# terms

id: PBO:0003694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mdm10/Mdm12/Mmm1 complex subunit Mdm12","termid":"PBO:0003694"}


id: PBO:0062044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 29","termid":"PBO:0062044"}


id: PBO:0046944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 72 member A","termid":"PBO:0046944"}


id: GO:0030441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mcc"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKKK during sporulation (sensu Fungi) (obsolete GO:0030441)","synonyms":[{"name":"activation of MAPKKK during sporulation (sensu Fungi)","type":"exact"}],"termid":"GO:0030441"}


id: PBO:0028619
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_U1_snRNP_binding","termid":"PBO:0028619"}


id: PBO:0063281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily A, 7","termid":"PBO:0063281"}


id: PBO:0061089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK2 homeobox 8","termid":"PBO:0061089"}


id: PBO:0079179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 8","termid":"PBO:0079179"}


id: GO:0032079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endodeoxyribonuclease activity, the hydrolysis of ester linkages within deoxyribonucleic acid by creating internal breaks.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endodeoxyribonuclease activity","termid":"GO:0032071"},{"relation_name":"is_a","term_name":"positive regulation of deoxyribonuclease activity","termid":"GO:0032077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of endodeoxyribonuclease activity","synonyms":[{"name":"activation of endodeoxyribonuclease activity","type":"narrow"},{"name":"endodeoxyribonuclease activator","type":"related"},{"name":"stimulation of endodeoxyribonuclease activity","type":"narrow"},{"name":"up regulation of endodeoxyribonuclease activity","type":"exact"},{"name":"up-regulation of endodeoxyribonuclease activity","type":"exact"},{"name":"upregulation of endodeoxyribonuclease activity","type":"exact"}],"termid":"GO:0032079"}


id: FYPO:0003011
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is increased.","definition_xrefs":["PMID:23936074","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"},{"relation_name":"is_a","term_name":"increased protein localization to chromosome during vegetative growth","termid":"FYPO:0002840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to chromatin during vegetative growth","synonyms":[{"name":"increased protein localisation to chromatin","type":"exact"},{"name":"increased protein localization to chromatin during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003011"}


id: GO:0005549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an odorant, any substance capable of stimulating the sense of smell.","definition_xrefs":["ISBN:0721662544","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"odorant binding","termid":"GO:0005549"}


id: GO:0052559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont activates the immune response of the host organism; the immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host immune response (obsolete GO:0052559)","synonyms":[{"name":"activation by symbiont of host immune response","type":"exact"},{"name":"induction by organism of immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by organism of immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of host immune response","type":"related"},{"name":"stimulation by symbiont of host immune response","type":"related"},{"name":"up regulation by symbiont of host immune response","type":"related"},{"name":"up-regulation by symbiont of host immune response","type":"related"},{"name":"upregulation by symbiont of host immune response","type":"exact"}],"termid":"GO:0052559"}


id: GO:0018301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into an iron-sulfur cluster by tris-L-cysteinyl-L-cysteine persulfido-bis-L-glutamato-L-histidino tetrairon.","definition_xrefs":["RESID:AA0268"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via tris-L-cysteinyl-L-cysteine persulfido-bis-L-glutamato-L-histidino tetrairon (obsolete GO:0018301)","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl-L-cysteine persulphido-bis-L-glutamato-L-histidino tetrairon","type":"exact"}],"termid":"GO:0018301"}


id: GO:0010195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of microRNA, a large family of 21-22 nucleotide non-coding RNAs with presumed post-transcriptional regulatory activity.","definition_xrefs":["GOC:sm"],"gene_count":0,"genotype_count":0,"name":"obsolete microRNA biosynthetic process (obsolete GO:0010195)","synonyms":[{"name":"miRNA biosynthesis","type":"exact"},{"name":"miRNA biosynthetic process","type":"exact"},{"name":"microRNA anabolism","type":"exact"},{"name":"microRNA biosynthesis","type":"exact"},{"name":"microRNA biosynthetic process","type":"exact"},{"name":"microRNA formation","type":"exact"},{"name":"microRNA synthesis","type":"exact"}],"termid":"GO:0010195"}


id: GO:1902760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of Mo(VI)-molybdopterin cytosine dinucleotide.","definition_xrefs":["GO_REF:0000068","PMID:23201473","GOC:dph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mo-molybdopterin cofactor biosynthetic process","termid":"GO:0006777"},{"relation_name":"is_a","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"},{"relation_name":"is_a","term_name":"Mo(VI)-molybdopterin cytosine dinucleotide metabolic process","termid":"GO:1902759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"Mo(VI)-molybdopterin cytosine dinucleotide biosynthetic process","secondary_identifiers":["GO:0061601","MetaCyc:PWY-6476"],"synonyms":[{"name":"Mo(VI)-molybdopterin cytosine dinucleotide anabolism","type":"exact"},{"name":"Mo(VI)-molybdopterin cytosine dinucleotide biosynthesis","type":"exact"},{"name":"Mo(VI)-molybdopterin cytosine dinucleotide formation","type":"exact"},{"name":"Mo(VI)-molybdopterin cytosine dinucleotide synthesis","type":"exact"},{"name":"Mo-molybdopterin-cytosine-dinucleotide cofactor biosynthetic process","type":"exact"}],"termid":"GO:1902760"}


id: PBO:0063595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 10","termid":"PBO:0063595"}


id: PBO:0031254
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_spindle_assembly","termid":"PBO:0031254"}


id: GO:0034609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Insertion of the male copulatory spicules into the hermaphrodite. Spicule insertion behavior initiates when the male cloaca contacts the vulva. During most mating encounters, the spicule tips will prod the vulva continuously until they partially penetrate, which then causes the protractors to contract completely so that the spicules extend through the vulva.","definition_xrefs":["PMID:18050467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male mating behavior","termid":"GO:0060179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spicule insertion","termid":"GO:0034609"}


id: PBO:0045041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dickkopf WNT signaling pathway inhibitor 1","termid":"PBO:0045041"}


id: GO:0006177
data:
  {"annotated_genes":["SJAG_00964","SJAG_04634","SJAG_06634","SJAG_01298"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59003,97263,104341],"is_not":false,"summary":null,"term":"GO:0006177"},{"annotations":[89821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GMP, guanosine monophosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate biosynthetic process","termid":"GO:0009168"},{"relation_name":"is_a","term_name":"GMP metabolic process","termid":"GO:0046037"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00964":null,"SJAG_01298":null,"SJAG_04634":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"GMP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"GMP anabolism","type":"exact"},{"name":"GMP biosynthesis","type":"exact"},{"name":"GMP formation","type":"exact"},{"name":"GMP synthesis","type":"exact"}],"termid":"GO:0006177","terms_by_termid":{"GO:0006177":null,"GO:0032263":null}}


id: GO:1902484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a Sertoli cell.","definition_xrefs":["GOC:ic","PMID:17761895","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell apoptotic process","termid":"GO:1904019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Sertoli cell apoptotic process","synonyms":[{"name":"Sertoli cell apoptosis","type":"narrow"}],"termid":"GO:1902484"}


id: PBO:0067891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 193","termid":"PBO:0067891"}


id: PBO:0068546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 152, pseudogene","termid":"PBO:0068546"}


id: GO:0004400
data:
  {"annotated_genes":["SJAG_03055"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98381],"is_not":false,"summary":null,"term":"GO:0004400"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-histidinol-phosphate + 2-oxoglutarate = 3-(imidazol-4-yl)-2-oxopropyl phosphate + L-glutamate.","definition_xrefs":["EC:2.6.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03055":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016769","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"histidinol-phosphate transaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:23744","MetaCyc:HISTAMINOTRANS-RXN"],"synonyms":[{"name":"IAP transaminase activity","type":"related"},{"name":"L-histidinol phosphate aminotransferase activity","type":"related"},{"name":"L-histidinol-phosphate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"glutamic-imidazoleacetol phosphate transaminase activity","type":"related"},{"name":"histidine:imidazoleacetol phosphate transaminase activity","type":"related"},{"name":"histidinol phosphate aminotransferase activity","type":"related"},{"name":"histidinol-phosphate aminotransferase activity","type":"exact"},{"name":"imidazole acetol-phosphate transaminase activity","type":"related"},{"name":"imidazoleacetol phosphate transaminase activity","type":"related"},{"name":"imidazolylacetolphosphate aminotransferase activity","type":"related"},{"name":"imidazolylacetolphosphate transaminase activity","type":"related"}],"termid":"GO:0004400","terms_by_termid":{"GO:0004400":null}}


id: PBO:0086532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; not conserved in closely related Saccharomyces species; 98% of ORF overlaps the verified gene MID2","termid":"PBO:0086532"}


id: PBO:0042411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 25A","termid":"PBO:0042411"}


id: GO:1900410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of histone modification.","definition_xrefs":["GOC:mah","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone modification by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900410)","termid":"GO:1900410"}


id: PBO:0067635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 808, pseudogene","termid":"PBO:0067635"}


id: GO:1901785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of p-cresol.","definition_xrefs":["UniPathway:UPA00708","PMID:10623531","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cresol catabolic process","termid":"GO:0046199"},{"relation_name":"is_a","term_name":"p-cresol metabolic process","termid":"GO:1901784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"p-cresol catabolic process","synonyms":[{"name":"p-cresol breakdown","type":"exact"},{"name":"p-cresol catabolism","type":"exact"},{"name":"p-cresol degradation","type":"exact"}],"termid":"GO:1901785"}


id: SO:0000486
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of the 5' exon preceding the start codon.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"noncoding_region_of_exon","termid":"SO:0001214"},{"relation_name":"part_of","term_name":"five_prime_coding_exon","termid":"SO:0000200"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_coding_exon_noncoding_region","synonyms":[{"name":"five prime coding exon noncoding region","type":"exact"},{"name":"five_prime_exon_noncoding_region","type":"exact"}],"termid":"SO:0000486"}


id: GO:0018858
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + benzoate + CoA = AMP + benzoyl-CoA + diphosphate.","definition_xrefs":["RHEA:10132","EC:6.2.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"benzoate-CoA ligase activity","secondary_identifiers":["MetaCyc:BENZOATE--COA-LIGASE-RXN","KEGG_REACTION:R01422","UM-BBD_reactionID:r0189"],"synonyms":[{"name":"benzoate-coenzyme A ligase activity","type":"related"},{"name":"benzoate:CoA ligase (AMP-forming)","type":"related"},{"name":"benzoyl CoA synthetase (AMP forming)","type":"related"},{"name":"benzoyl-coenzyme A synthetase activity","type":"related"}],"termid":"GO:0018858"}


id: GO:0050825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ice, water reduced to the solid state by cold temperature. It is a white or transparent colorless substance, crystalline, brittle, and viscoidal.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ice binding","synonyms":[{"name":"antifreeze activity","type":"related"},{"name":"ice crystal binding","type":"exact"},{"name":"ice nucleation activity","type":"related"},{"name":"ice nucleation inhibitor activity","type":"related"}],"termid":"GO:0050825"}


id: PBO:0061132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMD3 ribosome export adaptor pseudogene 2","termid":"PBO:0061132"}


id: GO:0002055
data:
  {"annotated_genes":["SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89602],"is_not":false,"summary":null,"term":"GO:0002055"}]},"cv_name":"molecular_function","definition":"Binding to adenine, a purine base.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase binding","termid":"GO:0002060"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"adenine binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"6-aminopurine binding","type":"exact"}],"termid":"GO:0002055","terms_by_termid":{"GO:0002055":null}}


id: PBO:0016577
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana XCT","termid":"PBO:0016577"}


id: PBO:0089011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear export signal receptor Crm1","termid":"PBO:0089011"}


id: SO:0002007
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An MNV is a multiple nucleotide variant (substitution) in which the inserted sequence is the same length as the replaced sequence.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substitution","termid":"SO:1000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MNV","synonyms":[{"name":"multiple nucleotide substitution","type":"exact"},{"name":"multiple nucleotide variant","type":"exact"}],"termid":"SO:0002007"}


id: PBO:0039972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 4A pseudogene 3","termid":"PBO:0039972"}


id: PBO:0040696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branched chain keto acid dehydrogenase E1 subunit beta","termid":"PBO:0040696"}


id: GO:2000848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of corticosteroid hormone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid hormone secretion","termid":"GO:2000833"},{"relation_name":"is_a","term_name":"regulation of corticosteroid hormone secretion","termid":"GO:2000846"},{"relation_name":"positively_regulates","term_name":"corticosteroid hormone secretion","termid":"GO:0035930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of corticosteroid hormone secretion","synonyms":[{"name":"positive regulation of corticosteroid secretion","type":"related"}],"termid":"GO:2000848"}


id: PBO:0039001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin filament associated protein 1 like 2","termid":"PBO:0039001"}


id: PBO:0108973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule inner protein 4","termid":"PBO:0108973"}


id: PBO:0027218
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cytosolic_half-mer_polysome_level","termid":"PBO:0027218"}


id: PBO:0059194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member X1","termid":"PBO:0059194"}


id: PBO:0109648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XG Y-linked 1 (pseudogene)","termid":"PBO:0109648"}


id: PR:O74345
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ucp3 gene.","definition_xrefs":["UniProtKB:O74345","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain-containing protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21D10.05c","synonyms":[{"name":"Spom972h-ucp3","type":"exact"}],"termid":"PR:O74345"}


id: PBO:0042536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDK5 regulatory subunit associated protein 3","termid":"PBO:0042536"}


id: PBO:0063058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PITX2 adjacent non-coding RNA","termid":"PBO:0063058"}


id: PR:Q10093
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11D3.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.14c","synonyms":[{"name":"Spom972h-SPAC11D3.14c","type":"exact"}],"termid":"PR:Q10093"}


id: PR:Q92368
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell differentiation protein RCD1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02251","PANTHER:PTHR12262:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell differentiation protein rcd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.06c","secondary_identifiers":["UniProtKB:Q92368"],"synonyms":[{"name":"Spom972h-RQCD1","type":"exact"}],"termid":"PR:Q92368"}


id: GO:0018271
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + biotin + protein = AMP + diphosphate + biotin-protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete biotin-protein ligase activity (obsolete GO:0018271)","synonyms":[{"name":"biotin-apoprotein ligase activity","type":"exact"}],"termid":"GO:0018271"}


id: PBO:0069030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 275, pseudogene","termid":"PBO:0069030"}


id: FYPO:0007936
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the number of sites of  DNA breakpoint junctions is greater than normal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased DNA damage","termid":"FYPO:0003546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased number of DNA breakpoint junctions","termid":"FYPO:0007936"}


id: PBO:0073710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKI family transcriptional corepressor 1","termid":"PBO:0073710"}


id: GO:0030204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving chondroitin sulfate, any member of a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues, the repeat units of which consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate. They usually occur linked to a protein to form proteoglycans. Two subgroups exist, one in which the sulfate is on the 4-position (chondroitin sulfate A) and the second in which it is in the 6-position (chondroitin sulfate C). They often are polydisperse and often differ in the degree of sulfation from tissue to tissue. The chains of repeating disaccharide are covalently linked to the side chains of serine residues in the polypeptide backbone of a protein by a glycosidic attachment through the trisaccharide unit galactosyl-galactosyl-xylosyl. Chondroitin sulfate B is more usually known as dermatan sulfate.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"mucopolysaccharide metabolic process","termid":"GO:1903510"},{"relation_name":"part_of","term_name":"chondroitin sulfate proteoglycan metabolic process","termid":"GO:0050654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"chondroitin sulfate metabolic process","synonyms":[{"name":"chondroitin sulfate metabolism","type":"exact"},{"name":"chondroitin sulphate metabolic process","type":"exact"},{"name":"chondroitin sulphate metabolism","type":"exact"}],"termid":"GO:0030204"}


id: PR:O36016
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ypa1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O36016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein phosphatase 2A activator 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.04","synonyms":[{"name":"PPIase PTPA-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ypa1","type":"exact"},{"name":"peptidyl-prolyl cis-trans isomerase PTPA-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"phosphotyrosyl phosphatase activator 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"rotamase PTPA-1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O36016"}


id: PBO:0049827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDGF like 2","termid":"PBO:0049827"}


id: PBO:0082263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aminolevulinate dehydratase; a homo-octameric enzyme, catalyzes the conversion of 5-aminolevulinate to porphobilinogen, the second step in heme biosynthesis; enzymatic activity is zinc-dependent; localizes to the cytoplasm and nucleus; human homolog ALAD can complement yeast hem2 mutant","termid":"PBO:0082263"}


id: PBO:0086024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; transcript accumulates in response to any combination of stress conditions","termid":"PBO:0086024"}


id: GO:0120091
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the hydroxylation of jasmonic acid to 12OH-jasmonic acid.","definition_xrefs":["PMID:28559313","PMID:28760569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"jasmonic acid hydrolase","synonyms":[{"name":"2-oxoglutarate dioxygenase","type":"broad"}],"termid":"GO:0120091"}


id: GO:0007212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by a dopamine binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["PMID:36757901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"part_of","term_name":"cellular response to dopamine","termid":"GO:1903351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"G protein-coupled dopamine receptor signaling pathway","synonyms":[{"name":"dopamine receptor signalling pathway","type":"broad"}],"termid":"GO:0007212"}


id: PBO:0033823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic APC activator Mfr1","termid":"PBO:0033823"}


id: PBO:0001285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle subunit Srp21 (predicted)","termid":"PBO:0001285"}


id: GO:0140561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + [protein with EGF-like domain]-L-serine = UDP + [protein with EGF-like domain]-3-O-(beta-D-glucosyl)-L-serine.","definition_xrefs":["RHEA:58116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"EGF-domain serine glucosyltransferase activity","secondary_identifiers":["EC:2.4.1.376"],"termid":"GO:0140561"}


id: PBO:0090484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine synthase reductase","termid":"PBO:0090484"}


id: PR:Q10284
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sks2 gene.","definition_xrefs":["UniProtKB:Q10284","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein sks2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.05","synonyms":[{"name":"Spom972h-sks2","type":"exact"},{"name":"heat shock cognate protein hsc1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10284"}


id: GO:0009784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a signal and transmitting the signal from one side of a membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-histidine = ADP + a protein-L-histidine phosphate.","definition_xrefs":["GOC:lr","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein histidine kinase activity","termid":"GO:0004673"},{"relation_name":"is_a","term_name":"transmembrane receptor protein kinase activity","termid":"GO:0019199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003824","GO:0003674","GO:0004672","GO:0016740","GO:0140096","GO:0016301"],"is_obsolete":false,"name":"transmembrane receptor histidine kinase activity","termid":"GO:0009784"}


id: PBO:0027475
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_age-related_vacuolar_changes","termid":"PBO:0027475"}


id: GO:0140501
data:
  {"annotated_genes":["SJAG_04435"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85596],"is_not":false,"summary":null,"term":"GO:0140501"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of reticulophagy.","definition_xrefs":["PMID:32735772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"positive regulation of macroautophagy","termid":"GO:0016239"},{"relation_name":"is_a","term_name":"regulation of reticulophagy","termid":"GO:0140500"},{"relation_name":"positively_regulates","term_name":"reticulophagy","termid":"GO:0061709"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04435":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0006914","GO:0008150"],"is_obsolete":false,"name":"positive regulation of reticulophagy","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of ER autophagy","type":"exact"},{"name":"positive regulation of ER degradation","type":"related"},{"name":"positive regulation of ER-phagy","type":"exact"},{"name":"positive regulation of autophagy of the ER","type":"exact"},{"name":"positive regulation of autophagy of the endoplasmic reticulum","type":"exact"},{"name":"positive regulation of endoplasmic reticulum autophagy","type":"exact"},{"name":"positive regulation of endoplasmic reticulum degradation","type":"related"}],"termid":"GO:0140501","terms_by_termid":{"GO:0140501":null}}


id: FYPO:0001055
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype in which a cell enters mitosis normally, in that the spindle forms normally and chromosomes condense normally, but then undergoes septation despite abnormal chromosome segregation, giving rise to a cut phenotype.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cut","termid":"FYPO:0000229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000032","FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0000641","FYPO:0000004","FYPO:0001985","FYPO:0000337"],"is_obsolete":false,"name":"cut following normal mitotic chromosome condensation","synonyms":[{"name":"cut following normal chromosome condensation during mitotic cell cycle","type":"exact"},{"name":"cut following normal entry into mitosis","type":"related"},{"name":"cut following normal mitotic chromosome condensation during vegetative growth","type":"exact"},{"name":"cut following normal mitotic entry","type":"related"},{"name":"cut with normal mitotic chromosome condensation","type":"exact"},{"name":"septation following abnormal mitotic chromosome segregation, with normal chromosome condensation","type":"exact"}],"termid":"FYPO:0001055"}


id: PBO:0091495
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae HAL3","termid":"PBO:0091495"}


id: PBO:0090519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen decarboxylase Hem12","termid":"PBO:0090519"}


id: GO:0031085
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex required for the biogenesis of specialized organelles of the endosomal-lysosomal system, such as melanosomes and platelet dense granules. The human complex contains the Hps1 and Hps4 proteins.","definition_xrefs":["PMID:12756248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BLOC complex","termid":"GO:0031082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"BLOC-3 complex","termid":"GO:0031085"}


id: FYPO:0007175
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plasma membrane surrounding the cell division site is abolished during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to plasma membrane at cell division site during vegetative growth","termid":"FYPO:0006936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to plasma membrane at cell division site during mitotic interphase","synonyms":[{"name":"abolished protein localisation to plasma membrane at cell division site during mitotic interphase","type":"exact"},{"name":"abolished protein localization in plasma membrane at cell division site during mitotic interphase","type":"exact"},{"name":"abolished protein localization to cell membrane at cell division site during mitotic interphase","type":"exact"},{"name":"abolished protein localization to plasma membrane at cell division site during interphase during vegetative growth","type":"exact"},{"name":"abolished protein localization to plasma membrane at cell division site during interphase of mitotic cell cycle","type":"exact"},{"name":"protein localization to plasma membrane at cell division site abolished during mitotic interphase","type":"exact"}],"termid":"FYPO:0007175"}


id: PBO:0076601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1D22A antisense RNA 1","termid":"PBO:0076601"}


id: PBO:0025445
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine-pyrimidine metabolism disorders","termid":"PBO:0025445"}


id: PR:O13984
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A replication-associated recombination protein A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01708","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase WRNIP1 homolog C26H5.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.02c","secondary_identifiers":["UniProtKB:O13984"],"synonyms":[{"name":"Spom972h-rarA","type":"exact"}],"termid":"PR:O13984"}


id: PBO:0058388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4760","termid":"PBO:0058388"}


id: PATO:0002331
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer exhibiting molecular attraction to another entity in contact.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesivity","termid":"PATO:0001431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesive","synonyms":[{"name":"resinous","type":"related"}],"termid":"PATO:0002331"}


id: GO:0035348
data:
  {"annotated_genes":["SJAG_04325"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102764],"is_not":false,"summary":null,"term":"GO:0035348"}]},"cv_name":"biological_process","definition":"The process in which acetyl-CoA is transported across a membrane. Acetyl-CoA is a derivative of coenzyme A in which the sulfhydryl group is acetylated; it is a metabolite derived from several pathways (e.g. glycolysis, fatty acid oxidation, amino-acid catabolism) and is further metabolized by the tricarboxylic acid cycle. It is a key intermediate in lipid and terpenoid biosynthesis.","definition_xrefs":["GO:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetyl-CoA transport","termid":"GO:0015876"},{"relation_name":"is_a","term_name":"adenosine 3',5'-bisphosphate transmembrane transport","termid":"GO:0071106"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"acetyl-CoA transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"acetyl-CoA membrane transport","type":"exact"}],"termid":"GO:0035348","terms_by_termid":{"GO:0035348":null}}


id: PBO:0090910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-serine ammonia-lyase activity","termid":"PBO:0090910"}


id: PBO:0073407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 10","termid":"PBO:0073407"}


