# terms

id: SO:0002184
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a sense intronic long non-coding RNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA_gene","termid":"SO:0002127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sense_intronic_lncRNA_gene","synonyms":[{"name":"sense intronic lncRNA gene","type":"exact"},{"name":"sense intronic ncRNA gene","type":"exact"},{"name":"sense_intronic_lncRNA_gene","type":"exact"}],"termid":"SO:0002184"}


id: PBO:0082472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calnexin; integral membrane ER chaperone involved in folding and quality control of glycoproteins; chaperone activity is inhibited by Mpd1p, with which Cne1p interacts; 24% identical to mammalian calnexin; Ca+ binding not yet shown in yeast","termid":"PBO:0082472"}


id: PBO:0059945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 31","termid":"PBO:0059945"}


id: PBO:0031151
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_papulacandin_B","termid":"PBO:0031151"}


id: PBO:0005263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dephospho-CoA kinase (predicted)","termid":"PBO:0005263"}


id: PBO:0056861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIB E3 ubiquitin protein ligase 1","termid":"PBO:0056861"}


id: PBO:0073620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 6","termid":"PBO:0073620"}


id: GO:0051407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glycerone phosphate(out) + phosphate(in) = glycerone phosphate(in) + phosphate(out).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"organophosphate:phosphate antiporter activity","termid":"GO:0015315"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"glycerone phosphate:phosphate antiporter activity","synonyms":[{"name":"dihydroxyacetone-phosphate:inorganic phosphate antiporter activity","type":"exact"},{"name":"glycerone phosphate:inorganic phosphate antiporter activity","type":"exact"}],"termid":"GO:0051407"}


id: PBO:0054599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2003","termid":"PBO:0054599"}


id: PBO:0091687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element (with segmental deletion) Wtf2","termid":"PBO:0091687"}


id: PBO:0017094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"holo TFIIH complex subunit Tfb6","termid":"PBO:0017094"}


id: GO:0031699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a beta-3 adrenergic receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor binding","termid":"GO:0031690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"beta-3 adrenergic receptor binding","synonyms":[{"name":"beta-3 adrenergic receptor ligand","type":"narrow"}],"termid":"GO:0031699"}


id: GO:0043569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of insulin-like growth factor receptor signaling.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of insulin-like growth factor receptor signaling pathway","termid":"GO:0043567"},{"relation_name":"negatively_regulates","term_name":"insulin-like growth factor receptor signaling pathway","termid":"GO:0048009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of insulin-like growth factor receptor signaling pathway","synonyms":[{"name":"down regulation of insulin-like growth factor receptor signaling pathway","type":"exact"},{"name":"down-regulation of insulin-like growth factor receptor signaling pathway","type":"exact"},{"name":"downregulation of insulin-like growth factor receptor signaling pathway","type":"exact"},{"name":"inhibition of insulin-like growth factor receptor signaling pathway","type":"narrow"},{"name":"negative regulation of IGF receptor signaling pathway","type":"exact"},{"name":"negative regulation of IGF receptor signalling pathway","type":"exact"},{"name":"negative regulation of insulin-like growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0043569"}


id: PR:O13339-2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A telomerase reverse transcriptase (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:O13339-2.","definition_xrefs":["PRO:DNx","UniProtKB:O13339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomerase reverse transcriptase (Schizosaccharomyces pombe 972h-)","termid":"PR:O13339"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase reverse transcriptase isoform 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:O13339-2"],"synonyms":[{"name":"Spom972h-TERT/iso:2","type":"exact"}],"termid":"PR:O13339-2"}


id: GO:0005330
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dopamine(out) + Na+(out) + Cl-(out)= dopamine(in) + Na+(in) + Cl-(in).","definition_xrefs":["PMID:21752877","TC:2.A.22.1.3","PMID:22519513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoamine transmembrane transporter activity","termid":"GO:0008504"},{"relation_name":"is_a","term_name":"sodium:chloride symporter activity","termid":"GO:0015378"},{"relation_name":"is_a","term_name":"organic hydroxy compound transmembrane transporter activity","termid":"GO:1901618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"dopamine:sodium symporter activity","secondary_identifiers":["GO:0005329"],"synonyms":[{"name":"dopamine transmembrane transporter activity","type":"exact"},{"name":"dopamine:sodium:chloride symporter activity","type":"exact"},{"name":"sodium/dopamine symporter activity","type":"exact"}],"termid":"GO:0005330"}


id: FYPO:0004880
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more lipid metabolism RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Lipid metabolism RNAs are transcribed from genes whose products are involved in any lipid metabolic process.","definition_xrefs":["PMID:26366556","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased level of lipid metabolism gene mRNA during vegetative growth","synonyms":[{"name":"decreased level of lipid metabolism gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of lipid metabolism gene mRNA during mitotic cell cycle","type":"related"},{"name":"decreased level of lipid metabolism gene transcripts during vegetative growth","type":"exact"},{"name":"decreased lipid metabolism gene mRNA accumulation during vegetative growth","type":"related"},{"name":"reduced level of lipid metabolism gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0004880"}


id: GO:0004402
data:
  {"annotated_genes":["SJAG_01204","SJAG_03546","SJAG_02990","SJAG_03537","SJAG_02165","SJAG_00676","SJAG_02773"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108727],"is_not":false,"summary":null,"term":"GO:0004402"},{"annotations":[114638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043998"},{"annotations":[87474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010484"},{"annotations":[87475,86828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036408"},{"annotations":[87476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043993"},{"annotations":[95033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044016"},{"annotations":[105392,105393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032931"},{"annotations":[87477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043992"},{"annotations":[114639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010485"},{"annotations":[84508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043997"},{"annotations":[95034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046972"},{"annotations":[84509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043995"},{"annotations":[84510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043996"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone = CoA + acetyl-histone.","definition_xrefs":["EC:2.3.1.48","PMID:19056256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide-lysine-N-acetyltransferase activity","termid":"GO:0061733"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00676":null,"SJAG_01204":null,"SJAG_02165":null,"SJAG_02773":null,"SJAG_02990":null,"SJAG_03537":null,"SJAG_03546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0034212","GO:0016740","GO:0003674","GO:0016746","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"histone acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0004403","GO:0004405","GO:0004406","GO:0043166","Reactome:R-HSA-3301237","Reactome:R-HSA-3318413","Reactome:R-HSA-3321805","Reactome:R-HSA-3321975","Reactome:R-HSA-5250938","RHEA:21992","GO:0046971","MetaCyc:HISTONE-ACETYLTRANSFERASE-RXN","Reactome:R-HSA-3301345","Reactome:R-HSA-3318415","Reactome:R-HSA-3318486","Reactome:R-HSA-3451147","Reactome:R-HSA-3662318","GO:0004404","Reactome:R-HSA-5144542","Reactome:R-HSA-3321883","Reactome:R-HSA-3697008","Reactome:R-HSA-3662335","Reactome:R-HSA-3697920"],"synonyms":[{"name":"H2A/H2B histone acetyltransferase activity","type":"narrow"},{"name":"H3/H4 histone acetyltransferase activity","type":"narrow"},{"name":"H4/H2 histone acetyltransferase activity","type":"narrow"},{"name":"H4/H2A acetyltransferase activity","type":"narrow"},{"name":"acetyl-CoA:histone acetyltransferase activity","type":"related"},{"name":"histone acetokinase activity","type":"related"},{"name":"histone acetylase activity","type":"exact"},{"name":"histone lysine acetyltransferase activity","type":"exact"},{"name":"histone transacetylase activity","type":"related"},{"name":"nucleosome-histone acetyltransferase activity","type":"related"}],"termid":"GO:0004402","terms_by_termid":{"GO:0004402":null,"GO:0010484":null,"GO:0010485":null,"GO:0032931":null,"GO:0036408":null,"GO:0043992":null,"GO:0043993":null,"GO:0043995":null,"GO:0043996":null,"GO:0043997":null,"GO:0043998":null,"GO:0044016":null,"GO:0046972":null}}


id: PR:Q9UT91
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rmp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT91"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease MRP protein subunit rmp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC323.08","synonyms":[{"name":"RNA-processing protein rmp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rmp1","type":"exact"}],"termid":"PR:Q9UT91"}


id: GO:0051411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively and non-covalently with ALP, actinin-associated LIM protein of the Z band. ALP is a PDZ/LIM domain protein found in the Z band.","definition_xrefs":["PMID:11699871"],"gene_count":0,"genotype_count":0,"name":"obsolete ALP binding (obsolete GO:0051411)","synonyms":[{"name":"ALP binding","type":"exact"},{"name":"actinin-associated LIM protein binding","type":"exact"}],"termid":"GO:0051411"}


id: PBO:0058293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4667","termid":"PBO:0058293"}


id: FYPO:0001041
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of thiamine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular thiamine level","synonyms":[{"name":"increased cellular thiamine level during mitotic cell cycle","type":"related"},{"name":"increased cellular thiamine level during vegetative growth","type":"exact"},{"name":"increased cellular vitamin B1 level","type":"exact"},{"name":"increased thiamine accumulation","type":"related"}],"termid":"FYPO:0001041"}


id: PBO:0027329
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_translation_of_ribosomal_proteins","termid":"PBO:0027329"}


id: GO:0035110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the anatomical structures of a leg are generated and organized. A leg is a limb on which an animal walks and stands.","definition_xrefs":["ISBN:0198612001","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete leg morphogenesis (obsolete GO:0035110)","synonyms":[{"name":"leg morphogenesis","type":"exact"}],"termid":"GO:0035110"}


id: GO:0002602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antigen processing and presentation of polysaccharide antigen via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002581"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","termid":"GO:0002601"},{"relation_name":"negatively_regulates","term_name":"antigen processing and presentation of polysaccharide antigen via MHC class II","termid":"GO:0002505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","synonyms":[{"name":"down regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"exact"},{"name":"down-regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"exact"},{"name":"downregulation of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"exact"},{"name":"inhibition of antigen processing and presentation of polysaccharide antigen via MHC class II","type":"narrow"},{"name":"negative regulation of polysaccharide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0002602"}


id: MOD:01399
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to an N6-(ADP-ribosyl)-L-lysine.","definition_xrefs":["PubMed:18436469","RESID:AA0476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-(ADP-ribosyl)-L-lysine","synonyms":[{"name":"(S)-2-amino-6-([adenosine 5'-(trihydrogen diphosphate) 5'->5'-ester with alpha-D-ribofuranosyl]amino)hexanoic acid","type":"exact"},{"name":"2-amino-6-(ADP-ribosyl)amino-hexanoic acid","type":"exact"},{"name":"MOD_RES N6-(ADP-ribosyl)lysine","type":"exact"},{"name":"N(zeta)-ADP-ribosyllysine","type":"exact"},{"name":"N6-(ADP-ribosyl)-L-lysine","type":"exact"},{"name":"N6-[alpha-D-ribofuranoside 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)]-L-lysine","type":"exact"},{"name":"N6-alpha-D-ribofuranosyl-L-lysine 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)","type":"exact"},{"name":"epsilon-ADP-ribosyllysine","type":"exact"}],"termid":"MOD:01399"}


id: PBO:0078658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 11-1","termid":"PBO:0078658"}


id: GO:0180010
data:
  {"annotated_genes":["SJAG_02865","SJAG_02037","SJAG_03126","SJAG_01175","SJAG_02668","SJAG_00961","SJAG_03500","SJAG_00435","SJAG_04022","SJAG_03594","SJAG_03853","SJAG_03624","SJAG_03233","SJAG_03226","SJAG_02720","SJAG_01599","SJAG_01412","SJAG_04942","SJAG_00527","SJAG_01791","SJAG_02551","SJAG_04587"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83719,84466,86691,88886,88994,89506,89528,93260,94208,95161,95694,96371,100768,100805,101048,105886,107377,107651,108036,109654,111378,114297],"is_not":false,"summary":null,"term":"GO:0180010"}]},"cv_name":"biological_process","definition":"Any process involved in transcription termination-coupled 3' processing of RNA polymerase II mRNA transcripts by the 3' end cleavage and addition of a poly(A) tail.","definition_xrefs":["PMID:31499460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA 3'-end processing","termid":"GO:0031124"},{"relation_name":"is_a","term_name":"co-transcriptional RNA 3'-end processing, cleavage and polyadenylation pathway","termid":"GO:0180012"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00435":null,"SJAG_00527":null,"SJAG_00961":null,"SJAG_01175":null,"SJAG_01412":null,"SJAG_01599":null,"SJAG_01791":null,"SJAG_02037":null,"SJAG_02551":null,"SJAG_02668":null,"SJAG_02720":null,"SJAG_02865":null,"SJAG_03126":null,"SJAG_03226":null,"SJAG_03233":null,"SJAG_03500":null,"SJAG_03594":null,"SJAG_03624":null,"SJAG_03853":null,"SJAG_04022":null,"SJAG_04587":null,"SJAG_04942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cotranscriptional 3' processing of RNA polymerase II mRNA transcripts","type":"exact"},{"name":"mRNA polyadenylation","type":"related"}],"termid":"GO:0180010","terms_by_termid":{"GO:0180010":null}}


id: PBO:0088644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear export chaperone","termid":"PBO:0088644"}


id: GO:0097299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile, and contributing to plant-type hypersensitive response, the rapid, localized death of plant cells in response to invasion by a pathogen.","definition_xrefs":["GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete cysteine-type endopeptidase activity involved in plant-type hypersensitive response (obsolete GO:0097299)","synonyms":[{"name":"metacaspase activity involved in plant-type hypersensitive response","type":"narrow"}],"termid":"GO:0097299"}


id: PBO:0045002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death inducer-obliterator 1","termid":"PBO:0045002"}


id: PBO:0048048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formimidoyltransferase cyclodeaminase","termid":"PBO:0048048"}


id: GO:0090108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of high-density lipoprotein particle assembly. High-density lipoprotein particle assembly is the aggregation and arrangement of proteins and lipids to form a high-density lipoprotein particle.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of high-density lipoprotein particle assembly","termid":"GO:0090107"},{"relation_name":"positively_regulates","term_name":"high-density lipoprotein particle assembly","termid":"GO:0034380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"positive regulation of high-density lipoprotein particle assembly","termid":"GO:0090108"}


id: GO:1904574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of selenocysteine insertion sequence binding.","definition_xrefs":["PMID:19716792","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mRNA binding","termid":"GO:1904572"},{"relation_name":"is_a","term_name":"regulation of selenocysteine insertion sequence binding","termid":"GO:1904573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of selenocysteine insertion sequence binding","synonyms":[{"name":"down regulation of SECIS binding","type":"exact"},{"name":"down regulation of selenocysteine insertion sequence binding","type":"exact"},{"name":"down-regulation of SECIS binding","type":"exact"},{"name":"down-regulation of selenocysteine insertion sequence binding","type":"exact"},{"name":"downregulation of SECIS binding","type":"exact"},{"name":"downregulation of selenocysteine insertion sequence binding","type":"exact"},{"name":"inhibition of SECIS binding","type":"narrow"},{"name":"inhibition of selenocysteine insertion sequence binding","type":"narrow"},{"name":"negative regulation of SECIS binding","type":"exact"}],"termid":"GO:1904574"}


id: GO:0103082
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxo-6-methylthiohexanoate + acetyl-CoA + H2O = H+ + 2-(4'-methylthio)butylmalate + coenzyme A.","definition_xrefs":["EC:2.3.3.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"2-(4'-methylthio)butylmalate synthase activity","secondary_identifiers":["MetaCyc:RXNQT-4166"],"termid":"GO:0103082"}


id: GO:0010938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of tubulin heterodimers from one or both ends of a cytoplasmic microtubule.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule depolymerization","termid":"GO:0007019"},{"relation_name":"is_a","term_name":"cytoplasmic microtubule organization","termid":"GO:0031122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"cytoplasmic microtubule depolymerization","termid":"GO:0010938"}


id: GO:0006505
data:
  {"annotated_genes":["SJAG_03878","SJAG_04119","SJAG_05278","SJAG_05219","SJAG_05327","SJAG_06383","SJAG_03506","SJAG_06425","SJAG_02804","SJAG_01570","SJAG_02523","SJAG_02913","SJAG_04337","SJAG_01860","SJAG_02776","SJAG_00831","SJAG_03115","SJAG_01227","SJAG_00846","SJAG_00295","SJAG_03672","SJAG_04165","SJAG_04881","SJAG_04924","SJAG_03066","SJAG_02488","SJAG_04975","SJAG_03801","SJAG_02903","SJAG_00068","SJAG_03292","SJAG_00506","SJAG_01416"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83511,88283,99793,110028,87458],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016255"},{"annotations":[85000,105995,94728,89595,84730,99119,97675,90582,99856,108436,87286,110866,85627,94935,89055,94174,89143,104654,96297,111295,102784,112223,107679,113325,103617,92499,96362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[93571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006676"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycosylphosphatidylinositol anchors, molecular mechanisms for attaching membrane proteins to the lipid bilayer of cell membranes. Structurally they consist of a molecule of phosphatidylinositol to which is linked, via the C-6 hydroxyl of the inositol, a carbohydrate chain. This chain is in turn linked to the protein through an ethanolamine phosphate group, the amino group of which is in amide linkage with the C-terminal carboxyl of the protein chain, the phosphate group being esterified to the C-6 hydroxyl of the terminal mannose of the core carbohydrate chain.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"},{"relation_name":"is_a","term_name":"phosphatidylinositol metabolic process","termid":"GO:0046488"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00295":null,"SJAG_00506":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_01227":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01860":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02903":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04881":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_05219":null,"SJAG_05278":null,"SJAG_05327":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"GPI anchor metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0046472"],"synonyms":[{"name":"GPI anchor metabolism","type":"exact"},{"name":"GPI/GSI anchor metabolic process","type":"broad"},{"name":"GPI/GSI anchor metabolism","type":"broad"},{"name":"glycosylphosphatidylinositol metabolic process","type":"exact"},{"name":"glycosylphosphatidylinositol metabolism","type":"exact"}],"termid":"GO:0006505","terms_by_termid":{"GO:0006506":null,"GO:0006676":null,"GO:0016255":null}}


id: PBO:0068843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 81, pseudogene","termid":"PBO:0068843"}


id: PBO:0057472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 590","termid":"PBO:0057472"}


id: PBO:0045007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodothyronine deiodinase 2","termid":"PBO:0045007"}


id: PBO:0062396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 18 pseudogene","termid":"PBO:0062396"}


id: PBO:0003154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof13","termid":"PBO:0003154"}


id: GO:0042919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of benzoate, the anion of benzoic acid (benzenecarboxylic acid) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["ISBN:0721662544","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"benzoate transport","termid":"GO:0042919"}


id: PBO:0030366
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_multinucleate_multiseptate_vegetative_cell,_single_septa_between_nuclei","termid":"PBO:0030366"}


id: PBO:0042628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 3 pseudogene","termid":"PBO:0042628"}


id: PBO:0091014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Ubc6","termid":"PBO:0091014"}


id: GO:1901745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving prephenate(2-).","definition_xrefs":["PMID:16752890","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"prephenate(2-) metabolic process","synonyms":[{"name":"prephenate metabolism","type":"exact"},{"name":"prephenate(2-) metabolism","type":"exact"}],"termid":"GO:1901745"}


id: GO:0007266
data:
  {"annotated_genes":["SJAG_03361","SJAG_04462"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95601],"is_not":false,"summary":null,"term":"GO:0007266"},{"annotations":[101406],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0035024"}]},"cv_name":"biological_process","definition":"An intracellular signaling cassette in which a small monomeric GTPase of the Rho subfamily relays a signal.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03361":null,"SJAG_04462":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"Rho protein signal transduction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Rho mediated signal transduction","type":"exact"}],"termid":"GO:0007266","terms_by_termid":{"GO:0007266":null,"GO:0035024":null}}


id: PR:000050513
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiotic recombination protein rec8 (Schizosaccharomyces pombe) that has been phosphorylated at the position equivalent to Ser-412 of the amino acid sequence represented by UniProtKB:P36626. Example: UniProtKB:P36626, Ser-412, MOD:00046.","definition_xrefs":["PRO:DAN","PMID:33888556","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic recombination protein rec8 (Schizosaccharomyces pombe)","termid":"PR:000050510"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rec8/Phos(S412)","pombase_gene_id":"SPBC29A10.14","synonyms":[{"name":"PomBase_original_PRO_term_name: meiotic recombination protein rec8 phosphorylated 3 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rec8/Phos:3","type":"exact"},{"name":"UniProtKB:P36626, Ser-412, MOD:00046","type":"narrow"},{"name":"rec8/Phos(S412)","type":"exact"}],"termid":"PR:000050513"}


id: GO:0018861
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-chlorobenzoate + CoA + ATP = 4-chlorobenzoyl-CoA + AMP + diphosphate. This reaction requires magnesium and is part of the bacterial 2,4-dichlorobenzoate degradation pathway.","definition_xrefs":["EC:6.2.1.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-chlorobenzoate-CoA ligase activity","secondary_identifiers":["KEGG_REACTION:R03932","MetaCyc:6.2.1.33-RXN","UM-BBD_reactionID:r0139","RHEA:23220"],"synonyms":[{"name":"4-chlorobenzoate:CoA ligase activity","type":"exact"}],"termid":"GO:0018861"}


id: GO:0030235
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates the activity of nitric oxide synthase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"nitric-oxide synthase regulator activity","synonyms":[{"name":"nitric oxide synthase regulator activity","type":"exact"}],"termid":"GO:0030235"}


id: RO:0002015
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a GO molecular function and a component of that molecular function that positively regulates the activity of the whole.  More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is positively regulated by B.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_regulatory_component_activity","termid":"RO:0002013"},{"relation_name":"is_a","term_name":"positively_regulated_by","termid":"RO:0002336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_positive_regulatory_component_activity","termid":"RO:0002015"}


id: GO:0102213
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coenzyme A + ATP + an in-chain hydroxy fatty acid = diphosphoric acid + AMP + a in-chain hydroxyacyl-CoA.","definition_xrefs":["EC:6.2.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid ligase activity","termid":"GO:0015645"},{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"in-chain hydroxy fatty acyl-CoA synthetase activity","secondary_identifiers":["MetaCyc:RXN-12184"],"termid":"GO:0102213"}


id: PBO:0079766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UFL1 antisense RNA 1","termid":"PBO:0079766"}


id: PBO:0087689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Nup84 nuclear pore and SEACAT subcomplexes; involved in nucleocytoplasmic transport and NPC biogenesis in the nuclear pore subcomplex; subunit of SEACAT, a subcomplex of the SEA complex that inhibits the TORC1 inhibitory role of SEACIT (Iml1p-Npr2p-Npr3p), a GAP for Gtr1p in response to amino acid limitation, thereby resulting in activation of TORC1 signaling; SEA is a coatomer-related complex that associates dynamically with the vacuole; human SEH1 homolog","termid":"PBO:0087689"}


