"}],"termid":"FYPO:0002017"}


id: PBO:0073420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seizure related 6 homolog like","termid":"PBO:0073420"}


id: PBO:0040604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAGE family member 2, pseudogene","termid":"PBO:0040604"}


id: GO:0102807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + cyanidin 3-O-beta-D-glucoside betaine = cyanidin 3-O-sophoroside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanidin 3-O-glucoside 2''-O-glucosyltransferase activity (obsolete GO:0102807)","termid":"GO:0102807"}


id: PBO:0077540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM252 divergent transcript","termid":"PBO:0077540"}


id: PBO:0059076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdenum cofactor synthesis 3 pseudogene 2","termid":"PBO:0059076"}


id: GO:0047587
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5alpha-ergosta-7,22-diene-3beta,5-diol = ergosterol + H2O.","definition_xrefs":["RHEA:22064","EC:4.2.1.62"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"5-alpha-hydroxysteroid dehydratase activity","secondary_identifiers":["MetaCyc:5-ALPHA-HYDROXYSTEROID-DEHYDRATASE-RXN","KEGG_REACTION:R03675"],"synonyms":[{"name":"5alpha-ergosta-7,22-diene-3beta,5-diol 5,6-hydro-lyase (ergosterol-forming)","type":"related"},{"name":"5alpha-ergosta-7,22-diene-3beta,5-diol 5,6-hydro-lyase activity","type":"related"},{"name":"5alpha-hydroxysteroid dehydratase activity","type":"related"}],"termid":"GO:0047587"}


id: GO:0061945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of protein K-48-linked ubiquitination, a protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 48 of the ubiquitin monomers, is added to a protein. K48-linked ubiquitination targets the substrate protein for degradation.","definition_xrefs":["PMID:23460740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein polyubiquitination","termid":"GO:1902914"},{"relation_name":"regulates","term_name":"protein K48-linked ubiquitination","termid":"GO:0070936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"regulation of protein K48-linked ubiquitination","termid":"GO:0061945"}


id: PBO:0016973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR90","termid":"PBO:0016973"}


id: GO:0071294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a zinc ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to zinc ion","termid":"GO:0010043"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to zinc ion","synonyms":[{"name":"cellular response to zinc","type":"exact"}],"termid":"GO:0071294"}


id: PBO:0002023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family ATPase Dmc1","termid":"PBO:0002023"}


id: GO:1905140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apical ectodermal ridge formation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:18359901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"apical ectodermal ridge formation","termid":"GO:1905139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of apical ectodermal ridge formation","synonyms":[{"name":"regulation of AER formation","type":"related"},{"name":"regulation of apical epidermal ridge formation","type":"exact"},{"name":"regulation of crista ectodermalis apicalis formation","type":"related"}],"termid":"GO:1905140"}


id: PBO:0003478
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human MRRF","termid":"PBO:0003478"}


id: GO:0019025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A single stranded RNA genome with the same nucleotide polarity as mRNA.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete positive sense viral genome (obsolete GO:0019025)","termid":"GO:0019025"}


id: PBO:0074662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 50B","termid":"PBO:0074662"}


id: FYPO:0001813
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to N-methyl-N'-nitro-N-nitrosoguanidine. Cells stop growing (and may die) at a concentration of N-methyl-N'-nitro-N-nitrosoguanidine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to N-methyl-N'-nitro-N-nitrosoguanidine","synonyms":[{"name":"hypersensitive to N-methyl-N'-nitro-N-nitrosoguanidine","type":"exact"},{"name":"sensitive to MNNG","type":"exact"},{"name":"sensitive to N-methyl-N'-nitro-N-nitrosoguanidine during mitotic cell cycle","type":"related"},{"name":"sensitive to N-methyl-N'-nitro-N-nitrosoguanidine during vegetative growth","type":"exact"},{"name":"sensitive to nitrosoguanidine","type":"exact"}],"termid":"FYPO:0001813"}


id: PBO:0059485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine sulfoxide reductase B1","termid":"PBO:0059485"}


id: PBO:0048434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,4-alpha-glucan branching enzyme 1","termid":"PBO:0048434"}


id: GO:0046331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling between cells of equivalent developmental potential that results in these cells adopting different developmental fates. An example is the suppression by cells with a particular fate of the adoption of the same fate by surrounding cells.","definition_xrefs":["GOC:kmv","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in cell fate commitment","termid":"GO:0045168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"lateral inhibition","termid":"GO:0046331"}


id: GO:0016495
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a C-X3-C chemokine and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. A C-X3-C chemokine has three amino acids between the first two cysteines of the characteristic four-cysteine motif.","definition_xrefs":["GOC:signaling","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine receptor activity","termid":"GO:0004950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"C-X3-C chemokine receptor activity","termid":"GO:0016495"}


id: GO:0030160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that provides a physical support bridging a synaptic signaling receptor and a downstream signaling molecule.","definition_xrefs":["PMID:10506216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor complex adaptor activity","termid":"GO:0030159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030674","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"synaptic receptor adaptor activity","synonyms":[{"name":"GKAP/Homer scaffold activity","type":"narrow"},{"name":"GKAP/Homer scaffold protein","type":"narrow"},{"name":"postsynaptic density scaffold protein","type":"narrow"}],"termid":"GO:0030160"}


id: FYPO:0007510
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is abnormally arrested at the mitotic G2/M phase transition in the absence of the mitotic DNA replication checkpoint. The previous S phase is completed, no replication intermediates can be observed, and cells do not undergo rereplication.","definition_xrefs":["PomBase:jh","PMID:17690116","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0000400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"cell cycle arrest at mitotic G2/M phase transition in absence of mitotic DNA replication checkpoint","synonyms":[{"name":"cell cycle arrest at G2/M phase transition in absence of mitotic DNA replication checkpoint during mitotic cell cycle","type":"exact"},{"name":"cell cycle arrest at mitotic G2/M phase transition in absence of mitotic DNA replication checkpoint during vegetative growth","type":"exact"},{"name":"mitotic cell cycle arrest at the G2/M transition with completed S phase","type":"related"}],"termid":"FYPO:0007510"}


id: GO:0009555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pollen grain over time, from its formation to the mature structure. The process begins with the meiosis of the microsporocyte to form four haploid microspores. The nucleus of each microspore then divides by mitosis to form a two-celled organism, the pollen grain, that contains a tube cell as well as a smaller generative cell. The pollen grain is surrounded by an elaborate cell wall. In some species, the generative cell immediately divides again to give a pair of sperm cells. In most flowering plants, however this division takes place later, in the tube that develops when a pollen grain germinates.","definition_xrefs":["GOC:tb","GOC:mtg_plant","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gametophyte development","termid":"GO:0048229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen development","secondary_identifiers":["GO:0009564","GO:0048231"],"synonyms":[{"name":"formation of generative and vegetative cells","type":"exact"},{"name":"male gametophyte development","type":"exact"},{"name":"male gametophyte formation","type":"exact"},{"name":"microgametophyte development","type":"exact"},{"name":"pollen grain formation","type":"exact"}],"termid":"GO:0009555"}


id: PBO:0064834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 11","termid":"PBO:0064834"}


id: PBO:0029388
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_nucleoplasm","termid":"PBO:0029388"}


id: PBO:0045030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIS3 like 3'-5' exoribonuclease 2","termid":"PBO:0045030"}


id: GO:0140483
data:
  {"annotated_genes":["SJAG_00794","SJAG_04076","SJAG_03217","SJAG_04884","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91384,98516,101545,105978,109873],"is_not":false,"summary":null,"term":"GO:0140483"}]},"cv_name":"molecular_function","definition":"The binding activity of a protein that brings the kinetochore and another molecule into contact, permitting those molecules to function in a coordinated way.","definition_xrefs":["PMID:22521786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00794":null,"SJAG_03217":null,"SJAG_04076":null,"SJAG_04259":null,"SJAG_04884":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"kinetochore adaptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"inner kinetochore adaptor activity","type":"narrow"},{"name":"outer kinetochore adaptor activity","type":"narrow"}],"termid":"GO:0140483","terms_by_termid":{"GO:0140483":null}}


id: CHEBI:16238
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD","termid":"CHEBI:16238"}


id: _global:has_start_location
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"x 'has starts location' y if and only if there exists some process z such that x 'starts with' z and z 'occurs in' y","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"has_part_that_occurs_in","termid":"_global:has_part_that_occurs_in"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_start_location","secondary_identifiers":["RO:0002231"],"termid":"_global:has_start_location"}


id: PBO:0059696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 4","termid":"PBO:0059696"}


id: GO:1901621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of smoothened signaling pathway involved in dorsal/ventral neural tube patterning.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smoothened signaling pathway","termid":"GO:0045879"},{"relation_name":"is_a","term_name":"regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","termid":"GO:1901620"},{"relation_name":"negatively_regulates","term_name":"smoothened signaling pathway involved in dorsal/ventral neural tube patterning","termid":"GO:0060831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","synonyms":[{"name":"down regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"down regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"down regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"down regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"down-regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"down-regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"down-regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"down-regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"downregulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"downregulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"downregulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"downregulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"inhibition of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"inhibition of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"inhibition of smoothened signaling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"inhibition of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"narrow"},{"name":"negative regulation of hedgehog signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"negative regulation of hh signaling pathway involved in dorsal/ventral neural tube patterning","type":"exact"},{"name":"negative regulation of smoothened signalling pathway involved in dorsal/ventral neural tube patterning","type":"exact"}],"termid":"GO:1901621"}