id: SO:0002175
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An insertion that is the result of base-calling or assembly error.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration_artifact","termid":"SO:0002172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertion_artifact","synonyms":[{"name":"insertion artifact","type":"exact"}],"termid":"SO:0002175"}


id: PBO:0004108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit Orc1","termid":"PBO:0004108"}


id: GO:1900076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to insulin stimulus.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cellular response to insulin stimulus","termid":"GO:0032869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to insulin stimulus","termid":"GO:1900076"}


id: MOD:01917
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-aspartic acid residue and an L-lysine residue by an isopeptide bond with the formation of N6-(L-isoaspartyl)-L-lysine and the release of water.","definition_xrefs":["PubMed:18063798","PubMed:15044436","RESID:AA0294#ASP","PubMed:6503713","ChEBI:21862","PubMed:11000116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-(L-isoaspartyl)-L-lysine","termid":"MOD:01929"},{"relation_name":"is_a","term_name":"crosslinked L-aspartic acid residue","termid":"MOD:02043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-(L-isoaspartyl)-L-lysine (Asp)","synonyms":[{"name":"(2S)-2-amino-6-([(3S)-3-amino-3-carboxypropanoyl]amino)hexanoic acid","type":"exact"},{"name":"CROSSLNK Isoaspartyl lysine isopeptide (Lys-Asn)","type":"exact"},{"name":"N(epsilon)-(beta-aspartyl)lysine","type":"exact"},{"name":"N6-(L-isoaspartyl)-L-lysine","type":"exact"},{"name":"XLNK-4Asp-N6Lys(Asp)","type":"exact"},{"name":"beta-(N6-lysyl)aspartyl acid","type":"exact"},{"name":"isoaspartyl N6-lysine","type":"exact"}],"termid":"MOD:01917"}


id: GO:0004986
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with an opioid to initiate a change in cell activity, with the pharmacological characteristics of delta-opioid receptors, including the activity of enkephalins as ligands.","definition_xrefs":["IUPHAR_RECEPTOR:317","PMID:10471416"],"gene_count":0,"genotype_count":0,"name":"obsolete delta-opioid receptor activity (obsolete GO:0004986)","secondary_identifiers":["Wikipedia:Delta_Opioid_receptor"],"synonyms":[{"name":"delta-opioid receptor activity","type":"exact"}],"termid":"GO:0004986"}


id: PBO:0089118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic spindle pole body KASH domain protein Kms1","termid":"PBO:0089118"}


id: PBO:0088722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA demethylase","termid":"PBO:0088722"}


id: PBO:0050596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxy-delta-5-steroid dehydrogenase, 3 beta, pseudogene 1","termid":"PBO:0050596"}


id: GO:0170020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a specific odorant has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:21857978","PMID:24661599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"olfactory receptor activity","termid":"GO:0004984"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic ion channel activity","termid":"GO:0015276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ionotropic olfactory receptor activity","termid":"GO:0170020"}


id: GO:0097749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A membrane organization process resulting in the formation of a tubular projection. This may face inwardly (as in tubular membrane invaginations) or outwardly (as in endosomal tubules).","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"membrane tubulation","termid":"GO:0097749"}


id: FYPO:0003813
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome positioning is normal (i.e. indistinguishable from wild type) near the promoter regions of genes that are expressed in response to stress. Nucleosome positioning is the ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["PomBase:mah","GO:0016584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nucleosome positioning in euchromatin","termid":"FYPO:0000857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal nucleosome positioning at stress response genes","synonyms":[{"name":"normal nucleosome occupancy at stress response genes","type":"related"},{"name":"normal nucleosome positioning at stress response genes during mitotic cell cycle","type":"related"},{"name":"normal nucleosome positioning at stress response genes during vegetative growth","type":"exact"},{"name":"normal nucleosome spacing at stress response genes","type":"exact"}],"termid":"FYPO:0003813"}


id: FYPO:0005140
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the repair of double-strand breaks formed as part of meiotic recombination does not occur.","definition_xrefs":["PMID:15238514","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination double-strand break repair","termid":"FYPO:0005139"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002","FYPO:0005447","FYPO:0000298","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abolished meiotic recombination double-strand break repair","synonyms":[{"name":"abolished DSB repair involved in reciprocal meiotic recombination","type":"exact"},{"name":"abolished double-strand break repair during meiotic recombination","type":"exact"},{"name":"abolished double-strand break repair involved in reciprocal meiotic recombination","type":"exact"},{"name":"meiotic recombination double-strand break repair abolished","type":"exact"}],"termid":"FYPO:0005140"}


id: GO:0075230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the directed movement of a motile spore on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete spore movement on or near host (obsolete GO:0075230)","termid":"GO:0075230"}


id: FYPO:0004373
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic G2 DNA damage checkpoint is abnormal. The mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the mitotic cell cycle in response to DNA damage. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["PomBase:mah","GO:0007095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA damage checkpoint","termid":"FYPO:0000006"},{"relation_name":"is_a","term_name":"abnormal regulation of G2/M transition of mitotic cell cycle","termid":"FYPO:0000166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0000298","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic G2 DNA damage checkpoint","synonyms":[{"name":"abnormal G2 DNA damage checkpoint during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic G2 DNA damage checkpoint activation","type":"related"},{"name":"abnormal mitotic G2 DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle G2/M transition DNA damage checkpoint","type":"exact"}],"termid":"FYPO:0004373"}


id: FYPO:0008006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton phenotype observed during mitotic interphase in which the microtubule minus ends are dynamic (they alternate between growth and shrinkage phases).","definition_xrefs":["PomBase:mlr","PMID:21444751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule dynamics during vegetative growth","termid":"FYPO:0000901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"dynamic microtubule minus ends in interphase bundles","synonyms":[{"name":"dynamic microtubule minus ends during interphase","type":"broad"},{"name":"uncapped microtubule minus ends during interphase","type":"broad"},{"name":"uncapped microtubule minus ends in interphase bundles","type":"broad"}],"termid":"FYPO:0008006"}


id: PBO:0088643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snoRNA biogenesis protein Bcd1","termid":"PBO:0088643"}


id: PBO:0070681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 52","termid":"PBO:0070681"}


id: PBO:0028506
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_anaerobic_cell_population_growth","termid":"PBO:0028506"}


id: GO:0014055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of acetylcholine by a cell. The acetylcholine acts as a neurotransmitter that acts in both the peripheral nervous system (PNS) and central nervous system (CNS).","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"is_a","term_name":"acetylcholine secretion","termid":"GO:0061526"},{"relation_name":"part_of","term_name":"synaptic transmission, cholinergic","termid":"GO:0007271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"acetylcholine secretion, neurotransmission","termid":"GO:0014055"}


id: GO:0090453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of aspartate into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate transmembrane transport","termid":"GO:0015810"},{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"vacuolar amino acid transmembrane transport","termid":"GO:0034487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"aspartate transmembrane import into vacuole","synonyms":[{"name":"vacuolar aspartate import","type":"exact"}],"termid":"GO:0090453"}


id: PBO:0062978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PABPN1 like, cytoplasmic","termid":"PBO:0062978"}


id: GO:1990074
data:
  {"annotated_genes":["SJAG_02370","SJAG_03876"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91699],"is_not":false,"summary":null,"term":"GO:1990074"},{"annotations":[87727],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a messenger RNA (mRNA) molecule, initiated by the enzymatic addition of a sequence of uridylyl residues (polyuridylation) at the 3' end of the target mRNA.","definition_xrefs":["GOC:vw","PMID:23503588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA catabolic process","termid":"GO:0006402"},{"relation_name":"is_a","term_name":"modification-dependent macromolecule catabolic process","termid":"GO:0043632"},{"relation_name":"is_a","term_name":"mRNA destabilization","termid":"GO:0061157"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02370":null,"SJAG_03876":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"polyuridylation-dependent mRNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990074","terms_by_termid":{"GO:0036450":null,"GO:1990074":null}}


id: PBO:0005098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule-associated protein Dis1","termid":"PBO:0005098"}


id: PBO:0084325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyopherin, responsible for nuclear import of specific proteins; cargoes include Spt15p, Sua7p, histones H2A and H2B, and Nap1p; amino terminus shows similarity to those of other importins, particularly Cse1p; localization is primarily nuclear; function is regulated by sumoylation; protein abundance increases in response to DNA replication stress","termid":"PBO:0084325"}


id: GO:0052545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which callose is transported to, and/or maintained in, a specific location. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.","definition_xrefs":["PMID:18397379","GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide localization","termid":"GO:0033037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"callose localization","synonyms":[{"name":"callose localisation","type":"exact"}],"termid":"GO:0052545"}


id: GO:0016922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear receptor protein. Nuclear receptor proteins are DNA-binding transcription factors which are regulated by binding to a ligand.","definition_xrefs":["PMID:7776974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II-specific DNA-binding transcription factor binding","termid":"GO:0061629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"nuclear receptor binding","secondary_identifiers":["GO:0035257","GO:0035258"],"synonyms":[{"name":"ligand-dependent nuclear receptor binding","type":"exact"},{"name":"ligand-dependent nuclear receptor interactor activity","type":"related"},{"name":"nuclear hormone receptor binding","type":"exact"},{"name":"steroid hormone receptor binding","type":"broad"}],"termid":"GO:0016922"}


id: PBO:0004865
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.2.18","termid":"PBO:0004865"}


id: PBO:0057364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ag-2","termid":"PBO:0057364"}


id: PBO:0049609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 12","termid":"PBO:0049609"}


id: FYPO:0002186
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that have a lower volume than normal. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, small cells (obsolete FYPO:0002186)","synonyms":[{"name":"inviable microcolony, small vegetative cells","type":"exact"}],"termid":"FYPO:0002186"}


id: PR:P23636
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppa2 gene.","definition_xrefs":["UniProtKB:P23636","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major serine/threonine-protein phosphatase PP2A-2 catalytic subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.07c","synonyms":[{"name":"Spom972h-ppa2","type":"exact"}],"termid":"PR:P23636"}


id: PBO:0069164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 416, pseudogene","termid":"PBO:0069164"}


id: FYPO:0002008
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of aconitate hydratase (also known as aconitase) activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal aconitate hydratase activity","termid":"FYPO:0000920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"decreased aconitate hydratase activity","synonyms":[{"name":"decreased aconitase activity","type":"exact"},{"name":"reduced aconitate hydratase activity","type":"exact"}],"termid":"FYPO:0002008"}


id: GO:0048174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that decreases short-term neuronal synaptic plasticity, the ability of neuronal synapses to change in the short-term as circumstances require. Short-term neuronal synaptic plasticity generally involves increasing or decreasing synaptic sensitivity.","definition_xrefs":["GOC:jid","PMID:11891290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of short-term neuronal synaptic plasticity","termid":"GO:0048172"},{"relation_name":"is_a","term_name":"negative regulation of neurogenesis","termid":"GO:0050768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of short-term neuronal synaptic plasticity","synonyms":[{"name":"down regulation of short-term neuronal synaptic plasticity","type":"exact"},{"name":"down-regulation of short-term neuronal synaptic plasticity","type":"exact"},{"name":"downregulation of short-term neuronal synaptic plasticity","type":"exact"},{"name":"inhibition of short-term neuronal synaptic plasticity","type":"narrow"}],"termid":"GO:0048174"}


id: PBO:0062338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily D member 1 pseudogene","termid":"PBO:0062338"}


id: PBO:0089947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TORC2 serine/threonine protein kinase Tor1","termid":"PBO:0089947"}


id: PBO:0061304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPEPPS pseudogene 1","termid":"PBO:0061304"}


id: PBO:0091467
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial Ppr10-Associated protein","termid":"PBO:0091467"}


id: PBO:0065955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD21 cohesin complex component like 1","termid":"PBO:0065955"}


id: PBO:0031142
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-lagging_mitotic_chromosomes","termid":"PBO:0031142"}


id: GO:1902217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in an erythrocyte.","definition_xrefs":["GOC:BHF","PMID:14569084","GOC:TermGenie","GOC:rl","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell apoptotic process","termid":"GO:0033028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"erythrocyte apoptotic process","synonyms":[{"name":"RBC apoptosis","type":"narrow"},{"name":"RBC apoptotic process","type":"exact"},{"name":"erythrocyte apoptosis","type":"narrow"},{"name":"red blood cell apoptosis","type":"narrow"},{"name":"red blood cell apoptotic process","type":"exact"}],"termid":"GO:1902217"}


id: PBO:0062546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily K member 2","termid":"PBO:0062546"}


id: PBO:0070923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 31","termid":"PBO:0070923"}


id: PBO:0002584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zds family protein phosphatase type A regulator Zds1 (predicted)","termid":"PBO:0002584"}


id: PR:O74763
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DDB1- and CUL4-associated factor 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03659","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C17D11.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.08","secondary_identifiers":["UniProtKB:O74763"],"synonyms":[{"name":"Spom972h-DCAF7","type":"exact"}],"termid":"PR:O74763"}


id: PBO:0046616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group S71 member 1, envelope","termid":"PBO:0046616"}


id: PBO:0001293
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mouse Glia Maturation Factor homolog","termid":"PBO:0001293"}


id: PBO:0046699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS2 antisense RNA 1","termid":"PBO:0046699"}


id: PBO:0057479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 598","termid":"PBO:0057479"}


id: PBO:0000378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF221 family protein implicated in Golgi to plasma membrane transport (predicted)","termid":"PBO:0000378"}


id: PBO:0072554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras related GTP binding A","termid":"PBO:0072554"}


id: GO:0071026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The set of processes involved in identifying and degrading defective or aberrant RNAs within the cytoplasm.","definition_xrefs":["GOC:dgf","GOC:krc","PMID:18644474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA surveillance","termid":"GO:0071025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasmic RNA surveillance","synonyms":[{"name":"cytoplasmic RNA quality control","type":"exact"},{"name":"cytoplasmic aberrant RNA catabolic process","type":"exact"}],"termid":"GO:0071026"}


id: FYPO:0005414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during the second meiotic nuclear division is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during meiosis","termid":"FYPO:0003611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"increased protein level during meiosis II","synonyms":[{"name":"increased protein accumulation during meiosis II","type":"related"},{"name":"increased protein level during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0005414"}


id: PBO:0048458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GC-rich sequence DNA-binding factor 2","termid":"PBO:0048458"}


id: PBO:0078536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 28","termid":"PBO:0078536"}


id: FYPO:0008226
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of phosphate (Pi) measured in a cell is higher than normal.","definition_xrefs":["PMID:37949217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular phosphate (Pi) level","termid":"FYPO:0008225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased total cellular phosphate (Pi) level","termid":"FYPO:0008226"}


id: PBO:0082140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Activator of Cbk1p kinase; component of the RAM signaling network that regulates cellular polarity and morphogenesis; activation of Cbk1p facilitates the Ace2p-dependent daughter cell-specific transcription of genes involved in cell separation; similar to Mob1p","termid":"PBO:0082140"}


id: GO:0062132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of L-glutamine biosynthesis.","definition_xrefs":["PMID:19755423","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutamine family amino acid metabolic process","termid":"GO:0000820"},{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of cellular amino acid biosynthetic process","termid":"GO:2000282"},{"relation_name":"regulates","term_name":"L-glutamine biosynthetic process","termid":"GO:1901704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"regulation of L-glutamine biosynthetic process","termid":"GO:0062132"}


id: GO:0160094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of nematode pharynx over time, from its formation to the mature structure.","definition_xrefs":["PMID:18050503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharynx development","termid":"GO:0060465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nematode pharynx development","termid":"GO:0160094"}


id: MOD:01555
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ8plex-116 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-116 reporter+balance reagent acylated residue","termid":"MOD:01549"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-116 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01555"}


id: GO:1904981
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106081"}]},"cv_name":"biological_process","definition":"The process in which maltose is transported across a membrane.","definition_xrefs":["PMID:11136464","GOC:TermGenie","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maltose transport","termid":"GO:0015768"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"maltose transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1904981","terms_by_termid":{"GO:0106081":null}}


id: GO:0047926
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate = (2S)-bornyl diphosphate.","definition_xrefs":["RHEA:18209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0009975"}],"interesting_parent_ids":["GO:0016853","GO:0009975","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"geranyl-diphosphate cyclase activity","secondary_identifiers":["MetaCyc:GERANYL-DIPHOSPHATE-CYCLASE-RXN","EC:5.5.1.8","KEGG_REACTION:R02007"],"synonyms":[{"name":"(+)-bornyl-diphosphate lyase (decyclizing)","type":"related"},{"name":"(+)-bornylpyrophosphate cyclase activity","type":"related"},{"name":"bornyl diphosphate synthase activity","type":"related"},{"name":"bornyl pyrophosphate synthase activity","type":"related"},{"name":"bornyl pyrophosphate synthetase activity","type":"related"}],"termid":"GO:0047926"}


id: PBO:0017680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-xylose 1-dehydrogenase (NADP+) (predicted)","termid":"PBO:0017680"}


id: GO:0045048
data:
  {"annotated_genes":["SJAG_05414","SJAG_01127","SJAG_00064","SJAG_03865","SJAG_03930","SJAG_01782","SJAG_02437","SJAG_00603","SJAG_03315","SJAG_04684","SJAG_00277","SJAG_04294","SJAG_02330","SJAG_02914","SJAG_00959","SJAG_02065","SJAG_02208","SJAG_01940","SJAG_01240","SJAG_01999","SJAG_01223","SJAG_01178"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87307,87724,90897,94122,94437,94664,97261,99592,100553,100851,102231,104380,104468,105403,106471,108331,109926,110469,111175],"is_not":false,"summary":null,"term":"GO:0045048"},{"annotations":[110208,84026,107077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071816"}]},"cv_name":"biological_process","definition":"The process that results in incorporation of a protein into an endoplasmic reticulum (ER) membrane. It depends on specific topogenic sequences of amino acids that ensure that a protein acquires the proper orientation during its insertion into the ER membrane.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into membrane","termid":"GO:0051205"},{"relation_name":"part_of","term_name":"endoplasmic reticulum organization","termid":"GO:0007029"},{"relation_name":"part_of","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00277":null,"SJAG_00603":null,"SJAG_00959":null,"SJAG_01127":null,"SJAG_01178":null,"SJAG_01223":null,"SJAG_01240":null,"SJAG_01782":null,"SJAG_01940":null,"SJAG_01999":null,"SJAG_02065":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02437":null,"SJAG_02914":null,"SJAG_03315":null,"SJAG_03865":null,"SJAG_03930":null,"SJAG_04294":null,"SJAG_04684":null,"SJAG_05414":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein insertion into ER membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"integral ER membrane protein localization","type":"exact"},{"name":"integral ER membrane protein positioning","type":"exact"},{"name":"localization of protein in ER membrane","type":"exact"},{"name":"positioning of protein in ER membrane","type":"exact"},{"name":"protein insertion into endoplasmic reticulum membrane","type":"exact"},{"name":"protein-ER insertion","type":"exact"},{"name":"protein-endoplasmic reticulum insertion","type":"exact"}],"termid":"GO:0045048","terms_by_termid":{"GO:0045048":null,"GO:0071816":null}}


id: GO:0071111
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyclic di-3',5'-guanylate + H2O = 5'-phosphoguanylyl(3'->5')guanosine + H+.","definition_xrefs":["RHEA:24902","EC:3.1.4.52"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cyclic-guanylate-specific phosphodiesterase activity","secondary_identifiers":["KEGG_REACTION:R08991","MetaCyc:RXN0-4181"],"synonyms":[{"name":"PDEA1","type":"related"},{"name":"VieA","type":"related"},{"name":"c-di-GMP phosphodiesterase activity","type":"related"},{"name":"c-di-GMP-specific phosphodiesterase activity","type":"related"},{"name":"cyclic bis(3->5')diguanylate phosphodiesterase activity","type":"related"},{"name":"phosphodiesterase A1 activity","type":"related"}],"termid":"GO:0071111"}


id: PBO:0053136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain binding 3","termid":"PBO:0053136"}


id: PR:O13636
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import inner membrane translocase subunit TIM50 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12210:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim50 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.01c","secondary_identifiers":["UniProtKB:O13636"],"synonyms":[{"name":"Spom972h-TIMM50","type":"exact"},{"name":"pi044","type":"related"}],"termid":"PR:O13636"}


id: FYPO:0003549
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects the localization of a protein in a cell during one or both meiotic nuclear divisions. A protein may be observed in a place where it is not normally found, absent from a place where it is normally found, or both.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiotic cell cycle","termid":"FYPO:0004094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization during meiosis","synonyms":[{"name":"abnormal cellular protein localisation during meiosis","type":"exact"},{"name":"abnormal cellular protein localization during meiosis","type":"exact"},{"name":"abnormal protein localisation during meiosis","type":"exact"},{"name":"abnormal protein localization during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003549"}


id: GO:0097411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by hypoxia-inducible factor (HIF1) in response to lowered oxygen levels (hypoxia). Under hypoxic conditions, the oxygen-sensitive alpha-subunit of hypoxia-inducible factor (HIF)-1 dimerizes with a HIF1-beta subunit (also called ARNT or aryl-hydrocarbon-receptor nuclear translocator), translocates to the nucleus and activates transcription of genes whose products participate in responding to hypoxia.","definition_xrefs":["PMID:26579469","GOC:jc","PMID:16887934","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"},{"relation_name":"part_of","term_name":"cellular response to hypoxia","termid":"GO:0071456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"hypoxia-inducible factor-1alpha signaling pathway","synonyms":[{"name":"HIF1alpha pathway","type":"exact"},{"name":"hypoxia-inducible factor signaling","type":"exact"},{"name":"hypoxia-inducible factor-1alpha signalling pathway","type":"exact"}],"termid":"GO:0097411"}


id: GO:0009338
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes exonucleolytic cleavage (in the presence of ATP) in either 5' to 3' or 3' to 5' direction to yield 5'-phosphooligonucleotides. Exodeoxyribonuclease V shows a preference for double-stranded DNA and possesses DNA-dependent ATPase activity. It acts endonucleolytically on single-stranded circular DNA.","definition_xrefs":["PMID:1618858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"exodeoxyribonuclease V complex","termid":"GO:0009338"}


id: GO:0014708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of somitomeric trunk muscle development.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle organ development","termid":"GO:0048634"},{"relation_name":"regulates","term_name":"somitomeric trunk muscle development","termid":"GO:0002075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of somitomeric trunk muscle development","termid":"GO:0014708"}


id: PBO:0074478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-strand-selective monofunctional uracil-DNA glycosylase 1 pseudogene 1","termid":"PBO:0074478"}


id: GO:0061098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of protein tyrosine kinase activity.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein kinase activity","termid":"GO:0045860"},{"relation_name":"is_a","term_name":"positive regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050731"},{"relation_name":"is_a","term_name":"regulation of protein tyrosine kinase activity","termid":"GO:0061097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein tyrosine kinase activity","termid":"GO:0061098"}


id: GO:0072110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of glomerular mesangial cells, resulting in the expansion of the population.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation involved in kidney development","termid":"GO:0072111"},{"relation_name":"part_of","term_name":"glomerular mesangium development","termid":"GO:0072109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular mesangial cell proliferation","termid":"GO:0072110"}


id: MOD:00549
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["Unimod:196","PubMed:15283597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium tagged reagent","termid":"MOD:01431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APTA d3","synonyms":[{"name":"(3-acrylamidopropyl)trimethylammonium","type":"related"},{"name":"APTA d3","type":"related"},{"name":"QAT:2H(3)","type":"related"}],"termid":"MOD:00549"}


id: PBO:0001074
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Parkinson's disease","termid":"PBO:0001074"}


id: GO:0031717
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cannabinoid receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"cannabinoid receptor binding","synonyms":[{"name":"cannabinoid receptor ligand","type":"narrow"}],"termid":"GO:0031717"}


id: PBO:0074511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A3","termid":"PBO:0074511"}