id: PBO:0052662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 30","termid":"PBO:0052662"}


id: PBO:0000231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S26 (predicted)","termid":"PBO:0000231"}


id: GO:1901539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ent-pimara-8(14),15-diene.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene metabolic process","termid":"GO:0042214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"ent-pimara-8(14),15-diene metabolic process","synonyms":[{"name":"ent-pimara-8(14),15-diene metabolism","type":"exact"}],"termid":"GO:1901539"}


id: PBO:0003929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperone activator Aha1 (predicted)","termid":"PBO:0003929"}


id: GO:0044683
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the overall reaction: methyl-Co(III) methylated-thiol-specific corrinoid protein + coenzyme M = Co(I) methylated--thiol-specific corrinoid protein + methyl-CoM.","definition_xrefs":["MetaCyc:RXN-8125","PMID:9371433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"methylthiol:coenzyme M methyltransferase activity","secondary_identifiers":["RHEA:32667","EC:2.1.1.251"],"synonyms":[{"name":"methylthiol:coenzyme M methyl transferase activity","type":"exact"}],"termid":"GO:0044683"}


id: PBO:0061573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrophin 6 alpha (pseudogene)","termid":"PBO:0061573"}


id: PBO:0054138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1504","termid":"PBO:0054138"}


id: PBO:0071503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 6","termid":"PBO:0071503"}


id: GO:0005358
data:
  {"annotated_genes":["SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113301],"is_not":false,"summary":null,"term":"GO:0005358"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose + H+ = glucose + H+. This activity is constitutive and therefore always present, regardless of demand. Symporter activity enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose:proton symporter activity","termid":"GO:0005356"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"high-affinity glucose:proton symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"high-affinity hydrogen/glucose transporter activity","type":"broad"},{"name":"high-affinity hydrogen:glucose symporter activity","type":"exact"},{"name":"high-affinity hydrogen:glucose transporter activity","type":"broad"}],"termid":"GO:0005358","terms_by_termid":{"GO:0005358":null}}


id: PBO:0053351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 242","termid":"PBO:0053351"}


id: PBO:0001989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-mannosyltransferase Ogm2","termid":"PBO:0001989"}


id: PBO:0000214
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene structure may be incorrect","termid":"PBO:0000214"}


id: GO:0060040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a bipolar cell, the last neuron to be generated in the retina.","definition_xrefs":["GOC:tb","GOC:bf","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamatergic neuron differentiation","termid":"GO:1905962"},{"relation_name":"part_of","term_name":"neural retina development","termid":"GO:0003407"},{"relation_name":"part_of","term_name":"retina morphogenesis in camera-type eye","termid":"GO:0060042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal bipolar neuron differentiation","termid":"GO:0060040"}


id: SO:0001362
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methoxycarbonylmethyl_2_thiouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methoxycarbonylmethyl_two_thiouridine","secondary_identifiers":["RNAMOD:070"],"synonyms":[{"name":"5-methoxycarbonylmethyl-2-thiouridine","type":"exact"},{"name":"five methoxycarbonylmethyl two thiouridine","type":"exact"},{"name":"mcm5s2U","type":"exact"}],"termid":"SO:0001362"}


id: GO:0044701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A response to a stimulus that involves only one organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete response to stimulus by single organism (obsolete GO:0044701)","synonyms":[{"name":"response to stimulus by single organism","type":"exact"}],"termid":"GO:0044701"}


id: PBO:0091736
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heteromeric(8)","termid":"PBO:0091736"}


id: PBO:0068039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 344","termid":"PBO:0068039"}


id: PBO:0109399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 26, pseudogene","termid":"PBO:0109399"}


id: PBO:0059123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-P-dolichol utilization defect 1","termid":"PBO:0059123"}


id: PBO:0073035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCTR antisense RNA 1","termid":"PBO:0073035"}


id: PBO:0066923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 225","termid":"PBO:0066923"}


id: GO:0050501
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-glucuronate + UDP-N-acetyl-D-glucosamine = [beta-N-acetyl-D-glucosaminyl-(1->4)-beta-D-glucuronosyl-(1->3)](n) + 2n UDP.","definition_xrefs":["EC:2.4.1.212","MetaCyc:2.4.1.212-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"hyaluronan synthase activity","secondary_identifiers":["Reactome:R-HSA-2160851","RHEA:12528"],"synonyms":[{"name":"HAS activity","type":"broad"},{"name":"alternating UDP-alpha-N-acetyl-D-glucosamine:beta-D-glucuronosyl-(1,3)-[nascent hyaluronan] 4-N-acetyl-beta-D-glucosaminyltransferase and UDP-alpha-D-glucuronate:N-acetyl-beta-D-glucosaminyl-(1,4)-[nascent hyaluronan] 3-beta-D-glucuronosyltransferase activity","type":"related"},{"name":"alternating UDP-alpha-N-acetyl-D-glucosamine:beta-D-glucuronosyl-(1->3)-[nascent hyaluronan] 4-N-acetyl-beta-D-glucosaminyltransferase and UDP-alpha-D-glucuronate:N-acetyl-beta-D-glucosaminyl-(1->4)-[nascent hyaluronan] 3-beta-D-glucuronosyltransferase activity","type":"related"},{"name":"seHAS","type":"related"},{"name":"spHAS","type":"related"}],"termid":"GO:0050501"}


id: PBO:0088417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Tsr1","termid":"PBO:0088417"}


id: PBO:0071844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 39","termid":"PBO:0071844"}


id: GO:0097298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of the nucleus.","definition_xrefs":["GOC:mah","GOC:al","PMID:19366728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component size","termid":"GO:0032535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nucleus size","synonyms":[{"name":"regulation of nuclear size","type":"exact"},{"name":"regulation of nuclear volume","type":"exact"}],"termid":"GO:0097298"}


id: FYPO:0006330
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the attachment of an endoplasmic reticulum membrane to the plasma membrane via molecular tethers occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","GO:0061817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased endoplasmic reticulum-plasma membrane tethering","synonyms":[{"name":"abnormal ER-PM contact formation","type":"related"},{"name":"decreased ER-PM tethering","type":"exact"},{"name":"decreased ER-plasma membrane tethering","type":"exact"},{"name":"decreased endoplasmic reticulum-plasma membrane tethering during mitotic cell cycle","type":"related"},{"name":"decreased endoplasmic reticulum-plasma membrane tethering during vegetative growth","type":"exact"},{"name":"increased ER-PM contact removal","type":"related"},{"name":"increased ER-PM uncoupling","type":"related"},{"name":"reduced endoplasmic reticulum-plasma membrane tethering","type":"exact"}],"termid":"FYPO:0006330"}


id: GO:0060945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"},{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"},{"relation_name":"part_of","term_name":"autonomic nervous system development","termid":"GO:0048483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac neuron differentiation","synonyms":[{"name":"heart neuron differentiation","type":"exact"}],"termid":"GO:0060945"}


id: PBO:0090364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GAP Hba1","termid":"PBO:0090364"}


id: GO:0035832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving berbamunine, an isoquinoline alkaloid.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzyl isoquinoline alkaloid metabolic process","termid":"GO:0046445"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"berbamunine metabolic process","synonyms":[{"name":"berbamunine metabolism","type":"exact"}],"termid":"GO:0035832"}


id: PBO:0091777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple inositol polyphosphate phosphatase","termid":"PBO:0091777"}


id: GO:0060018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of a cells to a specific astrocyte fate and its restriction to develop only into an astrocyte.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell fate commitment","termid":"GO:0021781"},{"relation_name":"part_of","term_name":"astrocyte differentiation","termid":"GO:0048708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"astrocyte fate commitment","termid":"GO:0060018"}


id: PBO:0085816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expressed at both mRNA and protein levels; partially overlaps ORF RSC2/YLR357W","termid":"PBO:0085816"}


id: PBO:0071955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS5 pseudogene 5","termid":"PBO:0071955"}


id: PBO:0030538
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cAMP_level_during_glucose_starvation","termid":"PBO:0030538"}


id: GO:0034517
data:
  {"annotated_genes":["SJAG_02663","SJAG_04502"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77579,96052],"is_not":false,"summary":null,"term":"GO:0034517"}]},"cv_name":"biological_process","definition":"The selective degradation of mature ribosomes by macroautophagy.","definition_xrefs":["PMID:18391941","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02663":null,"SJAG_04502":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0006914","GO:0044248"],"is_obsolete":false,"name":"ribophagy","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0034517","terms_by_termid":{"GO:0034517":null}}


id: PBO:0071802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulation of nuclear pre-mRNA domain containing 2","termid":"PBO:0071802"}


id: PBO:0075901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2","termid":"PBO:0075901"}


id: GO:0015029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete internalization receptor activity (obsolete GO:0015029)","synonyms":[{"name":"internalization receptor activity","type":"exact"}],"termid":"GO:0015029"}


id: PR:Q10178
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A splicing factor 3B subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01797","PANTHER:PTHR12097:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP component prp10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27F1.09c","secondary_identifiers":["UniProtKB:Q10178"],"synonyms":[{"name":"Spom972h-SF3B1","type":"exact"}],"termid":"PR:Q10178"}


id: PBO:0089378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase e1 component alpha subunit Pda1","termid":"PBO:0089378"}


id: PBO:0049597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 15","termid":"PBO:0049597"}


id: PR:Q9UT22
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthioribulose-1-phosphate dehydratase-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.06c","synonyms":[{"name":"Spom972h-SPAC9.06c","type":"exact"}],"termid":"PR:Q9UT22"}


id: PBO:0072909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCAN domain containing 2 pseudogene","termid":"PBO:0072909"}


id: GO:0036462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An extrinsic apoptotic signaling pathway initiated by the binding of the ligand TRAIL (tumor necrosis factor-related apoptosis-inducing ligand) to a death receptor on the cell surface.","definition_xrefs":["PMID:21785459","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:0008625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"TRAIL-activated apoptotic signaling pathway","synonyms":[{"name":"TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"}],"termid":"GO:0036462"}


id: GO:0009433
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cytoplasmic ring located at the base of the bacterial-type flagellar basal body; acts as a rotor; includes three switch proteins, which generate torque and can change their conformational state in a bimodal fashion, so that the motor direction can switch between clockwise and counterclockwise.","definition_xrefs":["PMID:10572114","GOC:mtg_sensu","GOC:cilia","PMID:12624192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum basal body","termid":"GO:0009425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum basal body, C ring","synonyms":[{"name":"flagellar basal body, C ring","type":"exact"},{"name":"flagellin-based flagellum basal body, C ring","type":"exact"}],"termid":"GO:0009433"}


id: PBO:0042817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide synthase 6","termid":"PBO:0042817"}


id: PBO:0066167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal biogenesis factor","termid":"PBO:0066167"}


id: PBO:0069263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 519, pseudogene","termid":"PBO:0069263"}


id: PBO:0034150
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_vector_for","termid":"PBO:0034150"}


id: GO:0048248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CXCR3 chemokine receptor.","definition_xrefs":["GOC:jid","PMID:10556837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CXCR chemokine receptor binding","termid":"GO:0045236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"CXCR3 chemokine receptor binding","termid":"GO:0048248"}


id: PBO:0042066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 136","termid":"PBO:0042066"}


id: PBO:0075895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST7 antisense RNA 1","termid":"PBO:0075895"}


id: PBO:0078104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 12","termid":"PBO:0078104"}


id: SO:0000608
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"snoRNA that is associated with guiding polyuridylation. It contains two short conserved sequence motifs: H box (ANANNA) and ACA (ACA).","direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA_encoding","termid":"SO:0000578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H_ACA_box_snoRNA_encoding","synonyms":[{"name":"H ACA box snoRNA encoding","type":"exact"}],"termid":"SO:0000608"}


id: GO:0045242
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses isocitrate dehydrogenase (NAD+) activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid cycle heteromeric enzyme complex","termid":"GO:0045239"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"isocitrate dehydrogenase complex (NAD+)","termid":"GO:0045242"}


id: PBO:0084445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maltose permease; part of the complex locus MAL4","termid":"PBO:0084445"}


id: RO:0002598
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between c and p if and only if c is capable of some activity a, and a positively regulates p.","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of_regulating","termid":"RO:0002596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of_positively_regulating","termid":"RO:0002598"}


id: GO:1905234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a codeine stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:24914722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to isoquinoline alkaloid","termid":"GO:0071317"},{"relation_name":"is_a","term_name":"response to codeine","termid":"GO:1905233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to codeine","termid":"GO:1905234"}


id: SO:0000173
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved GC-rich region located upstream of the start point of eukaryotic transcription units which may occur in multiple copies or in either orientation; consensus=GGGCGG.","direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"},{"relation_name":"part_of","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GC_rich_promoter_region","synonyms":[{"name":"GC rich promoter region","type":"exact"},{"name":"GC-rich region","type":"exact"},{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:GC_rich_promoter_region","type":"exact"}],"termid":"SO:0000173"}


id: SO:0001816
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that leads to the change of an amino acid within the protein.","direct_ancestors":[{"relation_name":"is_a","term_name":"coding_variant_quality","termid":"SO:0001814"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_synonymous","synonyms":[{"name":"non synonymous","type":"related"}],"termid":"SO:0001816"}


id: GO:0045062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of T cell selection that occurs in extrathymic locations, often resulting T cells of distinct specificities from those selected in the thymus.","definition_xrefs":["PMID:7880383","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell selection","termid":"GO:0045058"},{"relation_name":"part_of","term_name":"extrathymic T cell differentiation","termid":"GO:0033078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"extrathymic T cell selection","synonyms":[{"name":"extrathymic T lymphocyte selection","type":"exact"},{"name":"extrathymic T-cell selection","type":"exact"},{"name":"extrathymic T-lymphocyte selection","type":"exact"}],"termid":"GO:0045062"}


id: PATO:0002430
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality in which the bearer is shaped like a narrow band; ligulate.","definition_xrefs":["thefreedictionary:thefreedictionary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strap-shaped","termid":"PATO:0002430"}


id: GO:0006414
data:
  {"annotated_genes":["SJAG_02493","SJAG_04204","SJAG_03863","SJAG_02738","SJAG_02017","SJAG_04029","SJAG_02096","SJAG_04168","SJAG_01411","SJAG_01536","SJAG_02812","SJAG_05332","SJAG_04756","SJAG_04174","SJAG_04847","SJAG_05000","SJAG_00188","SJAG_01497","SJAG_04157","SJAG_02585","SJAG_02020","SJAG_05271","SJAG_01128","SJAG_02601","SJAG_03094","SJAG_02353","SJAG_02746","SJAG_01074","SJAG_03189","SJAG_04020","SJAG_00541","SJAG_00898","SJAG_00468","SJAG_01438","SJAG_01851","SJAG_02180","SJAG_02871","SJAG_04452","SJAG_04862","SJAG_02189","SJAG_00579","SJAG_04064","SJAG_03677","SJAG_03461"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71788],"is_not":false,"summary":null,"term":"GO:0006414"},{"annotations":[110489],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0140708"},{"annotations":[83760,110805,101626,94407,108478,112386,112387,109596,113043,94406,106665,103965,108479,86628,91191,95151,108414,92779,105230,105901,101467,114996,103156,101466,89663,91414,91749,109597,91192,114995,83759,94369,105902,109957,114568,114567,95152,89665,114566,94368,103157,91748,101155,86627,108415,115045,111801,115046,108480,105229,89664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002182"},{"annotations":[77678,98961,108224,107601,108949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070125"},{"annotations":[95511],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:2001125"},{"annotations":[65819,67586],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045901"},{"annotations":[110059,105555,91536,106225],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0140018"},{"annotations":[102934,110084,99206,112176,83998,87927,95516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072344"}]},"cv_name":"biological_process","definition":"The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"part_of","term_name":"translation","termid":"GO:0006412"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00188":null,"SJAG_00468":null,"SJAG_00541":null,"SJAG_00579":null,"SJAG_00898":null,"SJAG_01074":null,"SJAG_01128":null,"SJAG_01411":null,"SJAG_01438":null,"SJAG_01497":null,"SJAG_01536":null,"SJAG_01851":null,"SJAG_02017":null,"SJAG_02020":null,"SJAG_02096":null,"SJAG_02180":null,"SJAG_02189":null,"SJAG_02353":null,"SJAG_02493":null,"SJAG_02585":null,"SJAG_02601":null,"SJAG_02738":null,"SJAG_02746":null,"SJAG_02812":null,"SJAG_02871":null,"SJAG_03094":null,"SJAG_03189":null,"SJAG_03461":null,"SJAG_03677":null,"SJAG_03863":null,"SJAG_04020":null,"SJAG_04029":null,"SJAG_04064":null,"SJAG_04157":null,"SJAG_04168":null,"SJAG_04174":null,"SJAG_04204":null,"SJAG_04452":null,"SJAG_04756":null,"SJAG_04847":null,"SJAG_04862":null,"SJAG_05000":null,"SJAG_05271":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"translational elongation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006442","GO:0006455"],"synonyms":[{"name":"protein synthesis elongation","type":"broad"},{"name":"translation elongation","type":"exact"}],"termid":"GO:0006414","terms_by_termid":{"GO:0002182":null,"GO:0006414":null,"GO:0045901":null,"GO:0070125":null,"GO:0072344":null,"GO:0140018":null,"GO:0140708":null,"GO:2001125":null}}


id: PBO:0083560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene RNP1","termid":"PBO:0083560"}


id: GO:0075239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a diploid cell undergoes meiosis, and the meiotic products acquire specialized features of asexual motile mononucleate flagellated spores called zoospores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sporangiospore formation","termid":"GO:0034300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"zoospore formation","termid":"GO:0075239"}


id: PBO:0065005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 10","termid":"PBO:0065005"}


id: PBO:0090016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex DNA helicase (human ERCC3) subunit Ptr8","termid":"PBO:0090016"}


id: FYPO:0003008
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of transcription from RNA polymerase II promoter occurs to a lower extent than normal during a cellular response to zinc. Specific genes are more highly transcribed in the presence of zinc in the mutant than in wild type.","definition_xrefs":["PMID:22496451","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of transcription during vegetative growth","termid":"FYPO:0000624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased repression of transcription during cellular response to zinc","synonyms":[{"name":"decreased negative regulation of transcription from RNA polymerase II promoter during cellular response to zinc","type":"exact"},{"name":"decreased repression of transcription during cellular response to zinc during mitotic cell cycle","type":"related"},{"name":"decreased repression of transcription during cellular response to zinc during vegetative growth","type":"exact"},{"name":"decreased transcriptional repression during cellular response to zinc","type":"exact"},{"name":"reduced repression of transcription during cellular response to zinc","type":"exact"}],"termid":"FYPO:0003008"}


id: PBO:0056417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCHF11 divergent transcript","termid":"PBO:0056417"}


id: PBO:0073778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 11","termid":"PBO:0073778"}


id: GO:0160105
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine(22) in tRNA + S-adenosyl-L-methionine = H+ + N(1)-methyladenosine(22) in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (adenine) methyltransferase activity","termid":"GO:0016426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824","GO:0140101","GO:0140098"],"is_obsolete":false,"name":"tRNA (adenine(22)-N1)-methyltransferase activity","secondary_identifiers":["RHEA:43144"],"synonyms":[{"name":"tRNA (adenine(22)-N(1))-methyltransferase activity","type":"exact"},{"name":"tRNA (adenosine(22)-N(1))-methyltransferase activity","type":"exact"}],"termid":"GO:0160105"}


id: MOD:00987
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a hydrogen atom of an L-tyrosine residue with a chlorine atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorinated residue","termid":"MOD:00753"},{"relation_name":"is_a","term_name":"halogenated tyrosine","termid":"MOD:00985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chlorinated tyrosine","synonyms":[{"name":"ClTyr","type":"exact"}],"termid":"MOD:00987"}


id: FYPO:0007929
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to phloxine B. Cells stop growing (and may die) at a concentration of phloxine B that allows wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to phloxine B","synonyms":[{"name":"sensitive to phloxine B during vegetative growth","type":"exact"}],"termid":"FYPO:0007929"}


id: PBO:0017728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CorA family magnesium ion transmembrane transporter","termid":"PBO:0017728"}


id: PBO:0071796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P/MRP subunit p40 pseudogene 2","termid":"PBO:0071796"}


id: PBO:0057273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 497","termid":"PBO:0057273"}


id: GO:0045558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of TRAIL-R1 (TNF-related apoptosis inducing ligand receptor 1), which engages a caspase-dependent apoptotic pathway.","definition_xrefs":["GOC:go_curators","PMID:9311998"],"gene_count":0,"genotype_count":0,"name":"obsolete TRAIL receptor 1 biosynthetic process (obsolete GO:0045558)","synonyms":[{"name":"TRAIL receptor 1 anabolism","type":"exact"},{"name":"TRAIL receptor 1 biosynthesis","type":"exact"},{"name":"TRAIL receptor 1 formation","type":"exact"},{"name":"TRAIL receptor 1 synthesis","type":"exact"},{"name":"tumor necrosis factor receptor superfamily member 10A biosynthetic process","type":"exact"}],"termid":"GO:0045558"}


id: PBO:0074866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 50B","termid":"PBO:0074866"}


id: GO:1900517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of xylose catabolic process to ethanol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of xylose catabolic process to ethanol","termid":"GO:1900515"},{"relation_name":"positively_regulates","term_name":"D-xylose catabolic process to ethanol","termid":"GO:0044577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0006091","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of xylose catabolic process to ethanol","synonyms":[{"name":"activation of xylose catabolic process to ethanol","type":"narrow"},{"name":"activation of xylose catabolism to ethanol","type":"exact"},{"name":"positive regulation of xylose catabolism to ethanol","type":"exact"},{"name":"up regulation of xylose catabolic process to ethanol","type":"exact"},{"name":"up regulation of xylose catabolism to ethanol","type":"exact"},{"name":"up-regulation of xylose catabolic process to ethanol","type":"exact"},{"name":"up-regulation of xylose catabolism to ethanol","type":"exact"},{"name":"upregulation of xylose catabolic process to ethanol","type":"exact"},{"name":"upregulation of xylose catabolism to ethanol","type":"exact"}],"termid":"GO:1900517"}


id: GO:0052822
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: DNA containing 3-methylguanine + H2O = DNA with abasic site + 3-methylguanine. This reaction is the hydrolysis of DNA by cleavage of the N-C1' glycosidic bond between the damaged DNA 3-methylguanine and the deoxyribose sugar to remove the 3-methylguanine, leaving an abasic site.","definition_xrefs":["GOC:elh","PMID:10872450","PMID:9224623","EC:3.2.2.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-3-methylbase glycosylase activity","termid":"GO:0043733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674","GO:0140097"],"is_obsolete":false,"name":"DNA-3-methylguanine glycosylase activity","termid":"GO:0052822"}


id: PBO:0076553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tax1 binding protein 1","termid":"PBO:0076553"}