id: GO:0140844
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of ADP-ribose groups to the glutamate-2 residue of the N-terminal tail of histone H2B (or an equivalent residue).","definition_xrefs":["PMID:27530147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein-glutamate ADP-ribosyltransferase activity","termid":"GO:0140807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"NAD+-histone H2BE2 glutamate ADP-ribosyltransferase activity","synonyms":[{"name":"NAD+-histone H2B-E2 glutamate ADP-ribosyltransferase activity","type":"exact"},{"name":"NAD+-histone-glutamate ADP-ribosyltransferase activity (H2B-E2 specific)","type":"exact"}],"termid":"GO:0140844"}


id: PBO:0065040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELID1 pseudogene 5","termid":"PBO:0065040"}


id: PBO:0050415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNRNPDL pseudogene 4","termid":"PBO:0050415"}


id: PR:Q10236
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonuclease H2 subunit A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00931","PANTHER:PTHR10954:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H2 subunit A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.02","secondary_identifiers":["UniProtKB:Q10236"],"synonyms":[{"name":"RNase H2 subunit A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNase HI large subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RNASEH2A","type":"exact"},{"name":"ribonuclease HI large subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ribonuclease HI subunit A (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10236"}


id: PBO:0042108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 181","termid":"PBO:0042108"}


id: PBO:0044829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 116","termid":"PBO:0044829"}


id: FYPO:0002273
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has abnormal morphology (i.e. size, shape, or structure) and is inviable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal vegetative cell morphology","termid":"FYPO:0001118"},{"relation_name":"is_a","term_name":"inviable cell","termid":"FYPO:0000049"},{"relation_name":"is_a","term_name":"abnormal vegetative cell morphology","termid":"FYPO:0001118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000005","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"inviable vegetative cell with abnormal cell morphology","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"inviable cell with abnormal cell morphology during vegetative growth","type":"exact"},{"name":"inviable vegetative cell with abnormal cell morphology during mitotic cell cycle","type":"related"},{"name":"lethal; vegetative cell with abnormal cell morphology","type":"exact"}],"termid":"FYPO:0002273","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: GO:0038111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-7 binding to its receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-7","termid":"GO:0098761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-7-mediated signaling pathway","synonyms":[{"name":"IL-7-mediated signaling pathway","type":"exact"},{"name":"interleukin-7-mediated signalling pathway","type":"exact"}],"termid":"GO:0038111"}


id: GO:0071144
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of SMAD family proteins, a transcription factor complex which binds to the promoters of target genes and recruits co-activators and histone acetyltransferases, facilitating transcription. Phosphorylation of the non-SMAD4 subunit(s) enables binding of SMAD4 to form heteromeric complexes that enter the nucleus to initiate gene transcription. DNA-binding specificity is conferred by other transcription factors binding to SMAD complexes. Interactions with coactivators or corepressors modulate their transcriptional activity. Can be heterotrimeric or heterodimeric.","definition_xrefs":["PMID:16322555","GOC:bhm","PMID:9670020","PMID:9389648","PMID:11779505","PMID:15350224","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SMAD protein complex","termid":"GO:0071141"},{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"heteromeric SMAD protein complex","secondary_identifiers":["GO:0071145","GO:0071146"],"synonyms":[{"name":"SMAD1-SMAD4 protein complex","type":"narrow"},{"name":"SMAD2-SMAD3-SMAD4 protein complex","type":"narrow"},{"name":"SMAD2-SMAD4 protein complex","type":"narrow"},{"name":"SMAD3-SMAD4 protein complex","type":"narrow"}],"termid":"GO:0071144"}


id: FYPO:0007203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding at an rDNA spacer replication fork barrier by a gene product is decreased, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:18794373","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased double-stranded DNA binding","termid":"FYPO:0005018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000653","FYPO:0000652"],"is_obsolete":false,"name":"decreased rDNA spacer replication fork barrier binding","synonyms":[{"name":"decreased DNA binding at rDNA spacer replication fork barrier","type":"exact"},{"name":"reduced rDNA spacer replication fork barrier binding","type":"exact"}],"termid":"FYPO:0007203"}


id: GO:0030494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a bacteriochlorophyll, any of the chlorophylls of photosynthetic bacteria. They differ structurally from the chlorophylls of higher plants.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorophyll biosynthetic process","termid":"GO:0015995"},{"relation_name":"is_a","term_name":"bacteriochlorophyll metabolic process","termid":"GO:0030493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"bacteriochlorophyll biosynthetic process","synonyms":[{"name":"bacteriochlorophyll anabolism","type":"exact"},{"name":"bacteriochlorophyll biosynthesis","type":"exact"},{"name":"bacteriochlorophyll formation","type":"exact"},{"name":"bacteriochlorophyll synthesis","type":"exact"}],"termid":"GO:0030494"}


id: PBO:0073017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synthesis of cytochrome C oxidase 1","termid":"PBO:0073017"}


id: PBO:0046346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 4","termid":"PBO:0046346"}


id: GO:1901225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of regulation of transcription from RNA polymerase II promoter involved in heart development.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter involved in heart development (obsolete GO:1901225)","synonyms":[{"name":"down regulation of global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"down regulation of global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"down regulation of global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"down regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"down regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"down regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"down regulation of regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"down regulation of regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"down regulation of regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"down regulation of regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"down regulation of regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"down regulation of regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"down regulation of regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"down regulation of regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"down regulation of regulation of transcription from RNA polymerase II promoter involved in heart development","type":"exact"},{"name":"down regulation of regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"down regulation of regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"down regulation of regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"},{"name":"down-regulation of global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"down-regulation of global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"down-regulation of global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"down-regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"down-regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"down-regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"down-regulation of regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"down-regulation of regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"down-regulation of regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"down-regulation of regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"down-regulation of regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"down-regulation of regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"down-regulation of regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"down-regulation of regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"down-regulation of regulation of transcription from RNA polymerase II promoter involved in heart development","type":"exact"},{"name":"down-regulation of regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"down-regulation of regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"down-regulation of regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"},{"name":"downregulation of global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"downregulation of global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"downregulation of global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"downregulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"downregulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"downregulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"downregulation of regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"downregulation of regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"downregulation of regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"downregulation of regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"downregulation of regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"downregulation of regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"downregulation of regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"downregulation of regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"downregulation of regulation of transcription from RNA polymerase II promoter involved in heart development","type":"exact"},{"name":"downregulation of regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"downregulation of regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"downregulation of regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"},{"name":"inhibition of global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"inhibition of global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"inhibition of global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"inhibition of regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"inhibition of regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"inhibition of regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"inhibition of regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"inhibition of regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"inhibition of regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"inhibition of regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"inhibition of regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"inhibition of regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"inhibition of regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"inhibition of regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"inhibition of regulation of transcription from RNA polymerase II promoter involved in heart development","type":"narrow"},{"name":"inhibition of regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"inhibition of regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"inhibition of regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"},{"name":"negative regulation of global transcription regulation from Pol II promoter involved in cardiac development","type":"related"},{"name":"negative regulation of global transcription regulation from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"negative regulation of global transcription regulation from Pol II promoter involved in heart development","type":"related"},{"name":"negative regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"negative regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"related"},{"name":"negative regulation of regulation of gene-specific transcription from RNA polymerase II promoter involved in heart development","type":"related"},{"name":"negative regulation of regulation of global transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"negative regulation of regulation of global transcription from Pol II promoter involved in dorsal vessel development","type":"related"},{"name":"negative regulation of regulation of global transcription from Pol II promoter involved in heart development","type":"related"},{"name":"negative regulation of regulation of transcription from Pol II promoter involved in cardiac development","type":"related"},{"name":"negative regulation of regulation of transcription from Pol II promoter involved in dorsal vessel development","type":"narrow"},{"name":"negative regulation of regulation of transcription from Pol II promoter involved in heart development","type":"exact"},{"name":"negative regulation of regulation of transcription from RNA polymerase II promoter involved in cardiac development","type":"related"},{"name":"negative regulation of regulation of transcription from RNA polymerase II promoter involved in dorsal vessel development","type":"narrow"},{"name":"negative regulation of regulation of transcription from RNA polymerase II promoter, global involved in cardiac development","type":"related"},{"name":"negative regulation of regulation of transcription from RNA polymerase II promoter, global involved in dorsal vessel development","type":"related"},{"name":"negative regulation of regulation of transcription from RNA polymerase II promoter, global involved in heart development","type":"related"},{"name":"negative regulation of transcription from RNA polymerase II promoter involved in heart development","type":"exact"}],"termid":"GO:1901225"}


id: PBO:0017461
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_pathogen","termid":"PBO:0017461"}


id: PBO:0044138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP2 pseudogene 4","termid":"PBO:0044138"}


id: GO:1900861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cordyol C biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"cordyol C biosynthetic process","termid":"GO:1900799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of cordyol C biosynthetic process","termid":"GO:1900861"}


id: PBO:0032709
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_error-free_translesion_synthesis_of_pyrimidine-pyrimidone_6-4_photoproducts","termid":"PBO:0032709"}


id: PBO:0075621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sprouty related EVH1 domain containing 2","termid":"PBO:0075621"}


