# terms

id: PBO:0059738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 12","termid":"PBO:0059738"}


id: GO:0016815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a nitrile, a compound containing the cyano radical, -CN.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles","secondary_identifiers":["EC:3.5.5.-"],"termid":"GO:0016815"}


id: PBO:0083527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SAS10/YDL153C, a component of the small ribosomal subunit processosome","termid":"PBO:0083527"}


id: PBO:0027954
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_pyridoxal_kinase_activity","termid":"PBO:0027954"}


id: PBO:0075143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptides B and B1 pseudogene 1","termid":"PBO:0075143"}


id: GO:0085025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism (symbiont) effects a change in the structure or function of its host organism, mediated by a substance secreted by the Tat complex in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host morphology or physiology via protein secreted by Tat complex (obsolete GO:0085025)","synonyms":[{"name":"modification by symbiont of host morphology or physiology via protein secreted by the Tat secretion system","type":"exact"}],"termid":"GO:0085025"}


id: GO:0046112
data:
  {"annotated_genes":["SJAG_05024","SJAG_03164","SJAG_00392","SJAG_02364","SJAG_01814","SJAG_01859","SJAG_04354","SJAG_01081","SJAG_00694","SJAG_00779","SJAG_03140","SJAG_01661","SJAG_00444","SJAG_00964","SJAG_00197"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107992,107151,94567,89479,83868,111659,112812],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006207"},{"annotations":[106432,113444,106321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046084"},{"annotations":[89599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006168"},{"annotations":[110585,93876,106322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009113"},{"annotations":[85528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019856"},{"annotations":[88028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006223"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a nucleobase, a nitrogenous base that is a constituent of a nucleic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"nucleobase metabolic process","termid":"GO:0009112"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00392":null,"SJAG_00444":null,"SJAG_00694":null,"SJAG_00779":null,"SJAG_00964":null,"SJAG_01081":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02364":null,"SJAG_03140":null,"SJAG_03164":null,"SJAG_04354":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"nucleobase biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nucleobase anabolism","type":"exact"},{"name":"nucleobase biosynthesis","type":"exact"},{"name":"nucleobase formation","type":"exact"},{"name":"nucleobase synthesis","type":"exact"}],"termid":"GO:0046112","terms_by_termid":{"GO:0006168":null,"GO:0006207":null,"GO:0006223":null,"GO:0009113":null,"GO:0019856":null,"GO:0046084":null}}


id: PBO:0001270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK-related GC kinase Sid1","termid":"PBO:0001270"}