id: PBO:0069214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 469, pseudogene","termid":"PBO:0069214"}


id: PBO:0052878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 8-3, pseudogene","termid":"PBO:0052878"}


id: PBO:0071680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 12","termid":"PBO:0071680"}


id: GO:0038178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by a C5a component of the complement pathway binding to a complement receptor, and ending with regulation of a downstream cellular process. C5a is a peptide derived from the C5 complement factor.","definition_xrefs":["GOC:jc","Wikipedia:Complement_component_5a","PMID:15313431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement receptor mediated signaling pathway","termid":"GO:0002430"},{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"complement component C5a signaling pathway","synonyms":[{"name":"complement component C5a-induced signaling pathway","type":"exact"}],"termid":"GO:0038178"}


id: PBO:0001651
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain ubp Four Partner","termid":"PBO:0001651"}


id: PBO:0074348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 7","termid":"PBO:0074348"}


id: PR:P87176
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slx8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3D6.11c","synonyms":[{"name":"RING finger protein slx8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RING-dependent E3 ubiquitin-protein ligase slx8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-slx8","type":"exact"},{"name":"synthetic lethal of unknown function protein 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87176"}


id: GO:0051280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the release into the cytosolic compartment of calcium ions sequestered in the endoplasmic reticulum or mitochondria.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of release of sequestered calcium ion into cytosol","termid":"GO:0051279"},{"relation_name":"is_a","term_name":"positive regulation of sequestering of calcium ion","termid":"GO:0051284"},{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transport","termid":"GO:1903170"},{"relation_name":"negatively_regulates","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"negative regulation of release of sequestered calcium ion into cytosol","synonyms":[{"name":"down regulation of release of sequestered calcium ion into cytosol","type":"exact"},{"name":"down-regulation of release of sequestered calcium ion into cytosol","type":"exact"},{"name":"downregulation of release of sequestered calcium ion into cytosol","type":"exact"},{"name":"inhibition of release of sequestered calcium ion into cytosol","type":"narrow"},{"name":"negative regulation of calcium ion (Ca2+) mobilization","type":"broad"},{"name":"negative regulation of calcium mobilization","type":"broad"},{"name":"negative regulation of cytoplasmic release of sequestered calcium ion (Ca2+)","type":"broad"},{"name":"negative regulation of cytoplasmic release of stored calcium ion (Ca2+)","type":"broad"},{"name":"negative regulation of cytosolic release of sequestered calcium ion (Ca2+)","type":"exact"},{"name":"negative regulation of cytosolic release of stored calcium ion (Ca2+)","type":"exact"},{"name":"negative regulation of release of sequestered calcium ion (Ca2+)","type":"broad"},{"name":"negative regulation of release of sequestered calcium ion into cytoplasm","type":"broad"},{"name":"negative regulation of release of stored calcium ion (Ca2+)","type":"broad"},{"name":"negative regulation of release of stored calcium ion (Ca2+) into cytoplasm","type":"broad"},{"name":"negative regulation of release of stored calcium ion (Ca2+) into cytosol","type":"exact"}],"termid":"GO:0051280"}


id: PBO:0051453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 5-48 (non-functional)","termid":"PBO:0051453"}


id: GO:1900878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (Z)-nonadeca-1,14-diene.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"(Z)-nonadeca-1,14-diene metabolic process","synonyms":[{"name":"(Z)-nonadeca-1,14-diene metabolism","type":"exact"}],"termid":"GO:1900878"}


id: GO:0030575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of any of the extra-nucleolar nuclear domains usually visualized by confocal microscopy and fluorescent antibodies to specific proteins.","definition_xrefs":["GOC:mah","GOC:jl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear body organization","synonyms":[{"name":"nuclear body organisation","type":"exact"},{"name":"nuclear body organization and biogenesis","type":"related"}],"termid":"GO:0030575"}


id: PBO:0004135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp14","termid":"PBO:0004135"}


id: PR:P36617
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA repair endonuclease XPF that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04346","PANTHER:PTHR10150:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.01","secondary_identifiers":["UniProtKB:P36617"],"synonyms":[{"name":"Spom972h-ERCC4","type":"exact"}],"termid":"PR:P36617"}


id: PBO:0066109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS guanyl releasing protein 1","termid":"PBO:0066109"}


id: PBO:0068777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 14, pseudogene","termid":"PBO:0068777"}


id: PBO:0017895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyldiphosphate:farnesyldiphosphatefarnesyltransferase (squalene synthase) Erg9","termid":"PBO:0017895"}


id: MOD:00810
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O3-mannosylserine.","definition_xrefs":["RESID:AA0402","PubMed:391559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"},{"relation_name":"is_a","term_name":"mannosylated residue","termid":"MOD:00595"},{"relation_name":"is_a","term_name":"monohexosylated (Hex1)","termid":"MOD:00761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"O-mannosyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(alpha-D-mannopyranosyloxy)propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (Hex)","type":"exact"},{"name":"CARBOHYD O-linked (Man) serine","type":"exact"},{"name":"O-glycosylserine","type":"exact"},{"name":"O-mannopyranosylserine","type":"exact"},{"name":"O-mannosyl-L-serine","type":"exact"},{"name":"O3-mannosylserine","type":"exact"},{"name":"OManSer","type":"exact"}],"termid":"MOD:00810"}


id: PBO:0081904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 861, pseudogene","termid":"PBO:0081904"}


id: GO:0090307
data:
  {"annotated_genes":["SJAG_00794","SJAG_01224","SJAG_04841","SJAG_02761","SJAG_01613","SJAG_02609","SJAG_04745","SJAG_07018","SJAG_02336","SJAG_01297","SJAG_02246","SJAG_04464","SJAG_01546","SJAG_03540","SJAG_03835","SJAG_03116","SJAG_01215","SJAG_03062","SJAG_02332","SJAG_00773","SJAG_04901","SJAG_00244","SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92846,92945,93362,96455,97059,105680,106658,111129,114756],"is_not":false,"summary":null,"term":"GO:0090307"},{"annotations":[74529,91380,90836],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"},{"annotations":[99127,105096,92843,95292],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990810"},{"annotations":[93363,99982,97508,95922,94695,96457,104332,90840],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061804"},{"annotations":[97509,95298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140641"},{"annotations":[90841,93364,97510,95299,104923],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051256"},{"annotations":[107513],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0110161"},{"annotations":[107090],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1901673"}]},"cv_name":"biological_process","definition":"Mitotic bipolar spindle assembly begins with spindle microtubule nucleation from the separated spindle pole body, includes spindle elongation during prometaphase, and is complete when all kinetochores are stably attached the spindle, and the spindle assembly checkpoint is satisfied.","definition_xrefs":["GOC:vw","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle organization","termid":"GO:0007052"},{"relation_name":"is_a","term_name":"spindle assembly","termid":"GO:0051225"},{"relation_name":"part_of","term_name":"mitotic sister chromatid segregation","termid":"GO:0000070"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00773":null,"SJAG_00794":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_02246":null,"SJAG_02332":null,"SJAG_02336":null,"SJAG_02609":null,"SJAG_02761":null,"SJAG_03062":null,"SJAG_03073":null,"SJAG_03116":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_04464":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04901":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0000070","GO:0000226","GO:0008150","GO:0007010","GO:0007049"],"is_obsolete":false,"name":"mitotic spindle assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"spindle assembly involved in mitosis","type":"exact"}],"termid":"GO:0090307","terms_by_termid":{"GO:0000073":null,"GO:0051256":null,"GO:0061804":null,"GO:0090307":null,"GO:0110161":null,"GO:0140641":null,"GO:1901673":null,"GO:1990810":null}}


id: PBO:0068854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 92, pseudogene","termid":"PBO:0068854"}


id: GO:0071726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diacylated bacterial lipopeptide stimulus.","definition_xrefs":["PMID:12077222","PMID:2757794","GOC:add","PMID:12524386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to bacterial lipopeptide","termid":"GO:0071221"},{"relation_name":"is_a","term_name":"response to diacyl bacterial lipopeptide","termid":"GO:0071724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to diacyl bacterial lipopeptide","synonyms":[{"name":"cellular response to diacylated bacterial lipoprotein","type":"exact"}],"termid":"GO:0071726"}


id: GO:0036165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of colonies in filamentous chains of cells as a result of an increase in temperature.","definition_xrefs":["GOC:di","PMID:22365851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filamentous growth of a population of unicellular organisms in response to heat","termid":"GO:0036168"},{"relation_name":"is_a","term_name":"invasive filamentous growth","termid":"GO:0036267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"invasive growth in response to heat","synonyms":[{"name":"invasive growth in response to elevated temperature","type":"exact"},{"name":"invasive growth in response to high temperature","type":"exact"},{"name":"invasive growth in response to temperature stimulus","type":"broad"}],"termid":"GO:0036165"}


id: FYPO:0000445
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in G1 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle arrest in mitotic interphase","termid":"FYPO:0000837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"cell cycle arrest in mitotic G1 phase","synonyms":[{"name":"cell cycle arrest in G1 phase during mitotic cell cycle","type":"exact"},{"name":"cell cycle arrest in mitotic G1 phase during vegetative growth","type":"exact"},{"name":"mitotic G1 phase arrest","type":"exact"},{"name":"mitotic cell cycle arrest in G1 phase","type":"exact"},{"name":"mitotic cell cycle progression in G1 phase: arrested","type":"related"}],"termid":"FYPO:0000445"}


id: GO:0060739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from a mesenchymal cell to an epithelial cell where it is received and interpreted contributing to the progression of the prostate gland over time.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal-epithelial cell signaling","termid":"GO:0060638"},{"relation_name":"part_of","term_name":"prostate gland development","termid":"GO:0030850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"mesenchymal-epithelial cell signaling involved in prostate gland development","synonyms":[{"name":"mesenchymal-epithelial cell signalling involved in prostate gland development","type":"exact"}],"termid":"GO:0060739"}


id: PBO:0076637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein","termid":"PBO:0076637"}


id: GO:1904516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a myofibroblast cell.","definition_xrefs":["GO_REF:0000085","PMID:23026405","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myofibroblast cell apoptotic process","synonyms":[{"name":"MFB apoptosis","type":"narrow"},{"name":"MFB apoptotic process","type":"exact"},{"name":"myofibroblast cell apoptosis","type":"narrow"}],"termid":"GO:1904516"}


id: PBO:0078771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 2-3","termid":"PBO:0078771"}


id: PBO:0113818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocon beta subunit, GEF Sbh1","termid":"PBO:0113818"}


id: PBO:0061000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHP2 ribonucleoprotein","termid":"PBO:0061000"}


id: GO:0098794
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of a synapse that is part of the post-synaptic cell.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynapse","termid":"GO:0098794"}


id: PBO:0046941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 66 member C","termid":"PBO:0046941"}


id: PBO:0017809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin H transmembrane transporter Vht1","termid":"PBO:0017809"}


id: PBO:0036114
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_serine_phosphorylation_at_RxxS_site_during_vegetative_growth","termid":"PBO:0036114"}


id: PBO:0077379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 120B","termid":"PBO:0077379"}


id: PBO:0029427
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_palmitoylation_during_vegetative_growth","termid":"PBO:0029427"}


id: PBO:0003371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase (predicted)","termid":"PBO:0003371"}


id: PBO:0003111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation elongation factor EF-Ts Tsf1","termid":"PBO:0003111"}


id: GO:0010346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to a shoot axis. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ formation","termid":"GO:1905393"},{"relation_name":"part_of","term_name":"shoot system morphogenesis","termid":"GO:0010016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"shoot axis formation","synonyms":[{"name":"shoot formation","type":"related"}],"termid":"GO:0010346"}


id: PBO:0091060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA(Ile)-lysidine synthetase Til1","termid":"PBO:0091060"}


id: GO:0052530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of the resistance gene-dependent defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of symbiont resistance gene-dependent defense response (obsolete GO:0052530)","synonyms":[{"name":"positive regulation by organism of defense response in symbiont by specific elicitors","type":"exact"},{"name":"positive regulation by organism of pathogen-race/symbiont plant cultivar-specific resistance in symbiont","type":"exact"},{"name":"positive regulation by organism of symbiont gene-for-gene resistance","type":"exact"},{"name":"positive regulation by organism of symbiont resistance gene-dependent defense response","type":"exact"}],"termid":"GO:0052530"}


id: GO:0045431
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a dihydroflavonol + 2-oxoglurate + O2 = a flavonol + succinate + CO2 + H2O.","definition_xrefs":["PMID:7904213","EC:1.14.20.6","ISBN:0943088372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"flavonol synthase activity","secondary_identifiers":["RHEA:21088"],"synonyms":[{"name":"FLS activity","type":"related"},{"name":"dihydroflavonol,2-oxoglutarate:oxygen oxidoreductase activity","type":"related"},{"name":"flavonoid 2-oxoglutarate-dependent dioxygenase activity","type":"related"}],"termid":"GO:0045431"}


id: PBO:0069608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 885, pseudogene","termid":"PBO:0069608"}


id: PBO:0078876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPS1 antisense RNA 1","termid":"PBO:0078876"}


id: PBO:0079975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 13","termid":"PBO:0079975"}


id: PBO:0064450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"podocalyxin like 2","termid":"PBO:0064450"}


id: GO:0033464
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GGG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0060090","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"GGG codon-amino acid adaptor activity","synonyms":[{"name":"glycine tRNA","type":"related"}],"termid":"GO:0033464"}


id: GO:0035438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cyclic-di-GMP, cyclic dimeric guanosine monophosphate.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic nucleotide binding","termid":"GO:0030551"},{"relation_name":"is_a","term_name":"guanyl ribonucleotide binding","termid":"GO:0032561"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cyclic-di-GMP binding","synonyms":[{"name":"3',5'-cyclic di-GMP binding","type":"exact"},{"name":"c-di-GMP binding","type":"exact"},{"name":"cyclic dinucleotide di-GMP binding","type":"exact"}],"termid":"GO:0035438"}


id: FYPO:0003866
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell when the cell is in G0 phase is higher than normal. Total protein or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level","termid":"FYPO:0000836"},{"relation_name":"is_a","term_name":"increased level of substance in cell during G0","termid":"FYPO:0002949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased protein level during G0","synonyms":[{"name":"increased protein accumulation during G0","type":"related"},{"name":"increased protein level during cell quiescence","type":"exact"},{"name":"increased protein level during quiescence","type":"exact"}],"termid":"FYPO:0003866"}


id: PBO:0057300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 514a-1","termid":"PBO:0057300"}


id: MOD:00816
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-stearoyl-L-cysteine.","definition_xrefs":["PubMed:8761467","DeltaMass:0","PubMed:2371783","PubMed:3143715","RESID:AA0407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acylated L-cysteine","termid":"MOD:02005"},{"relation_name":"is_a","term_name":"S-stearoylated residue","termid":"MOD:02006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"S-stearoyl-L-cysteine","synonyms":[{"name":"(R)-2-amino-3-(octadecanoylsulfanyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(octadecanoylthio)propanoic acid","type":"exact"},{"name":"LIPID S-stearoyl cysteine","type":"exact"},{"name":"S-stearoyl-L-cysteine","type":"exact"},{"name":"SSteCys","type":"exact"},{"name":"Stearoylation","type":"exact"},{"name":"cysteine octadecanoate thioester","type":"exact"},{"name":"cysteine stearate thioester","type":"exact"}],"termid":"MOD:00816"}


id: PBO:0049340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIH subunit 5","termid":"PBO:0049340"}


id: PBO:0075544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPECC1 divergent transcript","termid":"PBO:0075544"}


id: PBO:0084893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial translational activator specific for the COX3 mRNA; acts together with Pet54p and Pet122p; located in the mitochondrial inner membrane","termid":"PBO:0084893"}


id: PR:Q9Y7U5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rgf3 gene.","definition_xrefs":["UniProtKB:Q9Y7U5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho1 guanine nucleotide exchange factor 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC645.06c","synonyms":[{"name":"Spom972h-rgf3","type":"exact"},{"name":"lethal at division protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7U5"}


id: FYPO:0004117
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, and that has a septum with normal size, shape, or structure.","definition_xrefs":["PomBase:mah","PMID:15116432"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal septum morphology","termid":"FYPO:0006213"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"},{"relation_name":"is_a","term_name":"normal septum morphology","termid":"FYPO:0006213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000004","FYPO:0000257"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, normal septum morphology","synonyms":[{"name":"inviable after spore germination, undivided cell, normal septum morphology","type":"exact"},{"name":"inviable after spore germination, without cell division, normal septum formation","type":"exact"},{"name":"inviable following spore germination, without cell division, normal septum morphology","type":"exact"},{"name":"inviable germinated spore, without cell division, normal septum morphology","type":"exact"},{"name":"lethal after spore germination, without cell division, normal septum morphology","type":"exact"}],"termid":"FYPO:0004117"}


id: PBO:0039093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-hook containing transcription factor 1 pseudogene 1","termid":"PBO:0039093"}


id: PBO:0082784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the TOM (translocase of outer membrane) complex; responsible for recognition and initial import of all mitochondrially directed proteins; involved in transfer of precursors from the Tom70p and Tom20p receptors to the Tom40p pore","termid":"PBO:0082784"}


id: GO:1905112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of centromere clustering at the nuclear envelope.","definition_xrefs":["PMID:22375062","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of centromere clustering at the mitotic nuclear envelope (obsolete GO:1905112)","synonyms":[{"name":"regulation of centromere clustering at the nuclear periphery","type":"exact"},{"name":"regulation of centromere-SPB clustering","type":"related"},{"name":"regulation of kinetochore clustering at SPB","type":"related"},{"name":"regulation of kinetochore clustering at spindle pole body","type":"related"},{"name":"regulation of kinetochore clustering at the old mitotic spindle pole body","type":"related"},{"name":"regulation of kinetochore localization at spindle pole body","type":"related"},{"name":"regulation of rabl configuration","type":"related"}],"termid":"GO:1905112"}


id: PBO:0017001
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eighteen Interacting Centromere protein","termid":"PBO:0017001"}


id: PBO:0053770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1015","termid":"PBO:0053770"}


id: GO:0140145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of copper ions out of the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:vw","PMID:12244050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"copper ion transmembrane transport","termid":"GO:0035434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"copper ion export from vacuole","termid":"GO:0140145"}


id: PBO:0063637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 3","termid":"PBO:0063637"}


id: FYPO:0000218
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of Mre11 complex assembly is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex assembly","termid":"FYPO:0000447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased Mre11 complex assembly","synonyms":[{"name":"MRN complex formation, reduced","type":"exact"},{"name":"decreased Mre11 complex assembly during mitotic cell cycle","type":"related"},{"name":"decreased Mre11 complex assembly during vegetative growth","type":"exact"},{"name":"reduced Mre11 complex assembly","type":"exact"}],"termid":"FYPO:0000218"}


id: PBO:0070261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U11 small nuclear 6, pseudogene","termid":"PBO:0070261"}


id: PBO:0044883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 10","termid":"PBO:0044883"}


id: PBO:0011098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S13","termid":"PBO:0011098"}


id: GO:1901409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphorylation of RNA polymerase II C-terminal domain.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphorylation of RNA polymerase II C-terminal domain (obsolete GO:1901409)","synonyms":[{"name":"activation of CTD domain phosphorylation of RNA polymerase II","type":"exact"},{"name":"activation of generation of II(0) form of RNA polymerase II","type":"exact"},{"name":"activation of generation of hyperphosphorylated CTD of RNA polymerase II","type":"exact"},{"name":"activation of hyperphosphorylation of RNA polymerase II C-terminal domain","type":"exact"},{"name":"activation of phosphorylation of RNA polymerase II C-terminal domain","type":"narrow"},{"name":"positive regulation of CTD domain phosphorylation of RNA polymerase II","type":"exact"},{"name":"positive regulation of generation of II(0) form of RNA polymerase II","type":"exact"},{"name":"positive regulation of generation of hyperphosphorylated CTD of RNA polymerase II","type":"exact"},{"name":"positive regulation of hyperphosphorylation of RNA polymerase II C-terminal domain","type":"exact"},{"name":"up regulation of CTD domain phosphorylation of RNA polymerase II","type":"exact"},{"name":"up regulation of generation of II(0) form of RNA polymerase II","type":"exact"},{"name":"up regulation of generation of hyperphosphorylated CTD of RNA polymerase II","type":"exact"},{"name":"up regulation of hyperphosphorylation of RNA polymerase II C-terminal domain","type":"exact"},{"name":"up regulation of phosphorylation of RNA polymerase II C-terminal domain","type":"exact"},{"name":"up-regulation of CTD domain phosphorylation of RNA polymerase II","type":"exact"},{"name":"up-regulation of generation of II(0) form of RNA polymerase II","type":"exact"},{"name":"up-regulation of generation of hyperphosphorylated CTD of RNA polymerase II","type":"exact"},{"name":"up-regulation of hyperphosphorylation of RNA polymerase II C-terminal domain","type":"exact"},{"name":"up-regulation of phosphorylation of RNA polymerase II C-terminal domain","type":"exact"},{"name":"upregulation of CTD domain phosphorylation of RNA polymerase II","type":"exact"},{"name":"upregulation of generation of II(0) form of RNA polymerase II","type":"exact"},{"name":"upregulation of generation of hyperphosphorylated CTD of RNA polymerase II","type":"exact"},{"name":"upregulation of hyperphosphorylation of RNA polymerase II C-terminal domain","type":"exact"},{"name":"upregulation of phosphorylation of RNA polymerase II C-terminal domain","type":"exact"}],"termid":"GO:1901409"}


id: PBO:0066773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 71","termid":"PBO:0066773"}


id: FYPO:0002741
data:
  {"alleles_by_uniquename":{"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001007"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell executes a mitotic cell cycle process normally (i.e. indistinguishably from wild type). A mitotic cell cycle process is any of the processes that form part of the mitotic cell cycle, and thereby ensures successive accurate and complete genome replication and chromosome segregation.","definition_xrefs":["PomBase:mah","GO:1903047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle","termid":"FYPO:0000411"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04883":null},"genotype_count":1,"genotypes_by_uniquename":{"ptp4delta":{"display_name":"ptp4delta","display_uniquename":"ptp4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04883:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic cell cycle process","references_by_uniquename":{"PMID:36695178":null},"single_locus_annotated_genes":["SJAG_04883"],"single_locus_genotype_uniquenames":["ptp4delta"],"termid":"FYPO:0002741","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0001007":null}}


id: PBO:0089797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human CREG1 ortholog","termid":"PBO:0089797"}


id: PBO:0051692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INO80 complex subunit B","termid":"PBO:0051692"}


id: GO:0007355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Specification of the anterior (head and thoracic segments) of the embryo by the gap genes; exemplified in insects by the actions of hunchback gene product.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"},{"relation_name":"part_of","term_name":"zygotic determination of anterior/posterior axis, embryo","termid":"GO:0007354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior region determination","termid":"GO:0007355"}