id: FYPO:0003000
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the assembly of actin filaments from actin monomers does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly","termid":"FYPO:0000336"},{"relation_name":"is_a","term_name":"abolished actin filament organization","termid":"FYPO:0001010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0004803","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished actin filament polymerization","synonyms":[{"name":"abolished actin filament polymerisation","type":"exact"},{"name":"abolished actin filament polymerization during mitotic cell cycle","type":"related"},{"name":"abolished actin filament polymerization during vegetative growth","type":"exact"},{"name":"actin filament polymerization abolished","type":"exact"}],"termid":"FYPO:0003000"}


id: PBO:0070508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 7","termid":"PBO:0070508"}


id: GO:0001696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of gastric acid (hydrochloric acid) by parietal or oxyntic cells during digestion.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system process","termid":"GO:0022600"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"gastric acid secretion","synonyms":[{"name":"hydrochloric acid secretion","type":"narrow"}],"termid":"GO:0001696"}


id: PBO:0065887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB35, member RAS oncogene family","termid":"PBO:0065887"}


id: GO:1903909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor clustering.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:als","PMID:23575248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to membrane","termid":"GO:1905475"},{"relation_name":"regulates","term_name":"receptor clustering","termid":"GO:0043113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of receptor clustering","termid":"GO:1903909"}


id: PBO:0079729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTF like 6 (pseudogene)","termid":"PBO:0079729"}


id: SO:0002274
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Short interspersed elements that originated from tRNAs.","definition_xrefs":["PMID:21673742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SINE_element","termid":"SO:0000206"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA_SINE_retrotransposon","synonyms":[{"name":"RST retrotransposon","type":"exact"},{"name":"tRNA SINE element","type":"exact"},{"name":"tRNA SINE retrotransposon","type":"exact"}],"termid":"SO:0002274"}


id: PBO:0065200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRPF19 pseudogene 1","termid":"PBO:0065200"}


id: GO:0097663
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Dia2 in S. cerevisiae (Pof3 in S. pombe).","definition_xrefs":["PMID:14747994","PMID:15147268","GOC:jd","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SCF-Dia2/Pof3 ubiquitin ligase complex","termid":"GO:0097663"}


id: PR:Q9HE07
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC20H4.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HE07"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C20H4.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20H4.06c","synonyms":[{"name":"Spom972h-SPAC20H4.06c","type":"exact"}],"termid":"PR:Q9HE07"}


id: GO:0150179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidylserine metabolic process.","definition_xrefs":["GOC:aruk","PMID:30074985","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylserine metabolic process","termid":"GO:0150178"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid metabolic process","termid":"GO:1903727"},{"relation_name":"positively_regulates","term_name":"phosphatidylserine metabolic process","termid":"GO:0006658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphatidylserine metabolic process","termid":"GO:0150179"}


id: PBO:0052353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 4C, pseudogene","termid":"PBO:0052353"}


id: FYPO:0005649
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the duration of localization of a protein to the telomere of a chromosome is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of protein localization to telomere","synonyms":[{"name":"increased duration of protein localisation to telomere","type":"exact"},{"name":"increased duration of protein localization to chromosome, telomeric region","type":"exact"},{"name":"increased duration of protein localization to telomere during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to telomere during vegetative growth","type":"exact"},{"name":"increased duration of protein localization to telomeric region","type":"exact"},{"name":"prolonged protein localization to telomere","type":"exact"}],"termid":"FYPO:0005649"}


id: PBO:0011472
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolysis rate of PNPG to glucose is 20.3(mM min-1 ml-2)","termid":"PBO:0011472"}


id: PBO:0004723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate isomerase (predicted)","termid":"PBO:0004723"}


id: GO:0005241
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete inward rectifier channel (obsolete GO:0005241)","synonyms":[{"name":"inward rectifier channel","type":"exact"}],"termid":"GO:0005241"}


id: PBO:0048374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 associated regulator of MAPK1 subtype 2","termid":"PBO:0048374"}


id: GO:0007042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the pH of the lysosomal lumen, measured by the concentration of the hydrogen ion.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar acidification","termid":"GO:0007035"},{"relation_name":"is_a","term_name":"regulation of lysosomal lumen pH","termid":"GO:0035751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lysosomal lumen acidification","synonyms":[{"name":"lysosome pH reduction","type":"exact"}],"termid":"GO:0007042"}


id: PR:O74468
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A siroheme synthase cysG that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen-III C-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.06c","secondary_identifiers":["UniProtKB:O74468"],"synonyms":[{"name":"Spom972h-cysG","type":"exact"}],"termid":"PR:O74468"}


id: PBO:0027875
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_phosphorylation_during_cellular_response_to_UV","termid":"PBO:0027875"}


id: GO:0090371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the directed movement of glycerol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:tb","GOC:jh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"regulates","term_name":"glycerol transmembrane transport","termid":"GO:0015793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"regulation of glycerol transport","termid":"GO:0090371"}


id: PBO:0065266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 27","termid":"PBO:0065266"}


id: PR:000027589
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.2, initiator methionine removed unphosphorylated form in Schizosaccharomyces pombe. Example: UniProtKB:P09988-1, 2-136.","definition_xrefs":["PMID:20929775","PomBase:MAH","PMID:11242054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.2, initiator methionine removed unphosphorylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"Spom-hht2/InitMet-/PhosRes-","type":"exact"}],"termid":"PR:000027589"}


id: FYPO:0005749
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins occurs to a lower extent than normal when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation","termid":"FYPO:0002679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein phosphorylation during glucose starvation","synonyms":[{"name":"decreased protein phosphorylation during glucose depletion","type":"exact"},{"name":"decreased protein phosphorylation during glucose deprivation","type":"exact"},{"name":"decreased protein phosphorylation during glucose limitation","type":"related"},{"name":"reduced protein phosphorylation during glucose starvation","type":"exact"}],"termid":"FYPO:0005749"}


id: PBO:0090603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine-5'-phosphatase","termid":"PBO:0090603"}


id: PBO:0001218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Dhr1 (predicted)","termid":"PBO:0001218"}


id: PBO:0045136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAAF4-CCPG1 readthrough (NMD candidate)","termid":"PBO:0045136"}


id: GO:0106090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell adhesion involved in sprouting angiogenesis.","definition_xrefs":["GOC:rph","GOC:BHF","PMID:24177325","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell adhesion","termid":"GO:0045785"},{"relation_name":"is_a","term_name":"regulation of cell adhesion involved in sprouting angiogenesis","termid":"GO:0106088"},{"relation_name":"positively_regulates","term_name":"cell adhesion involved in sprouting angiogenesis","termid":"GO:0120078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of cell adhesion involved in sprouting angiogenesis","termid":"GO:0106090"}


id: GO:0075054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiont penetration peg formation for entry into host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"modulation by symbiont of entry into host","termid":"GO:0052372"},{"relation_name":"regulates","term_name":"penetration peg formation","termid":"GO:0075053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of penetration peg formation","secondary_identifiers":["GO:0075058"],"synonyms":[{"name":"modulation of symbiont penetration peg formation for entry into host","type":"narrow"},{"name":"modulation of symbiont penetration peg initiation","type":"narrow"}],"termid":"GO:0075054"}


id: GO:1903871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a DNA recombinase mediator complex.","definition_xrefs":["GO_REF:0000079","PMID:18347097","GOC:rb","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair complex assembly","termid":"GO:0090735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"DNA recombinase mediator complex assembly","synonyms":[{"name":"DNA recombinase mediator complex formation","type":"exact"}],"termid":"GO:1903871"}


id: PR:Q1K9B6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pex22 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q1K9B6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19D5.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19D5.02c","synonyms":[{"name":"Spom972h-pex22","type":"exact"}],"termid":"PR:Q1K9B6"}


id: PBO:0036433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-A nucleosome disassembly protein Ccp1","termid":"PBO:0036433"}


id: GO:0009244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the core region of bacterial lipopolysaccharides, which contains ten saccharide residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide biosynthetic process","termid":"GO:0009312"},{"relation_name":"is_a","term_name":"lipopolysaccharide core region metabolic process","termid":"GO:0046401"},{"relation_name":"part_of","term_name":"lipopolysaccharide biosynthetic process","termid":"GO:0009103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0006629","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"lipopolysaccharide core region biosynthetic process","synonyms":[{"name":"LPS core region biosynthetic process","type":"exact"},{"name":"lipopolysaccharide core region anabolism","type":"exact"},{"name":"lipopolysaccharide core region biosynthesis","type":"exact"},{"name":"lipopolysaccharide core region formation","type":"exact"},{"name":"lipopolysaccharide core region synthesis","type":"exact"}],"termid":"GO:0009244"}


id: PBO:0060027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 15","termid":"PBO:0060027"}


id: PBO:0026819
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_vegetative_cell_with_central_constriction","termid":"PBO:0026819"}


id: PBO:0069293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 549, pseudogene","termid":"PBO:0069293"}


id: GO:1990133
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotetrameric protein complex which adenylates two molecules of the sulfur carrier subunit of the molybdopterin cofactor synthase using ATP as part of molybdopterin cofactor (Moco) biosynthesis. In E. coli the subunits are MoeB and MoaD; in human the subunits are MOCS3 and MOCS2A. Moco biosynthesis and its constituent molecules are evolutionarily conserved.","definition_xrefs":["PMID:18491921","GOC:bhm","PMID:11713534","PMID:16669776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase complex","termid":"GO:1902503"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737","GO:0005829"],"is_obsolete":false,"name":"molybdopterin adenylyltransferase complex","synonyms":[{"name":"MPT adenylyltransferase complex","type":"exact"},{"name":"molybdopterin cofactor (Moco) biosynthesis adenylyltransferase complex","type":"exact"}],"termid":"GO:1990133"}