id: PBO:0010241
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene merge, prl10 was a subsequence of SPNCRNA.1234","termid":"PBO:0010241"}


id: PBO:0090188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar sorting protein Vps68","termid":"PBO:0090188"}


id: PBO:0034207
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-intercellular_endoparasite_of","termid":"PBO:0034207"}


id: GO:0009453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates.","definition_xrefs":["PMID:11029423","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taxis","termid":"GO:0042330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"energy taxis","synonyms":[{"name":"energytaxis","type":"exact"},{"name":"taxis in response to energy source","type":"exact"}],"termid":"GO:0009453"}


id: PBO:0051269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa deleting element or like","termid":"PBO:0051269"}


id: FYPO:0006558
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septum disassembly does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abolished cell separation after cytokinesis","termid":"FYPO:0006557"},{"relation_name":"is_a","term_name":"abnormal septum disassembly","termid":"FYPO:0000132"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished septum disassembly","synonyms":[{"name":"abolished primary cell septum disassembly","type":"related"},{"name":"abolished primary septum disassembly","type":"exact"},{"name":"abolished septum disassembly during mitotic cell cycle","type":"related"},{"name":"abolished septum disassembly during vegetative growth","type":"exact"},{"name":"septum disassembly abolished","type":"exact"}],"termid":"FYPO:0006558"}


id: PBO:0072209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 8","termid":"PBO:0072209"}


id: PBO:0064948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PML-RARA regulated adaptor molecule 1","termid":"PBO:0064948"}


id: PR:O59799
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- coa4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain-containing protein C550.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC550.01c","synonyms":[{"name":"Spom972h-coa4","type":"exact"}],"termid":"PR:O59799"}


id: PBO:0087373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SR protein kinase (SRPK); involved in mRNA 3' splice site recognition with Prp8p and Cdc40p; phosphorylates one or more SR dipeptides on mRNA export factors Npl3p and Gbp2p to stimulate cytoplasmic release of mRNA and Mtr10p-mediated nuclear reimport; component of stress granules that regulates granule disassembly during recovery from stress; modulates cation uptake and homeostasis through membrane transporters; contains prion-like domains; similar to human SRPK1","termid":"PBO:0087373"}


id: SO:0000110
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Any extent of continuous biological sequence.","definition_xrefs":["SO:ke","LAMHDI:mb"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_feature","synonyms":[{"name":"INSDC_feature:misc_feature","type":"exact"},{"name":"INSDC_note:other","type":"exact"},{"name":"INSDC_note:sequence_feature","type":"exact"},{"name":"located sequence feature","type":"related"},{"name":"located_sequence_feature","type":"exact"},{"name":"sequence feature","type":"exact"}],"termid":"SO:0000110"}


id: GO:0015835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of peptidoglycans, a class of glycoconjugates found in bacterial cell walls, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"peptidoglycan transport","synonyms":[{"name":"murein transport","type":"exact"}],"termid":"GO:0015835"}


id: PBO:0017036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug98","termid":"PBO:0017036"}


id: GO:0044809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 17 (CCL17) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 17 production","synonyms":[{"name":"CCL17 production","type":"exact"},{"name":"TARC production","type":"exact"},{"name":"thymus and activation regulated chemokine production","type":"exact"}],"termid":"GO:0044809"}


id: GO:0046217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving indole phytoalexins, any indole compound produced by plants as part of their defense response.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole-containing compound metabolic process","termid":"GO:0042430"},{"relation_name":"is_a","term_name":"phytoalexin metabolic process","termid":"GO:0052314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"indole phytoalexin metabolic process","synonyms":[{"name":"indole phytoalexin metabolism","type":"exact"}],"termid":"GO:0046217"}


id: GO:0010690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the synthesis of RNA from ribosomal protein genes by RNA polymerase II, originating at an RNA polymerase II promoter, as a result of a disturbance in organismal or cellular homeostasis.","definition_xrefs":["GOC:dph","GOC:tb","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ribosomal protein gene transcription by RNA polymerase II","termid":"GO:0010688"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0006355","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to stress","termid":"GO:0010690"}


id: PR:Q9USG9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tyrosyl-DNA phosphodiesterase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12415:SF0","OMA:SCHPO04352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosyl-DNA phosphodiesterase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.05","secondary_identifiers":["UniProtKB:Q9USG9"],"synonyms":[{"name":"Spom972h-TDP1","type":"exact"},{"name":"Tyr-DNA phosphodiesterase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USG9"}


id: GO:0006808
data:
  {"annotated_genes":["SJAG_04268","SJAG_03319"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84919,109918],"is_not":false,"summary":null,"term":"GO:0006808"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nitrogen utilization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"regulates","term_name":"nitrogen utilization","termid":"GO:0019740"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03319":null,"SJAG_04268":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nitrogen utilization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006808","terms_by_termid":{"GO:0006808":null}}


id: GO:0034657
data:
  {"annotated_genes":["SJAG_04309","SJAG_03385","SJAG_01886","SJAG_01472","SJAG_01678","SJAG_02197","SJAG_01637"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84373,91144,92678,93469,97940,103936,110330],"is_not":false,"summary":null,"term":"GO:0034657"}]},"cv_name":"cellular_component","definition":"A protein complex with ubiquitin ligase activity that, in Saccharomyces cerevisiae, is involved in proteasomal degradation of fructose-1,6-bisphosphatase (FBPase) and phosphoenolpyruvate carboxykinase during the transition from gluconeogenic to glycolytic growth conditions. It appears to play a broader role in cellular homeostasis and development in other species.","definition_xrefs":["PMID:35682545","PMID:12686616","PMID:18508925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01472":null,"SJAG_01637":null,"SJAG_01678":null,"SJAG_01886":null,"SJAG_02197":null,"SJAG_03385":null,"SJAG_04309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"GID complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"C-terminal to LisH complex","type":"exact"},{"name":"CTLH complex","type":"exact"}],"termid":"GO:0034657","terms_by_termid":{"GO:0034657":null}}


id: SO:0001907
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes the extension of a genomic feature, with regard to the reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_variant","termid":"SO:0001878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_elongation","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"VEP:feature_elongation","type":"exact"},{"name":"feature elongation","type":"exact"}],"termid":"SO:0001907"}


id: GO:0098948
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic specialization membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of postsynaptic specialization membrane (obsolete GO:0098948)","synonyms":[{"name":"intrinsic to postsynaptic specialization membrane","type":"narrow"}],"termid":"GO:0098948"}


id: GO:0071848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any TNFSF11-mediated signaling process that increases the rate, frequency, or extent of the ERK1 and ERK2 cascade.","definition_xrefs":["GOC:BHF","PMID:18606301"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ERK1 and ERK2 cascade via TNFSF11-mediated signaling (obsolete GO:0071848)","synonyms":[{"name":"positive regulation of ERK1 and ERK2 cascade via RANKL-mediated signaling","type":"exact"},{"name":"positive regulation of ERK1 and ERK2 cascade via TNFSF11-mediated signalling","type":"exact"}],"termid":"GO:0071848"}


id: PBO:0051017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor 2 mRNA binding protein 3","termid":"PBO:0051017"}


id: GO:0071388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cortisone stimulus. Cortisone is a natural glucocorticoid steroid hormone that is metabolically convertible to cortisol. Cortisone is synthesized from cholesterol in the cortex of the adrenal gland under the stimulation of adrenocorticotropin hormone (ACTH). The main physiological effect of cortisone is on carbohydrate metabolism; it can stimulate increased glucose release from the liver, increased liver glycogen synthesis, and decreased utilization of glucose by the tissues.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cortisone","termid":"GO:0051413"},{"relation_name":"is_a","term_name":"cellular response to glucocorticoid stimulus","termid":"GO:0071385"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cortisone stimulus","termid":"GO:0071388"}


id: FYPO:0004042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell forms pieces of a septum rather than a septum that completely bisects the cell.","definition_xrefs":["PomBase:mah","PMID:21931816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete septum","termid":"FYPO:0005870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000032","FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"fragmented septum","synonyms":[{"name":"fragmented septum during mitotic cell cycle","type":"related"},{"name":"fragmented septum during vegetative growth","type":"exact"}],"termid":"FYPO:0004042"}


id: PBO:0060155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-RNR2 like 3 (pseudogene)","termid":"PBO:0060155"}


id: PBO:0016061
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae XRN1","termid":"PBO:0016061"}


id: GO:0052596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenylethylamine + O2 + H2O = phenylacetaldehyde + NH3 + hydrogen peroxide + H+.","definition_xrefs":["RHEA:25265"],"gene_count":0,"genotype_count":0,"name":"obsolete phenethylamine:oxygen oxidoreductase (deaminating) activity (obsolete GO:0052596)","termid":"GO:0052596"}


id: PBO:0004559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Noc2p-Noc3p complex subunit Noc3 (predicted)","termid":"PBO:0004559"}


id: PBO:0065715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PVR related immunoglobulin domain containing 2, pseudogene","termid":"PBO:0065715"}


id: GO:0005631
data:
  {"annotated_genes":["SJAG_03013"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87825],"is_not":false,"summary":null,"term":"GO:0005631"}]},"cv_name":"cellular_component","definition":"The second outermost layer of the spore wall, as described in Saccharomyces.","definition_xrefs":["ISBN:0879693568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ascospore wall","termid":"GO:0005619"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03013":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"chitosan layer of spore wall","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005631","terms_by_termid":{"GO:0005631":null}}


id: PBO:0091904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf6 (frameshifted)","termid":"PBO:0091904"}


id: PBO:0087328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sorting factor, central regulator of spatial protein quality control; physically and functionally interacts with chaperones to promote sorting and deposition of misfolded proteins into cytosolic compartments; involved in destabilization of [URE3] prions; CUR1 has a paralog, BTN2, that arose from the whole genome duplication","termid":"PBO:0087328"}


id: GO:0034063
data:
  {"annotated_genes":["SJAG_02663","SJAG_02638","SJAG_03157","SJAG_01317","SJAG_16457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102731,108081,108235,109410,109628],"is_not":false,"summary":null,"term":"GO:0034063"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and RNA molecules to form a stress granule.","definition_xrefs":["PMID:17392519","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-membrane-bounded organelle assembly","termid":"GO:0140694"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01317":null,"SJAG_02638":null,"SJAG_02663":null,"SJAG_03157":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"stress granule assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"SG assembly","type":"exact"}],"termid":"GO:0034063","terms_by_termid":{"GO:0034063":null}}


id: PBO:0084252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inositol-3-phosphate synthase; involved in synthesis of inositol phosphates and inositol-containing phospholipids; transcription is coregulated with other phospholipid biosynthetic genes by Ino2p and Ino4p, which bind the UASINO DNA element","termid":"PBO:0084252"}


id: GO:0047147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6S)-5,6,7,8-tetrahydrofolate + trimethylsulfonium = (6S)-5-methyl-5,6,7,8-tetrahydrofolate + dimethyl sulfide + H+.","definition_xrefs":["EC:2.1.1.19","RHEA:13693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"trimethylsulfonium-tetrahydrofolate N-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02573","MetaCyc:2.1.1.19-RXN"],"synonyms":[{"name":"trimethylsulfonium-tetrahydrofolate methyltransferase activity","type":"related"},{"name":"trimethylsulfonium:tetrahydrofolate N-methyltransferase activity","type":"related"},{"name":"trimethylsulphonium-tetrahydrofolate N-methyltransferase activity","type":"exact"}],"termid":"GO:0047147"}


id: GO:0110105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the mRNA cleavage and polyadenylation specificity factor complex.","definition_xrefs":["GOC:mah","PMID:27401558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"RNA 3'-end processing","termid":"GO:0031123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex assembly","termid":"GO:0110105"}


id: PBO:0089831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine synthase","termid":"PBO:0089831"}


id: PBO:0073077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal cell derived factor 2","termid":"PBO:0073077"}


id: GO:0031346
data:
  {"annotated_genes":["SJAG_02379","SJAG_01794","SJAG_03453","SJAG_00514","SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107443,89541,85944,83974,86913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the process involved in the formation, arrangement of constituent parts, or disassembly of cell projections.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection organization","termid":"GO:0031344"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"positively_regulates","term_name":"cell projection organization","termid":"GO:0030030"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell projection organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell projection organization","type":"narrow"},{"name":"positive regulation of cell projection organisation","type":"exact"},{"name":"positive regulation of cell projection organization and biogenesis","type":"related"},{"name":"stimulation of cell projection organization","type":"narrow"},{"name":"up regulation of cell projection organization","type":"exact"},{"name":"up-regulation of cell projection organization","type":"exact"},{"name":"upregulation of cell projection organization","type":"exact"}],"termid":"GO:0031346","terms_by_termid":{"GO:1902917":null}}


id: PBO:0072577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRN3 homolog, RNA polymerase I transcription factor","termid":"PBO:0072577"}


id: GO:0016639
data:
  {"annotated_genes":["SJAG_03266","SJAG_04054"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004354"},{"annotations":[97606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016040"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces NAD+ or NADP.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03266":null,"SJAG_04054":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.4.1.-"],"termid":"GO:0016639","terms_by_termid":{"GO:0004354":null,"GO:0016040":null}}


id: PBO:0074133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 34 member 1","termid":"PBO:0074133"}


id: PBO:0048760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germ cell-less 1, spermatogenesis associated","termid":"PBO:0048760"}


id: GO:0048026
data:
  {"annotated_genes":["SJAG_01040","SJAG_02058","SJAG_00996","SJAG_02018","SJAG_01919"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72914,74286,88217,106998],"is_not":false,"summary":null,"term":"GO:0048026"},{"annotations":[114500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of mRNA splicing via a spliceosomal mechanism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of RNA splicing","termid":"GO:0033120"},{"relation_name":"is_a","term_name":"regulation of mRNA splicing, via spliceosome","termid":"GO:0048024"},{"relation_name":"is_a","term_name":"positive regulation of mRNA processing","termid":"GO:0050685"},{"relation_name":"positively_regulates","term_name":"mRNA splicing, via spliceosome","termid":"GO:0000398"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00996":null,"SJAG_01040":null,"SJAG_01919":null,"SJAG_02018":null,"SJAG_02058":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"positive regulation of mRNA splicing, via spliceosome","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0035057"],"synonyms":[{"name":"activation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"activation of nuclear mRNA splicing, via spliceosome","type":"narrow"},{"name":"positive regulation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"positive regulation of nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"positive regulation of pre-mRNA splicing","type":"broad"},{"name":"stimulation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"stimulation of nuclear mRNA splicing, via spliceosome","type":"narrow"},{"name":"up regulation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"up regulation of nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"up-regulation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"up-regulation of nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"upregulation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"upregulation of nuclear mRNA splicing, via spliceosome","type":"exact"}],"termid":"GO:0048026","terms_by_termid":{"GO:0048026":null,"GO:1905746":null}}


id: GO:1904634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glomerular visceral epithelial cell apoptotic process.","definition_xrefs":["GOC:TermGenie","PMID:23692924","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell apoptotic process","termid":"GO:1904036"},{"relation_name":"is_a","term_name":"regulation of podocyte apoptotic process","termid":"GO:1904633"},{"relation_name":"negatively_regulates","term_name":"podocyte apoptotic process","termid":"GO:1903210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of podocyte apoptotic process","synonyms":[{"name":"down regulation of glomerular podocyte apoptosis","type":"narrow"},{"name":"down regulation of glomerular podocyte apoptotic process","type":"exact"},{"name":"down regulation of glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"down regulation of glomerular visceral epithelial cell apoptotic process","type":"exact"},{"name":"down regulation of podocyte apoptosis","type":"narrow"},{"name":"down regulation of podocyte apoptotic process","type":"exact"},{"name":"down-regulation of glomerular podocyte apoptosis","type":"narrow"},{"name":"down-regulation of glomerular podocyte apoptotic process","type":"exact"},{"name":"down-regulation of glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"down-regulation of glomerular visceral epithelial cell apoptotic process","type":"exact"},{"name":"down-regulation of podocyte apoptosis","type":"narrow"},{"name":"down-regulation of podocyte apoptotic process","type":"exact"},{"name":"downregulation of glomerular podocyte apoptosis","type":"narrow"},{"name":"downregulation of glomerular podocyte apoptotic process","type":"exact"},{"name":"downregulation of glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"downregulation of glomerular visceral epithelial cell apoptotic process","type":"exact"},{"name":"downregulation of podocyte apoptosis","type":"narrow"},{"name":"downregulation of podocyte apoptotic process","type":"exact"},{"name":"inhibition of glomerular podocyte apoptosis","type":"narrow"},{"name":"inhibition of glomerular podocyte apoptotic process","type":"narrow"},{"name":"inhibition of glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"inhibition of glomerular visceral epithelial cell apoptotic process","type":"narrow"},{"name":"inhibition of podocyte apoptosis","type":"narrow"},{"name":"inhibition of podocyte apoptotic process","type":"narrow"},{"name":"negative regulation of glomerular podocyte apoptosis","type":"narrow"},{"name":"negative regulation of glomerular podocyte apoptotic process","type":"exact"},{"name":"negative regulation of glomerular visceral epithelial cell apoptosis","type":"narrow"},{"name":"negative regulation of glomerular visceral epithelial cell apoptotic process","type":"exact"},{"name":"negative regulation of podocyte apoptosis","type":"exact"}],"termid":"GO:1904634"}


id: PR:Q9UTM5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1420.01c gene.","definition_xrefs":["UniProtKB:Q9UTM5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1420.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1420.01c","synonyms":[{"name":"Spom972h-SPAC1420.01c","type":"exact"}],"termid":"PR:Q9UTM5"}


id: GO:1901988
data:
  {"annotated_genes":["SJAG_03160","SJAG_02026","SJAG_03695","SJAG_02169","SJAG_02771","SJAG_01076","SJAG_00526","SJAG_00318","SJAG_01146","SJAG_00991","SJAG_00486","SJAG_02592","SJAG_04280","SJAG_02332","SJAG_00640","SJAG_00996","SJAG_01855","SJAG_01044","SJAG_01010","SJAG_04287","SJAG_01330","SJAG_03529","SJAG_01873","SJAG_03720","SJAG_02074","SJAG_03327","SJAG_03854","SJAG_03048","SJAG_01677","SJAG_03942","SJAG_01401","SJAG_04884","SJAG_02576","SJAG_04332","SJAG_02336","SJAG_02563","SJAG_01082","SJAG_01679","SJAG_04486","SJAG_03126","SJAG_04597","SJAG_00169","SJAG_04140","SJAG_03438","SJAG_01837","SJAG_00429","SJAG_01210","SJAG_03898","SJAG_04699","SJAG_04943","SJAG_01605","SJAG_05346","SJAG_01680","SJAG_04126","SJAG_03026","SJAG_00082","SJAG_03073","SJAG_04671","SJAG_00071","SJAG_04999","SJAG_03591","SJAG_04394","SJAG_02858","SJAG_02723","SJAG_02451","SJAG_04259","SJAG_04092","SJAG_00364","SJAG_00600","SJAG_02098","SJAG_01118","SJAG_01708","SJAG_01084","SJAG_02392","SJAG_05373","SJAG_01297","SJAG_00883","SJAG_03681","SJAG_03353","SJAG_01205","SJAG_02266","SJAG_03602","SJAG_01429","SJAG_03067","SJAG_03927","SJAG_00327","SJAG_01515","SJAG_00623","SJAG_06592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95655,111983,103301,104323,86791,109866,110349,108037,99975],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[105380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000077"},{"annotations":[110575,102379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[88585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044778"},{"annotations":[102674,112145,87490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[110338,112146,85133,102675,76821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[112762,102380,97868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[95065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007093"},{"annotations":[112088,90477,96604,86069,97505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044878"},{"annotations":[95257,112322,107275,113794,110339,89628,90010,78790,87851,98434,102676,105381,110545,112089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044773"},{"annotations":[85194,95424,105382,112897,87491,99397,108111,113192,113363,112147,88586,90033,96605,95258,90011,103906,102677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[97691,104956,85018,98435,111985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031568"},{"annotations":[87369,105740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[94501,90609,91921,112090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031569"},{"annotations":[97122,102678,85195,90013,96606,105383,86283,113109,113795,95425,107808,110340,87852,87492,84624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[112149,90610,103738,86511,92085,95259,108113,113193,88587,96926,98436,107809,84625,87493,112148,97593,85241,95426,102679,85196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031573"},{"annotations":[95501,97869,105977,112765,86793,109870,110578,102381,111639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[98442,88902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001100"},{"annotations":[85019,88215,89390,94941,104957,87798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000134"},{"annotations":[100571,91923,103081,89273,90437,107512,86070,89629,107642,107901,104641,112091,97066,102711,110341,110546,88986,108557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010972"},{"annotations":[107643,112092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110031"},{"annotations":[94763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902103"},{"annotations":[111640,102382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045841"},{"annotations":[90270],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[109871],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[112769],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[114141],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904291"},{"annotations":[97405],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"},{"annotations":[90271],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_p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regulation of cell cycle phase transition","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cell cycle phase transition","type":"exact"},{"name":"down regulation of cell cycle transition","type":"exact"},{"name":"down-regulation of cell cycle phase transition","type":"exact"},{"name":"down-regulation of cell cycle transition","type":"exact"},{"name":"downregulation of cell cycle phase transition","type":"exact"},{"name":"downregulation of cell cycle transition","type":"exact"},{"name":"inhibition of cell cycle phase transition","type":"narrow"},{"name":"inhibition of cell cycle transition","type":"exact"},{"name":"negative regulation of cell cycle 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id: PBO:0030964
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_trimethylation_at_centromere_inner_repeat","termid":"PBO:0030964"}


id: GO:0052025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host endomembrane system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host membrane","termid":"GO:0141171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host cell endomembrane system","synonyms":[{"name":"disruption by symbiont of host cell membrane","type":"broad"},{"name":"modification by symbiont of host cell membrane","type":"broad"},{"name":"symbiont-mediated disruption of host cell membrane","type":"broad"},{"name":"symbiont-mediated perturbation of host cell membrane","type":"broad"}],"termid":"GO:0052025"}


id: PATO:0001742
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A radioactivity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"radioactive","termid":"PATO:0001741"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased radioactivity","synonyms":[{"name":"high radioactivity","type":"exact"}],"termid":"PATO:0001742"}


id: PR:Q9HGN8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC36B7.02 gene.","definition_xrefs":["UniProtKB:Q9HGN8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"survival factor 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36B7.02","synonyms":[{"name":"Spom972h-SPBC36B7.02","type":"exact"}],"termid":"PR:Q9HGN8"}


id: GO:0141074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a virus interferes with, inhibits or disrupt a cGAS/STING signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:27234299","PMID:26405230","PMID:29018427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host signal transduction pathway","termid":"GO:0052029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host cGAS-STING signal transduction","synonyms":[{"name":"disruption of host cGAS-STING signal transduction","type":"exact"},{"name":"disruption of host cGAS-STING signaling","type":"exact"},{"name":"suppression of host cGAS-STING","type":"exact"}],"termid":"GO:0141074"}


id: PBO:0029389
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleoplasm_during_cellular_response_to_hydroxyurea","termid":"PBO:0029389"}


id: GO:0022809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Small molecule produced by bacteria that carries an ion across the membrane by enclosing the ion and travelling with the ion across the membrane. It does not form a fully open pore across the membrane.","definition_xrefs":["ISBN:0815340729","GOC:pr","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"mobile ion carrier activity","synonyms":[{"name":"ionophore","type":"broad"}],"termid":"GO:0022809"}


id: FYPO:0003298
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of autophosphorylation of one or more specific proteins, or of specific protein sites, is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"},{"relation_name":"is_a","term_name":"abnormal protein autophosphorylation during vegetative growth","termid":"FYPO:0003019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein autophosphorylation during vegetative growth","synonyms":[{"name":"decreased protein autophosphorylation during mitotic cell cycle","type":"related"},{"name":"reduced protein autophosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0003298"}