id: PBO:0045867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 beta 2","termid":"PBO:0045867"}


id: GO:0140771
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hexadecanoyl-[ACP] + L-lysyl-[protein] = H+ + holo-[ACP] + N(6)-hexadecanoyl-L-lysyl-[protein].","definition_xrefs":["RHEA:70615","PMID:32461253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine N6-palmitoyltransferase activity","termid":"GO:0018031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140096","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"ACP-dependent peptidyl-lysine N6-palmitoyltransferase activity","termid":"GO:0140771"}


id: PBO:0078002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAF3IP2 antisense RNA 1","termid":"PBO:0078002"}


id: PBO:0063457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide deformylase, mitochondrial","termid":"PBO:0063457"}


id: PBO:0054430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1826","termid":"PBO:0054430"}


id: PBO:0087886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor and activator; involved in repression of flocculation-related genes, and activation of stress responsive genes; has direct role in INO1 transcriptional memory; negatively regulated by cAMP-dependent protein kinase A subunit Tpk2p; premature stop codon (C1430T, Q477-stop) in SK1 background is linked to the aggressively invasive phenotype of SK1 relative to BY4741 (S288C)","termid":"PBO:0087886"}


id: PBO:0044885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 11","termid":"PBO:0044885"}


id: GO:0019479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-alanine to D-lactate and ammonia.","definition_xrefs":["MetaCyc:ALACAT2-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-alanine catabolic process","termid":"GO:0042853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520","GO:0044248"],"is_obsolete":false,"name":"L-alanine oxidation to D-lactate and ammonia","termid":"GO:0019479"}


id: FYPO:0007574
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to the mitotic spindle pole body for a shorter time than normal.","definition_xrefs":["PMID:25501814","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle pole body","termid":"FYPO:0000939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased duration of protein localization to mitotic spindle pole body","synonyms":[{"name":"decreased duration of protein localisation to mitotic spindle pole body","type":"exact"},{"name":"decreased duration of protein localization to mitotic SPB","type":"exact"},{"name":"decreased duration of protein localization to mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"decreased duration of protein localization to spindle pole body during vegetative growth","type":"exact"},{"name":"reduced duration protein localization to mitotic spindle pole body","type":"exact"}],"termid":"FYPO:0007574"}


id: PBO:0065291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired related homeobox 1","termid":"PBO:0065291"}


id: PBO:0042345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD81 antisense RNA 1","termid":"PBO:0042345"}


id: PBO:0044439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 8","termid":"PBO:0044439"}


id: PBO:0056200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A9","termid":"PBO:0056200"}


id: PBO:0046021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2A pseudogene 2","termid":"PBO:0046021"}


id: PBO:0054355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1748","termid":"PBO:0054355"}


id: PBO:0087270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ser/Thr protein kinase; regulates the organization and function of the actin cytoskeleton; inhibits clathrin-mediated endocytosis; phosphorylates the Pan1p and Sla1p subunits of the Pan1p-Sla1p-End3p complex, resulting in inhibition of complex formation; inhibits Scd5p through phosphorylation; phosphorylates Pan1p-interacting proteins, Ent1/2 and Yap1801/2; negatively regulated through autophosphorylation; functional overlap with ARK1","termid":"PBO:0087270"}


id: GO:0007051
data:
  {"annotated_genes":["SJAG_02246","SJAG_03116","SJAG_07018","SJAG_04464","SJAG_01837","SJAG_03540","SJAG_01805","SJAG_03835","SJAG_03073","SJAG_00856","SJAG_02761","SJAG_00794","SJAG_02336","SJAG_02609","SJAG_02286","SJAG_01785","SJAG_03345","SJAG_02624","SJAG_02737","SJAG_03673","SJAG_01613","SJAG_01215","SJAG_02795","SJAG_01546","SJAG_02332","SJAG_04003","SJAG_03915","SJAG_02529","SJAG_01756","SJAG_02045","SJAG_01760","SJAG_01297","SJAG_01270","SJAG_00514","SJAG_00078","SJAG_04901","SJAG_02509","SJAG_02886","SJAG_04841","SJAG_04745","SJAG_01224","SJAG_00773","SJAG_03062","SJAG_00930","SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105676],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990734"},{"annotations":[93359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060172"},{"annotations":[113032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030954"},{"annotations":[102506,96449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030953"},{"annotations":[90836,91380,74529],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"},{"annotations":[92842,95290,90837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090306"},{"annotations":[97502],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051232"},{"annotations":[95291,97503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140642"},{"annotations":[104920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000212"},{"annotations":[111205,89866],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990395"},{"annotations":[99127,105096,95292,92843],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990810"},{"annotations":[93362,92846,97059,111129,92945,114756,96455,105680,106658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090307"},{"annotations":[85335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051228"},{"annotations":[104331,97507,103496,114228,95297,99981,99626,114757],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000022"},{"annotations":[99627,90839,96456],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0061805"},{"annotations":[96457,95922,93363,99982,90840,97508,94695,104332],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0061804"},{"annotations":[95298,97509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140641"},{"annotations":[97510,95299,93364,90841,104923],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051256"},{"annotations":[89867,99983,104333,83842,92847,93872,95300,108209,110034,112766,104924,86038,93928,94349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007052"},{"annotations":[107513],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0110161"},{"annotations":[87358,92946,110020],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902441"},{"annotations":[107090],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1901673"},{"annotations":[111132],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0110162"},{"annotations":[85949],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0060236"},{"annotations":[96154,102510,113281,87452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051225"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the spindle, the array of microtubules and associated molecules that forms between opposite poles of a eukaryotic cell during DNA segregation and serves to move the duplicated chromosomes apart.","definition_xrefs":["GOC:go_curators","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"is_a","term_name":"cell cycle 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organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0043146"],"synonyms":[{"name":"spindle organisation","type":"exact"},{"name":"spindle organization and biogenesis","type":"related"},{"name":"spindle stabilization","type":"related"}],"termid":"GO:0007051","terms_by_termid":{"GO:0000022":null,"GO:0000073":null,"GO:0000212":null,"GO:0007052":null,"GO:0030953":null,"GO:0030954":null,"GO:0051225":null,"GO:0051228":null,"GO:0051232":null,"GO:0051256":null,"GO:0060172":null,"GO:0060236":null,"GO:0061804":null,"GO:0061805":null,"GO:0090306":null,"GO:0090307":null,"GO:0110161":null,"GO:0110162":null,"GO:0140641":null,"GO:0140642":null,"GO:1901673":null,"GO:1902441":null,"GO:1990395":null,"GO:1990734":null,"GO:1990810":null}}


id: GO:0032135
data:
  {"annotated_genes":["SJAG_01419","SJAG_01262","SJAG_02226","SJAG_00634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96656,102137,102005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000404"},{"annotations":[102138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032138"},{"annotations":[94253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032141"}]},"cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing an insertion or a deletion.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatched DNA binding","termid":"GO:0030983"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00634":null,"SJAG_01262":null,"SJAG_01419":null,"SJAG_02226":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"DNA insertion or deletion binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA insertion binding","type":"narrow"},{"name":"insertion binding","type":"exact"}],"termid":"GO:0032135","terms_by_termid":{"GO:0000404":null,"GO:0032138":null,"GO:0032141":null}}


id: PBO:0058232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4521","termid":"PBO:0058232"}


id: FYPO:0001943
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of microtubule binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000702","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal microtubule binding","termid":"FYPO:0001943"}


id: FYPO:0006767
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a cyclin-dependent protein kinase activity is increased during the meiotic cell cycle, in cells that have not arrested the meiotic cell cycle under conditions that normally trigger meiotic DNA replication checkpoint signaling and response.","definition_xrefs":["PMID:10521402","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cyclin-dependent protein kinase activity","termid":"FYPO:0004319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"increased cyclin-dependent protein kinase activity in absence of meiotic DNA replication checkpoint arrest","synonyms":[{"name":"increased cyclin-dependent protein kinase activity with abolished meiotic DNA replication checkpoint arrest","type":"exact"}],"termid":"FYPO:0006767"}


id: GO:0015822
data:
  {"annotated_genes":["SJAG_00543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990575"}]},"cv_name":"biological_process","definition":"The directed movement of ornithine, 2,5-diaminopentanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00543":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"ornithine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-ornithine transport","type":"narrow"}],"termid":"GO:0015822","terms_by_termid":{"GO:1990575":null}}


id: FYPO:0002760
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"},{"relation_name":"is_a","term_name":"abnormal cytoplasmic microtubules","termid":"FYPO:0004088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000054","FYPO:0002399","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"short cytoplasmic microtubules","synonyms":[{"name":"short cytoplasmic microtubules during mitotic cell cycle","type":"related"},{"name":"short cytoplasmic microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0002760"}


id: PBO:0078205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 6-7 (non-functional)","termid":"PBO:0078205"}


id: PBO:0086173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for the degradation of mutant 25S rRNAs; functions in Mms1 pathway of nonfunctional 25S rRNA decay; expression induced by DNA damage and null mutations confer increased resistance to hydroxyurea; N-terminal region has a leucine repeat and a WD40 repeat","termid":"PBO:0086173"}


id: PBO:0031588
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_biofilm_formation","termid":"PBO:0031588"}


id: PBO:0030250
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-trehalose_absent_from_cell_during_heat_shock","termid":"PBO:0030250"}


id: PBO:0054475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1875","termid":"PBO:0054475"}


id: FYPO:0008105
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which chromatin moves within the nucleus to a greater extent than normal during stationary phase.","definition_xrefs":["PMID:37128864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin mobility","termid":"FYPO:0007517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased chromatin mobility during stationary phase","termid":"FYPO:0008105"}


id: PBO:0058845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8074","termid":"PBO:0058845"}


id: PBO:0046608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 10","termid":"PBO:0046608"}


id: FYPO:0007069
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which assembly of the ribosomal small subunit is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex assembly","termid":"FYPO:0003628"},{"relation_name":"is_a","term_name":"abnormal ribosome biogenesis","termid":"FYPO:0005017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal ribosomal small subunit assembly","synonyms":[{"name":"abnormal 40S preribosome assembly","type":"narrow"},{"name":"abnormal 40S ribosomal subunit assembly","type":"narrow"},{"name":"abnormal pre-40S ribosome assembly","type":"narrow"},{"name":"abnormal ribosomal small subunit assembly during mitotic cell cycle","type":"related"},{"name":"abnormal ribosomal small subunit assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007069"}


id: PATO:0001368
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's having an irregularly toothed edge.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serration","termid":"PATO:0001976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erose","synonyms":[{"name":"jagged","type":"related"}],"termid":"PATO:0001368"}


id: GO:0120267
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding the pellicle, a structure enclosing some parasite cells such as certain apicomplexa and Euglenozoa. These membranes are associated with an infrastructure of microtubules, microfilaments, and other organelles.","definition_xrefs":["GOC:krc","PMID:30550896","PMID:18095354","GOC:ach","PMID:6993644","PMID:7175771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"},{"relation_name":"part_of","term_name":"pellicle","termid":"GO:0020039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"pellicular membrane","synonyms":[{"name":"pellicle membrane","type":"exact"},{"name":"pellicular plasma membrane","type":"exact"}],"termid":"GO:0120267"}


id: GO:0015364
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + phosphate(in) = dicarboxylate(in) +  phosphate(out).","definition_xrefs":["TC:2.A.29.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"},{"relation_name":"is_a","term_name":"phosphate transmembrane transporter activity","termid":"GO:0005315"},{"relation_name":"is_a","term_name":"solute:inorganic anion antiporter activity","termid":"GO:0005452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"dicarboxylate:phosphate antiporter activity","synonyms":[{"name":"dicarboxylate:inorganic phosphate antiporter activity","type":"exact"}],"termid":"GO:0015364"}


id: GO:0034148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 5 signaling pathway.","definition_xrefs":["PMID:17328678","PMID:16551253","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 5 signaling pathway","termid":"GO:0034147"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 5 signaling pathway","termid":"GO:0034146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 5 signaling pathway","synonyms":[{"name":"negative regulation of TLR5 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 5 signalling pathway","type":"exact"}],"termid":"GO:0034148"}


id: PBO:0066255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX2 pseudogene 3","termid":"PBO:0066255"}


id: GO:0032211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the addition of telomeric repeats by telomerase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of telomere maintenance via telomerase","termid":"GO:0032210"},{"relation_name":"is_a","term_name":"negative regulation of telomere maintenance via telomere lengthening","termid":"GO:1904357"},{"relation_name":"is_a","term_name":"negative regulation of DNA biosynthetic process","termid":"GO:2000279"},{"relation_name":"negatively_regulates","term_name":"telomere maintenance via telomerase","termid":"GO:0007004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0032200"},{"rel_name":"negatively_regulates","termid":"GO:0032200"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0032200","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of telomere maintenance via telomerase","synonyms":[{"name":"down regulation of telomere maintenance via telomerase activity","type":"exact"},{"name":"down-regulation of telomere maintenance via telomerase activity","type":"exact"},{"name":"downregulation of telomere maintenance via telomerase activity","type":"exact"},{"name":"inhibition of telomere maintenance via telomerase","type":"narrow"}],"termid":"GO:0032211"}


id: PR:Q9USQ4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sim3 gene.","definition_xrefs":["UniProtKB:Q9USQ4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NASP-related protein sim3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.15c","synonyms":[{"name":"CENP-A escort protein sim3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sim3","type":"exact"},{"name":"silencing in the middle of the centromere protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USQ4"}


id: PBO:0068390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 208","termid":"PBO:0068390"}


id: FYPO:0005959
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a spindle forms with microtubules emanating from three or more poles.","definition_xrefs":["PMID:15992541","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000120","FYPO:0002399"],"is_obsolete":false,"name":"multipolar spindle","termid":"FYPO:0005959"}


id: GO:0002662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of B cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tolerance induction","termid":"GO:0002644"},{"relation_name":"is_a","term_name":"regulation of B cell tolerance induction","termid":"GO:0002661"},{"relation_name":"negatively_regulates","term_name":"B cell tolerance induction","termid":"GO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of B cell tolerance induction","synonyms":[{"name":"down regulation of B cell tolerance induction","type":"exact"},{"name":"down-regulation of B cell tolerance induction","type":"exact"},{"name":"downregulation of B cell tolerance induction","type":"exact"},{"name":"inhibition of B cell tolerance induction","type":"narrow"},{"name":"negative regulation of B lymphocyte tolerance induction","type":"exact"},{"name":"negative regulation of B-cell tolerance induction","type":"exact"},{"name":"negative regulation of B-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002662"}


id: FYPO:0002226
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells in which cell shape is altered and cell size remains normal. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, abnormal cell shape, normal cell size (obsolete FYPO:0002226)","termid":"FYPO:0002226"}


id: GO:0018766
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydrophloroglucinol + OH- = 3-hydroxy-5-oxohexanoate.","definition_xrefs":["UM-BBD_reactionID:r0008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"dihydrophloroglucinol hydrolase activity","secondary_identifiers":["MetaCyc:R6-RXN","KEGG_REACTION:R07831"],"termid":"GO:0018766"}


id: GO:0007263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette that starts with production of nitric oxide, detection by receptors/sensors for nitric oxide (such as soluble guanylyl cyclase/sGC) and ends with the activation of downstream effectors that further transmit the signal within the cell. Nitric oxide transmits its downstream effects through either cyclic GMP (cGMP)-dependent or independent mechanisms.","definition_xrefs":["GOC:jl","PMID:21549190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"nitric oxide mediated signal transduction","synonyms":[{"name":"NO mediated signal transduction","type":"exact"},{"name":"NO-mediated signal transduction","type":"exact"},{"name":"nitric oxide signaling","type":"exact"},{"name":"nitric oxide-mediated signal transduction","type":"exact"}],"termid":"GO:0007263"}


id: PBO:0028690
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_prospore-specific_spindle_pole_body_remodeling","termid":"PBO:0028690"}


id: GO:0007174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of epidermal growth factor (EGF), following internalization of the receptor-bound ligand into the signal-receiving cell. Full breakdown of epidermal growth factor results in a ligand that is unable to bind and activate its receptor.","definition_xrefs":["GOC:signaling","GOC:bf","PMID:2985587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein catabolic process","termid":"GO:0030163"},{"relation_name":"is_a","term_name":"negative regulation of epidermal growth factor receptor signaling pathway","termid":"GO:0042059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0030163"],"is_obsolete":false,"name":"epidermal growth factor catabolic process","synonyms":[{"name":"EGF breakdown","type":"exact"},{"name":"EGF catabolism","type":"exact"},{"name":"EGF receptor ligand processing","type":"related"},{"name":"epidermal growth factor breakdown","type":"exact"},{"name":"epidermal growth factor catabolism","type":"exact"},{"name":"epidermal growth factor ligand processing","type":"related"},{"name":"intracellular EGF processing","type":"related"},{"name":"receptor-mediated EGF processing","type":"related"}],"termid":"GO:0007174"}


id: GO:0039680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a virus, or part of a virus, towards the host cell nucleus using actin filaments.","definition_xrefs":["VZ:991","UniProtKB-KW:KW-1178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-dependent intracellular transport of virus","termid":"GO:0075520"},{"relation_name":"is_a","term_name":"transport of viral material towards nucleus","termid":"GO:0075606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"actin-dependent intracellular transport of virus towards nucleus","synonyms":[{"name":"actin-dependent intracellular transport of viral material towards nucleus","type":"exact"},{"name":"actin-dependent inwards viral transport","type":"exact"}],"termid":"GO:0039680"}


id: PATO:0001317
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A temperature which is increased by a high degree.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased temperature","termid":"PATO:0001305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"severe increased temperature","termid":"PATO:0001317"}


id: PBO:0002628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose 5-phosphate isomerase (predicted)","termid":"PBO:0002628"}


id: PBO:0042323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD44 antisense RNA 1","termid":"PBO:0042323"}


id: PBO:0076811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEN1 subunit of CST complex","termid":"PBO:0076811"}


id: PBO:0072059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 29","termid":"PBO:0072059"}


id: PBO:0087920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor TFIIB; a general transcription factor required for transcription initiation and start site selection by RNA polymerase II","termid":"PBO:0087920"}


id: GO:0080123
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a jasmonate + an L-alpha-amino acid + ATP = a jasmonyl-L-amino acid + AMP + diphosphate + H+. In Arabidopsis, isoleucine is the principal amino acid that conjugates with JA to form JA (JA-Ile). Other amino acid can be conjugated with JA such as valine, leucine, and phenylalanine.","definition_xrefs":["PMID:33821356","PMID:17291501","PMID:15258265","RHEA:55772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"jasmonoyl-L-amino acid ligase activity","secondary_identifiers":["EC:6.3.2.52"],"synonyms":[{"name":"ja-amino synthetase activity","type":"exact"},{"name":"jasmonate-amido synthetase activity","type":"exact"},{"name":"jasmonate-amino acid conjugate synthetase activity","type":"exact"},{"name":"jasmonate-amino acid synthetase activity","type":"exact"},{"name":"jasmonate-amino synthetase activity","type":"exact"},{"name":"jasmonate:amino acid synthetase activity","type":"exact"},{"name":"jasmonic acid-amino synthetase activity","type":"exact"},{"name":"jasmonyl-amino synthetase activity","type":"exact"}],"termid":"GO:0080123"}


id: PBO:0042736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein N","termid":"PBO:0042736"}


id: PBO:0090784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Erv46","termid":"PBO:0090784"}


id: FYPO:0008009
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere clustering is abnormal. Telomere clustering gathers telomeres during or prior to tethering to the nuclear periphery during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mlr","PMID:15615848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"},{"relation_name":"is_a","term_name":"abnormal telomere localization","termid":"FYPO:0007418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal interphase mitotic telomere clustering during vegetative growth","synonyms":[{"name":"abnormal interphase telomere clustering","type":"broad"},{"name":"abnormal mitotic interphase telomere clustering","type":"exact"},{"name":"abnormal telomere clustering during vegetative growth","type":"exact"}],"termid":"FYPO:0008009"}


id: PBO:0070732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 2","termid":"PBO:0070732"}


id: PBO:0082594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Class E protein of the vacuolar protein-sorting (Vps) pathway; binds Vps4p and directs it to dissociate ESCRT-III complexes; forms a functional and physical complex with Ist1p; human ortholog may be altered in breast tumors","termid":"PBO:0082594"}


id: GO:0047048
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxybenzyl alcohol + NADP+ = 3-hydroxybenzaldehyde + H+ + NADPH.","definition_xrefs":["EC:1.1.1.97","RHEA:22340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-hydroxybenzyl-alcohol dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.97-RXN","KEGG_REACTION:R04136"],"synonyms":[{"name":"3-hydroxybenzyl-alcohol:NADP+ oxidoreductase activity","type":"related"},{"name":"m-hydroxybenzyl alcohol (NADP) dehydrogenase activity","type":"related"},{"name":"m-hydroxybenzyl alcohol dehydrogenase activity","type":"related"},{"name":"m-hydroxybenzylalcohol dehydrogenase activity","type":"related"}],"termid":"GO:0047048"}


id: PBO:0086046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in RNA metabolism; has structural similarity to SBDS, the human protein mutated in Shwachman-Diamond Syndrome (the yeast SBDS ortholog is SDO1); null mutation suppresses cdc13-1 temperature sensitivity; protein abundance increases in response to DNA replication stress","termid":"PBO:0086046"}


id: PR:O59676
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.13","synonyms":[{"name":"Spom972h-pdp1","type":"exact"},{"name":"set9-associated factor pdp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59676"}


id: PBO:0081599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 521","termid":"PBO:0081599"}


id: PBO:0027641
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_caffeine_during_meiosis_II","termid":"PBO:0027641"}


id: PBO:0066928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 230","termid":"PBO:0066928"}


id: PBO:0061743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexophilin 2","termid":"PBO:0061743"}


id: PR:Q8TFH7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA-splicing endonuclease subunit Sen2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR21227:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit sen2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB17E12.07c","secondary_identifiers":["UniProtKB:Q8TFH7"],"synonyms":[{"name":"SPAPB17E12.07c","type":"related"},{"name":"Spom972h-TSEN2","type":"exact"},{"name":"tRNA-intron endonuclease sen2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q8TFH7"}


id: PBO:0050808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hormonally up-regulated Neu-associated kinase","termid":"PBO:0050808"}


id: PBO:0041411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C7","termid":"PBO:0041411"}


id: PBO:0039248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALDH1L1 antisense RNA 2","termid":"PBO:0039248"}


id: GO:0099038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the movement of ceramide from the cytosolic to the exoplasmic leaftlet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["GOC:dos","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid floppase activity","termid":"GO:0046623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140303"}],"interesting_parent_ids":["GO:0140303","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ceramide floppase activity","synonyms":[{"name":"ATP-dependent ceramide transporter activity","type":"broad"},{"name":"ATPase-coupled ceramide transporter activity","type":"broad"},{"name":"ceramide floppase activity (cytosolic to exoplasmic leaftlet)","type":"exact"},{"name":"ceramide-translocating ATPase activity","type":"broad"}],"termid":"GO:0099038"}