id: PATO:0002522
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer having an elongate structure, similar to a ridge, that extends longitudinally along an anatomical entity.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keel-shaped","termid":"PATO:0002522"}


id: PBO:0083832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ethanolamine-phosphate cytidylyltransferase; catalyzes the second step of phosphatidylethanolamine biosynthesis; involved in the maintenance of plasma membrane; similar to mammalian CTP: phosphocholine cytidylyl-transferases; inability of the null mutant to synthesize phosphatidylethanolamine and phosphatidylcholine from ethanolamine is functionally complemented by human PCYT2","termid":"PBO:0083832"}


id: PBO:0079952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 5","termid":"PBO:0079952"}


id: GO:0170023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a specific soluble sweet compound has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:24474785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ionotropic taste receptor activity","termid":"GO:0170021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0038023","GO:0003674"],"is_obsolete":false,"name":"ionotropic sweet taste receptor activity","termid":"GO:0170023"}


id: PBO:0088111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar aminopeptidase Y; processed to mature form by Prb1p","termid":"PBO:0088111"}


id: PBO:0078461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable B (pseudogene)","termid":"PBO:0078461"}


id: GO:0043983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by the addition of an acetyl group to a lysine residue at position 12 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K12 acetylation (obsolete GO:0043983)","synonyms":[{"name":"histone H4 acetylation at K12","type":"exact"}],"termid":"GO:0043983"}


id: PBO:0087738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SMC5-SMC6 complex; this complex is involved in removal of X-shaped DNA structures that arise between sister chromatids during DNA replication and repair; heterozygous mutant shows haploinsufficiency in K1 killer toxin resistance","termid":"PBO:0087738"}


id: GO:0060724
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with an extracellular messenger, and in cooperation with a primary EGF receptor, initiating a change in cell activity through the EGF receptor signaling pathway.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete coreceptor activity involved in epidermal growth factor receptor signaling pathway (obsolete GO:0060724)","synonyms":[{"name":"coreceptor activity involved in epidermal growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0060724"}


id: GO:0034652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which extrachromosomal circular DNA molecules are transported to, or maintained in, a specific location in cells contributing to their aging.","definition_xrefs":["PMID:18660802","GOC:dph","GOC:tb","GOC:jp"],"gene_count":0,"genotype_count":0,"name":"obsolete extrachromosomal circular DNA localization involved in cell aging (obsolete GO:0034652)","synonyms":[{"name":"extrachromosomal circular DNA localisation involved in cell aging","type":"exact"},{"name":"extrachromosomal circular DNA localization during cell ageing","type":"exact"},{"name":"extrachromosomal circular DNA localization during cell aging","type":"related"}],"termid":"GO:0034652"}


id: PBO:0064466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta 3, accessory subunit","termid":"PBO:0064466"}


id: PBO:0112513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, UPF0768 family","termid":"PBO:0112513"}


id: GO:0046293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of formaldehyde (methanal, H2C=O), the simplest aldehyde.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule biosynthetic process","termid":"GO:0044283"},{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"},{"relation_name":"is_a","term_name":"formaldehyde metabolic process","termid":"GO:0046292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"formaldehyde biosynthetic process","synonyms":[{"name":"formaldehyde anabolism","type":"exact"},{"name":"formaldehyde biosynthesis","type":"exact"},{"name":"formaldehyde formation","type":"exact"},{"name":"formaldehyde synthesis","type":"exact"},{"name":"methanal biosynthesis","type":"exact"},{"name":"methanal biosynthetic process","type":"exact"}],"termid":"GO:0046293"}


id: PBO:0036177
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-S10_phosphorylation_during_vegetative_growth","termid":"PBO:0036177"}


id: PBO:0044365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 55","termid":"PBO:0044365"}


id: PBO:0041459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 88","termid":"PBO:0041459"}


id: PBO:0078026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 16","termid":"PBO:0078026"}


id: MOD:01236
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label - alkaline phosphatase to dephosphorylate","definition_xrefs":["PubMed:11467524","Unimod:258#Y","PubMed:15549660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(18)O monosubstituted residue","termid":"MOD:00581"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O monosubstituted L-tyrosine","synonyms":[{"name":"Label:18O(1)","type":"related"},{"name":"O18 Labeling","type":"related"}],"termid":"MOD:01236"}


id: FYPO:0007058
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to vacuole","synonyms":[{"name":"normal protein localisation to vacuole","type":"exact"},{"name":"normal protein localization in vacuole","type":"exact"},{"name":"normal protein localization to vacuole during mitotic cell cycle","type":"related"},{"name":"normal protein localization to vacuole during vegetative growth","type":"exact"}],"termid":"FYPO:0007058"}


id: GO:0004603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + phenylethanolamine = S-adenosyl-L-homocysteine + N-methylphenylethanolamine.","definition_xrefs":["EC:2.1.1.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"phenylethanolamine N-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.28-RXN","RHEA:12176","Reactome:R-HSA-209903"],"synonyms":[{"name":"S-adenosyl-L-methionine:phenylethanolamine N-methyltransferase activity","type":"related"},{"name":"noradrenalin N-methyltransferase activity","type":"related"},{"name":"noradrenaline N-methyltransferase activity","type":"related"},{"name":"norepinephrine N-methyltransferase activity","type":"related"},{"name":"norepinephrine methyltransferase activity","type":"related"},{"name":"phenethanolamine N-methyltransferase activity","type":"related"},{"name":"phenethanolamine methyltransferase activity","type":"related"}],"termid":"GO:0004603"}


id: GO:0005004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a GPI-anchored ephrin to initiate a change in cell activity.","definition_xrefs":["GOC:mah","PMID:9530499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ephrin receptor activity","termid":"GO:0005003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0004672","GO:0016740","GO:0140096","GO:0003674","GO:0016301","GO:0003824","GO:0038023"],"is_obsolete":false,"name":"GPI-linked ephrin receptor activity","synonyms":[{"name":"GPI-linked Eph receptor activity","type":"exact"}],"termid":"GO:0005004"}


id: PBO:0010271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aprataxin Hnt3","termid":"PBO:0010271"}


id: PBO:0042181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin B1 interacting protein 1 pseudogene 1","termid":"PBO:0042181"}


id: RO:0002573
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation that holds between an attribute or a qualifier and another attribute.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_modifier","termid":"RO:0002573"}


id: PATO:0000416
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000416 count value (obsolete PATO:0000416)","termid":"PATO:0000416"}


id: FYPO:0004779
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of farnesyltranstransferase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal farnesyltranstransferase activity","termid":"FYPO:0004779"}


id: GO:0046299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 2,4-dichlorophenoxyacetic acid, a chlorinated phenoxy compound which functions as a systemic herbicide and is used to control many types of broadleaf weeds.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4-dichlorophenoxyacetic acid biosynthetic process (obsolete GO:0046299)","synonyms":[{"name":"2,4-dichlorophenoxyacetic acid anabolism","type":"exact"},{"name":"2,4-dichlorophenoxyacetic acid biosynthesis","type":"exact"},{"name":"2,4-dichlorophenoxyacetic acid biosynthetic process","type":"exact"},{"name":"2,4-dichlorophenoxyacetic acid formation","type":"exact"},{"name":"2,4-dichlorophenoxyacetic acid synthesis","type":"exact"}],"termid":"GO:0046299"}


id: PATO:0002353
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that inheres in a bearer in virtue of its realizing one of its functions.","definition_xrefs":["PATOC:RH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionality","termid":"PATO:0001509"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activation quality","termid":"PATO:0002353"}


id: PBO:0043407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CKLF like MARVEL transmembrane domain containing 4","termid":"PBO:0043407"}


id: PR:Q9USM2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC16A11.15c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USM2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16A11.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.15c","synonyms":[{"name":"Spom972h-SPCC16A11.15c","type":"exact"}],"termid":"PR:Q9USM2"}


id: PBO:0090306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-ribosomal factor","termid":"PBO:0090306"}


id: PBO:0055304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2731","termid":"PBO:0055304"}


id: PATO:0000244
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000244 ocular reflex (obsolete PATO:0000244)","termid":"PATO:0000244"}


id: PATO:0001292
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An EM radiation quality that is independent of the EM wavelength range.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electromagnetic (EM) radiation quality","termid":"PATO:0001291"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"full-spectrum EM radiation quality","termid":"PATO:0001292"}


id: PBO:0061531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase","termid":"PBO:0061531"}


id: FYPO:0008236
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An RNA localization phenotype where the loading of siRNAs onto the RITs complex is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA localization to chromatin","termid":"FYPO:0003059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal siRNA loading onto RITS complex","termid":"FYPO:0008236"}


id: GO:0010049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a plant acquires the ability to respond to a floral inductive signal.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acquisition of plant reproductive competence","synonyms":[{"name":"acquisition of reproductive competence","type":"broad"}],"termid":"GO:0010049"}