id: PBO:0001240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Bos1 (predicted)","termid":"PBO:0001240"}


id: GO:0002653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of tolerance induction dependent upon immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tolerance induction","termid":"GO:0002644"},{"relation_name":"is_a","term_name":"regulation of tolerance induction dependent upon immune response","termid":"GO:0002652"},{"relation_name":"is_a","term_name":"negative regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002823"},{"relation_name":"negatively_regulates","term_name":"tolerance induction dependent upon immune response","termid":"GO:0002461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tolerance induction dependent upon immune response","synonyms":[{"name":"down regulation of tolerance induction dependent upon immune response","type":"exact"},{"name":"down-regulation of tolerance induction dependent upon immune response","type":"exact"},{"name":"downregulation of tolerance induction dependent upon immune response","type":"exact"},{"name":"inhibition of tolerance induction dependent upon immune response","type":"narrow"},{"name":"negative regulation of immune response-dependent tolerance induction","type":"exact"}],"termid":"GO:0002653"}


id: PBO:0030320
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_palmitoyl-CoA_ligase_activity","termid":"PBO:0030320"}


id: PBO:0028527
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_silencing_at_centromere_central_core","termid":"PBO:0028527"}


id: PBO:0066711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 8","termid":"PBO:0066711"}


id: PBO:0078223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 11-1","termid":"PBO:0078223"}


id: GO:0019858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cytosine, 4-amino-2-hydroxypyrimidine, a pyrimidine derivative that is one of the five main bases found in nucleic acids; it occurs widely in cytidine derivatives.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase metabolic process","termid":"GO:0006206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"cytosine metabolic process","synonyms":[{"name":"cytosine metabolism","type":"exact"}],"termid":"GO:0019858"}


id: PBO:0079807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member B28","termid":"PBO:0079807"}


id: PBO:0062402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 25 pseudogene","termid":"PBO:0062402"}


id: GO:0090616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of an mRNA molecule that derives from the mitochondrial genome.","definition_xrefs":["PMID:25181358","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA 3'-end processing","termid":"GO:0000965"},{"relation_name":"is_a","term_name":"mRNA 3'-end processing","termid":"GO:0031124"},{"relation_name":"is_a","term_name":"mitochondrial mRNA processing","termid":"GO:0090615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0140053","GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"mitochondrial mRNA 3'-end processing","termid":"GO:0090616"}


id: GO:0099633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the membrane adjacent to a postsynaptic specialization (e.g. post synaptic density).","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"},{"relation_name":"is_a","term_name":"protein localization to postsynaptic membrane","termid":"GO:1903539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to postsynaptic specialization membrane","synonyms":[{"name":"protein localisation in postsynaptic specialization membrane","type":"exact"}],"termid":"GO:0099633"}


id: PBO:0039926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 28","termid":"PBO:0039926"}


id: MOD:00417
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-carboxamidoethyl-L-cysteine.","definition_xrefs":["OMSSA:5","PubMed:1481983","DeltaMass:72","Unimod:24#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-carboxamidoethyl-L-cysteine","synonyms":[{"name":"Acrylamide adduct","type":"related"},{"name":"PAM-Cys","type":"exact"},{"name":"Propionamide","type":"related"},{"name":"Propionamide or Acrylamide adduct","type":"exact"},{"name":"S-(3-amino-3-oxopropyl)cysteine","type":"exact"},{"name":"S-carbamoylethyl-L-cysteine","type":"exact"},{"name":"S-propanamide-L-cysteine","type":"exact"},{"name":"propionamidec","type":"exact"}],"termid":"MOD:00417"}


id: PBO:0091991
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Papulacandin B Resistance","termid":"PBO:0091991"}


id: GO:0061772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a xenobiotic through the blood-nerve barrier.","definition_xrefs":["PMID:22733753","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic transport","termid":"GO:0042908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"xenobiotic transport across blood-nerve barrier","synonyms":[{"name":"drug transport across blood-nerve barrier","type":"related"},{"name":"drug transport across perineurial barrier","type":"exact"}],"termid":"GO:0061772"}


id: GO:1903672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sprouting angiogenesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16756958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of angiogenesis","termid":"GO:0045766"},{"relation_name":"is_a","term_name":"regulation of sprouting angiogenesis","termid":"GO:1903670"},{"relation_name":"positively_regulates","term_name":"sprouting angiogenesis","termid":"GO:0002040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sprouting angiogenesis","synonyms":[{"name":"activation of sprouting angiogenesis","type":"narrow"},{"name":"up regulation of sprouting angiogenesis","type":"exact"},{"name":"up-regulation of sprouting angiogenesis","type":"exact"},{"name":"upregulation of sprouting angiogenesis","type":"exact"}],"termid":"GO:1903672"}


id: GO:0008216
data:
  {"annotated_genes":["SJAG_04130","SJAG_03632","SJAG_04481"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98654],"is_not":false,"summary":null,"term":"GO:0008216"},{"annotations":[109456,98831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008295"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving spermidine, N-(3-aminopropyl)-1,4-diaminobutane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine metabolic process","termid":"GO:0006595"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03632":null,"SJAG_04130":null,"SJAG_04481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermidine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"spermidine metabolism","type":"exact"}],"termid":"GO:0008216","terms_by_termid":{"GO:0008216":null,"GO:0008295":null}}


id: GO:1902997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neurofibrillary tangle assembly.","definition_xrefs":["GOC:sjp","GO_REF:0000058","GOC:TermGenie","PMID:15897157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of inclusion body assembly","termid":"GO:0090084"},{"relation_name":"is_a","term_name":"regulation of neurofibrillary tangle assembly","termid":"GO:1902996"},{"relation_name":"negatively_regulates","term_name":"neurofibrillary tangle assembly","termid":"GO:1902988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of neurofibrillary tangle assembly","synonyms":[{"name":"down regulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"down regulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"down regulation of neurofibrillary tangle assembly","type":"exact"},{"name":"down regulation of neurofibrillary tangle formation","type":"exact"},{"name":"down regulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"down regulation of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"down-regulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"down-regulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"down-regulation of neurofibrillary tangle assembly","type":"exact"},{"name":"down-regulation of neurofibrillary tangle formation","type":"exact"},{"name":"down-regulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"down-regulation of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"downregulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"downregulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"downregulation of neurofibrillary tangle assembly","type":"exact"},{"name":"downregulation of neurofibrillary tangle formation","type":"exact"},{"name":"downregulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"downregulation of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"inhibition of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"inhibition of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"inhibition of neurofibrillary tangle assembly","type":"narrow"},{"name":"inhibition of neurofibrillary tangle formation","type":"narrow"},{"name":"inhibition of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"inhibition of star-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"negative regulation of flame-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"negative regulation of flame-shaped neurofibrillary tangle formation","type":"narrow"},{"name":"negative regulation of neurofibrillary tangle formation","type":"exact"},{"name":"negative regulation of star-shaped neurofibrillary tangle assembly","type":"narrow"},{"name":"negative regulation of star-shaped neurofibrillary tangle formation","type":"narrow"}],"termid":"GO:1902997"}


id: GO:1903083
data:
  {"annotated_genes":["SJAG_02336","SJAG_03327","SJAG_04126","SJAG_01297","SJAG_02761","SJAG_03540","SJAG_04259"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97404,97870,109872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034501"},{"annotations":[99985,104336,96458,114758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140210"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a condensed chromosome.","definition_xrefs":["GOC:TermGenie","GO_REF:0000087","GOC:kmv","PMID:12707312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome","termid":"GO:0034502"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01297":null,"SJAG_02336":null,"SJAG_02761":null,"SJAG_03327":null,"SJAG_03540":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to condensed chromosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation in condensed chromosome","type":"exact"},{"name":"protein localisation to condensed chromosome","type":"exact"},{"name":"protein localization in condensed chromosome","type":"exact"}],"termid":"GO:1903083","terms_by_termid":{"GO:0034501":null,"GO:0140210":null}}


id: SO:0001633
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located within 5 KB of the end of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"downstream_gene_variant","termid":"SO:0001632"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5KB_downstream_variant","secondary_identifiers":["http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp"],"synonyms":[{"name":"5KB downstream variant","type":"exact"},{"name":"Seattleseq:downstream-gene","type":"exact"},{"name":"downstream","type":"exact"},{"name":"within 5KB downstream","type":"related"}],"termid":"SO:0001633"}


id: PBO:0063036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p21 (RAC1) activated kinase 3","termid":"PBO:0063036"}


id: PBO:0061998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily G member 1 pseudogene","termid":"PBO:0061998"}


id: GO:0006383
data:
  {"annotated_genes":["SJAG_00619","SJAG_05339","SJAG_04161","SJAG_00585","SJAG_00421","SJAG_00142","SJAG_03120","SJAG_01765","SJAG_01444","SJAG_04934","SJAG_03007","SJAG_01313","SJAG_03181","SJAG_02070","SJAG_03931","SJAG_02242","SJAG_03761","SJAG_00637","SJAG_03354","SJAG_00731","SJAG_04261","SJAG_02898","SJAG_03546","SJAG_04408","SJAG_02815","SJAG_01827","SJAG_03689","SJAG_03035","SJAG_02101","SJAG_03921","SJAG_02600","SJAG_01799","SJAG_00067"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85632,88089,89977,97577,98759,99417,101855,107553,108458,112547],"is_not":false,"summary":null,"term":"GO:0006383"},{"annotations":[105202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042791"},{"annotations":[92465],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0016480"},{"annotations":[87248,72890,104476],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006359"},{"annotations":[99147,112295],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070898"},{"annotations":[94223,95951,89082,112073],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006386"},{"annotations":[102992,97616,105203,95646,108726,84995,91653,84266,104510,111449,99148],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006384"},{"annotations":[111754,112859,89980,109887,88092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042797"}]},"cv_name":"biological_process","definition":"The synthesis of RNA from a DNA template by RNA polymerase III, originating at an RNAP III promoter.","definition_xrefs":["GOC:txnOH","PMID:12381659","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00067":null,"SJAG_00142":null,"SJAG_00421":null,"SJAG_00585":null,"SJAG_00619":null,"SJAG_00637":null,"SJAG_00731":null,"SJAG_01313":null,"SJAG_01444":null,"SJAG_01765":null,"SJAG_01799":null,"SJAG_01827":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02242":null,"SJAG_02600":null,"SJAG_02815":null,"SJAG_02898":null,"SJAG_03007":null,"SJAG_03035":null,"SJAG_03120":null,"SJAG_03181":null,"SJAG_03354":null,"SJAG_03546":null,"SJAG_03689":null,"SJAG_03761":null,"SJAG_03921":null,"SJAG_03931":null,"SJAG_04161":null,"SJAG_04261":null,"SJAG_04408":null,"SJAG_04934":null,"SJAG_05339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"transcription by RNA polymerase III","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0001009","GO:0001035","GO:0001041"],"synonyms":[{"name":"RNA polymerase III transcription factor activity","type":"related"},{"name":"U2 snRNA transcription (S. cerevisiae)","type":"narrow"},{"name":"U6 snRNA transcription (mammalian)","type":"narrow"},{"name":"transcription from Pol III promoter","type":"exact"},{"name":"transcription from RNA polymerase III promoter","type":"exact"},{"name":"transcription from RNA polymerase III type 2 promoter","type":"narrow"},{"name":"transcription from RNA polymerase III type 3 promoter","type":"narrow"},{"name":"transcription from a RNA polymerase III hybrid type promoter","type":"narrow"}],"termid":"GO:0006383","terms_by_termid":{"GO:0006359":null,"GO:0006383":null,"GO:0006384":null,"GO:0006386":null,"GO:0016480":null,"GO:0042791":null,"GO:0042797":null,"GO:0070898":null}}


id: GO:0060919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of auxins from outside of a cell into a cell.","definition_xrefs":["PMID:22773749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin transport","termid":"GO:0060918"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"auxin import into cell","synonyms":[{"name":"auxin influx","type":"broad"}],"termid":"GO:0060919"}


id: GO:0039705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The continuation of translation of a viral mRNA beyond a stop codon by the use of a special tRNA that recognizes the UAG and UGA codons as modified amino acids, rather than as termination codons.","definition_xrefs":["GOC:ch","GOC:bf","GOC:jl","VZ:859","PMID:10839817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational readthrough","termid":"GO:0006451"},{"relation_name":"part_of","term_name":"viral translation","termid":"GO:0019081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"viral translational readthrough","synonyms":[{"name":"viral RNA suppression of termination","type":"related"},{"name":"viral stop codon readthrough","type":"exact"}],"termid":"GO:0039705"}


id: PBO:0040846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biogenesis of lysosomal organelles complex 1 subunit 1","termid":"PBO:0040846"}


id: PBO:0046947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 72 member D","termid":"PBO:0046947"}


id: FYPO:0001226
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, and contains a single nucleus and an asymmetrically located septum. The septum divides the cell into two compartments, one of which contains the nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mislocalized septum during vegetative growth","termid":"FYPO:0000339"},{"relation_name":"is_a","term_name":"inviable mononucleate monoseptate vegetative cell with anucleate compartment","termid":"FYPO:0002303"},{"relation_name":"is_a","term_name":"mononucleate vegetative cell with mislocalized septum and anucleate compartment","termid":"FYPO:0007652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000032","FYPO:0005447","FYPO:0000002","FYPO:0000641","FYPO:0001985","FYPO:0000138","FYPO:0000337","FYPO:0000004","FYPO:0000631"],"is_obsolete":false,"name":"inviable mononucleate vegetative cell with mislocalized septum and anucleate compartment","synonyms":[{"name":"inviable mononucleate cell with mislocalized septum during vegetative growth","type":"exact"},{"name":"inviable mononucleate monoseptate vegetative cell with mislocalized septum","type":"exact"},{"name":"inviable mononucleate vegetative cell with abnormal septum location","type":"exact"},{"name":"inviable mononucleate vegetative cell with abnormal septum position","type":"exact"},{"name":"inviable mononucleate vegetative cell with asymmetric septum","type":"exact"},{"name":"inviable mononucleate vegetative cell with asymmetrically located septum","type":"exact"},{"name":"inviable mononucleate vegetative cell with mislocalised septum","type":"exact"},{"name":"inviable mononucleate vegetative cell with mislocalized septum","type":"exact"},{"name":"inviable mononucleate vegetative cell with mislocalized septum during mitotic cell cycle","type":"related"},{"name":"inviable mononucleate vegetative cell with misplaced septum","type":"exact"},{"name":"inviable mononucleate vegetative cell with single mislocalized septum","type":"exact"},{"name":"lethal; mononucleate vegetative cell with mislocalized septum","type":"exact"}],"termid":"FYPO:0001226"}


id: FYPO:0003488
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is elongated during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete elongated cell during cellular response to ionizing radiation (obsolete FYPO:0003488)","synonyms":[{"name":"elongated cell during cellular response to IR","type":"exact"},{"name":"elongated cell during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"elongated cell during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"elongated in response to ionizing radiation","type":"exact"}],"termid":"FYPO:0003488"}


id: PBO:0038897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor A3","termid":"PBO:0038897"}


id: GO:0090422
data:
  {"annotated_genes":["SJAG_00835"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99720],"is_not":false,"summary":null,"term":"GO:0090422"}]},"cv_name":"molecular_function","definition":"Enables the transfer of thiamine pyrophosphate a substance from one side of a membrane to the other.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"thiamine transmembrane transporter activity","termid":"GO:0015234"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"quaternary ammonium group transmembrane transporter activity","termid":"GO:0015651"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"thiamine pyrophosphate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8875838"],"synonyms":[{"name":"thiamine diphosphate transporter activity","type":"exact"},{"name":"thiamine pyrophosphate transporter activity","type":"narrow"}],"termid":"GO:0090422","terms_by_termid":{"GO:0090422":null}}


id: GO:0046491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-methylmalonyl-CoA, the L-enantiomer of 2-carboxypropanoyl-CoA. S-methylmalonyl-CoA is an intermediate in the beta oxidation of odd-numbered fatty acids in animals.","definition_xrefs":["GOC:jsg","GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA metabolic process","termid":"GO:0006637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"L-methylmalonyl-CoA metabolic process","synonyms":[{"name":"L-methylmalonyl-CoA metabolism","type":"exact"}],"termid":"GO:0046491"}


id: PBO:0075379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 17","termid":"PBO:0075379"}


id: PBO:0081111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFAND2A pseudogene 2","termid":"PBO:0081111"}


id: PBO:0064266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and FYVE domain containing 2","termid":"PBO:0064266"}


id: GO:1905849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of forward locomotion.","definition_xrefs":["GOC:TermGenie","PMID:11717360","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of locomotion","termid":"GO:0040013"},{"relation_name":"is_a","term_name":"regulation of forward locomotion","termid":"GO:0043059"},{"relation_name":"negatively_regulates","term_name":"forward locomotion","termid":"GO:0043056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of forward locomotion","synonyms":[{"name":"down regulation of forward locomotion","type":"exact"},{"name":"down-regulation of forward locomotion","type":"exact"},{"name":"downregulation of forward locomotion","type":"exact"},{"name":"inhibition of forward locomotion","type":"narrow"}],"termid":"GO:1905849"}


id: FYPO:0002713
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of DNA recombination is decreased at the mating type locus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased DNA recombination","termid":"FYPO:0002712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000293","FYPO:0001985"],"is_obsolete":false,"name":"decreased DNA recombination at mating type locus","synonyms":[{"name":"decreased DNA recombination frequency at mating type locus","type":"exact"},{"name":"decreased DNA recombination rate at mating type locus","type":"related"},{"name":"decreased recombination at mating type locus","type":"exact"},{"name":"reduced DNA recombination at mating type locus","type":"exact"}],"termid":"FYPO:0002713"}


id: PBO:0002002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine DNA glycosylase Myh1","termid":"PBO:0002002"}


id: PR:P05511
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPMIT.06 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P05511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized 91 kDa protein in cob intron (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.06","synonyms":[{"name":"Spom972h-SPMIT.06","type":"exact"}],"termid":"PR:P05511"}


id: PBO:0046191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELMO domain containing 2","termid":"PBO:0046191"}


id: PBO:0056469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAST4 intronic transcript 1","termid":"PBO:0056469"}


id: PBO:0087504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of GPI-GlcNAc transferase involved in synthesis of GlcNAc-PI; N-acetylglucosaminyl phosphatidylinositol (GlcNAc-PI) is the first intermediate in glycosylphosphatidylinositol (GPI) anchor synthesis; shares similarity with mammalian PIG-P","termid":"PBO:0087504"}


id: PBO:0041051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 7 pseudogene 2","termid":"PBO:0041051"}


id: GO:1904997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leukocyte adhesion to arterial endothelial cell.","definition_xrefs":["GO_REF:0000058","GOC:bc","GOC:BHF_miRNA","GOC:TermGenie","GOC:BHF","PMID:22267480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte adhesion to vascular endothelial cell","termid":"GO:1904994"},{"relation_name":"regulates","term_name":"leukocyte adhesion to arterial endothelial cell","termid":"GO:0061757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte adhesion to arterial endothelial cell","termid":"GO:1904997"}


id: PBO:0089641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual-specifity cAMP/cGMP phosphodiesterase Cgs2","termid":"PBO:0089641"}


id: GO:0000019
data:
  {"annotated_genes":["SJAG_00995"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045951"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA recombination during mitosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA recombination","termid":"GO:0000018"},{"relation_name":"regulates","term_name":"mitotic recombination","termid":"GO:0006312"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259"],"is_obsolete":false,"name":"regulation of mitotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of recombination within rDNA repeats","type":"narrow"}],"termid":"GO:0000019","terms_by_termid":{"GO:0045951":null}}


id: GO:0002913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of lymphocyte anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction","termid":"GO:0002645"},{"relation_name":"is_a","term_name":"regulation of lymphocyte anergy","termid":"GO:0002911"},{"relation_name":"positively_regulates","term_name":"lymphocyte anergy","termid":"GO:0002249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphocyte anergy","synonyms":[{"name":"activation of lymphocyte anergy","type":"narrow"},{"name":"stimulation of lymphocyte anergy","type":"narrow"},{"name":"up regulation of lymphocyte anergy","type":"exact"},{"name":"up-regulation of lymphocyte anergy","type":"exact"},{"name":"upregulation of lymphocyte anergy","type":"exact"}],"termid":"GO:0002913"}


id: PBO:0067093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 130, pseudogene","termid":"PBO:0067093"}


id: PBO:0079019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-undetermined (NNN) 2-1","termid":"PBO:0079019"}


id: PBO:0079341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 25, pseudogene","termid":"PBO:0079341"}


id: GO:0031118
data:
  {"annotated_genes":["SJAG_04754","SJAG_01172","SJAG_03572","SJAG_00083","SJAG_00566","SJAG_03755","SJAG_01234"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86086,91425,97234],"is_not":false,"summary":null,"term":"GO:0031118"},{"annotations":[88332,87269,102289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000455"},{"annotations":[102350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000454"}]},"cv_name":"biological_process","definition":"The intramolecular conversion of uridine to pseudouridine in an rRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA modification","termid":"GO:0000154"},{"relation_name":"is_a","term_name":"pseudouridine synthesis","termid":"GO:0001522"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00566":null,"SJAG_01172":null,"SJAG_01234":null,"SJAG_03572":null,"SJAG_03755":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0042254","GO:0010467","GO:0044085"],"is_obsolete":false,"name":"rRNA pseudouridine synthesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031118","terms_by_termid":{"GO:0000454":null,"GO:0000455":null,"GO:0031118":null}}


id: GO:0002859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of natural killer cell mediated cytotoxicity directed against tumor cell target.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of natural killer cell mediated immune response to tumor cell","termid":"GO:0002856"},{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002858"},{"relation_name":"is_a","term_name":"negative regulation of natural killer cell mediated cytotoxicity","termid":"GO:0045953"},{"relation_name":"negatively_regulates","term_name":"natural killer cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","synonyms":[{"name":"down regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"exact"},{"name":"down-regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"exact"},{"name":"downregulation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"exact"},{"name":"inhibition of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"narrow"}],"termid":"GO:0002859"}


id: GO:1901635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of maintenance of presynaptic active zone structure.","definition_xrefs":["PMID:22426000","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of maintenance of presynaptic active zone structure (obsolete GO:1901635)","synonyms":[{"name":"regulation of maintenance of presynaptic active zone structure","type":"exact"}],"termid":"GO:1901635"}


id: PBO:0030969
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation","termid":"PBO:0030969"}


id: PBO:0004600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin exportin T Los1 (predicted)","termid":"PBO:0004600"}


id: PBO:0063501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase phosphatase catalytic subunit 2","termid":"PBO:0063501"}


id: PBO:0045013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disco interacting protein 2 homolog B","termid":"PBO:0045013"}


id: MOD:01400
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to an L-lysyl-poly(ADP-ribose).","definition_xrefs":["PubMed:6772638","RESID:AA0477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysyl-poly(ADP-ribose)","synonyms":[{"name":"L-lysyl-poly(ADP-ribose)","type":"exact"},{"name":"MOD_RES Lysyl poly(ADP-ribose)","type":"exact"},{"name":"poly[2'-adenosine 5'-(trihydrogen diphosphate) 5'->5'-ester with 1alpha-D-ribofuranosyl] (2S)-2,6-diaminohexanoate","type":"exact"}],"termid":"MOD:01400"}


id: PBO:0043957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin gamma B","termid":"PBO:0043957"}


id: GO:0038094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the Fc portion of immunoglobulin G (IgG) to an Fc-gamma receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. The Fc portion of an immunoglobulin is its C-terminal constant region.","definition_xrefs":["GOC:phg","PMID:11244038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fc receptor signaling pathway","termid":"GO:0038093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Fc-gamma receptor signaling pathway","synonyms":[{"name":"Fc-gamma receptor signalling pathway","type":"exact"}],"termid":"GO:0038094"}


id: PBO:0053834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1099","termid":"PBO:0053834"}