id: GO:2001301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a lipoxin. A lipoxin is a non-classic eicosanoid and signaling molecule that has four conjugated double bonds and is derived from arachidonic acid.","definition_xrefs":["GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"},{"relation_name":"is_a","term_name":"lipoxin metabolic process","termid":"GO:2001300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipoxin biosynthetic process","synonyms":[{"name":"lipoxin anabolism","type":"exact"},{"name":"lipoxin biosynthesis","type":"exact"},{"name":"lipoxin formation","type":"exact"},{"name":"lipoxin synthesis","type":"exact"}],"termid":"GO:2001301"}


id: PBO:0054951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2365","termid":"PBO:0054951"}


id: GO:0014870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muscle inactivity stimulus.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to inactivity","termid":"GO:0014854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to muscle inactivity","termid":"GO:0014870"}


id: PBO:0042333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD59 molecule (CD59 blood group)","termid":"PBO:0042333"}


id: PBO:0083434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YKR041W","termid":"PBO:0083434"}


id: GO:0048629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process of establishing the non-random spatial arrangement of trichomes on the surface and margin of a leaf. Process involves signaling between adjacent epidermal cells that results in differentiation of some epidermal cells into trichomes.","definition_xrefs":["GOC:jid","GOC:mtg_sensu","GOC:sm","GOC:tb","ISBN:0865427429","PMID:10368181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"cell-cell signaling involved in cell fate commitment","termid":"GO:0045168"},{"relation_name":"part_of","term_name":"trichome differentiation","termid":"GO:0010026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trichome patterning","synonyms":[{"name":"trichome distribution","type":"broad"},{"name":"trichome pattern biosynthesis","type":"exact"},{"name":"trichome pattern formation","type":"exact"},{"name":"trichome pattern specification","type":"related"},{"name":"trichome spacing","type":"exact"}],"termid":"GO:0048629"}


id: PBO:0038945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acireductone dioxygenase 1","termid":"PBO:0038945"}


id: FYPO:0004449
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during metaphase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during mitosis","termid":"FYPO:0004357"},{"relation_name":"is_a","term_name":"decreased protein phosphorylation during meiotic cell cycle","termid":"FYPO:0005577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0002494","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein phosphorylation during mitotic metaphase","synonyms":[{"name":"decreased protein phosphorylation during metaphase of mitosis","type":"exact"},{"name":"decreased protein phosphorylation during mitotic metaphase during vegetative growth","type":"exact"},{"name":"decreased protein/peptide phosphorylation during mitotic metaphase","type":"exact"},{"name":"reduced protein phosphorylation during mitotic metaphase","type":"exact"}],"termid":"FYPO:0004449"}


id: GO:0014860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of neurotransmitter into the synaptic cleft involved in skeletal muscle contraction. A neurotransmitter is any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell. Among the many substances that have the properties of a neurotransmitter are acetylcholine, noradrenaline, adrenaline, dopamine, glycine, gamma aminobutyrate, glutamic acid, substance P, enkephalins, endorphins and serotonin.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"part_of","term_name":"regulation of skeletal muscle contraction by neural stimulation via neuromuscular junction","termid":"GO:0014852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"neurotransmitter secretion involved in regulation of skeletal muscle contraction","synonyms":[{"name":"neurotransmitter secretion involved in control of skeletal muscle contraction","type":"exact"}],"termid":"GO:0014860"}


id: PR:O13747
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A BRCA1-associated protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01471","PANTHER:PTHR24007:SF8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING finger protein ETP1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.13","secondary_identifiers":["UniProtKB:O13747"],"synonyms":[{"name":"BRAP2 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-BRAP","type":"exact"}],"termid":"PR:O13747"}


id: PR:Q10359
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gmh3 gene.","definition_xrefs":["UniProtKB:Q10359","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase gmh3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.06c","synonyms":[{"name":"Spom972h-gmh3","type":"exact"}],"termid":"PR:Q10359"}


id: FYPO:0000644
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"711-723","gene_uniquename":"SJAG_01143","name":"mid1-delta(711-723 a.a.)","uniquename":"SJAG_01143:allele-2"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115506],"is_not":false,"summary":null,"term":"FYPO:0000644"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cellular protein localization is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01143":null},"genotype_count":1,"genotypes_by_uniquename":{"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"mid1-delta(711-723 a.a.)(aa)","display_uniquename":"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-2","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization during vegetative growth","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_01143"],"single_locus_genotype_uniquenames":["mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"normal cellular protein localization during vegetative growth","type":"exact"},{"name":"normal protein localisation during vegetative growth","type":"exact"},{"name":"normal protein localization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000644","terms_by_termid":{"FYECO:0000137":null,"FYPO:0000644":null}}


id: PBO:0109372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 6B","termid":"PBO:0109372"}


id: PBO:0000921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase, TRAMP complex subunit Mtr4","termid":"PBO:0000921"}


id: PBO:0057036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 129-2","termid":"PBO:0057036"}


id: PBO:0029148
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_methylenetetrahydrofolate_reductase_(NADPH)_activity","termid":"PBO:0029148"}


id: PBO:0087423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit a of the F0 sector of mitochondrial F1F0 ATP synthase; mitochondrially encoded; translation is specifically activated by Atp22p; ATP6 and ATP8 mRNAs are not translated in the absence of the F1 sector of ATPase; mutations in human ortholog MT-ATP6 are associated with neurodegenerative disorders such as Neurogenic Ataxia and Retinitis Pigmentosa (NARP), Leigh syndrome (LS), Charcot-Marie-Tooth (CMT), and ataxia telangiectasia","termid":"PBO:0087423"}


id: PBO:0039728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B receptor","termid":"PBO:0039728"}


id: PBO:0002959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial sulfhydryl oxidase (predicted)","termid":"PBO:0002959"}


id: GO:1902787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dodecane stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:23826995","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to alkane","termid":"GO:1902779"},{"relation_name":"is_a","term_name":"response to dodecane","termid":"GO:1902786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dodecane","termid":"GO:1902787"}


id: GO:0015878
data:
  {"annotated_genes":["SJAG_02780","SJAG_02779"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70832,88117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905135"}]},"cv_name":"biological_process","definition":"The directed movement of biotin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Biotin is cis-tetrahydro-2-oxothieno(3,4-d)imidazoline-4-valeric acid; the (+) enantiomer is very widely distributed in cells and serves as a carrier in a number of enzymatic beta-carboxylation reactions.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"},{"relation_name":"is_a","term_name":"vitamin transport","termid":"GO:0051180"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02779":null,"SJAG_02780":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"biotin transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"vitamin B7 transport","type":"exact"},{"name":"vitamin H transport","type":"exact"}],"termid":"GO:0015878","terms_by_termid":{"GO:1905135":null}}


id: GO:0033664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont activates, maintains or increases levels of defense-related proteins in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of host defense-related protein level (obsolete GO:0033664)","termid":"GO:0033664"}


id: GO:0007232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated in response to osmotic change, as mediated through a Sho1 osmosensor system.","definition_xrefs":["GOC:jl","PMID:26787842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osmosensory signaling pathway","termid":"GO:0007231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"osmosensory signaling pathway via Sho1 osmosensor","synonyms":[{"name":"osmosensory signalling pathway via Sho1 osmosensor","type":"exact"},{"name":"signal transduction during osmotic stress via Sho1 osmosensor","type":"exact"}],"termid":"GO:0007232"}


id: GO:0070430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of the nucleotide-binding oligomerization domain containing 1 (NOD1) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0070426"},{"relation_name":"is_a","term_name":"regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway","termid":"GO:0070428"},{"relation_name":"positively_regulates","term_name":"nucleotide-binding oligomerization domain containing 1 signaling pathway","termid":"GO:0070427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway","synonyms":[{"name":"positive regulation of NOD1 signaling pathway","type":"exact"},{"name":"positive regulation of nucleotide-binding oligomerization domain containing 1 signalling pathway","type":"exact"}],"termid":"GO:0070430"}


id: GO:0103066
data:
  {"annotated_genes":["SJAG_02855"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106155],"is_not":false,"summary":null,"term":"GO:0103066"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4alpha-carboxy-4beta-methyl-5alpha-cholesta-8-en-3beta-ol + NAD(P) = 4alpha-methyl-5alpha-cholesta-8-en-3-one + carbon dioxide + NAD(P)H.","definition_xrefs":["GOC:pz","EC:1.1.1.170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4alpha-carboxy-4beta-methyl-5alpha-cholesta-8-en-3beta-ol:NAD(P)+ 3-oxidoreductase (decarboxylating) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN66-18"],"termid":"GO:0103066","terms_by_termid":{"GO:0103066":null}}


id: PBO:0035777
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_spindle_pole_body_oscillation","termid":"PBO:0035777"}


id: PBO:0081030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 11B","termid":"PBO:0081030"}


id: PBO:0077467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 186","termid":"PBO:0077467"}


id: GO:0042164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the alpha subunit of interleukin-12.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-12 binding","termid":"GO:0019972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-12 alpha subunit binding","synonyms":[{"name":"CLMFp35 binding","type":"exact"},{"name":"IL-12A binding","type":"exact"},{"name":"IL-12p35 binding","type":"exact"},{"name":"NKSFp35 binding","type":"exact"}],"termid":"GO:0042164"}


id: GO:1905163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phagosome maturation.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of phagosome maturation","termid":"GO:1905162"},{"relation_name":"negatively_regulates","term_name":"phagosome maturation","termid":"GO:0090382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phagosome maturation","synonyms":[{"name":"down regulation of phagosome maturation","type":"exact"},{"name":"down-regulation of phagosome maturation","type":"exact"},{"name":"downregulation of phagosome maturation","type":"exact"},{"name":"inhibition of phagosome maturation","type":"narrow"}],"termid":"GO:1905163"}


id: PR:Q9P7H1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tyrosine-protein phosphatase Clp1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PomBase:MAH","PMID:11683392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine-protein phosphatase Clp1","termid":"PR:000027623"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine-protein phosphatase Clp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.09c","secondary_identifiers":["PR:000027624","UniProtKB:Q9P7H1"],"synonyms":[{"name":"CDC fourteen-like phosphatase 1","type":"exact"},{"name":"CLP1","type":"related"},{"name":"FLP1","type":"related"},{"name":"SPAC1782.09C","type":"related"},{"name":"Spom972h-clp1","type":"exact"},{"name":"tyrosine-protein phosphatase CDC14 homolog","type":"exact"}],"termid":"PR:Q9P7H1"}


id: PBO:0049279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1 to S phase transition 2","termid":"PBO:0049279"}


id: PBO:0111744
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-fungal Zn(2)-Cys(6) binuclear cluster domain","termid":"PBO:0111744"}


id: GO:0098812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end of a rRNA, occurring as part of the process of polyadenylation-dependent rRNA catabolism in the nucleus.","definition_xrefs":["GOC:dph","GOC:jl","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear rRNA polyadenylation involved in polyadenylation-dependent rRNA catabolic process (obsolete GO:0098812)","synonyms":[{"name":"nuclear rRNA polyadenylation during polyadenylation-dependent rRNA catabolic process","type":"related"},{"name":"nuclear rRNA polyadenylation involved in poly(A)-dependent rRNA catabolic process","type":"related"}],"termid":"GO:0098812"}


id: PBO:0081885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 835","termid":"PBO:0081885"}


id: PBO:0000395
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.7","termid":"PBO:0000395"}


id: PBO:0083427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YBR063C","termid":"PBO:0083427"}


id: GO:0102117
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A9 + S-adenosyl-L-methionine = gibberellin A9 methyl ester + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","EC:2.1.1.275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"gibberellin A9 carboxyl methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11358","RHEA:36119"],"termid":"GO:0102117"}


id: FYPO:0000948
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is shaped in the form of a sphere, and has a normal volume.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"spherical vegetative cell","termid":"FYPO:0000129"},{"relation_name":"is_a","term_name":"spherical vegetative cell","termid":"FYPO:0000129"},{"relation_name":"is_a","term_name":"normal volume spheroid vegetative cell","termid":"FYPO:0000946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001985","FYPO:0001320","FYPO:0000257","FYPO:0000005"],"is_obsolete":false,"name":"normal volume spherical vegetative cell","synonyms":[{"name":"normal volume orb during vegetative growth","type":"exact"},{"name":"normal volume spherical cell during vegetative growth","type":"exact"},{"name":"normal volume spherical vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000948"}


id: PBO:0091445
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human PSMD14","termid":"PBO:0091445"}


id: GO:0008955
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)](n)-di-trans,octa-cis-undecaprenyl diphosphate + beta-D-GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-di-trans,octa-cis-undecaprenyl diphosphate = [GlcNAc-(1->4)-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)](n+1)-di-trans-octa-cis-undecaprenyl diphosphate + di-trans,octa-cis-undecaprenyl diphosphate + H+.","definition_xrefs":["RHEA:23708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"peptidoglycan glycosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-14712","EC:2.4.99.28"],"synonyms":[{"name":"PG-II activity","type":"related"},{"name":"bactoprenyldiphospho-N-acetylmuramoyl-(N-acetyl-D-glucosaminyl)-pentapeptide:peptidoglycan N-acetylmuramoyl-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"penicillin binding protein (3 or 1B) activity","type":"narrow"},{"name":"peptidoglycan TGase activity","type":"related"},{"name":"peptidoglycan transglycosylase activity","type":"related"},{"name":"undecaprenyldiphospho-N-acetyl-D-glucosaminyl-(1->4)-(N-acetyl-D-muramoylpentapeptide):undecaprenyldiphospho-(N-acetyl-D-glucosaminyl-(1->4)-N-acetyl-D-muramoylpentapeptide) disaccharidetransferase activity","type":"related"}],"termid":"GO:0008955"}


id: GO:0046440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-lysine, the L-enantiomer of (S)-2,6-diaminohexanoic acid, i.e. (2S)-2,6-diaminohexanoic acid.","definition_xrefs":["GOC:jsg","GOC:ai","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysine metabolic process","termid":"GO:0006553"},{"relation_name":"is_a","term_name":"aspartate family amino acid metabolic process","termid":"GO:0009066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-lysine metabolic process","synonyms":[{"name":"L-lysine metabolism","type":"exact"}],"termid":"GO:0046440"}


id: PBO:0090696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocysteine methyltransferase","termid":"PBO:0090696"}


id: GO:0060988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of macromolecules to form a macromolecular complex that contains a tube of lipid surrounded by a protein coat involved in membrane shaping of vesicle membranes as they fuse or undergo fission.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lipid complex assembly","termid":"GO:0065005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"lipid tube assembly","synonyms":[{"name":"lipid tubulation","type":"exact"}],"termid":"GO:0060988"}


id: GO:0005539
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a glycan (polysaccharide) containing a substantial proportion of aminomonosaccharide residues.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"glycosaminoglycan binding","termid":"GO:0005539"}


id: GO:2000670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dendritic cell apoptotic process.","definition_xrefs":["GOC:obol","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte apoptotic process","termid":"GO:2000108"},{"relation_name":"is_a","term_name":"regulation of dendritic cell apoptotic process","termid":"GO:2000668"},{"relation_name":"positively_regulates","term_name":"dendritic cell apoptotic process","termid":"GO:0097048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dendritic cell apoptotic process","synonyms":[{"name":"positive regulation of dendritic cell apoptosis","type":"narrow"}],"termid":"GO:2000670"}


id: PBO:0064974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 30, pseudogene","termid":"PBO:0064974"}


id: PBO:0056996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR34B and MIR34C host gene","termid":"PBO:0056996"}


id: PBO:0002892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cds1/Rad53/Chk2 family protein kinase Mek1","termid":"PBO:0002892"}


id: PBO:0057028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 125a","termid":"PBO:0057028"}


id: PBO:0063809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylase kinase catalytic subunit gamma 1 pseudogene 1","termid":"PBO:0063809"}


id: PR:Q09140
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UDP-glucose:glycoprotein glucosyltransferase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11226:SF0","PRO:DNx","OMA:SCHPO02557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose:glycoprotein glucosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPJ4664.06","secondary_identifiers":["UniProtKB:Q09140"],"synonyms":[{"name":"Spom972h-UGGT1","type":"exact"},{"name":"UDP--Glc:glycoprotein glucosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"UGT (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09140"}


id: GO:0030916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process resulting in the transition of the otic placode into the otic vesicle, a transient embryonic structure formed during development of the vertebrate inner ear.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube formation","termid":"GO:0072175"},{"relation_name":"part_of","term_name":"otic vesicle morphogenesis","termid":"GO:0071600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"otic vesicle formation","synonyms":[{"name":"otocyst biosynthesis","type":"exact"},{"name":"otocyst formation","type":"exact"}],"termid":"GO:0030916"}


id: FYPO:0000003
data:
  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yeast cell population 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id: PBO:0071677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 9","termid":"PBO:0071677"}


id: GO:0098616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2SeO4 => diphosphate + adenylylselenate.","definition_xrefs":["PMID:2537056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016779"],"is_obsolete":false,"name":"selenate adenylyltransferase (ATP) activity","secondary_identifiers":["Reactome:R-HSA-2408525"],"termid":"GO:0098616"}


id: PBO:0048342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 53","termid":"PBO:0048342"}


id: GO:0015130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of mevalonate from one side of a membrane to the other. Mevalonate is the anion of mevalonic acid; its (R)-enantiomer is a strategic intermediate derived from hydroxymethylglutaryl-CoA in the biosynthesis of polyprenyl compounds.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"mevalonate transmembrane transporter activity","synonyms":[{"name":"monocarboxylate (lactate, pyruvate, mevalonate) uptake/efflux porter activity","type":"related"}],"termid":"GO:0015130"}


id: PBO:0018181
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Encephalopathy","termid":"PBO:0018181"}


id: GO:0007340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The discharge, by sperm, of a single, anterior secretory granule following the sperm's attachment to the zona pellucida of the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the exocytosis of the acrosomal contents into the zona pellucida.","definition_xrefs":["PMID:11175768","PMID:21042299","PMID:3886029","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acrosome reaction","secondary_identifiers":["Wikipedia:Acrosome_reaction"],"termid":"GO:0007340"}


id: PBO:0086930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab escort protein; type II geranylgeranyltransferase complex (Bet2p-Bet4p) chaperone that complexes with newly synthesized Rab GTPases, like Ypt1p and Sec4p, leading to their prenylation and membrane delivery; modulates the TOR pathway through interactions with Sfp1p; alters the kinetics of MAPK pathway activation and polarity reorganization during filamentous growth; sequence similarity to mammalian choroideraemia gene; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0086930"}


id: GO:0019393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucarate, the anion of glucaric acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucarate metabolic process","termid":"GO:0019392"},{"relation_name":"is_a","term_name":"aldaric acid biosynthetic process","termid":"GO:0019578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glucarate biosynthetic process","synonyms":[{"name":"glucarate anabolism","type":"exact"},{"name":"glucarate biosynthesis","type":"exact"},{"name":"glucarate formation","type":"exact"},{"name":"glucarate synthesis","type":"exact"}],"termid":"GO:0019393"}


id: MOD:00743
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a molybdenum atom or a cluster containing molybdenum for hydrogen atoms, or that coordinates a molybdenum ion.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdenum containing modified residue","synonyms":[{"name":"MoRes","type":"exact"}],"termid":"MOD:00743"}


id: PBO:0043524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 6","termid":"PBO:0043524"}


id: PR:Q10171
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- uch1 gene.","definition_xrefs":["UniProtKB:Q10171","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase Uch1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27F1.03c","synonyms":[{"name":"SPAC27F1.03c","type":"related"},{"name":"Spom972h-uch1","type":"exact"},{"name":"ubiquitin carboxyl-terminal hydrolase 1 (Schizosaccharomyces pombe 972h-)","type":"related"}],"termid":"PR:Q10171"}


id: PBO:0113510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type I membrane protein involved in autophagy and the Cvt pathway; targeted to vacuole via AP-3 pathway","termid":"PBO:0113510"}


id: GO:1904727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of replicative senescence.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:BHF","GOC:BHF_miRNA","PMID:23496142","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of replicative senescence","termid":"GO:1904726"},{"relation_name":"negatively_regulates","term_name":"replicative senescence","termid":"GO:0090399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of replicative senescence","synonyms":[{"name":"down regulation of replicative senescence","type":"exact"},{"name":"down-regulation of replicative senescence","type":"exact"},{"name":"downregulation of replicative senescence","type":"exact"},{"name":"inhibition of replicative senescence","type":"narrow"}],"termid":"GO:1904727"}


id: GO:1900796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of terrequinone A.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:17291795","PMID:17704773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid biosynthetic process","termid":"GO:0009821"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"},{"relation_name":"is_a","term_name":"quinone biosynthetic process","termid":"GO:1901663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"terrequinone A biosynthetic process","secondary_identifiers":["GO:1900794"],"synonyms":[{"name":"terrequinone A anabolism","type":"exact"},{"name":"terrequinone A biosynthesis","type":"exact"},{"name":"terrequinone A formation","type":"exact"},{"name":"terrequinone A metabolic process","type":"broad"},{"name":"terrequinone A metabolism","type":"broad"},{"name":"terrequinone A synthesis","type":"exact"}],"termid":"GO:1900796"}


id: GO:0140934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A deubiquitinase that cleaves ubiquitin from a histone protein to which it is conjugated.","definition_xrefs":["PMID:18206972","PMID:18226187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deubiquitinase activity","termid":"GO:0101005"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0140096","GO:0008233","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"histone deubiquitinase activity","synonyms":[{"name":"histone deubiquitination","type":"related"}],"termid":"GO:0140934"}


id: PR:Q9USU3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fbh1 gene.","definition_xrefs":["UniProtKB:Q9USU3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box DNA helicase protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.01","synonyms":[{"name":"Spom972h-fbh1","type":"exact"}],"termid":"PR:Q9USU3"}


id: GO:0072152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a glomerular mesangial cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesangial cell fate commitment","termid":"GO:0072151"},{"relation_name":"part_of","term_name":"glomerular mesangial cell differentiation","termid":"GO:0072008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular mesangial cell fate commitment","termid":"GO:0072152"}


id: PBO:0086474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial protein of unknown function; identified by expression profiling and mass spectrometry","termid":"PBO:0086474"}


id: PBO:0057834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3150B host gene","termid":"PBO:0057834"}