id: GO:0034309
data:
  {"annotated_genes":["SJAG_02420","SJAG_04067","SJAG_02421","SJAG_03362","SJAG_04282","SJAG_00381","SJAG_02406","SJAG_03538","SJAG_00827","SJAG_01970","SJAG_04866"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85111,109765],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[90361,109672,112104,103447,95589,109678,110090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[106520,106521,95592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of primary alcohols. A primary alcohol is any alcohol in which a hydroxy group, -OH, is attached to a saturated carbon atom which has either three hydrogen atoms attached to it or only one other carbon atom and two hydrogen atoms attached to it.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00381":null,"SJAG_00827":null,"SJAG_01970":null,"SJAG_02406":null,"SJAG_02420":null,"SJAG_02421":null,"SJAG_03362":null,"SJAG_03538":null,"SJAG_04067":null,"SJAG_04282":null,"SJAG_04866":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"primary alcohol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"monohydric alcohol biosynthetic process","type":"exact"},{"name":"primary alcohol anabolism","type":"exact"},{"name":"primary alcohol biosynthesis","type":"exact"},{"name":"primary alcohol formation","type":"exact"},{"name":"primary alcohol synthesis","type":"exact"}],"termid":"GO:0034309","terms_by_termid":{"GO:0009228":null,"GO:0036172":null,"GO:0090180":null}}


id: FYPO:0006419
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which sites at which the protein Rad51 accumulates remain present for longer than normal during the meiotic cell cycle. Normally, Rad51 foci form during prophase I but disappear before metaphase I.","definition_xrefs":["PMID:27304859","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of Rad51 focus presence during meiotic cell cycle","synonyms":[{"name":"prolonged Rad51 focus presence during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006419"}


id: GO:0022879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + trehalose(out) = protein histidine + trehalose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"trehalose transmembrane transporter activity","termid":"GO:0015574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-trehalose phosphotransferase system transporter activity","synonyms":[{"name":"trehalose PTS transporter activity","type":"exact"}],"termid":"GO:0022879"}


id: GO:0030395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lactose, a disaccharide of glucose and galactose, the carbohydrate of milk.","definition_xrefs":["ISBN:0192800981","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide binding","termid":"GO:0048030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"lactose binding","termid":"GO:0030395"}


id: PBO:0070072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 29, pseudogene","termid":"PBO:0070072"}


id: PBO:0046306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enamelin","termid":"PBO:0046306"}


id: FYPO:0007633
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of lysine at position 14 of histone H3 at the silent mating-type cassettes occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0005310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K14 acetylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"increased histone H3-K14 acetylation at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"increased histone H3K14 acetylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"increased histone H3K14 acetylation at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0007633"}


id: GO:0060856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the barrier between the blood and the brain. The cells in the brain are packed tightly together preventing the passage of most molecules from the blood into the brain. Only lipid soluble molecules or those that are actively transported can pass through the blood-brain barrier.","definition_xrefs":["PMID:30280653","GOC:sart","GOC:aruk","GOC:dph","PMID:20080302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of blood-brain barrier","synonyms":[{"name":"establishment of BBB","type":"exact"},{"name":"establishment of blood/brain barrier","type":"exact"}],"termid":"GO:0060856"}


id: PBO:0079069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 3-3","termid":"PBO:0079069"}


id: GO:0000211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Covalent addition of polyubiquitin to another protein, targeting the tagged protein for destruction.","definition_xrefs":["GOC:cl","ISBN:0815316194"],"gene_count":0,"genotype_count":0,"name":"obsolete protein degradation tagging activity (obsolete GO:0000211)","synonyms":[{"name":"protein degradation tagging activity","type":"exact"}],"termid":"GO:0000211"}


id: GO:0023038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a diffusible signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by diffusible mediator (obsolete GO:0023038)","synonyms":[{"name":"signal initiation by diffusible mediator","type":"exact"}],"termid":"GO:0023038"}


id: PBO:0084409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lysophospholipase; hydrolyzes lysophosphatidylserine to release free fatty acid; involved in regulated cell death; localizes to both the nucleus and cytoplasm; contains a catalytic triad of Ser-His-Asp that is part of an alpha/beta hydrolase fold and a lipase motif (GXSXG); sequence similarity to Fsh2p and Fsh3p and the human candidate tumor suppressor and serine hydrolase, OVCA2","termid":"PBO:0084409"}


id: GO:0102809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + delphinidin 3-O-beta-D-glucoside = H+ + delphinidin 3-O-sophoroside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete delphinidin 3-O-glucoside 2''-O-glucosyltransferase activity (obsolete GO:0102809)","termid":"GO:0102809"}


id: PBO:0080866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 domain family member 7","termid":"PBO:0080866"}


id: SO:0001336
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Wyosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wyosine","secondary_identifiers":["RNAMOD:041"],"synonyms":[{"name":"IMG","type":"exact"}],"termid":"SO:0001336"}


id: GO:1901513
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of lipo-chitin oligosaccharide from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"lipo-chitin oligosaccharide transmembrane transporter activity","termid":"GO:1901513"}


id: GO:0003412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of the apicobasal polarity of an epithelial cell that contributes to the shaping of a camera-type eye.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of epithelial cell apical/basal polarity","termid":"GO:0045198"},{"relation_name":"part_of","term_name":"camera-type eye morphogenesis","termid":"GO:0048593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of epithelial cell apical/basal polarity involved in camera-type eye morphogenesis","termid":"GO:0003412"}


id: PATO:0002078
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having an empty space or cavity within.","direct_ancestors":[{"relation_name":"is_a","term_name":"structure, cavities","termid":"PATO:0002014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hollow","termid":"PATO:0002078"}


id: PBO:0076027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 24 pseudogene 1","termid":"PBO:0076027"}


id: PBO:0068178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 485","termid":"PBO:0068178"}


id: PBO:0064699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 35","termid":"PBO:0064699"}


id: PBO:0066202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 17 pseudogene 3","termid":"PBO:0066202"}


id: PBO:0079605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2F pseudogene 2","termid":"PBO:0079605"}


id: PBO:0086135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for meiotic recombination and gene conversion; null mutant displays reduced PIS1 expression and growth defects on non-fermentable carbon sources and minimal media; GFP-fusion protein localizes to both cytoplasm and nucleus","termid":"PBO:0086135"}


id: PBO:0017953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine synthase Pus7 (predicted)","termid":"PBO:0017953"}


id: GO:0002615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of monocyte antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation","termid":"GO:0002579"},{"relation_name":"is_a","term_name":"regulation of monocyte antigen processing and presentation","termid":"GO:0002613"},{"relation_name":"positively_regulates","term_name":"monocyte antigen processing and presentation","termid":"GO:0002471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of monocyte antigen processing and presentation","synonyms":[{"name":"activation of monocyte antigen processing and presentation","type":"narrow"},{"name":"stimulation of monocyte antigen processing and presentation","type":"narrow"},{"name":"up regulation of monocyte antigen processing and presentation","type":"exact"},{"name":"up-regulation of monocyte antigen processing and presentation","type":"exact"},{"name":"upregulation of monocyte antigen processing and presentation","type":"exact"}],"termid":"GO:0002615"}


id: GO:0044803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process which results in the assembly, arrangement of constituent parts, or disassembly of a membrane, involving more than one organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism membrane organization (obsolete GO:0044803)","termid":"GO:0044803"}


id: PBO:0085459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Predicted lipase; binds variant medium clathrin chain Apm2p and contributes to its membrane recruitment; putative integral membrane protein that interacts with Rpp0p component of ribosomal stalk","termid":"PBO:0085459"}


id: GO:0019634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphonates, any organic compounds containing one or more C-PO(OH)2 or C-PO(OR)2 (with R=alkyl, aryl) groups. Metabolism of phosphonic acid itself, an inorganic compound without the biochemically relevant C-P bond, is not included.","definition_xrefs":["ISBN:0721662544","GOC:js"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"oxoacid metabolic process","termid":"GO:0043436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"organic phosphonate metabolic process","synonyms":[{"name":"organophosphonate metabolic process","type":"related"},{"name":"phosphonate metabolism","type":"exact"}],"termid":"GO:0019634"}


id: PBO:0076547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TatD DNase domain containing 1 pseudogene 1","termid":"PBO:0076547"}


id: PBO:0054473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1873","termid":"PBO:0054473"}


id: PBO:0063358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Purkinje cell protein 4","termid":"PBO:0063358"}


id: GO:0071306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin E stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin E","termid":"GO:0033197"},{"relation_name":"is_a","term_name":"cellular response to vitamin","termid":"GO:0071295"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin E","synonyms":[{"name":"cellular response to DL-alpha-tocopherol acetate","type":"narrow"},{"name":"cellular response to DL-alpha-tocopheryl acetate","type":"narrow"},{"name":"cellular response to O-Acetyl-alpha-tocopherol","type":"narrow"}],"termid":"GO:0071306"}


id: PBO:0001147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial succinate dehydrogenase assembly factor 1 (predicted)","termid":"PBO:0001147"}


id: GO:0000052
data:
  {"annotated_genes":["SJAG_00635"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019240"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving citrulline, N5-carbamoyl-L-ornithine, an alpha amino acid not found in proteins.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"citrulline metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"citrulline metabolism","type":"exact"}],"termid":"GO:0000052","terms_by_termid":{"GO:0019240":null}}


id: GO:0003007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which the heart is generated and organized. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.","definition_xrefs":["GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart morphogenesis","synonyms":[{"name":"cardiac morphogenesis","type":"related"}],"termid":"GO:0003007"}