id: GO:0045101
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Glial fibrillary acidic protein forms filaments in the glial cells that surround neurons and in astrocytes.","definition_xrefs":["ISBN:0716731363"],"gene_count":0,"genotype_count":0,"name":"obsolete glial fibrillary acidic protein (obsolete GO:0045101)","synonyms":[{"name":"GFAP","type":"exact"},{"name":"glial fibrillary acidic protein","type":"exact"}],"termid":"GO:0045101"}


id: PBO:0078421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 2-2","termid":"PBO:0078421"}


id: PBO:0062636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily J member 5 pseudogene","termid":"PBO:0062636"}


id: PBO:0079263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 34","termid":"PBO:0079263"}


id: PBO:0004353
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystonia","termid":"PBO:0004353"}


id: PBO:0052633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 1","termid":"PBO:0052633"}


id: FYPO:0004709
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is greater than normal.","definition_xrefs":["PomBase:mah","PMID:22064477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased number of Rad52 foci","synonyms":[{"name":"increased number of Rad22 foci","type":"exact"}],"termid":"FYPO:0004709"}


id: PBO:0058237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4525","termid":"PBO:0058237"}


id: FYPO:0003934
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which an RNA catabolic process that degrades mRNA encoded in the nucleus does not occur. Total mRNA or a specific mRNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["GO:0000956","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"},{"relation_name":"is_a","term_name":"abnormal RNA catabolic process","termid":"FYPO:0003551"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000294","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished nuclear mRNA catabolic process","synonyms":[{"name":"abolished nuclear mRNA breakdown","type":"exact"},{"name":"abolished nuclear mRNA catabolic process during mitotic cell cycle","type":"related"},{"name":"abolished nuclear mRNA catabolic process during vegetative growth","type":"exact"},{"name":"abolished nuclear mRNA catabolism","type":"exact"},{"name":"abolished nuclear mRNA degradation","type":"exact"},{"name":"abolished nuclear-transcribed mRNA catabolic process","type":"exact"},{"name":"nuclear mRNA catabolic process abolished","type":"exact"}],"termid":"FYPO:0003934"}


id: PBO:0028820
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_replication_fork_reversal","termid":"PBO:0028820"}


id: PR:Q9UUJ7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A COP9 signalosome complex subunit 7b that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome complex subunit 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.12c","secondary_identifiers":["UniProtKB:Q9UUJ7"],"synonyms":[{"name":"Spom972h-COPS7B","type":"exact"}],"termid":"PR:Q9UUJ7"}


id: PBO:0001010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis II protein Mes1","termid":"PBO:0001010"}


id: SO:1000068
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mutation causing a disruption of the translational reading frame, due to the insertion of two nucleotides.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000068 sequence_variant_causing_plus_2_frameshift (obsolete SO:1000068)","synonyms":[{"name":"plus 2 frameshift mutation","type":"exact"},{"name":"sequence variant causing plus 2 frameshift","type":"exact"}],"termid":"SO:1000068"}


id: PBO:0076393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional adaptor 1","termid":"PBO:0076393"}


id: GO:0070528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A series of reactions, mediated by the intracellular serine/threonine kinase protein kinase C, which occurs as a result of a single trigger reaction or compound.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"protein kinase C signaling","synonyms":[{"name":"PKC signal transduction","type":"exact"},{"name":"PKC signaling cascade","type":"related"},{"name":"protein kinase C signal transduction","type":"exact"},{"name":"protein kinase C signaling cascade","type":"related"},{"name":"protein kinase C signalling cascade","type":"related"}],"termid":"GO:0070528"}


id: PR:Q10483
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UBX domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17C9.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.11c","secondary_identifiers":["UniProtKB:Q10483"],"synonyms":[{"name":"Spom972h-UBXN1","type":"exact"}],"termid":"PR:Q10483"}


id: GO:0004331
data:
  {"annotated_genes":["SJAG_02713","SJAG_00039","SJAG_00685","SJAG_05314"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74927,85048,85770,96014],"is_not":false,"summary":null,"term":"GO:0004331"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-fructose 2,6-bisphosphate + H2O = D-fructose-6-phosphate + phosphate.","definition_xrefs":["EC:3.1.3.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar-phosphatase activity","termid":"GO:0050308"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00039":null,"SJAG_00685":null,"SJAG_02713":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"fructose-2,6-bisphosphate 2-phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["RHEA:17289","MetaCyc:3.1.3.46-RXN","Reactome:R-HSA-5628905","GO:0004330","Reactome:R-HSA-70262"],"synonyms":[{"name":"D-fructose-2,6-bisphosphate 2-phosphohydrolase activity","type":"related"},{"name":"beta-D-fructose-2,6-bisphosphate 2-phosphohydrolase activity","type":"related"},{"name":"fructose-2,6-bisphosphatase activity","type":"related"}],"termid":"GO:0004331","terms_by_termid":{"GO:0004331":null}}


id: PBO:0082526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell fusion regulator; cytoplasmic protein localized to shmoo tip; required for alignment of parental nuclei before nuclear fusion during mating; contains a Dbl-homology domain; binds specifically with activated Cdc42p","termid":"PBO:0082526"}


id: GO:0009897
data:
  {"annotated_genes":["SJAG_03204","SJAG_02916","SJAG_02093","SJAG_02173","SJAG_04238","SJAG_05272","SJAG_00254","SJAG_04875","SJAG_01290","SJAG_00109","SJAG_00340","SJAG_04209","SJAG_04850","SJAG_00096","SJAG_02435","SJAG_00415","SJAG_04851","SJAG_03640","SJAG_01029","SJAG_04685","SJAG_02260","SJAG_01086","SJAG_00784","SJAG_01835","SJAG_00310","SJAG_04789"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85998,86189,87639,87935,90119,90903,90915,90916,90917,91347,96880,98317,98324,98325,100080,102615,103846,109117,109820,110453,110553,110833,111683,112360,113428,113861,114421,114861],"is_not":false,"summary":null,"term":"GO:0009897"}]},"cv_name":"cellular_component","definition":"The leaflet of the plasma membrane that faces away from the cytoplasm and any proteins embedded or anchored in it or attached to its surface.","definition_xrefs":["GOC:dos","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"side of membrane","termid":"GO:0098552"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"},{"relation_name":"part_of","term_name":"cell surface","termid":"GO:0009986"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00096":null,"SJAG_00109":null,"SJAG_00254":null,"SJAG_00310":null,"SJAG_00340":null,"SJAG_00415":null,"SJAG_00784":null,"SJAG_01029":null,"SJAG_01086":null,"SJAG_01290":null,"SJAG_01835":null,"SJAG_02093":null,"SJAG_02173":null,"SJAG_02260":null,"SJAG_02435":null,"SJAG_02916":null,"SJAG_03204":null,"SJAG_03640":null,"SJAG_04209":null,"SJAG_04238":null,"SJAG_04685":null,"SJAG_04789":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_04875":null,"SJAG_05272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"part_of","termid":"GO:0009986"}],"interesting_parent_ids":["GO:0005886","GO:0009986","GO:0005575"],"is_obsolete":false,"name":"external side of plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"external leaflet of plasma membrane","type":"exact"},{"name":"juxtamembrane","type":"broad"},{"name":"outer surface of cytoplasmic membrane","type":"exact"}],"termid":"GO:0009897","terms_by_termid":{"GO:0009897":null}}


id: PBO:0004442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1741 family protein","termid":"PBO:0004442"}


id: GO:0075338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the increase in size or mass of an organism, or the progression of an organism from an initial condition to a later condition, occurring in, on or near the exterior of its host organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of growth or development of symbiont during interaction with host (obsolete GO:0075338)","synonyms":[{"name":"modulation of growth or development of symbiont during interaction with host","type":"exact"}],"termid":"GO:0075338"}


id: PBO:0016572
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RPC40","termid":"PBO:0016572"}


id: PBO:0086402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative FAD transporter, similar to Flc1p and Flc2p; localized to the ER; FLC3 has a paralog, FLC1, that arose from the whole genome duplication","termid":"PBO:0086402"}


id: PBO:0035974
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_acetaldehyde","termid":"PBO:0035974"}


id: GO:2000029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of proanthocyanidin biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"is_a","term_name":"regulation of phenylpropanoid metabolic process","termid":"GO:2000762"},{"relation_name":"regulates","term_name":"proanthocyanidin biosynthetic process","termid":"GO:0010023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of proanthocyanidin biosynthetic process","synonyms":[{"name":"regulation of proanthocyanidin anabolism","type":"exact"},{"name":"regulation of proanthocyanidin biosynthesis","type":"exact"},{"name":"regulation of proanthocyanidin formation","type":"exact"},{"name":"regulation of proanthocyanidin synthesis","type":"exact"}],"termid":"GO:2000029"}


id: PBO:0081970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZRANB2 divergent transcript","termid":"PBO:0081970"}


id: GO:0046805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent linkage of heme and a protein via 1'-L-histidine (otherwise known as tau-heme-histidine, tele-heme-histidine).","definition_xrefs":["RESID:AA0329"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-heme linkage via 1'-L-histidine (obsolete GO:0046805)","synonyms":[{"name":"protein-haem linkage via 1'-L-histidine","type":"exact"}],"termid":"GO:0046805"}


id: PR:C6Y4B6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC12G12.17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4B6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-classical export protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.17","synonyms":[{"name":"Spom972h-SPAC12G12.17","type":"exact"}],"termid":"PR:C6Y4B6"}


id: GO:0047877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1R,2S)-ephedrine + NAD+ = (R)-2-methylimino-1-phenylpropan-1-ol + 2 H+ + NADH.","definition_xrefs":["RHEA:16289","EC:1.5.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"ephedrine dehydrogenase activity","secondary_identifiers":["MetaCyc:EPHEDRINE-DEHYDROGENASE-RXN","KEGG_REACTION:R03614"],"synonyms":[{"name":"(-)-ephedrine:NAD+ 2-oxidoreductase activity","type":"related"}],"termid":"GO:0047877"}


id: _global:regulates_o_occurs_in
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"A relation that holds between a regulatory process and the entity which the regulated biological process or molecular function occurs in.","definition_xrefs":["GOC:dph","GOC:mtg_berkeley_2012_08_27","GOC:cjm"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_process_that_occurs_in","secondary_identifiers":["GOREL:0001004"],"synonyms":[{"name":"regulates_o_occurs_in","type":"exact"}],"termid":"_global:regulates_o_occurs_in"}


id: PBO:0033810
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_recombination_at_telomere_during_nitrogen_starvation","termid":"PBO:0033810"}


id: GO:0001744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of the optic lobe placode. In Drosophila, for example, the placode appears in the dorsolateral region of the head in late stage 11 embryos and is the precursor to the larval visual system.","definition_xrefs":["GOC:mtg_sensu","PMID:8402833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal placode formation","termid":"GO:0060788"},{"relation_name":"part_of","term_name":"insect visual primordium development","termid":"GO:0001748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"insect visual primordium formation","secondary_identifiers":["GO:0007457"],"synonyms":[{"name":"optic lobe and Bolwig's organ precursor formation","type":"exact"},{"name":"optic lobe placode formation","type":"exact"}],"termid":"GO:0001744"}


id: GO:0035583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Confining TGFbeta to the extracellular matrix (ECM) such that it is separated from other components of the signaling pathway, including its cell surface receptor. TGFbeta is secreted as part of a latent complex that is targeted to the extracellular matrix through latent-TGFbeta-binding protein (LTBP)-mediated association with matrix proteins.","definition_xrefs":["GOC:bf","GOC:signaling","PMID:20855508","GOC:BHF","PMID:12482908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transforming growth factor beta receptor signaling pathway","termid":"GO:0030512"},{"relation_name":"is_a","term_name":"sequestering of extracellular ligand from receptor","termid":"GO:0035581"},{"relation_name":"is_a","term_name":"maintenance of protein location in extracellular region","termid":"GO:0071694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"sequestering of TGFbeta in extracellular matrix","synonyms":[{"name":"negative regulation of transforming growth factor beta receptor signaling pathway by extracellular matrix sequestering of TGFbeta","type":"exact"},{"name":"negative regulation of transforming growth factor beta receptor signalling pathway by extracellular matrix sequestering of TGFbeta","type":"exact"},{"name":"sequestering of TGFbeta LLC in extracellular matrix","type":"exact"},{"name":"sequestering of TGFbeta large latency complex in extracellular matrix","type":"exact"}],"termid":"GO:0035583"}


id: PBO:0051485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily member 3","termid":"PBO:0051485"}


id: GO:0019247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Partial conversion of one lactate enantiomer into another so that the specific optical rotation is decreased, or even reduced to zero, in the resulting mixture.","definition_xrefs":["PMID:16166538","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate metabolic process","termid":"GO:0006089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"lactate racemization","termid":"GO:0019247"}


id: PBO:0049938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERV-H LTR-associating 2","termid":"PBO:0049938"}


id: GO:0006364
data:
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id: CHEBI:48607
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  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A metal chloride salt with a Li(+) counterion.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lithium chloride","termid":"CHEBI:48607"}


id: PBO:0046757
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id: FYPO:0006566
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id: MOD:00103
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to L-phenylalanine amide.","definition_xrefs":["RESID:AA0094","PubMed:8868490","PubMed:2905621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-phenylalanine amide","synonyms":[{"name":"(2S)-2-amino-3-phenylpropanamide","type":"exact"},{"name":"L-phenylalanine amide","type":"exact"},{"name":"MOD_RES Phenylalanine amide","type":"exact"},{"name":"PheN","type":"exact"},{"name":"amidated L-phenylalanine","type":"exact"},{"name":"phenylalaninamide","type":"exact"}],"termid":"MOD:00103"}


id: GO:0004512
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id: PBO:0091646
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id: FYPO:0005128
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id: GO:0030501
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id: PBO:0011985
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id: PBO:0031860
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id: GO:2001316
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id: GO:0021810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Signaling by neurotransmitters and their receptors that results in the initiation of movement of cells as a component of the process of glial-mediated radial migration.","definition_xrefs":["GOC:jid","GOC:dgh","GO_REF:0000021","GOC:cls","PMID:12626695","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter signaling initiating cell movement, involved in cerebral cortex radial glia guided migration (obsolete GO:0021810)","synonyms":[{"name":"neurotransmitter signalling initiating cell movement, involved in cerebral cortex glial-mediated radial migration","type":"exact"}],"termid":"GO:0021810"}


id: PBO:0079556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 9","termid":"PBO:0079556"}


id: GO:1901216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of neuron death.","definition_xrefs":["GOC:TermGenie","GOC:rph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of neuron death (obsolete GO:1901216)","synonyms":[{"name":"activation of neuron cell death","type":"narrow"},{"name":"activation of neuron death","type":"narrow"},{"name":"activation of neuronal cell death","type":"narrow"},{"name":"positive regulation of neuron cell death","type":"exact"},{"name":"positive regulation of neuronal cell death","type":"exact"},{"name":"up regulation of neuron cell death","type":"exact"},{"name":"up regulation of neuron death","type":"exact"},{"name":"up regulation of neuronal cell death","type":"exact"},{"name":"up-regulation of neuron cell death","type":"exact"},{"name":"up-regulation of neuron death","type":"exact"},{"name":"up-regulation of neuronal cell death","type":"exact"},{"name":"upregulation of neuron cell death","type":"exact"},{"name":"upregulation of neuron death","type":"exact"},{"name":"upregulation of neuronal cell death","type":"exact"}],"termid":"GO:1901216"}


id: GO:0035405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by addition of a phosphate group to a threonine residue.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone-threonine phosphorylation (obsolete GO:0035405)","synonyms":[{"name":"histone threonine phosphorylation","type":"exact"}],"termid":"GO:0035405"}


id: GO:0006757
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into ADP, adenosine diphosphate, to produce ATP.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete ATP generation from ADP (obsolete GO:0006757)","synonyms":[{"name":"ADP phosphorylation","type":"exact"}],"termid":"GO:0006757"}


id: PBO:0004285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF866 domain protein","termid":"PBO:0004285"}


id: FYPO:0004551
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to ionizing radiation exposure during mitotic S phase is abnormal. Normally, cell cycle progression is slowed or arrested transiently following exposure to ionizing radiation. The most common abnormality is for the cell cycle to progress as in the absence of ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to ionizing radiation","termid":"FYPO:0003489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to ionizing radiation during mitotic S phase","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to ionizing radiation during mitotic S phase","type":"exact"},{"name":"abnormal mitotic cell cycle delay following ionizing radiation during mitotic S phase","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to IR during mitotic S phase","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to ionizing radiation during mitotic S phase during mitotic cell cycle","type":"related"},{"name":"abnormal mitotic cell cycle regulation during cellular response to ionizing radiation during mitotic S phase during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to ionizing radiation during mitotic S phase","type":"exact"}],"termid":"FYPO:0004551"}


id: GO:0098705
data:
  {"annotated_genes":["SJAG_01493","SJAG_04246"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84020,110668],"is_not":false,"summary":null,"term":"GO:0098705"}]},"cv_name":"biological_process","definition":"The directed movement of copper ions from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane copper ion transport","termid":"GO:0015679"},{"relation_name":"is_a","term_name":"inorganic cation import across plasma membrane","termid":"GO:0098659"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01493":null,"SJAG_04246":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"copper ion import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015678","GO:1902861"],"synonyms":[{"name":"copper cation import into cell","type":"exact"},{"name":"copper ion import into cell","type":"exact"},{"name":"high affinity copper ion transport","type":"narrow"},{"name":"high affinity copper transport","type":"narrow"},{"name":"high-affinity copper ion transport","type":"narrow"}],"termid":"GO:0098705","terms_by_termid":{"GO:0098705":null}}


id: SO:0000946
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region specifically recognised by a recombinase, which inserts or removes another region marked by a distinct cognate integration/excision site.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"site_specific_recombination_target_region","termid":"SO:0000342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integration_excision_site","synonyms":[{"name":"attachment site","type":"related"},{"name":"integration excision site","type":"exact"}],"termid":"SO:0000946"}


id: PBO:0029295
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_G0_to_G1_transition","termid":"PBO:0029295"}


id: PBO:0001867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine hydroxymethyltransferase (predicted)","termid":"PBO:0001867"}


id: PBO:0004509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YjgF family protein Mmf1","termid":"PBO:0004509"}


id: GO:0018079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of a halogen to a protein amino acid.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein halogenation (obsolete GO:0018079)","synonyms":[{"name":"protein amino acid halogenation","type":"exact"}],"termid":"GO:0018079"}


id: GO:0030154
data:
  {"annotated_genes":["SJAG_04470","SJAG_03581","SJAG_03536","SJAG_01662","SJAG_01483","SJAG_00514","SJAG_03057","SJAG_02248","SJAG_03557","SJAG_04859","SJAG_01531","SJAG_02529","SJAG_04483","SJAG_04781","SJAG_00971","SJAG_04010","SJAG_03250","SJAG_02392","SJAG_00486","SJAG_04140","SJAG_02169","SJAG_04853","SJAG_00993","SJAG_00663","SJAG_04615","SJAG_03090","SJAG_01321","SJAG_02736","SJAG_03013","SJAG_04868","SJAG_04275","SJAG_04238","SJAG_04184","SJAG_00821","SJAG_04922","SJAG_02320","SJAG_02241","SJAG_03746","SJAG_03587","SJAG_04901","SJAG_04236","SJAG_05309","SJAG_03688","SJAG_03483","SJAG_04271","SJAG_00114","SJAG_00826","SJAG_02712","SJAG_04080","SJAG_03915","SJAG_00974","SJAG_00405","SJAG_01769"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91918,85940,90647],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0051519"},{"annotations":[91441,103789,108787,110017,114625,92943,107588,93011,96796,101183,106185,92596,100208],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030437"},{"annotations":[90533],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[84291,84781,86319,87828,113864],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[105367],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[110161,100251,105143,113874,113865],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[105368,106186,93657,87559,101034],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031321"},{"annotations":[94893,87352,114626,110018,97781,115108,114922,95968,93658,91442,93617,103454,106187,113019,101350,95898,95899],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[92944,93618,102896,103790,110019,95900,100209,88349,98996,95901],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[107276],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[86794],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051517"},{"annotations":[98366],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[86796],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[88244],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[102073,95903,95902,90574,96186,112054],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The cellular developmental process in which a relatively unspecialized cell, e.g. embryonic or regenerative cell, acquires specialized structural and/or functional features that characterize a specific cell. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_00993":null,"SJAG_01321":null,"SJAG_01483":null,"SJAG_01531":null,"SJAG_01662":null,"SJAG_01769":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02392":null,"SJAG_02529":null,"SJAG_02712":null,"SJAG_02736":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03090":null,"SJAG_03250":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03557":null,"SJAG_03581":null,"SJAG_03587":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04140":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04853":null,"SJAG_04859":null,"SJAG_04868":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell differentiation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Cellular_differentiation"],"termid":"GO:0030154","terms_by_termid":{"GO:0030437":null,"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0051517":null,"GO:0051519":null,"GO:0070583":null,"GO:0070591":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: GO:2000422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of eosinophil chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of granulocyte chemotaxis","termid":"GO:0071622"},{"relation_name":"is_a","term_name":"regulation of eosinophil migration","termid":"GO:2000416"},{"relation_name":"regulates","term_name":"eosinophil chemotaxis","termid":"GO:0048245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of eosinophil chemotaxis","termid":"GO:2000422"}


id: PBO:0063517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal dependent decarboxylase domain containing 2, pseudogene","termid":"PBO:0063517"}


id: PBO:0001993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S6 (predicted)","termid":"PBO:0001993"}


id: GO:0052841
data:
  {"annotated_genes":["SJAG_04870","SJAG_01154","SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84799,101259,111140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052846"},{"annotations":[101260,84800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052847"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: bisdiphospho-1D-myo-inositol tetrakisphosphate + H2O = diphospho-1D-myo-inositol pentakisphosphate + phosphate.","definition_xrefs":["PMID:11502751","PMID:10827188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol-polyphosphate diphosphatase activity","termid":"GO:0008486"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_01154":null,"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"inositol bisdiphosphate tetrakisphosphate diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1855165","Reactome:R-HSA-2023973"],"termid":"GO:0052841","terms_by_termid":{"GO:0052846":null,"GO:0052847":null}}


id: GO:0033645
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collection of membranous structures involved in transport within the host cell. The main components of the endomembrane system are endoplasmic reticulum, Golgi bodies, vesicles, cell membrane and nuclear envelope. Members of the endomembrane system pass materials through each other or though the use of vesicles. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell membrane","termid":"GO:0033644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endomembrane system","termid":"GO:0033645"}


id: PBO:0082616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coiled-coil protein involved in spindle-assembly checkpoint; required for inhibition of karyopherin/importin Pse1p (aka Kap121p) upon spindle assembly checkpoint arrest; phosphorylated by Mps1p upon checkpoint activation which leads to inhibition of anaphase promoting complex activity; forms a complex with Mad2p; gene dosage imbalance between MAD1 and MAD2 leads to chromosome instability","termid":"PBO:0082616"}


id: PBO:0087075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L37A; required for processing of 27SB pre-rRNA and formation of stable 66S assembly intermediates; homologous to mammalian ribosomal protein L37, no bacterial homolog; RPL37A has a paralog, RPL37B, that arose from the whole genome duplication","termid":"PBO:0087075"}


id: PBO:0082934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic ATPase that is a ribosome-associated molecular chaperone; functions with J-protein partner Zuo1p; may be involved in folding of newly-made polypeptide chains; member of the HSP70 family; interacts with phosphatase subunit Reg1p; SSB1 has a paralog, SSB2, that arose from the whole genome duplication","termid":"PBO:0082934"}


id: PBO:0057619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1184-2","termid":"PBO:0057619"}


id: PBO:0043972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin zeta pseudogene 2","termid":"PBO:0043972"}