id: FYPO:0007224
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin assembly is decreased in centromere outer repeat regions. Heterochromatin assembly is the assembly of chromatin into a compact and highly condensed form that is often, but not always, transcriptionally silent.","definition_xrefs":["PomBase:mah","GO:0031507","PMID:31822915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin assembly at centromere outer repeat during vegetative growth","termid":"FYPO:0003098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"decreased heterochromatin assembly at centromere outer repeat during vegetative growth","synonyms":[{"name":"decreased establishment of heterochromatin at centromere outer repeat","type":"exact"},{"name":"decreased heterochromatin assembly at centromere outer repeat at centromere otr during vegetative growth","type":"exact"},{"name":"decreased heterochromatin assembly at centromere outer repeat at centromeric outer repeat during vegetative growth","type":"exact"},{"name":"decreased heterochromatin assembly at centromere outer repeat at pericentric region during vegetative growth","type":"related"},{"name":"decreased heterochromatin assembly at centromere outer repeat at pericentromeric region during vegetative growth","type":"related"},{"name":"decreased heterochromatin assembly at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased heterochromatin formation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"reduced heterochromatin assembly at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0007224"}


id: PBO:0031804
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_cycle_arrest_at_mitotic_G1/S_phase_transition","termid":"PBO:0031804"}


id: GO:1903369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of foraging behavior.","definition_xrefs":["GO_REF:0000058","PMID:8677262","GOC:TermGenie","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of behavior","termid":"GO:0048521"},{"relation_name":"is_a","term_name":"regulation of foraging behavior","termid":"GO:1903368"},{"relation_name":"negatively_regulates","term_name":"foraging behavior","termid":"GO:0060756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of foraging behavior","synonyms":[{"name":"down regulation of foraging behavior","type":"exact"},{"name":"down-regulation of foraging behavior","type":"exact"},{"name":"downregulation of foraging behavior","type":"exact"},{"name":"inhibition of foraging behavior","type":"narrow"}],"termid":"GO:1903369"}


id: GO:0034706
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ion channel complex through which sodium ions pass.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation channel complex","termid":"GO:0034703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"sodium channel complex","termid":"GO:0034706"}


id: PBO:0065312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 35","termid":"PBO:0065312"}


id: GO:0141197
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E)-4-hydroxy-3-methylbut-2-enyl diphosphate + 2 H+ + H2O + oxidized [flavodoxin] = 2-C-methyl-D-erythritol 2,4-cyclic diphosphate + reduced [flavodoxin].","definition_xrefs":["RHEA:43604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor","termid":"GO:0052592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-hydroxy-3-methylbut-2-enyl-diphosphate synthase activity (flavodoxin)","secondary_identifiers":["KEGG_REACTION:R10859","EC:1.17.7.3","MetaCyc:RXN-15878"],"synonyms":[{"name":"(E)-4-hydroxy-3-methylbut-2-enyl diphosphate synthase activity","type":"broad"},{"name":"4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity","type":"broad"}],"termid":"GO:0141197"}


id: MOD:00423
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one sodium atom for one hydrogen atom.","definition_xrefs":["Unimod:30","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium containing modified residue","termid":"MOD:00747"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monosodium salt","synonyms":[{"name":"Cation:Na","type":"related"},{"name":"Na1Res","type":"exact"},{"name":"Sodium","type":"exact"},{"name":"Sodium adduct","type":"related"}],"termid":"MOD:00423"}


id: PATO:0002195
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality which inheres in a molecular entity by virtue of the molecular entity possessing more protons overall than electrons, thus having an overall positive charge.","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electric charge","termid":"PATO:0002193"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"positive charge","termid":"PATO:0002195"}


id: PBO:0060619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCF4 antisense RNA 1","termid":"PBO:0060619"}


id: GO:0097435
data:
  {"annotated_genes":["SJAG_01388","SJAG_01894","SJAG_03088","SJAG_00677","SJAG_04100","SJAG_03380","SJAG_02245","SJAG_04982","SJAG_01268","SJAG_07018","SJAG_00279","SJAG_03455","SJAG_02566","SJAG_01993","SJAG_02700","SJAG_03540","SJAG_03835","SJAG_04621","SJAG_04312","SJAG_04522","SJAG_00918","SJAG_01964","SJAG_02609","SJAG_02624","SJAG_04172","SJAG_02695","SJAG_02737","SJAG_02075","SJAG_04624","SJAG_02228","SJAG_03011","SJAG_00856","SJAG_02864","SJAG_01224","SJAG_03025","SJAG_04841","SJAG_04003","SJAG_02286","SJAG_01384","SJAG_04479","SJAG_01756","SJAG_02040","SJAG_00938","SJAG_00521","SJAG_01613","SJAG_00970","SJAG_02336","SJAG_01215","SJAG_00723","SJAG_01732","SJAG_04703","SJAG_04074","SJAG_03086","SJAG_04498","SJAG_02509","SJAG_02886","SJAG_02761","SJAG_03052","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051764"},{"annotations":[84228,94901,95751,86742,93988,99388,95929,101224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090135"},{"annotations":[85402,101206,114729,97788,89890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051017"},{"annotations":[95716,112267,114730,104205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061572"},{"annotations":[112268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061573"},{"annotations":[88596,96992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030042"},{"annotations":[101207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051639"},{"annotations":[101632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007015"},{"annotations":[94902,89891,88380,64160,93791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030041"},{"annotations":[85444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045010"},{"annotations":[94100,85403,94360,104206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071520"},{"annotations":[103230,93989,86743,95930,98815,101225,84229,94903,99389,95752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034314"},{"annotations":[93359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060172"},{"annotations":[113032],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0030954"},{"annotations":[96449,102506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030953"},{"annotations":[110400,84335,94963,88381],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[103572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043622"},{"annotations":[96451,105677,106655,98398,108207,93049,84666,96150,103494,114752,95286,104919,83838,98523,113276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031122"},{"annotations":[104207,112269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070649"},{"annotations":[101210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110009"},{"annotations":[94691,99976,104326,85696,114226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007019"},{"annotations":[105679,106657,104921],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007020"},{"annotations":[113037,102508,97057,96453,96152,113279],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051415"},{"annotations":[114755,97058],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051417"},{"annotations":[114227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046785"},{"annotations":[94102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903479"},{"annotations":[86941],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0034316"},{"annotations":[99984,104335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070462"},{"annotations":[97922],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0031117"},{"annotations":[103685],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032231"},{"annotations":[97821,98817,101228,85904,86745],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0030833"},{"annotations":[93794,110403],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a supramolecular fiber, a polymer consisting of an indefinite number of protein or protein complex subunits that have polymerised to form a fiber-shaped structure.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component 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fiber organization","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0043206"],"synonyms":[{"name":"extracellular fibril organisation","type":"narrow"},{"name":"extracellular fibril organization","type":"narrow"},{"name":"extracellular fibril organization and biogenesis","type":"narrow"},{"name":"fibril organisation","type":"related"},{"name":"fibril 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id: GO:2000094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mesonephric nephron tubule epithelial cell differentiation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nephron tubule epithelial cell differentiation","termid":"GO:0072183"},{"relation_name":"is_a","term_name":"regulation of mesonephric nephron tubule epithelial cell differentiation","termid":"GO:2000093"},{"relation_name":"negatively_regulates","term_name":"mesonephric nephron tubule epithelial cell differentiation","termid":"GO:0061265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesonephric nephron tubule epithelial cell differentiation","termid":"GO:2000094"}


id: PBO:0003947
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.4.1.1","termid":"PBO:0003947"}


id: PBO:0002802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup155","termid":"PBO:0002802"}


id: GO:1903419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a cortical endoplasmic reticulum.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","PMID:25103238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell cortex","termid":"GO:0072697"},{"relation_name":"is_a","term_name":"protein localization to endoplasmic reticulum tubular network","termid":"GO:1903420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to cortical endoplasmic reticulum","synonyms":[{"name":"protein localisation in cortical endoplasmic reticulum","type":"exact"},{"name":"protein localisation to cortical endoplasmic reticulum","type":"exact"},{"name":"protein localization in cortical endoplasmic reticulum","type":"exact"},{"name":"protein localization to cortical ER","type":"exact"}],"termid":"GO:1903419"}


id: GO:0106160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of small RNA loading onto RISC.","definition_xrefs":["PMID:29775584","GOC:ha"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of small RNA loading onto RISC (obsolete GO:0106160)","termid":"GO:0106160"}


id: GO:0032244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a nucleoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound transport","termid":"GO:0032241"},{"relation_name":"is_a","term_name":"regulation of nucleoside transport","termid":"GO:0032242"},{"relation_name":"positively_regulates","term_name":"nucleoside transport","termid":"GO:0015858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of nucleoside transport","synonyms":[{"name":"activation of nucleoside transport","type":"narrow"},{"name":"stimulation of nucleoside transport","type":"narrow"},{"name":"up regulation of nucleoside transport","type":"exact"},{"name":"up-regulation of nucleoside transport","type":"exact"},{"name":"upregulation of nucleoside transport","type":"exact"}],"termid":"GO:0032244"}


id: PBO:0075669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase long chain base subunit 1 pseudogene 4","termid":"PBO:0075669"}


id: PBO:0034443
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_inositol_phosphate_phosphatase_activity","termid":"PBO:0034443"}


id: GO:0019486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-alanine into other compounds, including mevalonate semialdehyde, by transamination.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-alanine catabolic process","termid":"GO:0019484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"beta-alanine catabolic process to mevalonate semialdehyde, by transamination","secondary_identifiers":["MetaCyc:BETA-ALA-DEGRADATION-I-PWY"],"synonyms":[{"name":"beta-alanine breakdown to mevalonate semialdehyde, by transamination","type":"exact"},{"name":"beta-alanine degradation to mevalonate semialdehyde, by transamination","type":"exact"}],"termid":"GO:0019486"}


id: GO:2000625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of miRNA catabolic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of miRNA metabolic process","termid":"GO:2000628"},{"relation_name":"regulates","term_name":"miRNA catabolic process","termid":"GO:0010587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of miRNA catabolic process","synonyms":[{"name":"regulation of microRNA catabolic process","type":"exact"}],"termid":"GO:2000625"}


id: GO:0045623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of T-helper cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043371"},{"relation_name":"is_a","term_name":"regulation of T-helper cell differentiation","termid":"GO:0045622"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"T-helper cell differentiation","termid":"GO:0042093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of T-helper cell differentiation","synonyms":[{"name":"down regulation of T-helper cell differentiation","type":"exact"},{"name":"down-regulation of T-helper cell differentiation","type":"exact"},{"name":"downregulation of T-helper cell differentiation","type":"exact"},{"name":"inhibition of T-helper cell differentiation","type":"narrow"},{"name":"negative regulation of T-helper cell development","type":"related"}],"termid":"GO:0045623"}


id: PBO:0003849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine synthase (predicted)","termid":"PBO:0003849"}


id: PBO:0002688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sim4 and Mal2 associated (4 and 2 associated) protein 6","termid":"PBO:0002688"}


id: PBO:0059568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1L, pseudogene","termid":"PBO:0059568"}


id: PBO:0001484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argonaute binding protein 2","termid":"PBO:0001484"}


id: GO:2001087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a sophoroseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transport","termid":"GO:0015766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"sophorose transport","termid":"GO:2001087"}


id: PBO:0055808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidylcholine acyltransferase 3","termid":"PBO:0055808"}


id: GO:0042208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of propylene, an alkene produced by catalytic or thermal cracking of hydrocarbons or as a by-product of petroleum refining.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propylene metabolic process","termid":"GO:0018964"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"alkene catabolic process","termid":"GO:0043451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"propylene catabolic process","secondary_identifiers":["UM-BBD_pathwayID:pro"],"synonyms":[{"name":"propylene breakdown","type":"exact"},{"name":"propylene catabolism","type":"exact"},{"name":"propylene degradation","type":"exact"}],"termid":"GO:0042208"}


id: GO:2001191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gamma-delta T cell activation involved in immune response.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell activation","termid":"GO:0046643"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"gamma-delta T cell activation involved in immune response","termid":"GO:0002290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gamma-delta T cell activation involved in immune response","synonyms":[{"name":"regulation of gamma-delta T cell activation during immune response","type":"related"},{"name":"regulation of gamma-delta T lymphocyte activation during immune response","type":"related"},{"name":"regulation of gamma-delta T-cell activation during immune response","type":"related"},{"name":"regulation of gamma-delta T-lymphocyte activation during immune response","type":"related"}],"termid":"GO:2001191"}


id: PBO:0053886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1166","termid":"PBO:0053886"}


id: GO:0060842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized endothelial cell acquires specialized features of an arterial endothelial cell, a thin flattened cell that lines the inside surfaces of arteries.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel endothelial cell differentiation","termid":"GO:0060837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"arterial endothelial cell differentiation","termid":"GO:0060842"}


id: PBO:0064680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 16","termid":"PBO:0064680"}


id: GO:0001539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell motility due to movement of eukaryotic cilia or bacterial-type flagella or archaeal-type flagella.","definition_xrefs":["GOC:cilia","GOC:hjd","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cilium or flagellum-dependent cell motility","synonyms":[{"name":"ciliary or bacterial-type flagellar motility","type":"related"},{"name":"ciliary/flagellar motility","type":"exact"}],"termid":"GO:0001539"}


id: GO:1901697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of olivetolic acid.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"olivetolic acid biosynthetic process","synonyms":[{"name":"olivetolic acid anabolism","type":"exact"},{"name":"olivetolic acid biosynthesis","type":"exact"},{"name":"olivetolic acid formation","type":"exact"},{"name":"olivetolic acid synthesis","type":"exact"}],"termid":"GO:1901697"}


id: GO:0038170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by somatostatin binding to a somatostatin receptor (SSTR), and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","PMID:18006219","GOC:bf","GOC:nhn","Wikipedia:Somatostatin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"is_a","term_name":"somatostatin receptor signaling pathway","termid":"GO:0038169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"somatostatin signaling pathway","synonyms":[{"name":"SRIF signaling pathway","type":"exact"},{"name":"SST signaling pathway","type":"exact"},{"name":"somatostatin signalling pathway","type":"exact"},{"name":"somatostatin-activated somatostatin receptor signaling pathway","type":"exact"},{"name":"somatostatin-mediated signaling pathway","type":"exact"},{"name":"somatotrophin release inhibiting factor signaling pathway","type":"exact"}],"termid":"GO:0038170"}


id: SO:0001538
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which alters the functioning of a transcript with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_abnormal","termid":"SO:0002218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_function_variant","synonyms":[{"name":"transcript function variant","type":"exact"}],"termid":"SO:0001538"}


id: PBO:0038721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 16","termid":"PBO:0038721"}


id: PBO:0063232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 18","termid":"PBO:0063232"}


id: PBO:0016952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA Meu16","termid":"PBO:0016952"}


id: PBO:0078881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily V member 4","termid":"PBO:0078881"}


id: PBO:0053182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte receptor cluster member 1","termid":"PBO:0053182"}


id: GO:0015149
data:
  {"annotated_genes":["SJAG_00057","SJAG_03820","SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99062],"is_not":false,"summary":null,"term":"GO:0015149"},{"annotations":[106726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005354"},{"annotations":[110258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140108"},{"annotations":[113301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a hexose sugar, a monosaccharide with 6 carbon atoms, from one side of a membrane to the other.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide transmembrane transporter activity","termid":"GO:0015145"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_03608":null,"SJAG_03820":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"hexose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-189242","Reactome:R-HSA-5638222"],"termid":"GO:0015149","terms_by_termid":{"GO:0005354":null,"GO:0005358":null,"GO:0015149":null,"GO:0140108":null}}


id: GO:0002093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that alters the size or shape of an auditory receptor cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"cell morphogenesis involved in neuron differentiation","termid":"GO:0048667"},{"relation_name":"part_of","term_name":"inner ear morphogenesis","termid":"GO:0042472"},{"relation_name":"part_of","term_name":"auditory receptor cell development","termid":"GO:0060117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auditory receptor cell morphogenesis","synonyms":[{"name":"hair cell morphogenesis","type":"broad"}],"termid":"GO:0002093"}


id: GO:0045495
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Differentiated cytoplasm associated with a pole (animal, vegetal, anterior, or posterior) of an oocyte, egg or early embryo.","definition_xrefs":["GOC:kmv","PMID:17113380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"pole plasm","synonyms":[{"name":"germ plasm","type":"narrow"},{"name":"polar plasm","type":"exact"}],"termid":"GO:0045495"}


id: PBO:0050675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 2","termid":"PBO:0050675"}


id: PBO:0067326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 417, pseudogene","termid":"PBO:0067326"}


id: FYPO:0002160
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing cilofungin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal growth on echinocandin","termid":"FYPO:0004892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0000003","FYPO:0000139","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on cilofungin","synonyms":[{"name":"normal cell population growth in presence of cilofungin","type":"exact"},{"name":"normal cell population growth on cilofungin","type":"exact"},{"name":"normal cellular response to cilofungin","type":"related"},{"name":"normal vegetative cell population growth on cilofungin","type":"exact"}],"termid":"FYPO:0002160"}


id: PBO:0058747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6871","termid":"PBO:0058747"}


id: PR:000050494
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe) that has been phosphorylated at either position 2, 5, or 7 of one or more C-terminal heptad repeats (YSPTSPS).","definition_xrefs":["PomBase:VW","PMID:28367989","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe)","termid":"PR:000044736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rpb1/Phos(CTD-S2,S5,S7)","pombase_gene_id":"SPBC28F2.12","synonyms":[{"name":"PomBase_original_PRO_term_name: DNA-directed RNA polymerase II subunit rpb1 CTD-phosphorylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rpb1/Phos:CTD","type":"exact"},{"name":"rpb1/Phos(CTD-S2,S5,S7)","type":"exact"}],"termid":"PR:000050494"}


id: GO:0071362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ether stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to ether","termid":"GO:0071362"}


id: PBO:0082348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase of the DEAD-box protein family; accelerates eIF4F-dependent assembly of 48S translation preinitiation complex (PIC), stimulating recruitment of mRNAs with long, structured 5'-UTRs; cooperates with DEAD-box RNA helicase and paralog Ded1p, stimulating PIC attachment and highly processive scanning by the 40S ribosomal subunit; protein abundance increases in response to DNA replication stress","termid":"PBO:0082348"}


id: PR:000044503
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitosis inducer protein kinase cdr2 (Schizosaccharomyces pombe) that has been phosphorylated on a Ser residue within the C-terminal self-inhibitory tail. Example: UniProtKB:P87050-1, Ser-755, MOD:00046.","definition_xrefs":["PMID:24316795","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitosis inducer protein kinase cdr2 (Schizosaccharomyces pombe)","termid":"PR:000030008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitosis inducer protein kinase cdr2 phosphorylated 1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC57A10.02","synonyms":[{"name":"cdr2 phosphorylated","type":"related"}],"termid":"PR:000044503"}


id: SO:0001799
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The heterochromatic outer repeat region of a modular centromere. These repeats exist in tandem arrays on both chromosome arms.","definition_xrefs":["SO:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"centromeric_repeat","termid":"SO:0001797"},{"relation_name":"part_of","term_name":"regional_centromere","termid":"SO:0001795"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regional_centromere_outer_repeat_region","synonyms":[{"name":"regional centromere outer repeat region","type":"exact"}],"termid":"SO:0001799"}


id: PATO:0001322
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angle which is 180 degrees to another entity.","definition_xrefs":["thesaurus.maths:thesaurus.maths"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angle","termid":"PATO:0002326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"straight angle to","termid":"PATO:0001322"}


id: GO:0052622
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: delta(2)-isopentenyl diphosphate + ATP = diphosphate + N6-(delta(2)-isopentenyl)adenosine 5'-triphosphate.","definition_xrefs":["EC:2.5.1.112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0016740","GO:0016765","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ATP/ADP dimethylallyltransferase activity","synonyms":[{"name":"2-isopentenyl-diphosphate:ADP 2-isopentenyltransferase activity","type":"narrow"},{"name":"2-isopentenyl-diphosphate:ADP delta2-isopentenyltransferase activity","type":"narrow"},{"name":"2-isopentenyl-diphosphate:ATP 2-isopentenyltransferase activity","type":"narrow"},{"name":"2-isopentenyl-diphosphate:ATP delta2-isopentenyltransferase activity","type":"narrow"},{"name":"ADP dimethylallyltransferase activity","type":"narrow"},{"name":"ADP isopentenyltransferase activity","type":"narrow"},{"name":"ADP/ATP dimethylallyltransferase activity","type":"exact"},{"name":"ATP dimethylallyltransferase activity","type":"narrow"},{"name":"ATP isopentenyltransferase activity","type":"narrow"},{"name":"adenylate dimethylallyltransferase (ADP/ATP-dependent) activity","type":"exact"},{"name":"adenylate dimethylallyltransferase (ATP/ADP-dependent) activity","type":"exact"},{"name":"adenylate isopentenyltransferase activity","type":"broad"},{"name":"cytokinin synthase activity","type":"broad"},{"name":"dimethylallyl-diphosphate:ADP dimethylallyltransferase activity","type":"narrow"},{"name":"dimethylallyl-diphosphate:ATP dimethylallyltransferase activity","type":"narrow"}],"termid":"GO:0052622"}


id: PBO:0026934
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_duration_of_horsetail_movement","termid":"PBO:0026934"}


id: PBO:0046758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EXOG pseudogene 1","termid":"PBO:0046758"}


id: PBO:0074028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 16","termid":"PBO:0074028"}


id: MOD:01374
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A modification that effectively oxygenates C5 of an L-leucine residue to form a (2S,4R)-5-oxoleucine.","definition_xrefs":["RESID:AA0444","ChEBI:43739","PubMed:16858410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon oxygenated residue","termid":"MOD:00679"},{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,4R)-5-oxoleucine","synonyms":[{"name":"(2S,4R)-2-amino-4-methyl-5-oxopentanoic acid","type":"exact"},{"name":"(2S,4R)-5-oxoleucine","type":"exact"},{"name":"(4R)-5-oxo-L-leucine","type":"exact"}],"termid":"MOD:01374"}


id: GO:0051987
data:
  {"annotated_genes":["SJAG_01837","SJAG_03048","SJAG_04140","SJAG_03126","SJAG_00082","SJAG_04280","SJAG_05290","SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108038,112093,101240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902425"},{"annotations":[107279,112772,86074,89873,98458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the attachment of spindle microtubules to the kinetochore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chromosome segregation","termid":"GO:0051984"},{"relation_name":"is_a","term_name":"regulation of attachment of spindle microtubules to kinetochore","termid":"GO:0051988"},{"relation_name":"positively_regulates","term_name":"attachment of spindle microtubules to kinetochore","termid":"GO:0008608"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of attachment of spindle microtubules to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of attachment of spindle microtubules to kinetochore","type":"narrow"},{"name":"stimulation of attachment of spindle microtubules to kinetochore","type":"narrow"},{"name":"up regulation of attachment of spindle microtubules to kinetochore","type":"exact"},{"name":"up-regulation of attachment of spindle microtubules to kinetochore","type":"exact"},{"name":"upregulation of attachment of spindle microtubules to kinetochore","type":"exact"}],"termid":"GO:0051987","terms_by_termid":{"GO:0140429":null,"GO:1902425":null}}