id: PBO:0030541
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_cAMP_level_during_cellular_response_to_glucose_stimulus","termid":"PBO:0030541"}


id: SO:0001550
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes the rate of transcription with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription_variant","termid":"SO:0001549"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rate_of_transcription_variant","synonyms":[{"name":"rate of transcription variant","type":"exact"}],"termid":"SO:0001550"}


id: GO:0140439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a stearoyl (systematic name, octadecanoyl) group to a sulfur atom on the cysteine of a protein molecule, in the reaction: octadecanoyl-CoA + L-cysteinyl-[protein] = CoA + S-octadecanoyl-L-cysteinyl-[protein].","definition_xrefs":["PMID:12681491","RHEA:59740","PMID:22968831","PMID:22247542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-cysteine S-acyltransferase activity","termid":"GO:0019707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"protein-cysteine S-stearoyltransferase activity","termid":"GO:0140439"}


id: PBO:0000040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symbol","termid":"PBO:0000040"}


id: GO:1900888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pentadecane biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pentadecane biosynthetic process","termid":"GO:1900887"},{"relation_name":"is_a","term_name":"negative regulation of pentadecane metabolic process","termid":"GO:1900891"},{"relation_name":"is_a","term_name":"negative regulation of alkane biosynthetic process","termid":"GO:1901578"},{"relation_name":"negatively_regulates","term_name":"pentadecane biosynthetic process","termid":"GO:1900634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pentadecane biosynthetic process","synonyms":[{"name":"down regulation of pentadecane anabolism","type":"related"},{"name":"down regulation of pentadecane biosynthesis","type":"related"},{"name":"down regulation of pentadecane biosynthetic process","type":"exact"},{"name":"down regulation of pentadecane formation","type":"related"},{"name":"down regulation of pentadecane synthesis","type":"related"},{"name":"down-regulation of pentadecane anabolism","type":"related"},{"name":"down-regulation of pentadecane biosynthesis","type":"related"},{"name":"down-regulation of pentadecane biosynthetic process","type":"exact"},{"name":"down-regulation of pentadecane formation","type":"related"},{"name":"down-regulation of pentadecane synthesis","type":"related"},{"name":"downregulation of pentadecane anabolism","type":"related"},{"name":"downregulation of pentadecane biosynthesis","type":"related"},{"name":"downregulation of pentadecane biosynthetic process","type":"exact"},{"name":"downregulation of pentadecane formation","type":"related"},{"name":"downregulation of pentadecane synthesis","type":"related"},{"name":"inhibition of pentadecane anabolism","type":"related"},{"name":"inhibition of pentadecane biosynthesis","type":"narrow"},{"name":"inhibition of pentadecane biosynthetic process","type":"narrow"},{"name":"inhibition of pentadecane formation","type":"related"},{"name":"inhibition of pentadecane synthesis","type":"narrow"},{"name":"negative regulation of pentadecane anabolism","type":"related"},{"name":"negative regulation of pentadecane biosynthesis","type":"related"},{"name":"negative regulation of pentadecane formation","type":"related"},{"name":"negative regulation of pentadecane synthesis","type":"related"}],"termid":"GO:1900888"}


id: PBO:0005699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L27 (predicted)","termid":"PBO:0005699"}


id: PBO:0074055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A34 and TMEM82 antisense RNA 1","termid":"PBO:0074055"}


id: PBO:0075974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroidogenic acute regulatory protein pseudogene 1","termid":"PBO:0075974"}


id: GO:1900014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell in response to the presence of 3',5'-cAMP that results in a change in state or activity (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a calcium ion stimulus.","definition_xrefs":["PMID:19363786","GOC:pf","PMID:21239624","PMID:8937985","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to calcium ion involved in chemotaxis to cAMP (obsolete GO:1900014)","synonyms":[{"name":"cellular response to Ca2+ ion of chemotaxis to 3',5' cAMP","type":"exact"},{"name":"cellular response to Ca2+ ion of chemotaxis to 3',5'-cAMP","type":"exact"},{"name":"cellular response to Ca2+ ion of chemotaxis to adenosine 3',5'-cyclophosphate","type":"exact"},{"name":"cellular response to Ca2+ ion of chemotaxis to cAMP","type":"related"},{"name":"cellular response to Ca2+ ion of chemotaxis to cyclic AMP","type":"exact"},{"name":"cellular response to calcium ion involved in chemotaxis to cAMP","type":"exact"},{"name":"cellular response to calcium ion of chemotaxis to 3',5' cAMP","type":"related"},{"name":"cellular response to calcium ion of chemotaxis to 3',5'-cAMP","type":"related"},{"name":"cellular response to calcium ion of chemotaxis to adenosine 3',5'-cyclophosphate","type":"related"},{"name":"cellular response to calcium ion of chemotaxis to cAMP","type":"related"},{"name":"cellular response to calcium ion of chemotaxis to cyclic AMP","type":"related"}],"termid":"GO:1900014"}


id: PBO:0003652
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Random Septum Postioning","termid":"PBO:0003652"}


id: PBO:0063450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 8B","termid":"PBO:0063450"}


id: GO:0021565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the accessory nerve over time, from its formation to the mature structure. In mice, the spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","GO_REF:0000021","ISBN:0838580343","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"accessory nerve development","synonyms":[{"name":"CN XI development","type":"related"},{"name":"cranial nerve 11 development","type":"related"},{"name":"cranial nerve XI development","type":"exact"},{"name":"spinal accessory nerve development","type":"exact"}],"termid":"GO:0021565"}


id: PBO:0047523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"free fatty acid receptor 3","termid":"PBO:0047523"}


id: PBO:0063019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylalanine hydroxylase","termid":"PBO:0063019"}


id: PBO:0064146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKNOX2 antisense RNA 1","termid":"PBO:0064146"}


id: GO:0140690
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heteromultimeric complex capable of dihydropyrimidine dehydrogenase (NAD+); in E. coli, composed of PreA and PreT.","definition_xrefs":["PMID:21169495","PMID:34097066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"dihydropyrimidine dehydrogenase (NAD+) complex","secondary_identifiers":["MetaCyc:CPLX0-7788"],"termid":"GO:0140690"}


id: PBO:0049365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2I repeat domain containing 1","termid":"PBO:0049365"}


id: PBO:0031155
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transport","termid":"PBO:0031155"}


id: PBO:0062435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 99 pseudogene","termid":"PBO:0062435"}


id: GO:0044521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with resultant muscle damage in the bitten organism.","definition_xrefs":["GOC:jl","PMID:10620318","GOC:fj","PMID:21150580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of process in another organism","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in muscle damage in another organism","synonyms":[{"name":"envenomation resulting in muscle damage in other organism","type":"exact"}],"termid":"GO:0044521"}


id: PBO:0004380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ypt7","termid":"PBO:0004380"}


id: PomGeneEx:0000026
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExRD","definition":"A qualifier that indicates that the fraction of ribosomes that are translating each codon of an mRNA is higher under one set of conditions or at one indicated time than otherwise.","definition_xrefs":["PomBase:mah","PMID:29432178","PMID:33313903"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased","termid":"PomGeneEx:0000002"},{"relation_name":"is_a","term_name":"ribosomal density","termid":"PomGeneEx:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal density increased","synonyms":[{"name":"increased ribosomal density","type":"exact"},{"name":"ribosome density increased","type":"exact"},{"name":"ribosome occupancy increased","type":"exact"}],"termid":"PomGeneEx:0000026"}


id: GO:0004817
data:
  {"annotated_genes":["SJAG_00420"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91646],"is_not":false,"summary":null,"term":"GO:0004817"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-cysteine + tRNA(Cys) = AMP + diphosphate + L-cysteinyl-tRNA(Cys).","definition_xrefs":["EC:6.1.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00420":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0140101","GO:0140098","GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"cysteine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-380158","MetaCyc:CYSTEINE--TRNA-LIGASE-RXN","RHEA:17773","Reactome:R-HSA-379887"],"synonyms":[{"name":"L-cysteine:tRNACys ligase (AMP-forming)","type":"related"},{"name":"cysteine translase activity","type":"related"},{"name":"cysteinyl-tRNA synthetase activity","type":"exact"},{"name":"cysteinyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"cysteinyl-transferRNA synthetase activity","type":"related"}],"termid":"GO:0004817","terms_by_termid":{"GO:0004817":null}}


id: PBO:0005095
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses per1","termid":"PBO:0005095"}


id: PBO:0061263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"notch receptor 3","termid":"PBO:0061263"}


id: PBO:0064525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit E","termid":"PBO:0064525"}


id: PBO:0062265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily F member 2 pseudogene","termid":"PBO:0062265"}


id: PBO:0038292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interaction_rescued_phenotype_id","termid":"PBO:0038292"}


id: PBO:0058398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4770","termid":"PBO:0058398"}


id: PATO:0000381
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A frequency which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"frequency","termid":"PATO:0000044"},{"relation_name":"is_a","term_name":"decreased rate","termid":"PATO:0000911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased frequency","synonyms":[{"name":"infrequent","type":"related"},{"name":"low frequency","type":"exact"}],"termid":"PATO:0000381"}


id: GO:0098833
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized region of the plasma membrane and underlying cytoplasm which surround the the active zone, into which synaptic vesicle membranes are recycled following exocytosis. It is especially enriched in endocytic proteins following intense activity.","definition_xrefs":["PMID:17455288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"presynapse","termid":"GO:0098793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"presynaptic endocytic zone","termid":"GO:0098833"}