id: SO:0002307
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of DNA between two loop anchor positions that are held in close physical proximity.","definition_xrefs":["GREEKC:cl","PMID:32782014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"},{"relation_name":"overlaps","term_name":"topologically_associated_domain","termid":"SO:0002304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA_loop","synonyms":[{"name":"DNA loop","type":"exact"}],"termid":"SO:0002307"}


id: GO:0001723
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. High molecular weight (100-300 kDa) proteins that associate with intermediate filaments to cross-link them into loose networks.","definition_xrefs":["PMID:9484600","GOC:ajp"],"gene_count":0,"genotype_count":0,"name":"obsolete type II intermediate filament associated protein (obsolete GO:0001723)","synonyms":[{"name":"type II intermediate filament associated protein","type":"exact"}],"termid":"GO:0001723"}


id: GO:0000937
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A septum, or cross-wall, between two portions of a cell or hypha; contains a central pore around which the septum is swollen to form a barrel-shaped structure; pore is covered on each side of the septum by a septal pore cap (parenthosome).","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porous cell septum","termid":"GO:0000934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dolipore septum","termid":"GO:0000937"}


id: PBO:0089950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm2-8 complex subunit Lsm4","termid":"PBO:0089950"}


id: SO:0001668
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA segment that ranges from about -250 to -40 relative to +1 of RNA transcription start site, where sequence specific DNA-binding transcription factors binds, such as Sp1, CTF (CCAAT-binding transcription factor), and CBF (CCAAT-box binding factor).","definition_xrefs":["PMID:12515390","PMID:9679020","SO:ml"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_promoter_element","termid":"SO:0001678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proximal_promoter_element","synonyms":[{"name":"proximal promoter element","type":"related"},{"name":"specific transcription factor binding site","type":"related"}],"termid":"SO:0001668"}


id: GO:0120010
data:
  {"annotated_genes":["SJAG_00230","SJAG_03851","SJAG_03338","SJAG_03710","SJAG_01229","SJAG_04370","SJAG_01225","SJAG_03416","SJAG_01305","SJAG_03172","SJAG_16459","SJAG_03721","SJAG_03741","SJAG_05268","SJAG_03746"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85302,86969,93559,93620,94700,96593,97353,100124,101907,102803,103590,103719,104720,105592,112334],"is_not":false,"summary":null,"term":"GO:0120010"}]},"cv_name":"biological_process","definition":"The transport of phospholipids between membranes in which a phospholipid molecule is transported through an aqueous phase from the outer leaflet of a donor membrane to the outer leaflet of an acceptor membrane.","definition_xrefs":["PMID:20823909","GOC:krc","PMID:25797198","PMID:24220498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transport","termid":"GO:0015914"},{"relation_name":"is_a","term_name":"intermembrane lipid transfer","termid":"GO:0120009"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00230":null,"SJAG_01225":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_03172":null,"SJAG_03338":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null,"SJAG_03851":null,"SJAG_04370":null,"SJAG_05268":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0061024","GO:0051179"],"is_obsolete":false,"name":"intermembrane phospholipid transfer","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120010","terms_by_termid":{"GO:0120010":null}}


id: GO:0060761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of a response to cytokine stimulus.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to cytokine stimulus","termid":"GO:0060759"},{"relation_name":"negatively_regulates","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to cytokine stimulus","termid":"GO:0060761"}


id: GO:0071274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of isoquinoline alkaloids, alkaloid compounds that contain bicyclic N-containing aromatic rings and are derived from a 3,4-dihydroxytyramine (dopamine) precursor that undergoes a Schiff base addition with aldehydes of different origin.","definition_xrefs":["GOC:mah","PMID:23666088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid catabolic process","termid":"GO:0009822"},{"relation_name":"is_a","term_name":"isoquinoline alkaloid metabolic process","termid":"GO:0033076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"isoquinoline alkaloid catabolic process","synonyms":[{"name":"ipecac alkaloid catabolism","type":"related"},{"name":"isoquinoline alkaloid breakdown","type":"exact"},{"name":"isoquinoline alkaloid catabolism","type":"exact"},{"name":"isoquinoline alkaloid degradation","type":"exact"}],"termid":"GO:0071274"}


id: GO:1902678
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any ciliary basal body that is part of a right caudal flagellum found in Giardia species (trophozoite stage).","definition_xrefs":["PMID:5961344","GOC:giardia","GO_REF:0000064","GOC:TermGenie","PMID:16607022","ISBN:9780124260207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary basal body","termid":"GO:0036064"},{"relation_name":"part_of","term_name":"right caudal flagellum","termid":"GO:0097561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"right caudal basal body","synonyms":[{"name":"cilial basal body of right caudal cilium","type":"exact"},{"name":"cilial basal body of right caudal flagellum","type":"exact"},{"name":"ciliary basal body of right caudal cilium","type":"exact"},{"name":"ciliary basal body of right caudal flagellum","type":"exact"},{"name":"cilium basal body of right caudal cilium","type":"exact"},{"name":"cilium basal body of right caudal flagellum","type":"exact"},{"name":"microtubule basal body of right caudal cilium","type":"exact"},{"name":"microtubule basal body of right caudal flagellum","type":"exact"},{"name":"right caudal flagellum ciliary basal body","type":"exact"}],"termid":"GO:1902678"}


id: PBO:0113359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for sporulation; localizes to the peroxisome","termid":"PBO:0113359"}


id: GO:0140493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A fatty acid beta-oxidation pathway acting on a very long-chain fatty acid. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons. The partway stars with the conversion of an acyl-CoA to a trans-2-enoyl-CoA, catalyzed by acyl-CoA oxidase; the electrons removed by oxidation pass directly to oxygen and produce hydrogen peroxide, which is cleaved by peroxisomal catalases. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and ends when only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).","definition_xrefs":["PMID:32169171","GOC:ha","PMID:17028011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid beta-oxidation using acyl-CoA oxidase","termid":"GO:0033540"},{"relation_name":"is_a","term_name":"very long-chain fatty acid catabolic process","termid":"GO:0042760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"very long-chain fatty acid beta-oxidation","termid":"GO:0140493"}


id: GO:0120236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of posttranslational protein translocation through the ER membrane.","definition_xrefs":["GOC:rn","PMID:32513868","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of intracellular protein transport","termid":"GO:0090317"},{"relation_name":"is_a","term_name":"regulation of post-translational protein targeting to membrane, translocation","termid":"GO:0120235"},{"relation_name":"negatively_regulates","term_name":"post-translational protein targeting to membrane, translocation","termid":"GO:0031204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of post-translational protein targeting to membrane, translocation","synonyms":[{"name":"negative regulation of N-terminal signal peptide-independent translocation into the ER","type":"narrow"},{"name":"negative regulation of SRP-independent endoplasmic reticulum protein-membrane targeting, translocation","type":"narrow"},{"name":"negative regulation of posttranslational endoplasmic reticulum membrane protein translocation","type":"exact"},{"name":"negative regulation of posttranslational protein targeting to membrane, translocation","type":"exact"}],"termid":"GO:0120236"}


id: GO:0070356
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptotagmin, synaptobrevin 2 (VAMP2), SNAP-25, syntaxin 1a, syntaxin1b, and Rab3a (or orthologs thereof).","definition_xrefs":["PMID:7654227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"synaptotagmin-synaptobrevin 2-SNAP-25-syntaxin-1a-syntaxin-1b-Rab3a complex","synonyms":[{"name":"SNARE complex (STX1a, STX1b, SNAP25, RAB3a, SYT1, VAMP2)","type":"narrow"},{"name":"STX1a-STX1b-SNAP25-RAB3a-SYT1-VAMP2 complex","type":"narrow"}],"termid":"GO:0070356"}


id: GO:0035456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-beta stimulus. Interferon-beta is a type I interferon.","definition_xrefs":["GOC:sl","PMID:9561374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interferon-beta","synonyms":[{"name":"response to beta-1 interferon","type":"related"},{"name":"response to fiblaferon","type":"exact"},{"name":"response to fibroblast interferon","type":"exact"},{"name":"response to interferon beta","type":"exact"}],"termid":"GO:0035456"}


id: MOD:00454
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a quaternary amine reagent heavy (+3amu) form group.","definition_xrefs":["Unimod:61","PubMed:11857757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quaternary amine labeling reagent heavy form (+3amu) (N-term & K)","synonyms":[{"name":"GIST-Quat:2H(3)","type":"related"},{"name":"Quaternary amine labeling reagent heavy (+3amu) form, N-term & K","type":"related"}],"termid":"MOD:00454"}


id: PBO:0066113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS guanyl releasing protein 4","termid":"PBO:0066113"}


id: PBO:0084334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin-related motor protein; tracks plus-ends and stabilizes microtubules; required for mitotic spindle assembly, chromosome segregation, and 2 micron plasmid partitioning; functionally redundant with Cin8p for chromosomal but not plasmid functions","termid":"PBO:0084334"}


id: PBO:0075482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily C member 2","termid":"PBO:0075482"}


id: PBO:0080988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB20 antisense RNA 4","termid":"PBO:0080988"}


id: GO:0061567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into dCMP, deoxycytidine monophosphate, to produce dCDP. Addition of two phosphate groups produces dCTP.","definition_xrefs":["GOC:dph","PMID:23416111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate phosphorylation","termid":"GO:0046940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"dCMP phosphorylation","termid":"GO:0061567"}


id: SO:0002224
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that codes for a 2A self-cleaving polypeptide region, which is a region that can result in a break in the peptide sequence at its terminal G-P junction.","definition_xrefs":["PMID:22301656","PMID:28526819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"2A_self_cleaving_peptide_region","synonyms":[{"name":"2A polypeptide region","type":"related"},{"name":"2A self-cleaving polypeptide region","type":"related"}],"termid":"SO:0002224"}


id: PBO:0028259
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3K9me_binding","termid":"PBO:0028259"}


id: PBO:0004092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-cytochrome p450 reductase","termid":"PBO:0004092"}


id: PBO:0057022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR122 host gene","termid":"PBO:0057022"}


id: PBO:0074779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3 pseudogene 1","termid":"PBO:0074779"}


id: GO:1990272
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with anti-Mullerian hormone to initiate a change in cell activity.","definition_xrefs":["GOC:hjd","PMID:23624077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"anti-Mullerian hormone receptor activity","termid":"GO:1990272"}


id: PBO:0061389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 49","termid":"PBO:0061389"}


id: PBO:0059971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 16","termid":"PBO:0059971"}


id: PBO:0004928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog3 (predicted)","termid":"PBO:0004928"}


id: SO:0002264
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"LTR retrotransposons in the Copia superfamily contain elements coding for specific proteins in this order: GAG, AP, INT, RT, RH. GAG is a structural protein for virus-like particles. AP is aspartic proteinase. INT is a DDE integrase. RT is a reverse transcriptase. RH is RNAse H.","definition_xrefs":["PMID:17984973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copia_LTR_retrotransposon","synonyms":[{"name":"Copia LTR retrotransposon","type":"exact"},{"name":"RLC retrotransposon","type":"exact"},{"name":"Ty1 retrotransposon","type":"exact"}],"termid":"SO:0002264"}


id: GO:0008294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate, stimulated by calcium-bound calmodulin.","definition_xrefs":["PMID:1739965","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase activity","termid":"GO:0004016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0009975","GO:0016829"],"is_obsolete":false,"name":"calcium- and calmodulin-responsive adenylate cyclase activity","secondary_identifiers":["Reactome:R-HSA-442715","Reactome:R-HSA-111930"],"synonyms":[{"name":"calcium- and calmodulin-responsive adenylyl cyclase activity","type":"exact"},{"name":"calcium/calmodulin-responsive adenylate cyclase activity","type":"exact"}],"termid":"GO:0008294"}


id: GO:0006004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving fucose, or 6-deoxygalactose, which has two enantiomers, D-fucose and L-fucose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"fucose metabolic process","synonyms":[{"name":"fucose metabolism","type":"exact"}],"termid":"GO:0006004"}


id: PBO:0044019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSNK1G2 antisense RNA 1","termid":"PBO:0044019"}


id: PBO:0087749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the THO complex; THO is required for efficient transcription elongation and involved in transcriptional elongation-associated recombination; required for LacZ RNA expression from certain plasmids","termid":"PBO:0087749"}


id: PBO:0043303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 20A","termid":"PBO:0043303"}


id: GO:0032598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a B cell receptor into an immunological synapse.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor transport into membrane raft","termid":"GO:0032597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0061024","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"B cell receptor transport into immunological synapse","synonyms":[{"name":"B cell receptor translocation into immunological synapse","type":"exact"},{"name":"BCR translocation into immunological synapse","type":"exact"},{"name":"BCR transport into immunological synapse","type":"exact"}],"termid":"GO:0032598"}


id: PBO:0076753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teratocarcinoma-derived growth factor 1 pseudogene 3","termid":"PBO:0076753"}


id: GO:0098811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to an RNA polymerase II activating transcription factor and also with the RNA polymerase II basal transcription machinery in order to stop, prevent, or reduce the frequency, rate or extent of transcription.","definition_xrefs":["GOC:dos","GOC:rl","GOC:BHF","GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcriptional repressor activity, RNA polymerase II activating transcription factor binding (obsolete GO:0098811)","synonyms":[{"name":"RNA polymerase II activating transcription factor binding transcription factor activity involved in negative regulation of transcription","type":"exact"},{"name":"RNA polymerase II activating transcription factor binding transcription repressor activity","type":"exact"},{"name":"RNA polymerase II transcription repressor activity","type":"broad"}],"termid":"GO:0098811"}


id: FYPO:0008137
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which lipid droplets are smaller and more numerous than normal.","definition_xrefs":["PMID:35658118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal lipid droplet organization","termid":"FYPO:0000808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased size and number of lipid droplets","termid":"FYPO:0008137"}


id: GO:0001134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The function of binding to an RNA polymerase (RNAP) transcription regulator and recruiting it to the general transcription machinery complex in order to modulate transcription initiation.","definition_xrefs":["PMID:16858867","GOC:txnOH-2018"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription regulator recruiting activity (obsolete GO:0001134)","synonyms":[{"name":"transcription factor activity, transcription factor recruiting","type":"related"},{"name":"transcription factor recruiting activity","type":"exact"},{"name":"transcription factor recruiting transcription factor activity","type":"exact"}],"termid":"GO:0001134"}


id: PBO:0072524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 53","termid":"PBO:0072524"}


id: GO:0086009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the membrane potential changes in the repolarizing direction, toward the steady state potential. For example, the repolarization during an action potential is from a positive membrane potential towards a negative resting potential.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane repolarization","termid":"GO:0086009"}


id: FYPO:0007353
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is normal (i.e. indistinguishable from wild type) at a cis-acting homologous chromosome pairing region on chromosome 2.","definition_xrefs":["PMID:31811152","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 2","synonyms":[{"name":"normal homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region on chromosome 2","type":"exact"},{"name":"normal homologous chromosome pairing at sme2 locus","type":"narrow"},{"name":"normal synapsis at cis-acting homologous chromosome pairing region on chromosome 2","type":"exact"}],"termid":"FYPO:0007353"}


id: PBO:0003569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H and G-patch domain, implicated in splicing (predicted)","termid":"PBO:0003569"}


id: PBO:0113557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex beta subunit Wbp1","termid":"PBO:0113557"}


id: GO:0070408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving carbamoyl phosphate, an intermediate in the urea cycle and other nitrogen compound metabolic pathways.","definition_xrefs":["CHEBI:17672","GOC:mah","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbamoyl phosphate metabolic process","secondary_identifiers":["UM-BBD_pathwayID:bzn"],"synonyms":[{"name":"carbamoyl phosphate metabolism","type":"exact"}],"termid":"GO:0070408"}


id: PBO:0083136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual-specificity protein phosphatase; maintains low levels of both basal and induced cell integrity pathway signaling by dephosphorylation of the Slt2p MAPK; reciprocally regulated by Slt2p through phosphorylation; minor role with Ptp2p in the adaptive response to pheromone through the dephosphorylation of the Fus3p MAPK with major contribution by Ptp3p; inhibits the nuclear accumulation of Fus3p; two isoforms exist as the result of alternative translation initiation starts","termid":"PBO:0083136"}


id: PATO:0001980
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having distinct parts arising from a common point or center.","definition_xrefs":["thefreedictionary:thefreedictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"digitate","termid":"PATO:0001980"}


id: GO:0031071
data:
  {"annotated_genes":["SJAG_00186"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102947],"is_not":false,"summary":null,"term":"GO:0031071"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteine + [enzyme]-cysteine = L-alanine + [enzyme]-S-sulfanylcysteine.","definition_xrefs":["EC:2.8.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016782","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"cysteine desulfurase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1362408","Reactome:R-HSA-947514","RHEA:43892"],"synonyms":[{"name":"IscS","type":"related"},{"name":"L-cysteine:enzyme cysteine sulfurtransferase activity","type":"related"},{"name":"NIFS","type":"related"},{"name":"SufS","type":"related"},{"name":"cysteine desulfurylase activity","type":"related"}],"termid":"GO:0031071","terms_by_termid":{"GO:0031071":null}}


id: PBO:0055095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2513","termid":"PBO:0055095"}


id: GO:0042150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of DNA recombination occurring within a plasmid or between plasmids and other plasmids or DNA molecules.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"plasmid recombination","termid":"GO:0042150"}


id: FYPO:0004544
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of heterochromatin maintenance is longer than normal. Heterochromatin maintenance is the process that preserves heterochromatin in a stable functional or structural state.","definition_xrefs":["GO:0070829","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin organization during vegetative growth","termid":"FYPO:0004543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"increased duration of heterochromatin maintenance","synonyms":[{"name":"increased duration of heterochromatin maintenance during mitotic cell cycle","type":"related"},{"name":"increased duration of heterochromatin maintenance during vegetative growth","type":"exact"},{"name":"prolonged heterochromatin maintenance","type":"exact"}],"termid":"FYPO:0004544"}


id: PBO:0077356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 97","termid":"PBO:0077356"}


id: PBO:0075430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm protein associated with the nucleus, X-linked, family member A1","termid":"PBO:0075430"}


id: PBO:0091083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V0 subunit e","termid":"PBO:0091083"}


id: GO:0080100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + 2-oxoglutarate = 2-oxoglutaramate + L-glutamate.","definition_xrefs":["PMID:18394996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamine aminotransferase activity","termid":"GO:0070548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016769","GO:0016740"],"is_obsolete":false,"name":"L-glutamine:2-oxoglutarate aminotransferase activity","secondary_identifiers":["EC:2.6.1.50"],"synonyms":[{"name":"L-glutamine:alpha-ketoglutarate aminotransferase activity","type":"exact"}],"termid":"GO:0080100"}


id: GO:0062082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a MHC class Ib molecule of the HLA-A subclass to mediate signaling that inhibits activation of a lymphocyte.","definition_xrefs":["DOI:10.1002/9780470015902.a0024246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibitory MHC class Ib receptor activity","termid":"GO:0062080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"HLA-E specific inhibitory MHC class Ib receptor activity","termid":"GO:0062082"}


id: PBO:0079465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TVP23C pseudogene 1","termid":"PBO:0079465"}


id: PBO:0083186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized gene CTS2/YDR371W; identified by expression profiling and mass spectrometry","termid":"PBO:0083186"}


id: PBO:0074052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 32","termid":"PBO:0074052"}


id: PATO:0002530
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"obsolete episodic (obsolete PATO:0002530)","termid":"PATO:0002530"}


id: PBO:0081275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 41","termid":"PBO:0081275"}


id: PR:Q9UTC6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An iron-sulfur cluster assembly enzyme ISCU, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00204","PANTHER:PTHR10093:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron sulfur cluster assembly protein 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.13c","secondary_identifiers":["UniProtKB:Q9UTC6"],"synonyms":[{"name":"Spom972h-ISCU","type":"exact"},{"name":"iron sulfur cluster scaffold protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTC6"}


id: PBO:0053790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1043","termid":"PBO:0053790"}


id: GO:0035341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of inosine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of purine nucleoside transport","termid":"GO:0032245"},{"relation_name":"regulates","term_name":"inosine transport","termid":"GO:0035340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of inosine transport","synonyms":[{"name":"regulation of hypoxanthine riboside transport","type":"exact"}],"termid":"GO:0035341"}


id: GO:0051542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of elastin, a fibrous glycoprotein found in elastic tissues such as the walls of arteries.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"},{"relation_name":"is_a","term_name":"elastin metabolic process","termid":"GO:0051541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"elastin biosynthetic process","termid":"GO:0051542"}


id: GO:0004337
data:
  {"annotated_genes":["SJAG_03352","SJAG_00580"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95666,105551],"is_not":false,"summary":null,"term":"GO:0004337"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate + isopentenyl diphosphate = 2-trans,6-trans-farnesyl diphosphate + diphosphate.","definition_xrefs":["EC:2.5.1.10","RHEA:19361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00580":null,"SJAG_03352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016765","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"geranyltranstransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-191303","MetaCyc:FPPSYN-RXN","KEGG_REACTION:R02003","Reactome:R-HSA-8870469","Reactome:R-HSA-9717830"],"synonyms":[{"name":"FPP synthetase activity","type":"related"},{"name":"farnesyl diphosphate synthetase activity","type":"related"},{"name":"farnesyl pyrophosphate synthetase activity","type":"exact"},{"name":"farnesyl-diphosphate synthase activity","type":"exact"},{"name":"farnesylpyrophosphate synthetase activity","type":"related"},{"name":"geranyl transferase I","type":"related"},{"name":"geranyl-diphosphate:isopentenyl-diphosphate geranyltranstransferase activity","type":"related"},{"name":"geranyltransferase activity","type":"related"}],"termid":"GO:0004337","terms_by_termid":{"GO:0004337":null}}


id: PBO:0067470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 600, pseudogene","termid":"PBO:0067470"}


id: GO:0090331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of platelet aggregation. Platelet aggregation is the adhesion of one platelet to one or more other platelets via adhesion molecules.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of platelet activation","termid":"GO:0010544"},{"relation_name":"is_a","term_name":"negative regulation of homotypic cell-cell adhesion","termid":"GO:0034111"},{"relation_name":"is_a","term_name":"regulation of platelet aggregation","termid":"GO:0090330"},{"relation_name":"negatively_regulates","term_name":"platelet aggregation","termid":"GO:0070527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of platelet aggregation","synonyms":[{"name":"platelet disaggregation","type":"narrow"}],"termid":"GO:0090331"}


id: PBO:0067472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 602, pseudogene","termid":"PBO:0067472"}


id: FYPO:0000387
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of biofilm formation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal biofilm formation","termid":"FYPO:0000630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased biofilm formation","synonyms":[{"name":"biofilm formation: decreased","type":"related"},{"name":"reduced biofilm formation","type":"exact"}],"termid":"FYPO:0000387"}


id: PBO:0030597
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_substance_in_cytosol","termid":"PBO:0030597"}


id: PBO:0040048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPC1A pseudogene 4","termid":"PBO:0040048"}


id: GO:0102789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + cyanidin = H+ + cyanidin 5-O-beta-D-glucoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-D-glucose:cyanidin 5-O-beta-D-glucosyltransferase activity (obsolete GO:0102789)","termid":"GO:0102789"}