id: PBO:0040221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATCAY kinesin light chain interacting caytaxin","termid":"PBO:0040221"}


id: GO:0047633
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: agmatine + ATP = N(4)-phosphoagmatine + ADP + 3 H+.","definition_xrefs":["EC:2.7.3.10","RHEA:15953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, nitrogenous group as acceptor","termid":"GO:0016775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"agmatine kinase activity","secondary_identifiers":["KEGG_REACTION:R01417","MetaCyc:AGMATINE-KINASE-RXN"],"synonyms":[{"name":"ATP:agmatine 4-N-phosphotransferase activity","type":"related"},{"name":"ATP:agmatine N4-phosphotransferase activity","type":"related"},{"name":"phosphagen phosphokinase activity","type":"related"}],"termid":"GO:0047633"}


id: PBO:0049113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 176","termid":"PBO:0049113"}


id: PBO:0085034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Noncatalytic subunit of a tRNA methyltransferase complex; Trm8p and Trm82p comprise an enzyme that catalyzes a methyl-transfer from S-adenosyl-l-methionine to the N(7) atom of guanine at position 46 in tRNA; Trm8 lacks catalytic activity if not bound to Trm82p; relocalizes to the cytosol in response to hypoxia; mutation in human ortholog WDR4 causes microcephalic primordial dwarfism","termid":"PBO:0085034"}


id: PBO:0004523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-6-phosphate isomerase (predicted)","termid":"PBO:0004523"}


id: PBO:0003721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp11","termid":"PBO:0003721"}


id: PBO:0002673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing associated factor Saf3","termid":"PBO:0002673"}


id: FYPO:0008275
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a polyphosphatase activity is normal (i.e. indistinguishable from wild type).","direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal polyphosphatase activity","termid":"FYPO:0008275"}


id: GO:0141033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host actin cytoskeleton by polymerizing the host filamentous actin. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:25293534","PMID:18331467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host actin cytoskeleton","termid":"GO:0141027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host actin cytoskeleton via actin polymerization","synonyms":[{"name":"perturbation by symbiont of host actin cytoskeleton via actin polymerization","type":"exact"}],"termid":"GO:0141033"}


id: PBO:0081369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 207","termid":"PBO:0081369"}


id: MOD:01907
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methioninium (protonated L-methionine) residue to dehydromethionine.","definition_xrefs":["PubMed:19775156","PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"protonated L-methionine (L-methioninium) residue","termid":"MOD:01464"},{"relation_name":"is_a","term_name":"cyclized residue","termid":"MOD:00601"},{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydromethionine (from L-methioninium)","synonyms":[{"name":"(3S)-3-carboxy-1-methylisothiazolidin-1-ium","type":"exact"},{"name":"L-dehydromethionine","type":"exact"}],"termid":"MOD:01907"}


id: GO:0045803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the organization, biogenesis or maintenance of the cytoskeleton.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cytoskeleton (obsolete GO:0045803)","synonyms":[{"name":"positive regulation of cytoskeleton","type":"exact"}],"termid":"GO:0045803"}


id: FYPO:0006983
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the termination of RNA transcription RNA polymerase III from a DNA template is abnormal.","definition_xrefs":["PomBase:mah","GO:0006386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription termination","termid":"FYPO:0003556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000294","FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"abnormal termination of RNA polymerase III transcription","synonyms":[{"name":"abnormal RNA polymerase III transcription termination","type":"exact"},{"name":"abnormal termination of RNA polymerase III transcription during mitotic cell cycle","type":"related"},{"name":"abnormal termination of RNA polymerase III transcription during vegetative growth","type":"exact"},{"name":"abnormal transcription termination from Pol III promoter","type":"exact"},{"name":"abnormal transcription termination from RNA polymerase III promoter","type":"exact"}],"termid":"FYPO:0006983"}


id: PBO:0084539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the p24 family involved in ER to Golgi transport; role in misfolded protein quality control; forms heterotrimeric complex with Erp2p, Emp24p, and Erv25p; localized to COPII-coated vesicles; ERP1 has a paralog, ERP6, that arose from the whole genome duplication","termid":"PBO:0084539"}


id: PBO:0051947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-trisphosphate 3-kinase A","termid":"PBO:0051947"}


id: GO:0003989
data:
  {"annotated_genes":["SJAG_03313"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94431],"is_not":false,"summary":null,"term":"GO:0003989"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + acetyl-CoA + HCO3- = ADP + phosphate + malonyl-CoA.","definition_xrefs":["EC:6.4.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA carboxylase activity","termid":"GO:0016421"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acetyl-CoA carboxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:ACETYL-COA-CARBOXYLTRANSFER-RXN","RHEA:11308","Reactome:R-HSA-8876889","Reactome:R-HSA-200555","Reactome:R-HSA-75851"],"synonyms":[{"name":"acetyl coenzyme A carboxylase activity","type":"related"},{"name":"acetyl-CoA:carbon-dioxide ligase (ADP-forming)","type":"related"}],"termid":"GO:0003989","terms_by_termid":{"GO:0003989":null}}


id: GO:0046305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of alkanesulfonates, the anion of alkanesulfonic acids, sulfonic acid derivatives containing an aliphatic hydrocarbon group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid biosynthetic process","termid":"GO:0016053"},{"relation_name":"is_a","term_name":"alkanesulfonate metabolic process","termid":"GO:0019694"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"alkanesulfonate biosynthetic process","synonyms":[{"name":"alkanesulfonate anabolism","type":"exact"},{"name":"alkanesulfonate biosynthesis","type":"exact"},{"name":"alkanesulfonate formation","type":"exact"},{"name":"alkanesulfonate synthesis","type":"exact"},{"name":"alkanesulphonate biosynthesis","type":"exact"},{"name":"alkanesulphonate biosynthetic process","type":"exact"}],"termid":"GO:0046305"}


id: PBO:0081395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 234","termid":"PBO:0081395"}


id: PBO:0031373
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondrial_nucleoid_enlarged","termid":"PBO:0031373"}


id: PBO:0077144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidine kinase 1","termid":"PBO:0077144"}


id: GO:0005937
data:
  {"annotated_genes":["SJAG_00514","SJAG_00663","SJAG_01171","SJAG_04470","SJAG_02924","SJAG_04509","SJAG_01215","SJAG_03145","SJAG_03596","SJAG_00667","SJAG_00185","SJAG_04887","SJAG_01769","SJAG_05285","SJAG_01017","SJAG_02989","SJAG_03688","SJAG_00938","SJAG_02169","SJAG_03444","SJAG_03646","SJAG_02222","SJAG_01943","SJAG_04100","SJAG_04781","SJAG_02351","SJAG_00677","SJAG_02486","SJAG_05001","SJAG_04001","SJAG_04901","SJAG_01732","SJAG_01978","SJAG_02228","SJAG_04723","SJAG_00870","SJAG_03357","SJAG_03011","SJAG_02379","SJAG_02718","SJAG_01888","SJAG_03453","SJAG_01794","SJAG_04982","SJAG_04703","SJAG_02700","SJAG_00700","SJAG_01993"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88564,107440],"is_not":false,"summary":null,"term":"GO:0005937"},{"annotations":[89888,84356,112262,91435,95614,104198,86906,85166,115392,110700,90087,104137,107390,98015,88565,96212,98014,91354],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990819"},{"annotations":[95043,84215],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070250"},{"annotations":[96176,102067,112049,90568],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032175"},{"annotations":[114724,92440,86739,102921,92937,83965,99325,103227,91436,102951,89537,93985,85935,91355,97267,104912,105127,106265,107944,93788,85167,88636,88566,102160,86784,94959,110399,111895],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043332"},{"annotations":[106266,92441],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070867"}]},"cv_name":"cellular_component","definition":"The projection formed by unicellular fungi in response to mating pheromone.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":48,"genes_by_uniquename":{"SJAG_00185":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_00667":null,"SJAG_00677":null,"SJAG_00700":null,"SJAG_00870":null,"SJAG_00938":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01215":null,"SJAG_01732":null,"SJAG_01769":null,"SJAG_01794":null,"SJAG_01888":null,"SJAG_01943":null,"SJAG_01978":null,"SJAG_01993":null,"SJAG_02169":null,"SJAG_02222":null,"SJAG_02228":null,"SJAG_02351":null,"SJAG_02379":null,"SJAG_02486":null,"SJAG_02700":null,"SJAG_02718":null,"SJAG_02924":null,"SJAG_02989":null,"SJAG_03011":null,"SJAG_03145":null,"SJAG_03357":null,"SJAG_03444":null,"SJAG_03453":null,"SJAG_03596":null,"SJAG_03646":null,"SJAG_03688":null,"SJAG_04001":null,"SJAG_04100":null,"SJAG_04470":null,"SJAG_04509":null,"SJAG_04703":null,"SJAG_04723":null,"SJAG_04781":null,"SJAG_04887":null,"SJAG_04901":null,"SJAG_04982":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"mating projection","references_by_uniquename":{"GO_REF:0000107":null,"PMID:36148799":null},"synonyms":[{"name":"conjugation tube","type":"narrow"},{"name":"shmoo","type":"narrow"}],"termid":"GO:0005937","terms_by_termid":{"GO:0005937":null,"GO:0032175":null,"GO:0043332":null,"GO:0070250":null,"GO:0070867":null,"GO:1990819":null}}


id: PBO:0005302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol kinase Sec59 (predicted)","termid":"PBO:0005302"}


id: PR:Q9UT05
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tripeptidyl-peptidase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02216","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripeptidyl-peptidase 2 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP8A3.12c","secondary_identifiers":["UniProtKB:Q9UT05"],"synonyms":[{"name":"Spom972h-TPP2","type":"exact"},{"name":"TPP-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"multicorn protease (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT05"}


id: PBO:0052918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 19-1","termid":"PBO:0052918"}


id: PR:P87118
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An inorganic pyrophosphatase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic pyrophosphatase C3A12.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.02","secondary_identifiers":["UniProtKB:P87118"],"synonyms":[{"name":"PPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPA1","type":"exact"},{"name":"pyrophosphate phosphohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87118"}


id: RO:0001001
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between two distinct material entities, the old entity and the new entity, in which the new entity begins to exist when the old entity ceases to exist, and the new entity inherits the significant portion of the matter of the old entity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"derives_into","termid":"RO:0001001"}


id: PBO:0027580
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_multiseptate_vegetative_cell_with_fragmented_DNA","termid":"PBO:0027580"}


id: PBO:0064995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 2","termid":"PBO:0064995"}


id: PBO:0029270
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromatin_binding","termid":"PBO:0029270"}


id: PR:Q9P7E7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- adg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7E7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein adg1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPJ760.03c","synonyms":[{"name":"Spom972h-adg1","type":"exact"}],"termid":"PR:Q9P7E7"}


id: PBO:0088198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc knuckle protein; involved in nuclear RNA processing and degradation as a component of the TRAMP complex; stimulates the poly(A) polymerase activity of Pap2p in vitro; AIR1 has a paralog, AIR2, that arose from the whole genome duplication; although Air1p and Air2p are homologous TRAMP subunits, they have nonredundant roles in regulation of substrate specificity of the exosome","termid":"PBO:0088198"}


id: GO:0045651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macrophage differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte differentiation","termid":"GO:0002763"},{"relation_name":"is_a","term_name":"regulation of macrophage differentiation","termid":"GO:0045649"},{"relation_name":"positively_regulates","term_name":"macrophage differentiation","termid":"GO:0030225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage differentiation","synonyms":[{"name":"activation of macrophage differentiation","type":"narrow"},{"name":"stimulation of macrophage differentiation","type":"narrow"},{"name":"up regulation of macrophage differentiation","type":"exact"},{"name":"up-regulation of macrophage differentiation","type":"exact"},{"name":"upregulation of macrophage differentiation","type":"exact"}],"termid":"GO:0045651"}


id: PBO:0013105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA processing factor","termid":"PBO:0013105"}


id: GO:0002497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydrolysis of a peptide bond or bonds within a protein by the proteasome complex contributing to antigen processing and presentation.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:15771591","PMID:15224092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis associated with antigen processing and presentation","termid":"GO:0002496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"proteasomal proteolysis associated with antigen processing and presentation","termid":"GO:0002497"}


id: GO:0051762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sesquiterpenes, any of a class of terpenes of the formula C15H24 or a derivative of such a terpene.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene biosynthetic process","termid":"GO:0046246"},{"relation_name":"is_a","term_name":"sesquiterpene metabolic process","termid":"GO:0051761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sesquiterpene biosynthetic process","termid":"GO:0051762"}


id: PBO:0083996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), isozyme 1; involved in glycolysis and gluconeogenesis; tetramer that catalyzes the reaction of glyceraldehyde-3-phosphate to 1,3 bis-phosphoglycerate; detected in the cytoplasm and cell wall; protein abundance increases in response to DNA replication stress; GAPDH-derived antimicrobial peptides secreted by S. cerevisiae are active against a wide variety of wine-related yeasts and bateria","termid":"PBO:0083996"}


id: PBO:0049831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haloacid dehalogenase like hydrolase domain containing 2","termid":"PBO:0049831"}


id: GO:2000601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Arp2/3 complex-mediated actin nucleation.","definition_xrefs":["PMID:21454476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Arp2/3 complex-mediated actin nucleation","termid":"GO:0034315"},{"relation_name":"is_a","term_name":"positive regulation of actin nucleation","termid":"GO:0051127"},{"relation_name":"positively_regulates","term_name":"Arp2/3 complex-mediated actin nucleation","termid":"GO:0034314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"positive regulation of Arp2/3 complex-mediated actin nucleation","synonyms":[{"name":"positive regulation of actin filament branch nucleation","type":"exact"},{"name":"positive regulation of branched actin filament nucleation","type":"exact"}],"termid":"GO:2000601"}


id: PBO:0055454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2886","termid":"PBO:0055454"}


id: PBO:0089636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rrp14","termid":"PBO:0089636"}


id: GO:0102869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + 6-hydroxyflavone = 6-O-beta-D-glucosyl-6-hydroxyflavone + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-hydroxyflavone-glucosyltransferase activity (obsolete GO:0102869)","termid":"GO:0102869"}


id: GO:1902003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amyloid-beta formation.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:17098871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of amyloid precursor protein catabolic process","termid":"GO:1902991"},{"relation_name":"regulates","term_name":"amyloid-beta formation","termid":"GO:0034205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amyloid-beta formation","synonyms":[{"name":"regulation of beta-amyloid formation","type":"exact"}],"termid":"GO:1902003"}


id: PBO:0089879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit Emc4","termid":"PBO:0089879"}


id: PATO:0015003
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A decrease in the ability of a process to produce its output.","definition_xrefs":["PATOC:PortlandMeetingFeb2015"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased process quality","termid":"PATO:0002302"},{"relation_name":"is_a","term_name":"process efficacy","termid":"PATO:0015002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased efficacy","termid":"PATO:0015003"}


id: PBO:0077454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM183A pseudogene 4","termid":"PBO:0077454"}


id: PBO:0040634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BARX homeobox 1","termid":"PBO:0040634"}


id: PBO:0001375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CK2 subfamily","termid":"PBO:0001375"}


id: PBO:0063406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCL3 pseudogene 2","termid":"PBO:0063406"}


id: PBO:0028790
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K9_methylation_at_centromere_outer_repeat","termid":"PBO:0028790"}


id: PBO:0001588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotrimeric G protein alpha-2 subunit Gpa2","termid":"PBO:0001588"}


id: PBO:0074492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snail family transcriptional repressor 3","termid":"PBO:0074492"}


id: PBO:0059442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A13","termid":"PBO:0059442"}


id: GO:0090711
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: FMN + H2O = phosphate + riboflavin.","definition_xrefs":["PMID:16183635","RHEA:35587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"FMN hydrolase activity","secondary_identifiers":["EC:3.1.3.102","MetaCyc:RXN0-5187"],"synonyms":[{"name":"FMN phosphatase","type":"exact"}],"termid":"GO:0090711"}


id: GO:0044818
data:
  {"annotated_genes":["SJAG_00364","SJAG_02098","SJAG_01076","SJAG_02563","SJAG_01010","SJAG_03160","SJAG_01680","SJAG_03942","SJAG_02576","SJAG_00640","SJAG_01146","SJAG_05373","SJAG_02074","SJAG_01605","SJAG_03026","SJAG_03695","SJAG_01429","SJAG_02771","SJAG_04671","SJAG_04287","SJAG_01873","SJAG_03927","SJAG_01044","SJAG_02266","SJAG_01205"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95424,85194,90011,95258,108111,99397,103906,112147,113192,87491,105382,90033,88586,96605,113363,112897,102677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"},{"annotations":[90013,105383,110340,102678,86283,87852,97122,95425,85195,113109,113795,96606,107808,87492,84624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"}]},"cv_name":"biological_process","definition":"A cell cycle checkpoint that detects and negatively regulates progression from G2 to M phase as part of a mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint signaling","termid":"GO:0007093"},{"relation_name":"is_a","term_name":"negative regulation of G2/M transition of mitotic cell cycle","termid":"GO:0010972"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00640":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_01873":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03160":null,"SJAG_03695":null,"SJAG_03927":null,"SJAG_03942":null,"SJAG_04287":null,"SJAG_04671":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0044772"}],"interesting_parent_ids":["GO:0023052","GO:0044772","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic G2/M transition checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044818","terms_by_termid":{"GO:0007095":null,"GO:0033314":null}}


id: PATO:0002082
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A broken quality inhering in a bearer by virtue of the bearer's being still one contiguous whole but structurally damaged such that in danger of become two or more.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"broken","termid":"PATO:0001444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partially broken","termid":"PATO:0002082"}


id: FYPO:0007372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of chlorpromazine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0002682","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"resistance to chlorpromazine","synonyms":[{"name":"resistance to chlorpromazine during mitotic cell cycle","type":"related"},{"name":"resistance to chlorpromazine during vegetative growth","type":"exact"},{"name":"resistant to chlorpromazine","type":"exact"}],"termid":"FYPO:0007372"}


id: PR:P15567
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ade6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P15567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.13","synonyms":[{"name":"AIR carboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"AIRC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ade6","type":"exact"}],"termid":"PR:P15567"}


id: PBO:0070418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated protein 3","termid":"PBO:0070418"}


id: PBO:0086944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Receptor for a factor pheromone; couples to MAP kinase cascade to mediate pheromone response; transcribed in alpha cells and required for mating by alpha cells, ligand bound receptors endocytosed and recycled to the plasma membrane; GPCR","termid":"PBO:0086944"}


id: RO:0002214
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has prototype y if and only if x is an instance of C and y is a prototypical instance of C. For example, every instance of heart, both normal and abnormal is related by the has prototype relation to some instance of a \\\"canonical\\\" heart, which participates in blood circulation.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_prototype","termid":"RO:0002214"}


id: PBO:0057561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 718","termid":"PBO:0057561"}


id: PATO:0002074
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An avidity which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"avidity","termid":"PATO:0002073"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased avidity","termid":"PATO:0002074"}


id: GO:0070063
data:
  {"annotated_genes":["SJAG_01151","SJAG_00139","SJAG_03118","SJAG_01610","SJAG_00483","SJAG_02203","SJAG_00448","SJAG_04353","SJAG_02691","SJAG_02898","SJAG_01707","SJAG_04933","SJAG_00809","SJAG_01744"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76636],"is_not":false,"summary":null,"term":"GO:0070063"},{"annotations":[66499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043175"},{"annotations":[70531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001042"},{"annotations":[64414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099122"},{"annotations":[71446,76902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"},{"annotations":[71390,75076,70131,77467,77486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000993"},{"annotations":[75353,77151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001139"},{"annotations":[72585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000994"}]},"cv_name":"molecular_function","definition":"Binding to an RNA polymerase molecule or complex.","definition_xrefs":["GOC:txnOH","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00139":null,"SJAG_00448":null,"SJAG_00483":null,"SJAG_00809":null,"SJAG_01151":null,"SJAG_01610":null,"SJAG_01707":null,"SJAG_01744":null,"SJAG_02203":null,"SJAG_02691":null,"SJAG_02898":null,"SJAG_03118":null,"SJAG_04353":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0070063","terms_by_termid":{"GO:0000993":null,"GO:0000994":null,"GO:0001042":null,"GO:0001139":null,"GO:0043175":null,"GO:0070063":null,"GO:0099122":null,"GO:1990269":null}}


id: PBO:0064015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 49","termid":"PBO:0064015"}


id: FYPO:0004427
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the dephosphorylation of the ribosomal small subunit protein S6 begins later than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:24247430","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein dephosphorylation","termid":"FYPO:0004426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"delayed onset of ribosomal S6 protein dephosphorylation during cellular response to nitrogen starvation","synonyms":[{"name":"delayed onset of dephosphorylation of ribosomal S6 during cellular response to nitrogen starvation","type":"exact"},{"name":"delayed onset of ribosomal S6 dephosphorylation during cellular response to nitrogen starvation","type":"exact"},{"name":"delayed ribosomal S6 protein dephosphorylation during cellular response to nitrogen starvation","type":"exact"}],"termid":"FYPO:0004427"}


id: GO:0005182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete lipopeptide hormone (obsolete GO:0005182)","synonyms":[{"name":"lipopeptide hormone","type":"exact"}],"termid":"GO:0005182"}


id: GO:0006589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of octopamine, 1-(p-hydroxyphenyl)-2-aminoethanol. The D enantiomer is about one-tenth as active as norepinephrine and is found in the salivary glands of Octopus and Eledone species.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biogenic amine biosynthetic process","termid":"GO:0042401"},{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"octopamine metabolic process","termid":"GO:0046333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"octopamine biosynthetic process","synonyms":[{"name":"octopamine anabolism","type":"exact"},{"name":"octopamine biosynthesis","type":"exact"},{"name":"octopamine formation","type":"exact"},{"name":"octopamine synthesis","type":"exact"}],"termid":"GO:0006589"}


id: PBO:0063080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAPPA antisense RNA 2","termid":"PBO:0063080"}


id: PBO:0051207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-38-2","termid":"PBO:0051207"}


id: GO:0061936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding and fusion of a sperm, with the plasma membrane of the oocyte as part of the process of double fertilization forming a zygote and endosperm.","definition_xrefs":["PMID:21123745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"plasma membrane fusion","termid":"GO:0045026"},{"relation_name":"part_of","term_name":"double fertilization forming a zygote and endosperm","termid":"GO:0009567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"fusion of sperm to egg plasma membrane involved in double fertilization forming a zygote and endosperm","termid":"GO:0061936"}


id: PBO:0088014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type II phosphatidylinositol 4-kinase; binds Las17p, a homolog of human Wiskott-Aldrich Syndrome protein involved in actin patch assembly and actin polymerization","termid":"PBO:0088014"}


id: MOD:01013
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetramethylguanidinium termination by-product on amine","termid":"MOD:01013"}


id: PBO:0049159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 4 pseudogene 1","termid":"PBO:0049159"}