id: PBO:0036234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein L-glutamate O-methyltransferase, implicated in DNA damage response (predicted)","termid":"PBO:0036234"}


id: PBO:0083174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps ORF TRM5/YHR070W","termid":"PBO:0083174"}


id: PR:Q9UST1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk26 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UST1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAB-dependent poly(A)-specific ribonuclease subunit pan3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.14c","synonyms":[{"name":"PAB1P-dependent poly(A)-nuclease (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PAN deadenylation complex subunit 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ppk26","type":"exact"}],"termid":"PR:Q9UST1"}


id: PR:000028992
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An sre1-type sterol regulatory element-binding protein 1 cleaved 1 in Schizosaccharomyces pombe. This form is the N-terminal domain of the membrane protein sre1 that is cleaved off upon activation (e.g. by hypoxia). UniProtKB:Q9UUD1-1, 1-440.","definition_xrefs":["PomBase:AL","PMID:22017871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sre1/Clv:(1-440)","pombase_gene_id":"SPBC19C2.09","synonyms":[{"name":"PomBase_original_PRO_term_name: Sre1N (Schizosaccharomyces pombe)","type":"exact"},{"name":"sre1/Clv:(1-440)","type":"exact"}],"termid":"PR:000028992"}


id: PBO:0114139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosyl hydrolase family 3, Ghf3","termid":"PBO:0114139"}


id: PBO:0110804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human WRAP53 orthlog Gnr1","termid":"PBO:0110804"}


id: PBO:0062462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 149 pseudogene","termid":"PBO:0062462"}


id: PBO:0063380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"programmed cell death 1","termid":"PBO:0063380"}


id: GO:0033487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pelargonidin 3-O-glucoside, a basic anthocyanin responsible for red to magenta coloration of flowers and fruits.","definition_xrefs":["MetaCyc:PWY-5125","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid biosynthetic process","termid":"GO:0009813"},{"relation_name":"is_a","term_name":"beta-glucoside biosynthetic process","termid":"GO:1901806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pelargonidin 3-O-glucoside biosynthetic process","synonyms":[{"name":"pelargonidin 3-O-glucoside anabolism","type":"exact"},{"name":"pelargonidin 3-O-glucoside biosynthesis","type":"exact"},{"name":"pelargonidin 3-O-glucoside formation","type":"exact"},{"name":"pelargonidin 3-O-glucoside synthesis","type":"exact"}],"termid":"GO:0033487"}


id: GO:1905045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of Schwann cell proliferation involved in axon regeneration.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","PMID:22393241","GOC:rph","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of Schwann cell proliferation","termid":"GO:0010626"},{"relation_name":"is_a","term_name":"regulation of Schwann cell proliferation involved in axon regeneration","termid":"GO:1905044"},{"relation_name":"negatively_regulates","term_name":"Schwann cell proliferation involved in axon regeneration","termid":"GO:0014011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Schwann cell proliferation involved in axon regeneration","synonyms":[{"name":"down regulation of Schwann cell proliferation involved in axon regeneration","type":"exact"},{"name":"down-regulation of Schwann cell proliferation involved in axon regeneration","type":"exact"},{"name":"downregulation of Schwann cell proliferation involved in axon regeneration","type":"exact"},{"name":"inhibition of Schwann cell proliferation involved in axon regeneration","type":"narrow"}],"termid":"GO:1905045"}


id: GO:0032107
data:
  {"annotated_genes":["SJAG_04268","SJAG_03048","SJAG_02785","SJAG_03319"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043609"},{"annotations":[98464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904547"},{"annotations":[109918,84919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006808"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a response to nutrient levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to nutrient levels","termid":"GO:0031667"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02785":null,"SJAG_03048":null,"SJAG_03319":null,"SJAG_04268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to nutrient levels","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032107","terms_by_termid":{"GO:0006808":null,"GO:0043609":null,"GO:1904547":null}}


id: PBO:0083489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YBR278W","termid":"PBO:0083489"}


id: GO:0003799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Inhibits the growth of, or directly kills, fungal cells.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete antifungal peptide activity (obsolete GO:0003799)","synonyms":[{"name":"antifungal peptide activity","type":"exact"}],"termid":"GO:0003799"}


id: PBO:0053665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 842","termid":"PBO:0053665"}


id: GO:0032387
data:
  {"annotated_genes":["SJAG_01311"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of substances within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"negatively_regulates","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intracellular transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of intracellular transport","type":"exact"},{"name":"down-regulation of intracellular transport","type":"exact"},{"name":"downregulation of intracellular transport","type":"exact"},{"name":"inhibition of intracellular transport","type":"narrow"}],"termid":"GO:0032387","terms_by_termid":{"GO:0042308":null}}


id: GO:0140354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a lipid from outside of a cell into a cell. This may occur via transport across the plasma membrane or via endocytosis.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"lipid import into cell","synonyms":[{"name":"lipid uptake","type":"broad"}],"termid":"GO:0140354"}


id: PBO:0055455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2887","termid":"PBO:0055455"}


id: PR:O43046
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A V-type proton ATPase subunit F that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03956","PRO:DNx","PANTHER:PTHR13861:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit F (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.18c","secondary_identifiers":["UniProtKB:O43046"],"synonyms":[{"name":"Spom972h-ATP6V1F","type":"exact"},{"name":"V-ATPase subunit F (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit F (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43046"}


id: GO:2001240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of extrinsic apoptotic signaling pathway in absence of ligand.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction in absence of ligand","termid":"GO:1901099"},{"relation_name":"is_a","term_name":"negative regulation of extrinsic apoptotic signaling pathway","termid":"GO:2001237"},{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway in absence of ligand","termid":"GO:2001239"},{"relation_name":"negatively_regulates","term_name":"extrinsic apoptotic signaling pathway in absence of ligand","termid":"GO:0097192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of extrinsic apoptotic signaling pathway in absence of ligand","synonyms":[{"name":"negative regulation of dependence receptor signaling pathway","type":"related"},{"name":"negative regulation of extrinsic apoptosis in absence of ligand","type":"narrow"},{"name":"negative regulation of extrinsic apoptotic signalling pathway in absence of ligand","type":"exact"}],"termid":"GO:2001240"}


id: PBO:0078446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma joining P1","termid":"PBO:0078446"}


id: GO:0097718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a disordered domain of a protein.","definition_xrefs":["GOC:gg","PMID:11746698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"disordered domain specific binding","synonyms":[{"name":"disordered protein domain specific binding","type":"related"}],"termid":"GO:0097718"}


id: GO:1904121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes phosphatidylethanolamine from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["GO_REF:0000066","GOC:TermGenie","PMID:8606365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transfer activity","termid":"GO:0120014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0120013","GO:0005215"],"is_obsolete":false,"name":"phosphatidylethanolamine transfer activity","synonyms":[{"name":"intermembrane phosphatidylethanolamine transfer activity","type":"narrow"},{"name":"phosphatidylethanolamine carrier activity","type":"exact"},{"name":"phosphatidylethanolamine transporter activity","type":"broad"}],"termid":"GO:1904121"}


id: GO:0060160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of dopamine receptor protein signaling pathway activity. A dopamine receptor signaling pathway is the series of molecular signals generated as a consequence of a dopamine receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"is_a","term_name":"regulation of dopamine receptor signaling pathway","termid":"GO:0060159"},{"relation_name":"negatively_regulates","term_name":"G protein-coupled dopamine receptor signaling pathway","termid":"GO:0007212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of dopamine receptor signaling pathway","synonyms":[{"name":"negative regulation of dopamine receptor signalling pathway","type":"exact"}],"termid":"GO:0060160"}


id: GO:0103035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3 H+ + methyl-1,4-benzoquinone + NADPH = methyl-1,4-benzoquinol + NADP.","definition_xrefs":["EC:1.6.5.-","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete NADPH:methyl-1,4-benzoquinone oxidoreductase activity (obsolete GO:0103035)","termid":"GO:0103035"}


id: FYPO:0000312
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a normal germ tube, and undergoes septation, but does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with normal germ tube morphology","termid":"FYPO:0000310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination with normal, septated germ tube morphology","synonyms":[{"name":"inviable following spore germination with normal, septated germ tube morphology","type":"exact"},{"name":"inviable germinated spore with normal, septated germ tube morphology","type":"exact"},{"name":"lethal after spore germination with normal, septated germ tube morphology","type":"exact"}],"termid":"FYPO:0000312"}


id: internal:interim
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interim","termid":"internal:interim"}


id: PR:O14085
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2F3.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocation protein sec72 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.02","synonyms":[{"name":"Spom972h-SPAC2F3.02","type":"exact"}],"termid":"PR:O14085"}


id: PBO:0052874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 6-3","termid":"PBO:0052874"}


id: GO:0102258
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a 1,3-diglyceride = a monoglyceride + a fatty acid.","definition_xrefs":["PMID:21477884","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1,3-diacylglycerol acylhydrolase activity","secondary_identifiers":["MetaCyc:RXN-12433"],"termid":"GO:0102258"}


id: PBO:0050527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterochromatin protein 1 binding protein 3","termid":"PBO:0050527"}


id: PBO:0038824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 30","termid":"PBO:0038824"}