id: GO:0005838
data:
  {"annotated_genes":["SJAG_03638","SJAG_01203","SJAG_00762","SJAG_04484","SJAG_04477","SJAG_04088","SJAG_01544","SJAG_03321","SJAG_03408","SJAG_00738","SJAG_00712","SJAG_02992","SJAG_04144","SJAG_02900","SJAG_01489","SJAG_00766","SJAG_01131","SJAG_04211","SJAG_04572","SJAG_01652"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[106313,109123],"is_not":false,"summary":null,"term":"GO:0005838"},{"annotations":[111268,113511,103141,109124,100150,92821,106314,101399,95012],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008540"},{"annotations":[92471,84932,95013,97722,107306,111347,100427,111238,105373,98179,90228,93171,94870],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008541"}]},"cv_name":"cellular_component","definition":"A multisubunit complex, which caps one or both ends of the proteasome core complex. This complex recognizes and unfolds ubiquitinated proteins, and translocates them to the proteasome core complex.","definition_xrefs":["GOC:mtg_sensu","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"proteasome accessory complex","termid":"GO:0022624"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00712":null,"SJAG_00738":null,"SJAG_00762":null,"SJAG_00766":null,"SJAG_01131":null,"SJAG_01203":null,"SJAG_01489":null,"SJAG_01544":null,"SJAG_01652":null,"SJAG_02900":null,"SJAG_02992":null,"SJAG_03321":null,"SJAG_03408":null,"SJAG_03638":null,"SJAG_04088":null,"SJAG_04144":null,"SJAG_04211":null,"SJAG_04477":null,"SJAG_04484":null,"SJAG_04572":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proteasome regulatory particle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"19S regulatory particle","type":"narrow"},{"name":"PA700 proteasome activator","type":"narrow"},{"name":"PA700-dependent proteasome activator","type":"exact"},{"name":"modulator complex","type":"related"}],"termid":"GO:0005838","terms_by_termid":{"GO:0005838":null,"GO:0008540":null,"GO:0008541":null}}


id: PBO:0048656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein epsilon 1","termid":"PBO:0048656"}


id: PBO:0086421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GTPase peripheral to the mitochondrial inner membrane; essential for respiratory competence, likely functions in assembly of the large ribosomal subunit, has homologs in plants and animals","termid":"PBO:0086421"}


id: GO:0090548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of nitrate.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nitrate starvation","termid":"GO:0090548"}


id: PBO:0067764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 64","termid":"PBO:0067764"}


id: PBO:0046281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elastin microfibril interfacer 3","termid":"PBO:0046281"}


id: FYPO:0007021
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional methylation of a cytosine residue in a tRNA molecule to form 2'-O-methylcytidine does not occur.","definition_xrefs":["PomBase:mah","PMID:25404562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA methylation","termid":"FYPO:0001766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000294","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished tRNA cytosine 2'-O-methylation","synonyms":[{"name":"2'-O-methylcytidine absent from tRNA","type":"related"},{"name":"abolished tRNA 2'-O-methylcytidine formation","type":"exact"},{"name":"abolished tRNA Cm formation","type":"exact"},{"name":"abolished tRNA cytosine 2'-O-methylation during mitotic cell cycle","type":"related"},{"name":"abolished tRNA cytosine 2'-O-methylation during vegetative growth","type":"exact"},{"name":"tRNA cytosine 2'-O-methylation abolished","type":"related"}],"termid":"FYPO:0007021"}


id: PBO:0052025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctophilin 3","termid":"PBO:0052025"}


id: PBO:0083847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; has similarity to E. coli RNase PH and to human hRrp41p (EXOSC4)","termid":"PBO:0083847"}


id: GO:0008224
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Inhibits the growth of, or directly kills, Gram-positive bacterial cells.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete Gram-positive antibacterial peptide activity (obsolete GO:0008224)","synonyms":[{"name":"Gram-positive antibacterial peptide activity","type":"exact"}],"termid":"GO:0008224"}


id: GO:1990865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an episodic stimulus indicating lowered oxygen tension.","definition_xrefs":["PMID:24055447"],"gene_count":0,"genotype_count":0,"name":"obsolete response to intermittent hypoxia (obsolete GO:1990865)","termid":"GO:1990865"}


id: PBO:0053439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 384","termid":"PBO:0053439"}


id: PBO:0065223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 5","termid":"PBO:0065223"}


id: GO:0180009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: basic L-amino acid(in) + neutral L-amino acid(out) = basic L-amino acid(in) + neutral L-amino acid(out).","definition_xrefs":["PMID:23506863","PMID:8663357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basic amino acid transmembrane transporter activity","termid":"GO:0015174"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"broad specificity neutral L-amino acid:basic L-amino acid antiporter activity","synonyms":[{"name":"neutral L-amino acid:cationic L-amino acid antiporter activity","type":"exact"},{"name":"neutral L-amino acid:dibasic L-amino acid antiporter activity","type":"exact"},{"name":"neutral L-amino acid:positively-charged polar L-amino acid antiporter activity","type":"exact"},{"name":"system b(0,+)-type activity","type":"related"}],"termid":"GO:0180009"}


id: PR:G2TRR5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP8B7.32 gene.","definition_xrefs":["UniProtKB:G2TRR5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P8B7.32 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.32","synonyms":[{"name":"Spom972h-SPBP8B7.32","type":"exact"}],"termid":"PR:G2TRR5"}


id: PATO:0001935
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being roundish, a little inclining to be oblong.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circular","termid":"PATO:0000411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obtuse","synonyms":[{"name":"roundish","type":"exact"}],"termid":"PATO:0001935"}


id: PBO:0084549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the REF (RNA and export factor binding proteins) family; when overexpressed, can substitute for the function of Yra1p in export of poly(A)+ mRNA from the nucleus","termid":"PBO:0084549"}


id: GO:0051434
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BH3 protein domain, present in Bcl-2 family members. The BH3 domain is a potent death domain and has an important role in protein-protein interactions and in cell death.","definition_xrefs":["PMID:12133724","PMID:9020082","Prosite:PS01259","PMID:11048732","PMID:9704409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BH domain binding","termid":"GO:0051400"},{"relation_name":"is_a","term_name":"death domain binding","termid":"GO:0070513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"BH3 domain binding","termid":"GO:0051434"}


id: PBO:0062752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily L member 1","termid":"PBO:0062752"}


id: PBO:0051133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 2/OR16-5 (non-functional)","termid":"PBO:0051133"}


id: PBO:0082290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arginine/alanine amino peptidase; overproduction stimulates glycogen accumulation; AAP1 has a paralog, APE2, that arose from the whole genome duplication","termid":"PBO:0082290"}


id: GO:0044433
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of cytoplasmic vesicle, a vesicle formed of membrane or protein, found in the cytoplasm of a cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic vesicle part (obsolete GO:0044433)","termid":"GO:0044433"}


id: PR:O14126
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S protease regulatory subunit 6A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01437","PANTHER:PTHR23073:SF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S protease regulatory subunit 6A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.12c","secondary_identifiers":["UniProtKB:O14126"],"synonyms":[{"name":"Spom972h-PSMC3","type":"exact"}],"termid":"PR:O14126"}


id: GO:0019021
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A viral genome composed of deoxyribonucleic acid.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA viral genome (obsolete GO:0019021)","termid":"GO:0019021"}


id: PR:Q9Y7V0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug117 gene.","definition_xrefs":["UniProtKB:Q9Y7V0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 117 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC645.11c","synonyms":[{"name":"Spom972h-mug117","type":"exact"}],"termid":"PR:Q9Y7V0"}


id: GO:0035684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a helper T cell from the blood vessels into the surrounding tissue. A helper T-cell is an effector T cell that provides help in the form of secreted cytokines to other immune cells.","definition_xrefs":["CL:0000912","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell extravasation","termid":"GO:0072683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"helper T cell extravasation","synonyms":[{"name":"T-helper cell extravasation","type":"exact"},{"name":"helper T-cell extravasation","type":"exact"}],"termid":"GO:0035684"}


id: GO:1903573
data:
  {"annotated_genes":["SJAG_02244"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904293"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a response to endoplasmic reticulum stress.","definition_xrefs":["GOC:bf","GOC:TermGenie","PMID:11381086","GOC:PARL","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to endoplasmic reticulum stress","termid":"GO:1905897"},{"relation_name":"negatively_regulates","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02244":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to endoplasmic reticulum stress","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of ER stress response","type":"exact"},{"name":"down regulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"down regulation of response to ER stress","type":"exact"},{"name":"down regulation of response to endoplasmic reticulum stress","type":"exact"},{"name":"down-regulation of ER stress response","type":"exact"},{"name":"down-regulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"down-regulation of response to ER stress","type":"exact"},{"name":"down-regulation of response to endoplasmic reticulum stress","type":"exact"},{"name":"downregulation of ER stress response","type":"exact"},{"name":"downregulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"downregulation of response to ER stress","type":"exact"},{"name":"downregulation of response to endoplasmic reticulum stress","type":"exact"},{"name":"inhibition of ER stress response","type":"narrow"},{"name":"inhibition of cellular response to endoplasmic reticulum stress","type":"narrow"},{"name":"inhibition of response to ER stress","type":"narrow"},{"name":"inhibition of response to endoplasmic reticulum stress","type":"narrow"},{"name":"negative regulation of ER stress response","type":"exact"},{"name":"negative regulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"negative regulation of response to ER stress","type":"exact"}],"termid":"GO:1903573","terms_by_termid":{"GO:1904293":null}}


id: GO:0001764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The characteristic movement of an immature neuron from germinal zones to specific positions where they will reside as they mature.","definition_xrefs":["CL:0000540","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"generation of neurons","termid":"GO:0048699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron migration","secondary_identifiers":["Wikipedia:Neural_development#Neuron_migration","Wikipedia:Neuron_migration"],"synonyms":[{"name":"neuron chemotaxis","type":"exact"},{"name":"neuron guidance","type":"related"},{"name":"neuronal migration","type":"exact"}],"termid":"GO:0001764"}


id: PBO:0061606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleobindin 2","termid":"PBO:0061606"}


id: GO:1903918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of actin filament severing.","definition_xrefs":["PMID:23325791","GOC:TermGenie","GO_REF:0000058","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament-based process","termid":"GO:0032970"},{"relation_name":"regulates","term_name":"actin filament severing","termid":"GO:0051014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of actin filament severing","synonyms":[{"name":"regulation of F-actin severing","type":"exact"},{"name":"regulation of actin filament severing activity","type":"related"},{"name":"regulation of barbed-end actin capping/severing activity","type":"related"}],"termid":"GO:1903918"}


id: PBO:0051187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3/OR15-7 (pseudogene)","termid":"PBO:0051187"}


id: PBO:0057079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR181A1 host gene","termid":"PBO:0057079"}


id: GO:0044472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with a resultant change in the activity of a calcium channel in the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:20920515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of ion channel activity in another organism","termid":"GO:0044560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of calcium channel activity in another organism","synonyms":[{"name":"envenomation resulting in modulation of calcium channel activity in other organism","type":"exact"}],"termid":"GO:0044472"}


id: PBO:0074939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 104","termid":"PBO:0074939"}


id: GO:2000313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fibroblast growth factor receptor signaling pathway","termid":"GO:0040036"},{"relation_name":"regulates","term_name":"fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","termid":"GO:0060825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of fibroblast growth factor receptor signaling pathway involved in neural plate anterior/posterior pattern formation","synonyms":[{"name":"regulation of fibroblast growth factor receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"}],"termid":"GO:2000313"}


id: PR:Q92358
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bqt1 gene.","definition_xrefs":["UniProtKB:Q92358","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere bouquet protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.13c","synonyms":[{"name":"Spom972h-bqt1","type":"exact"},{"name":"meiotic chromosome segregation protein bqt1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotic recombination protein rec26 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotically up-regulated gene 23 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92358"}


id: PBO:0080978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 12","termid":"PBO:0080978"}


id: GO:0008193
data:
  {"annotated_genes":["SJAG_04233"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113889],"is_not":false,"summary":null,"term":"GO:0008193"}]},"cv_name":"molecular_function","definition":"Catalysis of the posttranscriptional addition of a guanyl residue to the 5' end of a tRNA molecule; observed for His tRNAs.","definition_xrefs":["PMID:1660461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA guanylyltransferase activity","termid":"GO:0008192"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04233":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0140101","GO:0003674","GO:0140098","GO:0016779"],"is_obsolete":false,"name":"tRNA guanylyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.7.7.79","RHEA:54564"],"termid":"GO:0008193","terms_by_termid":{"GO:0008193":null}}


id: GO:1990636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A life cycle stage during which the reproductive capacity and fitness of an organism declines.","definition_xrefs":["PMID:27353257","PMID:24914937","PMID:25523082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological phase","termid":"GO:0044848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reproductive senescence","synonyms":[{"name":"ovarian senescence","type":"narrow"}],"termid":"GO:1990636"}


id: GO:0098906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a Purkinje myocyte. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell action potential","termid":"GO:0098901"},{"relation_name":"regulates","term_name":"Purkinje myocyte action potential","termid":"GO:0086017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Purkinje myocyte action potential","termid":"GO:0098906"}


id: PBO:0040847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biogenesis of lysosomal organelles complex 1 subunit 2","termid":"PBO:0040847"}


id: GO:0047744
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-amino-4-chloro-2-(2,3-dihydroxyphenyl)pyridazin-3(2H)-one + O2 = 5-amino-4-chloro-2-(2-hydroxymuconoyl)pyridazin-3(2H)-one + 2 H+.","definition_xrefs":["RHEA:20449","EC:1.13.11.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"chloridazon-catechol dioxygenase activity","secondary_identifiers":["MetaCyc:CHLORIDAZON-CATECHOL-DIOXYGENASE-RXN","KEGG_REACTION:R04602"],"synonyms":[{"name":"5-amino-4-chloro-2-(2,3-dihydroxyphenyl)-3(2H)-pyridazinone 1,2-oxidoreductase (decyclizing)","type":"related"}],"termid":"GO:0047744"}


id: GO:0050987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient sulfation of peptidyl-serine to form O-sulfo-L-serine.","definition_xrefs":["RESID:AA0361"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via O-sulfo-L-serine (obsolete GO:0050987)","termid":"GO:0050987"}


id: GO:1900187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell adhesion involved in single-species biofilm formation.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-substrate adhesion","termid":"GO:0010810"},{"relation_name":"regulates","term_name":"cell adhesion involved in single-species biofilm formation","termid":"GO:0043709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of cell adhesion involved in single-species biofilm formation","synonyms":[{"name":"regulation of cell adhesion during single-species biofilm formation","type":"related"}],"termid":"GO:1900187"}


id: _global:indirectly_positively_regulates
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p indirectly positively regulates q iff p is indirectly causally upstream of q and p positively regulates q.","direct_ancestors":[{"relation_name":"is_a","term_name":"indirectly_regulates","termid":"_global:indirectly_regulates"},{"relation_name":"is_a","term_name":"positively_regulates","termid":"_global:positively_regulates"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indirectly_positively_regulates","secondary_identifiers":["RO:0002407"],"termid":"_global:indirectly_positively_regulates"}


id: PATO:0001362
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's disposition to being easily damaged or destroyed.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragility","termid":"PATO:0001662"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile","termid":"PATO:0001362"}


id: GO:0035601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an acyl group, any group or radical of the form RCO- where R is an organic group, from a protein amino acid.","definition_xrefs":["PMID:12080046","GOC:se"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"},{"relation_name":"is_a","term_name":"macromolecule deacylation","termid":"GO:0098732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein deacylation","synonyms":[{"name":"protein amino acid deacylation","type":"exact"}],"termid":"GO:0035601"}


id: GO:0050668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving homocysteine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sulfur amino acid metabolic process","termid":"GO:0031337"},{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"regulation of homocysteine metabolic process","termid":"GO:0050666"},{"relation_name":"positively_regulates","term_name":"homocysteine metabolic process","termid":"GO:0050667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281","GO:0006790"],"is_obsolete":false,"name":"positive regulation of homocysteine metabolic process","synonyms":[{"name":"activation of homocysteine metabolic process","type":"narrow"},{"name":"positive regulation of Hcy metabolic process","type":"exact"},{"name":"positive regulation of Hcy metabolism","type":"exact"},{"name":"positive regulation of homocysteine metabolism","type":"exact"},{"name":"stimulation of homocysteine metabolic process","type":"narrow"},{"name":"up regulation of homocysteine metabolic process","type":"exact"},{"name":"up-regulation of homocysteine metabolic process","type":"exact"},{"name":"upregulation of homocysteine metabolic process","type":"exact"}],"termid":"GO:0050668"}


id: GO:0050897
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cobalt ion (Co2+).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0046872"}],"interesting_parent_ids":["GO:0005488","GO:0046872","GO:0003674"],"is_obsolete":false,"name":"cobalt ion binding","synonyms":[{"name":"Co ion binding","type":"exact"},{"name":"cobalt binding","type":"exact"}],"termid":"GO:0050897"}


id: PBO:0057139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 219a-2","termid":"PBO:0057139"}


id: PBO:0071445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 51","termid":"PBO:0071445"}


id: PBO:0034601
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_iron_ion_binding","termid":"PBO:0034601"}


id: PBO:0070767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L11 pseudogene 3","termid":"PBO:0070767"}


id: PBO:0060630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCK associated protein 5 like","termid":"PBO:0060630"}


id: GO:0102176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cycloeucalenone + NADPH + H+ = cycloeucalenol + NADP.","definition_xrefs":["GOC:pz","PMID:4387005"],"gene_count":0,"genotype_count":0,"name":"obsolete cycloeucalenone reductase activity (obsolete GO:0102176)","termid":"GO:0102176"}


id: GO:0007134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which follows anaphase I of meiosis and during which the chromosomes arrive at the poles of the cell and the division of the cytoplasm starts.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telophase","termid":"GO:0051326"},{"relation_name":"is_a","term_name":"meiosis I cell cycle phase","termid":"GO:0098764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meiotic telophase I","termid":"GO:0007134"}


id: PBO:0013017
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCm Binding protein","termid":"PBO:0013017"}


id: GO:0030593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte chemotaxis","termid":"GO:0071621"},{"relation_name":"is_a","term_name":"neutrophil migration","termid":"GO:1990266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil chemotaxis","termid":"GO:0030593"}


id: PBO:0030119
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_protein_level_during_cellular_response_to_hypoxia","termid":"PBO:0030119"}


id: PBO:0051225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-1-1 (pseudogene)","termid":"PBO:0051225"}


id: GO:0036303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of lymph vessels are generated and organized. The lymph vessel is the vasculature carrying lymph.","definition_xrefs":["GOC:BHF","GOC:gr","PMID:18093989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"lymph vessel development","termid":"GO:0001945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymph vessel morphogenesis","termid":"GO:0036303"}


id: PBO:0052713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 5","termid":"PBO:0052713"}


id: GO:0048286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the alveolus over time, from its formation to the mature structure. The alveolus is a sac for holding air in the lungs; formed by the terminal dilation of air passageways.","definition_xrefs":["GOC:mtg_lung","PMID:9751757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung alveolus development","synonyms":[{"name":"alveolarization","type":"exact"},{"name":"alveologenesis","type":"exact"}],"termid":"GO:0048286"}


id: GO:1902981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any synthesis of RNA primer involved in mitotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete synthesis of RNA primer involved in mitotic DNA replication (obsolete GO:1902981)","synonyms":[{"name":"synthesis of RNA primer involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902981"}


id: GO:0005751
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Contains the 13 polypeptide subunits of cytochrome c oxidase, including cytochrome a and cytochrome a3. Catalyzes the oxidation of reduced cytochrome c by dioxygen (O2).","definition_xrefs":["ISBN:0198547684","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial respiratory chain complex IV (obsolete GO:0005751)","termid":"GO:0005751"}


id: GO:1901781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving p-cumate.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:8631713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"p-cumate metabolic process","synonyms":[{"name":"p-cumate metabolism","type":"exact"}],"termid":"GO:1901781"}


id: PBO:0036100
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_biotinylation_during_vegetative_growth","termid":"PBO:0036100"}


id: PBO:0079273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 39D, pseudogene","termid":"PBO:0079273"}


id: GO:1903630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aminoacyl-tRNA ligase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:2280766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ligase activity","termid":"GO:0051340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aminoacyl-tRNA ligase activity","synonyms":[{"name":"regulation of aminoacyl-tRNA synthetase activity","type":"exact"},{"name":"regulation of aminoacyl-tRNA synthetase auxiliary protein activity","type":"related"}],"termid":"GO:1903630"}


id: GO:0048793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pronephros over time, from its formation to the mature structure. In mammals, the pronephros is the first of the three embryonic kidneys to be established and exists only transiently. In lower vertebrates such as fish and amphibia, the pronephros is the fully functional embryonic kidney and is indispensable for larval life.","definition_xrefs":["PMID:15968585","ZFA:0000151","GOC:mtg_kidney_jan10","PMID:18322540","XAO:00002000","GOC:bf","PMID:10535314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephros development","synonyms":[{"name":"pronephric kidney development","type":"exact"}],"termid":"GO:0048793"}


id: GO:0022875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + galactitol(out) = protein histidine + galactitol phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"galactitol transmembrane transporter activity","termid":"GO:0015577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-galactitol phosphotransferase system transmembrane transporter activity","synonyms":[{"name":"galactitol PTS transporter activity","type":"exact"}],"termid":"GO:0022875"}


id: PBO:0091357
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catabolism of ARginine, after S. cerevisiae","termid":"PBO:0091357"}


id: PBO:0002516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-isopropylmalate dehydratase Leu2 (predicted)","termid":"PBO:0002516"}


id: PBO:0066263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX pseudogene 3","termid":"PBO:0066263"}


id: GO:0070473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of uterine smooth muscle contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle contraction","termid":"GO:0045986"},{"relation_name":"is_a","term_name":"regulation of uterine smooth muscle contraction","termid":"GO:0070472"},{"relation_name":"negatively_regulates","term_name":"uterine smooth muscle contraction","termid":"GO:0070471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of uterine smooth muscle contraction","synonyms":[{"name":"down regulation of uterine smooth muscle contraction","type":"exact"},{"name":"down-regulation of uterine smooth muscle contraction","type":"exact"},{"name":"downregulation of uterine smooth muscle contraction","type":"exact"},{"name":"inhibition of uterine smooth muscle contraction","type":"narrow"},{"name":"negative regulation of myometrial contraction","type":"exact"},{"name":"negative regulation of myometrial smooth muscle contraction","type":"exact"},{"name":"negative regulation of myometrium contraction","type":"exact"},{"name":"uterine smooth muscle relaxation","type":"related"}],"termid":"GO:0070473"}


id: PBO:0066108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RASGRF2 antisense RNA 1","termid":"PBO:0066108"}


id: PBO:0041056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRD7 pseudogene 7","termid":"PBO:0041056"}


id: PBO:0052985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L antigen family member 3 pseudogene 1","termid":"PBO:0052985"}


id: PBO:0058187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4480","termid":"PBO:0058187"}


id: PBO:0091607
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Important For Sex","termid":"PBO:0091607"}


id: PBO:0064662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A like 4E","termid":"PBO:0064662"}


id: PBO:0086112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for bud growth; involved in transport of cell wall components from the Golgi to the cell surface; SBE2 has a paralog, SBE22, that arose from the whole genome duplication","termid":"PBO:0086112"}


id: PBO:0036507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate kinase Kcs1 (predicted)","termid":"PBO:0036507"}


id: GO:0050459
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + phosphoethanolamine = acetaldehyde + NH4 + phosphate.","definition_xrefs":["EC:4.2.3.2","RHEA:17889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"ethanolamine-phosphate phospho-lyase activity","secondary_identifiers":["Reactome:R-HSA-5696415","KEGG_REACTION:R00748","MetaCyc:ETHANOLAMINE-PHOSPHATE-PHOSPHO-LYASE-RXN"],"synonyms":[{"name":"O-phosphoethanolamine-phospholyase activity","type":"related"},{"name":"O-phosphorylethanol-amine phospho-lyase activity","type":"related"},{"name":"amino alcohol O-phosphate phospholyase activity","type":"broad"},{"name":"ethanolamine-phosphate phospho-lyase (deaminating)","type":"related"},{"name":"ethanolamine-phosphate phospho-lyase (deaminating; acetaldehyde-forming)","type":"related"}],"termid":"GO:0050459"}


id: FYPO:0001597
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which valine import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal amino acid import","termid":"FYPO:0001596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal valine import","synonyms":[{"name":"normal L-valine import","type":"exact"},{"name":"normal L-valine import across plasma membrane","type":"exact"},{"name":"normal valine import during mitotic cell cycle","type":"related"},{"name":"normal valine import during vegetative growth","type":"exact"},{"name":"normal valine import into cell","type":"exact"},{"name":"normal valine uptake","type":"exact"}],"termid":"FYPO:0001597"}