id: PBO:0005437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATM checkpoint kinase","termid":"PBO:0005437"}


id: GO:0010131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of sucrose by the enzymatic action of either invertase or sucrose synthase.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sucrose catabolic process, using invertase or sucrose synthase (obsolete GO:0010131)","synonyms":[{"name":"sucrose breakdown, using invertase or sucrose synthase","type":"exact"},{"name":"sucrose catabolic process, using invertase or sucrose synthase","type":"exact"},{"name":"sucrose catabolism, using invertase or sucrose synthase","type":"exact"},{"name":"sucrose degradation, using invertase or sucrose synthase","type":"exact"}],"termid":"GO:0010131"}


id: PBO:0072422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 27","termid":"PBO:0072422"}


id: PR:Q9UTA4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonucleases P/MRP protein subunit POP1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR22731:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleases P/MRP protein subunit pop1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.16","secondary_identifiers":["UniProtKB:Q9UTA4"],"synonyms":[{"name":"SPAC25B8.16","type":"related"},{"name":"Spom972h-POP1","type":"exact"}],"termid":"PR:Q9UTA4"}


id: FYPO:0001803
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has more than one septum apiece during a cellular response to caffeine.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete multiseptate cell during cellular response to caffeine (obsolete FYPO:0001803)","synonyms":[{"name":"multiseptate cell during cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"multiseptate cell during cellular response to caffeine during vegetative growth","type":"exact"},{"name":"multiseptate in response to caffeine","type":"exact"}],"termid":"FYPO:0001803"}


id: SO:0000150
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence obtained from a single sequencing experiment. Typically a read is produced when a base calling program interprets information from a chromatogram trace file produced from a sequencing machine.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly_component","termid":"SO:0000143"},{"relation_name":"part_of","term_name":"contig","termid":"SO:0000149"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"read","termid":"SO:0000150"}


id: GO:0031880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 3 somatostatin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatostatin receptor binding","termid":"GO:0031877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 3 somatostatin receptor binding","synonyms":[{"name":"type 3 somatostatin receptor ligand","type":"narrow"}],"termid":"GO:0031880"}


id: GO:1904161
data:
  {"annotated_genes":["SJAG_04877","SJAG_05197","SJAG_02818","SJAG_00814"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91307,98905,100993,105179],"is_not":false,"summary":null,"term":"GO:1904161"}]},"cv_name":"biological_process","definition":"Any DNA synthesis that is involved in UV-damage excision repair.","definition_xrefs":["GO_REF:0000060","PMID:10704216","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA synthesis involved in DNA repair","termid":"GO:0000731"},{"relation_name":"part_of","term_name":"UV-damage excision repair","termid":"GO:0070914"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00814":null,"SJAG_02818":null,"SJAG_04877":null,"SJAG_05197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA synthesis involved in UV-damage excision repair","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA synthesis during UV-damage excision repair","type":"related"},{"name":"DNA synthesis during UV-damaged DNA endonuclease-dependent excision repair","type":"related"},{"name":"DNA synthesis during UVDE-dependent excision repair","type":"related"},{"name":"DNA synthesis during UVER","type":"related"},{"name":"DNA synthesis involved in AER","type":"related"},{"name":"DNA synthesis involved in UV-damaged DNA endonuclease-dependent excision repair","type":"exact"},{"name":"DNA synthesis involved in UVDE-dependent excision repair","type":"exact"},{"name":"DNA synthesis involved in UVER","type":"exact"},{"name":"DNA synthesis involved in alternative excision repair","type":"related"},{"name":"mitotic DNA repair synthesis involved in UV-damage excision repair","type":"narrow"},{"name":"mitotic DNA repair synthesis involved in UV-damaged DNA endonuclease-dependent excision repair","type":"narrow"},{"name":"mitotic DNA repair synthesis involved in UVDE-dependent excision repair","type":"narrow"},{"name":"mitotic DNA repair synthesis involved in UVER","type":"narrow"}],"termid":"GO:1904161","terms_by_termid":{"GO:1904161":null}}


id: PBO:0042918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFTR pseudogene 1","termid":"PBO:0042918"}


id: GO:0042064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cell adhesion receptor regulator activity (obsolete GO:0042064)","synonyms":[{"name":"cell adhesion receptor regulator activity","type":"exact"}],"termid":"GO:0042064"}


id: PBO:0055323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2751","termid":"PBO:0055323"}


id: PBO:0073123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC11 homolog A, signal peptidase complex subunit","termid":"PBO:0073123"}


id: PBO:0056872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICB divergent transcript","termid":"PBO:0056872"}


id: GO:0007237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of Ssk2/Ssk22 proteins (obsolete GO:0007237)","synonyms":[{"name":"activation of Ssk2/Ssk22 proteins","type":"exact"}],"termid":"GO:0007237"}


id: GO:0061311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand the binding to its receptor on the surface of a cell, which contributes to the progression of the heart over time.","definition_xrefs":["GOC:mtg_heart","GOC:dph","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"cell surface receptor signaling pathway involved in heart development","synonyms":[{"name":"cell surface receptor linked signaling pathway involved in heart development","type":"exact"},{"name":"cell surface receptor linked signalling pathway involved in heart development","type":"exact"}],"termid":"GO:0061311"}


id: PBO:0064988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein regulator of cytokinesis 1","termid":"PBO:0064988"}


id: PBO:0113146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-dependent zinc transferase; couples GTP hydrolysis to the activation of methionine aminopeptidase Map1p, especially during zinc starvation; deletion confers reduced fitness in saline; contains GTPase sequence motifs and a CxCC metal-binding motif","termid":"PBO:0113146"}


id: GO:0034092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the extent to which the association between sister chromatids of a replicated chromosome is maintained.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of maintenance of sister chromatid cohesion","termid":"GO:0034091"},{"relation_name":"is_a","term_name":"negative regulation of sister chromatid cohesion","termid":"GO:0045875"},{"relation_name":"negatively_regulates","term_name":"maintenance of sister chromatid cohesion","termid":"GO:0034086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of maintenance of sister chromatid cohesion","termid":"GO:0034092"}


id: PBO:0111788
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain","termid":"PBO:0111788"}


id: PBO:0036322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular 5'-nucleotidase, human NT5E family (predicted)","termid":"PBO:0036322"}


id: FYPO:0007918
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which RNA 3' end processing is abnormal.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000294","FYPO:0001320","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"abnormal RNA 3'-end processing","termid":"FYPO:0007918"}


id: PR:Q9P7J1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swt1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7J1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional protein swt1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.15","synonyms":[{"name":"Spom972h-swt1","type":"exact"}],"termid":"PR:Q9P7J1"}


id: PBO:0083015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defining member of the SET3 histone deacetylase complex; which is a meiosis-specific repressor of sporulation genes; necessary for efficient transcription by RNAPII; one of two yeast proteins that contains both SET and PHD domains; SET3 has a paralog, SET4, that arose from the whole genome duplication","termid":"PBO:0083015"}


id: PBO:0028912
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_abnormal_septum","termid":"PBO:0028912"}


id: PBO:0083105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase, potent G-quadruplex DNA binder/unwinder; possesses strand annealing activity; promotes DNA synthesis during break-induced replication; involved in crossover recombination; works with Hrq1p to maintain telomere length homeostasis; translation from different start sites produces mitochondrial (DNA repair and recombination) and nuclear (catalytic inhibitor of telomerase) forms; mutations affect Zn, Fe homeostasis; regulated by Rad53p-dependent phosphorylation in rho0 cells","termid":"PBO:0083105"}


id: PBO:0018148
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defective entrance Into Mitosis","termid":"PBO:0018148"}


id: PBO:0045193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB6 pseudogene 6","termid":"PBO:0045193"}


id: PBO:0069297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 553, pseudogene","termid":"PBO:0069297"}


id: PATO:0002252
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being flattened along the antero-posterior axis.","definition_xrefs":["PATOC:JC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flattened","termid":"PATO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antero-posteriorly flattened","synonyms":[{"name":"antero-posteriorly compressed","type":"exact"}],"termid":"PATO:0002252"}


id: GO:0044507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that activates or increases the frequency, rate or extent of the activity of a receptor in a second organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:8405712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of molecular function in another organism","termid":"GO:0044491"},{"relation_name":"is_a","term_name":"modulation of receptor activity in another organism","termid":"GO:0044504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of receptor activity in another organism","synonyms":[{"name":"positive regulation of receptor activity in other organism","type":"exact"}],"termid":"GO:0044507"}


id: RO:0002348
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p 'results in commitment to' c if and only if p is a developmental process and c is a cell and p results in the state of c changing such that is can only develop into a single cell type.","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_commitment_to","termid":"RO:0002348"}


id: PBO:0084515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of conserved ER transmembrane complex; required for efficient folding of proteins in the ER; null mutant displays induction of the unfolded protein response; homologous to worm F33D4.7/EMC-6, fly CG11781, human TMEM93","termid":"PBO:0084515"}


id: PATO:0000013
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000013 relative age (obsolete PATO:0000013)","termid":"PATO:0000013"}


id: PBO:0070607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 75","termid":"PBO:0070607"}


id: PBO:0034261
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-positively_regulated_by","termid":"PBO:0034261"}


id: PBO:0091270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GTPase related protein Gep3","termid":"PBO:0091270"}


id: GO:0030371
data:
  {"annotated_genes":["SJAG_02638","SJAG_01813"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108238],"is_not":false,"summary":null,"term":"GO:0030371"},{"annotations":[115007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000900"}]},"cv_name":"molecular_function","definition":"Antagonizes ribosome-mediated translation of mRNA into a polypeptide.","definition_xrefs":["GOC:clt","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation regulator activity","termid":"GO:0045182"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01813":null,"SJAG_02638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0045182"}],"interesting_parent_ids":["GO:0003674","GO:0045182"],"is_obsolete":false,"name":"translation repressor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030371","terms_by_termid":{"GO:0000900":null,"GO:0030371":null}}


id: PBO:0000805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase III complex subunit Rpc11","termid":"PBO:0000805"}


id: PBO:0004725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial thiamine pyrophosphate transporter (predicted)","termid":"PBO:0004725"}


id: GO:0071429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex that contains small nuclear RNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete snRNA-containing ribonucleoprotein complex export from nucleus (obsolete GO:0071429)","synonyms":[{"name":"snRNA-containing RNP export from nucleus","type":"exact"},{"name":"snRNA-containing ribonucleoprotein complex export from cell nucleus","type":"exact"},{"name":"snRNA-containing ribonucleoprotein complex nucleus export","type":"exact"},{"name":"snRNA-containing ribonucleoprotein complex transport from nucleus to cytoplasm","type":"exact"}],"termid":"GO:0071429"}


id: PBO:0027698
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mRNA_absent_from_cell","termid":"PBO:0027698"}


id: GO:1905927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of invadopodium disassembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:15684033"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of invadopodium disassembly (obsolete GO:1905927)","termid":"GO:1905927"}


id: FYECO:0000059
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition that specifies one or more chemical(s) that are added to, or excluded from, growth medium, assay buffer, etc.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fission yeast phenotype condition","termid":"FYECO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chemical added or excluded","secondary_identifiers":["FYECO:0000020","FYECO:0000019","FYECO:0000017"],"synonyms":[{"name":"chemical added","type":"related"},{"name":"chemicals","type":"related"}],"termid":"FYECO:0000059"}


id: GO:0008266
data:
  {"annotated_genes":["SJAG_02469","SJAG_03954","SJAG_03283","SJAG_00145","SJAG_03876","SJAG_01650","SJAG_03460","SJAG_04880","SJAG_01222","SJAG_05240","SJAG_03214","SJAG_04427","SJAG_01327","SJAG_04271"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72111,73606,85564,91233,91701,91902,93189,94586,102410,103796,106004,108970,111019,112502],"is_not":false,"summary":null,"term":"GO:0008266"}]},"cv_name":"molecular_function","definition":"Binding to a sequence of uracil residues in an RNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly-pyrimidine tract binding","termid":"GO:0008187"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_01222":null,"SJAG_01327":null,"SJAG_01650":null,"SJAG_02469":null,"SJAG_03214":null,"SJAG_03283":null,"SJAG_03460":null,"SJAG_03876":null,"SJAG_03954":null,"SJAG_04271":null,"SJAG_04427":null,"SJAG_04880":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"poly(U) RNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"poly(U) binding","type":"exact"}],"termid":"GO:0008266","terms_by_termid":{"GO:0008266":null}}


id: PBO:0025421
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Salla disease","termid":"PBO:0025421"}


id: PBO:0083688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enolase II, a phosphopyruvate hydratase; catalyzes conversion of 2-phosphoglycerate to phosphoenolpyruvate during glycolysis and the reverse reaction during gluconeogenesis; expression induced in response to glucose; ENO2 has a paralog, ENO1, that arose from the whole genome duplication","termid":"PBO:0083688"}


id: PBO:0059288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L42 pseudogene 3","termid":"PBO:0059288"}


id: PBO:0049393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein 8 (putative)","termid":"PBO:0049393"}


id: PBO:0090250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set5","termid":"PBO:0090250"}


id: PBO:0065202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRPF31 antisense RNA 1","termid":"PBO:0065202"}


id: PBO:0056676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myocyte enhancer factor 2A pseudogene 1","termid":"PBO:0056676"}


id: PATO:0001829
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual or a population by virtue of having internal reproductive organs of female and external sexual characteristics of male.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudohermaphrodite","termid":"PATO:0001827"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female pseudohermaphrodite","termid":"PATO:0001829"}


id: PBO:0078917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 6-1","termid":"PBO:0078917"}


id: PBO:0027484
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_hydrogen_peroxide-induced_proteins_during_G0","termid":"PBO:0027484"}


id: PBO:0030679
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_cell_size","termid":"PBO:0030679"}


id: GO:0010470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of gastrulation. Gastrulation is the complex and coordinated series of cellular movements that occurs at the end of cleavage during embryonic development of most animals.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"},{"relation_name":"regulates","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gastrulation","termid":"GO:0010470"}


id: PBO:0042000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 51","termid":"PBO:0042000"}


id: FYPO:0001836
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the spindle pole body is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cytoskeleton","termid":"FYPO:0004096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to spindle pole body","synonyms":[{"name":"normal protein localisation to spindle pole body","type":"exact"},{"name":"normal protein localization to SPB","type":"exact"}],"termid":"FYPO:0001836"}


id: PBO:0042329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD52 molecule","termid":"PBO:0042329"}


id: GO:0070114
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer, i.e. cytoplasm-facing, of the two lipid bilayers surrounding an organellar chromatophore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peribacteroid membrane","termid":"GO:0043661"},{"relation_name":"is_a","term_name":"organellar chromatophore membrane","termid":"GO:0070112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"organellar chromatophore outer membrane","synonyms":[{"name":"Paulinella-type chromatophore outer membrane","type":"exact"}],"termid":"GO:0070114"}


id: GO:1990834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an odorant stimulus. An odorant is any substance capable of stimulating the sense of smell.","definition_xrefs":["PMID:11268007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to odorant","termid":"GO:1990834"}


id: PBO:0070810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 40","termid":"PBO:0070810"}


id: GO:0034610
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the exonucleolytic cleavage of oligodeoxyribonucleotides to yield deoxyribonucleoside 5'-phosphates.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA nuclease activity","termid":"GO:0004536"},{"relation_name":"is_a","term_name":"oligonucleotidase activity","termid":"GO:0008946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"oligodeoxyribonucleotidase activity","synonyms":[{"name":"DNA oligonucleotidase activity","type":"exact"}],"termid":"GO:0034610"}


id: PBO:0112002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, unknown specificity, implicated in vesicle fusion, possibly multiple pathways","termid":"PBO:0112002"}


id: GO:1903914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fusion of virus membrane with host plasma membrane.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:als","PMID:23575248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of viral entry into host cell","termid":"GO:0046597"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of fusion of virus membrane with host plasma membrane","termid":"GO:1903913"},{"relation_name":"negatively_regulates","term_name":"fusion of virus membrane with host plasma membrane","termid":"GO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"negative regulation of fusion of virus membrane with host plasma membrane","synonyms":[{"name":"down regulation of fusion of virus membrane with host plasma membrane","type":"exact"},{"name":"down regulation of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"down regulation of viral envelope fusion with host cell membrane","type":"exact"},{"name":"down regulation of viral envelope fusion with host membrane","type":"exact"},{"name":"down regulation of viral envelope fusion with host plasma membrane","type":"exact"},{"name":"down regulation of viral penetration via membrane fusion","type":"exact"},{"name":"down regulation of viral-cell fusion molecule activity","type":"related"},{"name":"down-regulation of fusion of virus membrane with host plasma membrane","type":"exact"},{"name":"down-regulation of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"down-regulation of viral envelope fusion with host cell membrane","type":"exact"},{"name":"down-regulation of viral envelope fusion with host membrane","type":"exact"},{"name":"down-regulation of viral envelope fusion with host plasma membrane","type":"exact"},{"name":"down-regulation of viral penetration via membrane fusion","type":"exact"},{"name":"down-regulation of viral-cell fusion molecule activity","type":"related"},{"name":"downregulation of fusion of virus membrane with host plasma membrane","type":"exact"},{"name":"downregulation of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"downregulation of viral envelope fusion with host cell membrane","type":"exact"},{"name":"downregulation of viral envelope fusion with host membrane","type":"exact"},{"name":"downregulation of viral envelope fusion with host plasma membrane","type":"exact"},{"name":"downregulation of viral penetration via membrane fusion","type":"exact"},{"name":"downregulation of viral-cell fusion molecule activity","type":"related"},{"name":"inhibition of fusion of virus membrane with host plasma membrane","type":"narrow"},{"name":"inhibition of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"inhibition of viral envelope fusion with host cell membrane","type":"narrow"},{"name":"inhibition of viral envelope fusion with host membrane","type":"narrow"},{"name":"inhibition of viral envelope fusion with host plasma membrane","type":"narrow"},{"name":"inhibition of viral penetration via membrane fusion","type":"narrow"},{"name":"inhibition of viral-cell fusion molecule activity","type":"related"},{"name":"negative regulation of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"negative regulation of viral envelope fusion with host cell membrane","type":"exact"},{"name":"negative regulation of viral envelope fusion with host membrane","type":"exact"},{"name":"negative regulation of viral envelope fusion with host plasma membrane","type":"exact"},{"name":"negative regulation of viral penetration via membrane fusion","type":"exact"},{"name":"negative regulation of viral-cell fusion molecule activity","type":"related"}],"termid":"GO:1903914"}


id: PATO:0000757
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A balance quality inhering in a bearer by virtue of the bearer's having balance.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"balance","termid":"PATO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"balanced","termid":"PATO:0000757"}


id: GO:0047929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-gluconate = 2-dehydro-3-deoxy-D-gluconate + H2O.","definition_xrefs":["RHEA:21612","EC:4.2.1.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"gluconate dehydratase activity","secondary_identifiers":["KEGG_REACTION:R01538","MetaCyc:GLUCONATE-DEHYDRATASE-RXN"],"synonyms":[{"name":"D-gluconate dehydratase activity","type":"related"},{"name":"D-gluconate hydro-lyase (2-dehydro-3-deoxy-D-gluconate-forming)","type":"related"},{"name":"D-gluconate hydro-lyase activity","type":"related"}],"termid":"GO:0047929"}


id: PBO:0071500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 3","termid":"PBO:0071500"}


id: GO:0047419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-acetyl-D-galactosamine 6-phosphate = acetate + D-galactosamine 6-phosphate.","definition_xrefs":["MetaCyc:3.5.1.80-RXN","EC:3.5.1.25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0019213","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"N-acetylgalactosamine-6-phosphate deacetylase activity","secondary_identifiers":["RHEA:18149"],"termid":"GO:0047419"}


id: PBO:0113755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, C2 domain","termid":"PBO:0113755"}


id: GO:0043281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the activity of a cysteine-type endopeptidase involved in apoptosis.","definition_xrefs":["GOC:mtg_apoptosis","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cysteine-type endopeptidase activity","termid":"GO:2000116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cysteine-type endopeptidase activity involved in apoptotic process","secondary_identifiers":["GO:0043026"],"synonyms":[{"name":"regulation of caspase activation","type":"narrow"},{"name":"regulation of caspase activity","type":"broad"}],"termid":"GO:0043281"}


id: GO:0015986
data:
  {"annotated_genes":["SJAG_07003","SJAG_00985","SJAG_00836","SJAG_MIT37","SJAG_02564","SJAG_00133","SJAG_03925","SJAG_02598","SJAG_00542","SJAG_MIT15","SJAG_04122","SJAG_01471","SJAG_MIT09","SJAG_02105","SJAG_03114","SJAG_00915","SJAG_05204","SJAG_00438","SJAG_04422"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66562],"is_not":false,"summary":null,"term":"GO:0015986"},{"annotations":[89937,103881,88914,103971,89342,115151,115162,115157,104857,99113,99763,99734,97889,90909,101067,111928,85204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[114083],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905706"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ATP driven by transport of protons across a membrane to generate an electrochemical gradient (proton-motive force).","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP biosynthetic process","termid":"GO:0006754"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01471":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04422":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"proton motive force-driven ATP synthesis","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"ATP synthesis coupled proton transport","type":"related"},{"name":"chemiosmosis","type":"broad"}],"termid":"GO:0015986","terms_by_termid":{"GO:0015986":null,"GO:0042776":null,"GO:1905706":null}}


id: GO:0050830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to bacterium","termid":"GO:0042742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to Gram-positive bacterium","synonyms":[{"name":"Gram-positive antibacterial peptide activity","type":"related"},{"name":"defence response to Gram-positive bacteria","type":"exact"},{"name":"defence response to Gram-positive bacterium","type":"exact"},{"name":"defense response to Gram-positive bacteria","type":"exact"}],"termid":"GO:0050830"}


id: PBO:0072367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 53","termid":"PBO:0072367"}


id: GO:0006983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the accumulation of normal or misfolded proteins in the endoplasmic reticulum and leading to activation of transcription by NF-kappaB.","definition_xrefs":["PMID:10390516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER-nucleus signaling pathway","termid":"GO:0006984"},{"relation_name":"is_a","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"},{"relation_name":"is_a","term_name":"cellular response to biotic stimulus","termid":"GO:0071216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"ER overload response","secondary_identifiers":["GO:0006985"],"synonyms":[{"name":"EOR","type":"exact"},{"name":"EOR-mediated NF-kappaB activation","type":"narrow"},{"name":"EOR-mediated activation of NF-kappaB","type":"narrow"},{"name":"ER-overload response","type":"exact"},{"name":"endoplasmic reticulum overload response","type":"exact"},{"name":"positive regulation of NF-kappaB transcription factor activity by EOR","type":"narrow"},{"name":"positive regulation of NF-kappaB transcription factor activity by ER overload response","type":"narrow"}],"termid":"GO:0006983"}