id: GO:0140787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the active transport of a phosphate ion across a membrane by a mechanism involving conformational change, where energy for active transport is derived from membrane potential if the solute is charged.","definition_xrefs":["PMID:29642010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate transmembrane transporter activity","termid":"GO:0005315"},{"relation_name":"is_a","term_name":"membrane potential driven uniporter activity","termid":"GO:0022810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"phosphate ion uniporter activity","termid":"GO:0140787"}


id: PBO:0001502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA ligase Trl1 (predicted)","termid":"PBO:0001502"}


id: PATO:0000206
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000206 enzyme function (obsolete PATO:0000206)","termid":"PATO:0000206"}


id: PBO:0050008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemojuvelin BMP co-receptor","termid":"PBO:0050008"}


id: PBO:0036392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane transporter Mfs3","termid":"PBO:0036392"}


id: PBO:0034771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M1 aminopeptidase, nascent chain-associated protein (predicted)","termid":"PBO:0034771"}


id: GO:0032917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of polyamines by addition of acetyl groups.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine metabolic process","termid":"GO:0006595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyamine acetylation","termid":"GO:0032917"}


id: GO:0002045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates the frequency, rate or extent of attachment of a blood vessel endothelial cell to another cell or to the extracellular matrix involved in intussusceptive angiogenesis.","definition_xrefs":["PMID:16391003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell adhesion","termid":"GO:0030155"},{"relation_name":"part_of","term_name":"intussusceptive angiogenesis","termid":"GO:0002041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of cell adhesion involved in intussusceptive angiogenesis","termid":"GO:0002045"}


id: PBO:0028252
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_G1/S_transition_delay_following_nitrogen_starvation-induced_G1_phase_arrest","termid":"PBO:0028252"}


id: PBO:0085139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein required for rRNA synthesis and ribosomal assembly; required for the synthesis of 18S rRNA and for the assembly of 40S ribosomal subunit; essential gene","termid":"PBO:0085139"}


id: PBO:0044833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 121","termid":"PBO:0044833"}


id: PBO:0081144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP62 zinc finger protein","termid":"PBO:0081144"}


id: PBO:0059595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 7","termid":"PBO:0059595"}


id: GO:1904140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of microglial cell migration.","definition_xrefs":["GOC:BHF","GOC:nc","GO_REF:0000058","GOC:TermGenie","PMID:19100238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glial cell migration","termid":"GO:1903976"},{"relation_name":"is_a","term_name":"regulation of microglial cell migration","termid":"GO:1904139"},{"relation_name":"is_a","term_name":"negative regulation of macrophage migration","termid":"GO:1905522"},{"relation_name":"negatively_regulates","term_name":"microglial cell migration","termid":"GO:1904124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of microglial cell migration","synonyms":[{"name":"down regulation of microglial cell migration","type":"exact"},{"name":"down-regulation of microglial cell migration","type":"exact"},{"name":"downregulation of microglial cell migration","type":"exact"},{"name":"inhibition of microglial cell migration","type":"narrow"}],"termid":"GO:1904140"}


id: PBO:0005244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIIC complex subunit Sfc4","termid":"PBO:0005244"}


id: PBO:0064506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit G","termid":"PBO:0064506"}


id: GO:0014715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process taking place in the trunk whereby the developmental fate of a cell becomes restricted such that it will develop into a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["GOC:mtg_muscle","CL:0000056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoblast fate commitment","termid":"GO:0048625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast fate commitment in trunk","termid":"GO:0014715"}


id: PBO:0067801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 103","termid":"PBO:0067801"}


id: PBO:0057798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3120","termid":"PBO:0057798"}


id: GO:0052811
data:
  {"annotated_genes":["SJAG_01863"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87902],"is_not":false,"summary":null,"term":"GO:0052811"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1-phosphatidyl-1D-myo-inositol 3-phosphate + ATP = a 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate + ADP + H+.","definition_xrefs":["PMID:9660759","PMID:9211928","PMID:9367159","RHEA:63688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol kinase activity","termid":"GO:0052742"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01863":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"1-phosphatidylinositol-3-phosphate 4-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1676145","MetaCyc:RXN-10957"],"synonyms":[{"name":"phosphatidylinositol 3-phosphate 4-kinase activity","type":"exact"}],"termid":"GO:0052811","terms_by_termid":{"GO:0052811":null}}


id: FYPO:0000786
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which plasmids are lost at a higher frequency than normal. Plasmid loss occurs when one or both daughter cells do not inherit copies of a plasmid from the mother cell, and may result from failure of plasmid replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased plasmid loss","synonyms":[{"name":"increased plasmid loss during mitotic cell cycle","type":"related"},{"name":"increased plasmid loss during vegetative growth","type":"exact"}],"termid":"FYPO:0000786"}


id: PBO:0005831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prephenate dehydrogenase [NADP+] Tyr1 (predicted)","termid":"PBO:0005831"}


id: PBO:0030350
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_kinetochore_during_vegetative_growth","termid":"PBO:0030350"}


id: PBO:0048408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated kinase 1B","termid":"PBO:0048408"}


id: PBO:0072328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 14","termid":"PBO:0072328"}


id: GO:0050414
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formimidoyl-L-aspartate + H2O = N-formyl-L-aspartate + NH3.","definition_xrefs":["EC:3.5.3.5","MetaCyc:FORMIMINOASPARTATE-DEIMINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"formimidoylaspartate deiminase activity","secondary_identifiers":["RHEA:13661"],"synonyms":[{"name":"N-formimidoyl-L-aspartate iminohydrolase activity","type":"related"},{"name":"formiminoaspartate deiminase activity","type":"exact"}],"termid":"GO:0050414"}


id: GO:0031547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a brain-derived neurotrophic factor receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"brain-derived neurotrophic factor receptor signaling pathway","synonyms":[{"name":"BDNF receptor signaling pathway","type":"exact"},{"name":"BDNF signalling pathway","type":"exact"},{"name":"brain-derived neurotrophic factor receptor signalling pathway","type":"exact"}],"termid":"GO:0031547"}


id: PBO:0028659
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_anaphase-promoting_complex_binding","termid":"PBO:0028659"}


id: PR:O94429
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongation factor G 2, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02366","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome-releasing factor 2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC660.10","secondary_identifiers":["UniProtKB:O94429"],"synonyms":[{"name":"EF-G2mt (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RRF2mt (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-GFM2","type":"exact"},{"name":"elongation factor G 2, mitochondrial (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mEF-G 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94429"}


id: PR:G2TRN3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB15E9.06 gene.","definition_xrefs":["UniProtKB:G2TRN3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transmembrane protein PB15E9.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB15E9.06","synonyms":[{"name":"Spom972h-SPAPB15E9.06","type":"exact"}],"termid":"PR:G2TRN3"}


id: GO:0006703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of estrogens, C18 steroid hormones that can stimulate the development of female sexual characteristics. Also found in plants.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"estrogen metabolic process","termid":"GO:0008210"},{"relation_name":"is_a","term_name":"hormone biosynthetic process","termid":"GO:0042446"},{"relation_name":"is_a","term_name":"steroid hormone biosynthetic process","termid":"GO:0120178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"estrogen biosynthetic process","synonyms":[{"name":"estrogen anabolism","type":"exact"},{"name":"estrogen biosynthesis","type":"exact"},{"name":"estrogen formation","type":"exact"},{"name":"estrogen synthesis","type":"exact"},{"name":"oestrogen biosynthesis","type":"exact"},{"name":"oestrogen biosynthetic process","type":"exact"}],"termid":"GO:0006703"}


id: PBO:0050583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparan sulfate 6-O-sulfotransferase 1","termid":"PBO:0050583"}


id: GO:1905692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of an endoplasmic reticulum into its constituent components.","definition_xrefs":["GOC:TermGenie","GOC:pr","GO_REF:0000079","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum organization","termid":"GO:0007029"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum disassembly","synonyms":[{"name":"ER disassembly","type":"exact"}],"termid":"GO:1905692"}


id: PBO:0080525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP family homolog 7, pseudogene","termid":"PBO:0080525"}


id: PBO:0088063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-protein ligase subunit of the CCR4-NOT complex; with Ubc4p, ubiquitinates nascent polypeptide-associated complex subunits and histone demethyase Jhd2p; CCR4-NOT has roles in transcription regulation, mRNA degradation, and post-transcriptional modifications; regulates levels of DNA Polymerase-{alpha} to promote efficient and accurate DNA replication","termid":"PBO:0088063"}


id: MOD:01244
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamioc acid residue to the potassium glutamate salt.","definition_xrefs":["Unimod:530#E"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"},{"relation_name":"is_a","term_name":"monopotassium salt","termid":"MOD:01072"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium L-glutamate","synonyms":[{"name":"Cation:K","type":"related"},{"name":"Replacement of proton by potassium","type":"related"}],"termid":"MOD:01244"}


id: GO:0033706
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: L-quinate + NAD(P)+ = 3-dehydroquinate + NAD(P)H + H+, and shikimate + NAD(P)+ = 3-dehydroshikimate + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.282"],"gene_count":0,"genotype_count":0,"name":"obsolete quinate/shikimate dehydrogenase activity (obsolete GO:0033706)","synonyms":[{"name":"L-quinate:NAD(P)+ 3-oxidoreductase activity","type":"related"},{"name":"YdiB","type":"related"},{"name":"quinate/shikimate dehydrogenase activity","type":"exact"}],"termid":"GO:0033706"}


id: PBO:0002163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPR repeats","termid":"PBO:0002163"}