id: PBO:0004278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-PARP type zinc finger protein","termid":"PBO:0004278"}


id: PBO:0062967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 10","termid":"PBO:0062967"}


id: PBO:0080650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDTC1 divergent transcript","termid":"PBO:0080650"}


id: MOD:00670
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with an acyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-acylated residue","synonyms":[{"name":"NAcylRes","type":"exact"}],"termid":"MOD:00670"}


id: GO:0001816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a cytokine due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression","termid":"GO:0010467"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"cytokine production","secondary_identifiers":["GO:0050663","GO:0042032","GO:0042089","GO:0042107"],"synonyms":[{"name":"cytokine biosynthetic process","type":"narrow"},{"name":"cytokine metabolic process","type":"narrow"},{"name":"cytokine secretion","type":"narrow"},{"name":"interferon production","type":"narrow"},{"name":"interferon secretion","type":"narrow"},{"name":"interleukin production","type":"narrow"},{"name":"interleukin secretion","type":"narrow"}],"termid":"GO:0001816"}


id: PBO:0053482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 457","termid":"PBO:0053482"}


id: PBO:0049250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastrin releasing peptide receptor","termid":"PBO:0049250"}


id: GO:0019883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses antigen (peptide or lipid) of endogenous origin on its cell surface in association with an MHC protein complex.","definition_xrefs":["PMID:15928678","GOC:add","ISBN:0781735149","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous antigen","synonyms":[{"name":"antigen presentation, endogenous antigen","type":"exact"}],"termid":"GO:0019883"}


id: PBO:0002685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT I complex subunit Vps23","termid":"PBO:0002685"}


id: PBO:0054718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2127","termid":"PBO:0054718"}


id: GO:0102523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2-chloropropanoate + NADP = 2-chloroacrylate + NADPH + H+.","definition_xrefs":["EC:1.3.1.103","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-chloroacrylate reductase activity","secondary_identifiers":["MetaCyc:RXN-14536","RHEA:36591"],"termid":"GO:0102523"}


id: GO:0000248
data:
  {"annotated_genes":["SJAG_00717","SJAG_03509"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85736,103600],"is_not":false,"summary":null,"term":"GO:0000248"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,7,24(28)-ergostatrienol + O2 + NADPH = 5,7,22,24(28)-ergostatetraenol + 2 H2O + NADP+.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"},{"relation_name":"is_a","term_name":"sterol desaturase activity","termid":"GO:0070704"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00717":null,"SJAG_03509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"C-5 sterol desaturase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-195664","Reactome:R-HSA-6807053"],"synonyms":[{"name":"sterol-C5-desaturase activity","type":"exact"}],"termid":"GO:0000248","terms_by_termid":{"GO:0000248":null}}


id: PBO:0027167
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_premeiotic_DNA_replication_initiation","termid":"PBO:0027167"}


id: FYPO:0002099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to hydroxyurea","synonyms":[{"name":"normal protein phosphorylation during cellular response to HU","type":"exact"},{"name":"normal protein phosphorylation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0002099"}


id: MOD:00368
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to N-carboxy-L-methionine.","definition_xrefs":["PubMed:11120890","RESID:AA0363","PubMed:10368287","PubMed:12595263","Unimod:299#M","PubMed:8312270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"},{"relation_name":"is_a","term_name":"carboxylated residue","termid":"MOD:01152"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-carboxy-L-methionine","synonyms":[{"name":"(S)-2-carboxyamino-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-carbamic-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-carbamic-4-(methylthio)butanoic acid","type":"exact"},{"name":"Carboxy","type":"related"},{"name":"Carboxylation","type":"related"},{"name":"N-carboxy-L-methionine","type":"exact"},{"name":"N-carboxymethionine","type":"exact"}],"termid":"MOD:00368"}


id: PBO:0083660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum (ER) localized integral membrane protein; may promote secretion of certain hexose transporters, including Gal2p; involved in glucose-dependent repression","termid":"PBO:0083660"}


id: PBO:0000707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA U3","termid":"PBO:0000707"}


id: PBO:0045895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 gamma pseudogene 7","termid":"PBO:0045895"}


id: FYPO:0003410
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin containing the histone H3 variant CenH3 (also called CENP-A; Cnp1 in S. pombe) are assembled over a larger portion of the centromeric region of the chromosome than normal. CENP-A-containing nucleosomes are normally assembled into chromatin at the centromeres, encompassing the central core and centromeric inner repeat regions.","definition_xrefs":["GO:0034080","PMID:24710126","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal CENP-A containing chromatin assembly","termid":"FYPO:0003409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased spatial extent of CENP-A containing chromatin assembly","synonyms":[{"name":"CENP-A containing nucleosome spreading","type":"related"},{"name":"increased extent of CENP-A containing nucleosome","type":"related"},{"name":"increased spatial extent of CENP-A containing nucleosome assembly","type":"related"},{"name":"increased spatial extent of CENP-A containing nucleosome assembly at centromere","type":"exact"},{"name":"increased spatial extent of CENP-A containing nucleosome assembly during mitotic cell cycle","type":"related"},{"name":"increased spatial extent of CENP-A containing nucleosome assembly during vegetative growth","type":"exact"},{"name":"increased spatial extent of CENP-A deposition","type":"related"},{"name":"increased spatial extent of CENP-A loading","type":"related"},{"name":"increased spatial extent of CenH3-containing nucleosome assembly at centromere","type":"related"},{"name":"increased spatial extent of DNA replication-independent nucleosome assembly at centromere","type":"exact"},{"name":"increased spatial extent of centromere-specific histone exchange","type":"exact"},{"name":"increased spatial extent of centromere-specific nucleosome assembly","type":"exact"},{"name":"increased spatial extent of centromeric DNA replication-independent nucleosome assembly","type":"exact"}],"termid":"FYPO:0003410"}


id: FYECO:0000093
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which lithium ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Li ions","synonyms":[{"name":"lithium ions added","type":"exact"}],"termid":"FYECO:0000093"}


id: PBO:0048646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein beta 6","termid":"PBO:0048646"}


id: PATO:0002230
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A triangular shape quality inhering in a bearer by virtue of the bearer's being nearly, but not perfectly, triangular.","direct_ancestors":[{"relation_name":"is_a","term_name":"triangular","termid":"PATO:0001875"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subtriangular","termid":"PATO:0002230"}


id: PBO:0048519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphodiester phosphodiesterase domain containing 2","termid":"PBO:0048519"}


id: GO:0035886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a vascular smooth muscle cell.","definition_xrefs":["GOC:sl","PMID:16151017","PMID:18267954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell differentiation","termid":"GO:0051145"},{"relation_name":"part_of","term_name":"vasculature development","termid":"GO:0001944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell differentiation","synonyms":[{"name":"VSMC differentiation","type":"exact"},{"name":"vascular smooth muscle cell differentiation","type":"exact"}],"termid":"GO:0035886"}


id: PBO:0085388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane H+-pantothenate symporter; confers sensitivity to the antifungal agent fenpropimorph; relocalizes from vacuole to cytoplasm upon DNA replication stress","termid":"PBO:0085388"}


id: GO:0046023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cell cycle process that modulates the frequency, rate or extent of transcription from an RNA polymerase III promoter that occurs during the mitotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase III promoter during mitotic cell cycle (obsolete GO:0046023)","synonyms":[{"name":"mitotic regulation of transcription from Pol III promoter","type":"exact"},{"name":"regulation of transcription from Pol III promoter, mitotic","type":"exact"},{"name":"regulation of transcription from RNA polymerase III promoter during mitosis","type":"exact"}],"termid":"GO:0046023"}


id: GO:2000308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tumor necrosis factor (ligand) superfamily member 11 production.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903556"},{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor (ligand) superfamily member 11 production","termid":"GO:2000307"},{"relation_name":"negatively_regulates","term_name":"tumor necrosis factor (ligand) superfamily member 11 production","termid":"GO:0072535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tumor necrosis factor (ligand) superfamily member 11 production","synonyms":[{"name":"negative regulation of RANKL production","type":"exact"},{"name":"negative regulation of TNFSF11 production","type":"exact"}],"termid":"GO:2000308"}


id: GO:0034698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gonadotropin stimulus.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hormone","termid":"GO:0009725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to gonadotropin","synonyms":[{"name":"response to gonadotropin stimulus","type":"exact"}],"termid":"GO:0034698"}


id: PBO:0066325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RC3H1 intronic transcript 1","termid":"PBO:0066325"}


id: PR:Q9UTR5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rgf2 gene.","definition_xrefs":["UniProtKB:Q9UTR5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho1 guanine nucleotide exchange factor 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.06","synonyms":[{"name":"Spom972h-rgf2","type":"exact"}],"termid":"PR:Q9UTR5"}


id: GO:0072181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a mesonephric duct. A mesonephric duct is a tube that drains the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule formation","termid":"GO:0072172"},{"relation_name":"is_a","term_name":"nephric duct formation","termid":"GO:0072179"},{"relation_name":"is_a","term_name":"mesonephric duct morphogenesis","termid":"GO:0072180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric duct formation","synonyms":[{"name":"Wolffian duct formation","type":"exact"}],"termid":"GO:0072181"}


id: PATO:0000036
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000036 water content (obsolete PATO:0000036)","termid":"PATO:0000036"}


id: PR:O94451
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pli1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 SUMO-protein ligase pli1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.05","synonyms":[{"name":"Spom972h-pli1","type":"exact"}],"termid":"PR:O94451"}


id: GO:0060413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which atrial septum is generated and organized. The atrial septum separates the upper chambers (the atria) of the heart from one another.","definition_xrefs":["GOC:dph","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac septum morphogenesis","termid":"GO:0060411"},{"relation_name":"part_of","term_name":"cardiac atrium morphogenesis","termid":"GO:0003209"},{"relation_name":"part_of","term_name":"atrial septum development","termid":"GO:0003283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial septum morphogenesis","secondary_identifiers":["GO:0003287"],"synonyms":[{"name":"interatrial septum morphogenesis","type":"exact"}],"termid":"GO:0060413"}


id: GO:0004504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl-glycine + ascorbate + O2 = peptidyl(2-hydroxyglycine) + dehydroascorbate + H2O.","definition_xrefs":["EC:1.14.17.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen","termid":"GO:0016715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"peptidylglycine monooxygenase activity","secondary_identifiers":["RHEA:21452","MetaCyc:PEPTIDYLGLYCINE-MONOOXYGENASE-RXN"],"synonyms":[{"name":"PAM activity","type":"related"},{"name":"PAM-A","type":"related"},{"name":"PAM-B","type":"related"},{"name":"peptide alpha-amidating enzyme","type":"related"},{"name":"peptide alpha-amide synthase activity","type":"related"},{"name":"peptide-alpha-amide synthetase activity","type":"related"},{"name":"peptidyl alpha-amidating enzyme activity","type":"related"},{"name":"peptidylglycine 2-hydroxylase activity","type":"exact"},{"name":"peptidylglycine alpha-amidating monooxygenase activity","type":"related"},{"name":"peptidylglycine alpha-hydroxylase activity","type":"related"},{"name":"peptidylglycine,ascorbate:oxygen oxidoreductase (2-hydroxylating)","type":"related"},{"name":"synthase, peptide alpha-amide","type":"related"}],"termid":"GO:0004504"}


id: PATO:0000438
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in a bearer by virtue of the bearer's lacking or not exhibiting variation.","definition_xrefs":["Dictionary:http://dictionary.reference.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability","termid":"PATO:0001303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invariant","synonyms":[{"name":"constant","type":"related"},{"name":"uniform","type":"exact"}],"termid":"PATO:0000438"}


id: PBO:0110428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP10 pseudogene 3","termid":"PBO:0110428"}


id: PBO:0052248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 17","termid":"PBO:0052248"}


id: PBO:0041272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q like 4","termid":"PBO:0041272"}


id: FYPO:0007454
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ATP binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ATP binding","termid":"FYPO:0003671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased ATP binding","synonyms":[{"name":"reduced ATP binding","type":"exact"}],"termid":"FYPO:0007454"}


id: PBQ:0000003
data:
  {"annotation_feature_type":"gene","cv_name":"pb_quiescence","definition":"Cell quiescence, i.e. a specialized resting state in which the cells do not grow or divide, and the gene expression pattern changes globally, that a cell enters following cell cycle arrest in G1 due to nitrogen limitation. In some cell types or under certain conditions, cellular metabolism may proceed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell quiescence following G1 arrest","termid":"PBQ:0000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell quiescence following G1 arrest due to nitrogen limitation","synonyms":[{"name":"cellular quiescence following G1 arrest due to nitrogen limitation","type":"exact"},{"name":"quiescence following G1 arrest due to nitrogen limitation","type":"broad"}],"termid":"PBQ:0000003"}


id: PBO:0035917
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_dNTP_level","termid":"PBO:0035917"}


id: GO:0070149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling glutamate to glutamyl-tRNA in a mitochondrion, catalyzed by glutamyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamyl-tRNA aminoacylation","termid":"GO:0006424"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140053","GO:0008150","GO:0006520","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA aminoacylation","termid":"GO:0070149"}


id: PR:O14182
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 30S ribosomal protein S12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S12, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.06","secondary_identifiers":["UniProtKB:O14182"],"synonyms":[{"name":"Spom972h-rpsL","type":"exact"}],"termid":"PR:O14182"}


id: GO:0045292
data:
  {"annotated_genes":["SJAG_00597","SJAG_00571","SJAG_05025","SJAG_01810","SJAG_03687","SJAG_00498","SJAG_04863","SJAG_00539","SJAG_00094","SJAG_00147","SJAG_04071","SJAG_00076","SJAG_00504","SJAG_03430","SJAG_02469","SJAG_01511","SJAG_05926","SJAG_01301","SJAG_00998","SJAG_04529","SJAG_03937","SJAG_04433","SJAG_00083","SJAG_03301","SJAG_01629","SJAG_04214","SJAG_04497","SJAG_01214","SJAG_01452","SJAG_03279","SJAG_05009","SJAG_02687","SJAG_04783","SJAG_03369","SJAG_01064","SJAG_03427","SJAG_00446","SJAG_02879","SJAG_02772","SJAG_02005","SJAG_04898","SJAG_03469","SJAG_02185","SJAG_01015","SJAG_03498","SJAG_01870","SJAG_03890","SJAG_01308","SJAG_03210","SJAG_00414","SJAG_03894","SJAG_03245","SJAG_00888","SJAG_03460","SJAG_01819","SJAG_01440","SJAG_05212","SJAG_04405","SJAG_03995","SJAG_01557","SJAG_02558","SJAG_04782","SJAG_04222","SJAG_02686","SJAG_05240","SJAG_00818","SJAG_02083","SJAG_02455","SJAG_01958","SJAG_05349","SJAG_00639","SJAG_05235","SJAG_03410","SJAG_04293","SJAG_04589","SJAG_03966","SJAG_01547","SJAG_04318","SJAG_05211","SJAG_02688","SJAG_03954","SJAG_03711","SJAG_00249","SJAG_02862","SJAG_02279","SJAG_05224","SJAG_00322","SJAG_00643","SJAG_03214","SJAG_04163","SJAG_01654","SJAG_04025","SJAG_02396","SJAG_02304","SJAG_01327","SJAG_01634","SJAG_02227","SJAG_03238","SJAG_01852","SJAG_00989","SJAG_16453","SJAG_04117","SJAG_01504","SJAG_03112","SJAG_02844","SJAG_02843","SJAG_02905","SJAG_02078","SJAG_00225","SJAG_01152","SJAG_01200","SJAG_01040","SJAG_02317","SJAG_04914","SJAG_04949","SJAG_01433","SJAG_04694","SJAG_05208","SJAG_00577","SJAG_04911","SJAG_03983","SJAG_03993","SJAG_00363","SJAG_02018","SJAG_03291","SJAG_04079","SJAG_00859","SJAG_01144","SJAG_03601","SJAG_01408","SJAG_03070","SJAG_04230","SJAG_00911","SJAG_02295","SJAG_00809","SJAG_03849","SJAG_00531","SJAG_01008","SJAG_00058","SJAG_02722","SJAG_03547","SJAG_00313"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83507,83858,84597,85065,85548,85611,86030,86302,86676,87482,87858,88161,88358,88422,88722,88743,88748,88951,89013,89109,89172,89380,89437,89652,90238,90797,90996,91069,91255,91408,91448,91465,91620,91679,91872,91900,92025,92051,92240,92284,92408,92518,92914,93477,93745,94085,94515,94856,95110,96700,96761,97320,97812,98264,98491,98553,98625,98722,98782,99066,99096,99101,99238,99268,99283,100589,100742,100919,101015,101555,101581,101694,101707,101895,101939,102408,102468,102500,102608,102827,103238,103717,103956,104310,104607,104746,104835,104937,105297,105298,105570,105615,105818,105854,106125,106137,106586,106706,107361,107609,107786,107822,107863,108527,108734,108967,109184,109252,109542,109930,109939,110436,110442,110940,111017,111065,111292,111331,111953,112047,112499,112972,113118,113310,114056,114499,114642,114810,114983,58879,78228,88209,91260],"is_not":false,"summary":null,"term":"GO:0045292"},{"annotations":[113915],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000354"},{"annotations":[98624,90072,106136,108446,109362,91254,87623,101938,106720,106705,106731,91678,93905,90995,98786,111330],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000395"},{"annotations":[114500],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905746"},{"annotations":[94639],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905744"}]},"cv_name":"biological_process","definition":"The joining together, after removal of an intervening sequence composed of one or more introns, of two segments of the same RNA molecule via spliceosomal catalysis to produce an mRNA composed only of exon sequences that all came from the same primary transcript.","definition_xrefs":["ISBN:0879695897","GOC:krc","PMID:18458335"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA splicing, via 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id: PBO:0065641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 20","termid":"PBO:0065641"}


id: GO:1902115
data:
  {"annotated_genes":["SJAG_04464","SJAG_00718","SJAG_04638","SJAG_03048","SJAG_05289","SJAG_01837","SJAG_03851","SJAG_02332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905560"},{"annotations":[104633,104724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000786"},{"annotations":[85725,98452,112768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905561"},{"annotations":[107513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[107090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901673"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of organelle assembly.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"regulates","term_name":"organelle assembly","termid":"GO:0070925"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00718":null,"SJAG_01837":null,"SJAG_02332":null,"SJAG_03048":null,"SJAG_03851":null,"SJAG_04464":null,"SJAG_04638":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of organelle assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902115","terms_by_termid":{"GO:0110161":null,"GO:1901673":null,"GO:1905560":null,"GO:1905561":null,"GO:2000786":null}}


id: GO:0045756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the activation, by acetate, of the chemical reactions and pathways resulting in the breakdown of acetate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of initiation of acetate catabolic process by acetate","termid":"GO:0045147"},{"relation_name":"is_a","term_name":"positive regulation of acetate catabolic process","termid":"GO:0045754"},{"relation_name":"is_a","term_name":"positive regulation of response to acetate","termid":"GO:1901459"},{"relation_name":"positively_regulates","term_name":"initiation of acetate catabolic process by acetate","termid":"GO:0045146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"positive regulation of initiation of acetate catabolic process by acetate","synonyms":[{"name":"activation of initiation of acetate catabolic process by acetate","type":"narrow"},{"name":"positive regulation of initiation of acetate breakdown by acetate","type":"exact"},{"name":"positive regulation of initiation of acetate degradation by acetate","type":"exact"},{"name":"stimulation of initiation of acetate catabolic process by acetate","type":"narrow"},{"name":"up regulation of initiation of acetate catabolic process by acetate","type":"exact"},{"name":"up-regulation of initiation of acetate catabolic process by acetate","type":"exact"},{"name":"upregulation of initiation of acetate catabolic process by acetate","type":"exact"}],"termid":"GO:0045756"}


id: GO:0010233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances, into, out of or within the phloem during long distance transport between source and sink tissues.","definition_xrefs":["PMID:19025382","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular transport","termid":"GO:0010232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"phloem transport","termid":"GO:0010233"}


id: PBO:0030077
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histidine_import","termid":"PBO:0030077"}


id: PBO:0003277
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.5.1.5","termid":"PBO:0003277"}


id: PBO:0056526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanocortin 3 receptor","termid":"PBO:0056526"}


id: GO:0048351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of paraxial mesoderm cell fate specification.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mesodermal cell fate specification","termid":"GO:0042662"},{"relation_name":"is_a","term_name":"regulation of paraxial mesodermal cell fate specification","termid":"GO:0048349"},{"relation_name":"negatively_regulates","term_name":"paraxial mesodermal cell fate specification","termid":"GO:0048348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of paraxial mesodermal cell fate specification","synonyms":[{"name":"down regulation of paraxial mesodermal cell fate specification","type":"exact"},{"name":"down-regulation of paraxial mesodermal cell fate specification","type":"exact"},{"name":"downregulation of paraxial mesodermal cell fate specification","type":"exact"},{"name":"inhibition of paraxial mesodermal cell fate specification","type":"narrow"}],"termid":"GO:0048351"}


id: PBO:0065258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 23B","termid":"PBO:0065258"}


id: GO:0039587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a virus stops, prevents, or reduces the activity of host tetherin activity. Tetherin (also known as BST2) is an alpha interferon-inducible cellular factor that impairs the release of many enveloped viruses. By blocking tetherin activity, many viruses circumvent its antiviral effects.","definition_xrefs":["PMID:22493439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virus-mediated perturbation of host defense response","termid":"GO:0019049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"suppression by virus of host tetherin activity","synonyms":[{"name":"inhibition of host BST2/Tetherin by virus","type":"exact"}],"termid":"GO:0039587"}


id: PR:Q9USS9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dni2 gene.","definition_xrefs":["UniProtKB:Q9USS9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delayed minus-nitrogen induction protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4.01","synonyms":[{"name":"Spom972h-dni2","type":"exact"}],"termid":"PR:Q9USS9"}


id: GO:0010561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the chemical reactions and pathways resulting in the formation of a glycoprotein, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"regulation of glycoprotein biosynthetic process","termid":"GO:0010559"},{"relation_name":"is_a","term_name":"negative regulation of glycoprotein metabolic process","termid":"GO:1903019"},{"relation_name":"negatively_regulates","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glycoprotein biosynthetic process","termid":"GO:0010561"}


id: GO:0050656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 3'-phosphoadenosine 5'-phosphosulfate (PAPS), a naturally occurring mixed anhydride. It is an intermediate in the formation of a variety of sulfo compounds in biological systems.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl ribonucleotide binding","termid":"GO:0032559"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"3'-phosphoadenosine 5'-phosphosulfate binding","synonyms":[{"name":"3'-phosphoadenosine 5'-phosphosulphate binding","type":"exact"},{"name":"3'-phosphoadenylyl-sulfate binding","type":"exact"},{"name":"PAPS binding","type":"exact"},{"name":"adenosine 3'-phosphate 5'-phosphosulfate binding","type":"exact"},{"name":"phosphoadenosine phosphosulfate binding","type":"exact"}],"termid":"GO:0050656"}


id: GO:1905454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of myeloid progenitor cell differentiation.","definition_xrefs":["GO_REF:0000058","PMID:27010503","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901533"},{"relation_name":"is_a","term_name":"regulation of myeloid progenitor cell differentiation","termid":"GO:1905453"},{"relation_name":"negatively_regulates","term_name":"myeloid progenitor cell differentiation","termid":"GO:0002318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myeloid progenitor cell differentiation","synonyms":[{"name":"down regulation of myeloid progenitor cell differentiation","type":"exact"},{"name":"down-regulation of myeloid progenitor cell differentiation","type":"exact"},{"name":"downregulation of myeloid progenitor cell differentiation","type":"exact"},{"name":"inhibition of myeloid progenitor cell differentiation","type":"narrow"}],"termid":"GO:1905454"}