id: GO:0003924
data:
  {"annotated_genes":["SJAG_03846","SJAG_00231","SJAG_02595","SJAG_00906","SJAG_01438","SJAG_01774","SJAG_04470","SJAG_00983","SJAG_02302","SJAG_05332","SJAG_04351","SJAG_00923","SJAG_02331","SJAG_03461","SJAG_03072","SJAG_00659","SJAG_02824","SJAG_03732","SJAG_00466","SJAG_03374","SJAG_02444","SJAG_00031","SJAG_02605","SJAG_03915","SJAG_01339","SJAG_00430","SJAG_02265","SJAG_01456","SJAG_01929","SJAG_02384","SJAG_03684","SJAG_02640","SJAG_01391","SJAG_01655","SJAG_04343","SJAG_00424","SJAG_00065","SJAG_00414","SJAG_01558","SJAG_05030","SJAG_00226","SJAG_04003","SJAG_04862","SJAG_02856","SJAG_02601","SJAG_04509","SJAG_04004","SJAG_02848","SJAG_00457","SJAG_02353","SJAG_04157","SJAG_03371","SJAG_01449","SJAG_04666","SJAG_02171","SJAG_03137","SJAG_04679","SJAG_01379","SJAG_02656","SJAG_04940","SJAG_01769","SJAG_00663","SJAG_04375","SJAG_02180","SJAG_03453","SJAG_02366","SJAG_01851","SJAG_02684","SJAG_01696","SJAG_03342","SJAG_02292","SJAG_03676","SJAG_01277","SJAG_02233","SJAG_03688","SJAG_00344","SJAG_04531"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83985,84988,85317,85517,85814,86923,87361,88044,88079,88488,88769,88861,88933,89325,89669,89670,89671,89919,90303,90399,90576,92168,93144,93820,93899,93970,94372,94373,94456,95709,95785,96188,96731,96922,97035,97313,97361,97524,98277,98704,98730,98963,99574,99655,100005,100674,100969,101482,102075,102613,103208,103247,103268,103500,103508,104777,104805,105336,105398,105826,106342,106618,106619,106917,107522,107604,108484,108485,108486,108951,110052,112019,112056,112711,113419,113589,114457,114572,114573,114574,115087],"is_not":false,"summary":null,"term":"GO:0003924"},{"annotations":[86920,68434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003925"},{"annotations":[100725],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061791"},{"annotations":[96032,98848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990606"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + H2O = GDP + H+ + phosphate.","definition_xrefs":["PMID:27218782","PMID:26832457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside triphosphate phosphatase activity","termid":"GO:0017111"}],"gene_count":77,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00065":null,"SJAG_00226":null,"SJAG_00231":null,"SJAG_00344":null,"SJAG_00414":null,"SJAG_00424":null,"SJAG_00430":null,"SJAG_00457":null,"SJAG_00466":null,"SJAG_00659":null,"SJAG_00663":null,"SJAG_00906":null,"SJAG_00923":null,"SJAG_00983":null,"SJAG_01277":null,"SJAG_01339":null,"SJAG_01379":null,"SJAG_01391":null,"SJAG_01438":null,"SJAG_01449":null,"SJAG_01456":null,"SJAG_01558":null,"SJAG_01655":null,"SJAG_01696":null,"SJAG_01769":null,"SJAG_01774":null,"SJAG_01851":null,"SJAG_01929":null,"SJAG_02171":null,"SJAG_02180":null,"SJAG_02233":null,"SJAG_02265":null,"SJAG_02292":null,"SJAG_02302":null,"SJAG_02331":null,"SJAG_02353":null,"SJAG_02366":null,"SJAG_02384":null,"SJAG_02444":null,"SJAG_02595":null,"SJAG_02601":null,"SJAG_02605":null,"SJAG_02640":null,"SJAG_02656":null,"SJAG_02684":null,"SJAG_02824":null,"SJAG_02848":null,"SJAG_02856":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03342":null,"SJAG_03371":null,"SJAG_03374":null,"SJAG_03453":null,"SJAG_03461":null,"SJAG_03676":null,"SJAG_03684":null,"SJAG_03688":null,"SJAG_03732":null,"SJAG_03846":null,"SJAG_03915":null,"SJAG_04003":null,"SJAG_04004":null,"SJAG_04157":null,"SJAG_04343":null,"SJAG_04351":null,"SJAG_04375":null,"SJAG_04470":null,"SJAG_04509":null,"SJAG_04531":null,"SJAG_04666":null,"SJAG_04679":null,"SJAG_04862":null,"SJAG_04940":null,"SJAG_05030":null,"SJAG_05332":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"GTPase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-170666","Reactome:R-HSA-164381","Reactome:R-HSA-8981353","Reactome:R-HSA-6807877","Reactome:R-HSA-1458485","Reactome:R-HSA-8982021","Reactome:R-HSA-2130725","GO:0061745","Reactome:R-HSA-170686","Reactome:R-HSA-9649736","Reactome:R-HSA-5389842","Reactome:R-HSA-5419279","Reactome:R-HSA-8854329","Reactome:R-HSA-1445143","Reactome:R-HSA-8854604","Reactome:R-HSA-418574","Reactome:R-HSA-8847534","Reactome:R-HSA-177501","Reactome:R-HSA-392212","Reactome:R-HSA-5658231","Reactome:R-HSA-8868661","Reactome:R-HSA-156923","Reactome:R-HSA-8847883","Reactome:R-HSA-5638006","Reactome:R-HSA-418582","Reactome:R-HSA-392133","Reactome:R-HSA-428941","Reactome:R-HSA-380979","Reactome:R-HSA-5623513","Reactome:R-HSA-5665809","Reactome:R-HSA-8982020","Reactome:R-HSA-983422","Reactome:R-HSA-421835","Reactome:R-HSA-8849082","Reactome:R-HSA-8854612","Reactome:R-HSA-170685","Reactome:R-HSA-8854173","Reactome:R-HSA-167415","Reactome:R-HSA-2584246","Reactome:R-HSA-9018814","Reactome:R-HSA-203973","Reactome:R-HSA-5419273","Reactome:R-HSA-5333615","Reactome:R-HSA-5389839","Reactome:R-HSA-8982025","Reactome:R-HSA-555065","Reactome:R-HSA-5672017","Reactome:R-HSA-6814833","Reactome:R-HSA-9640195","Reactome:R-HSA-165055","RHEA:19669","Reactome:R-HSA-2130641","Reactome:R-HSA-432707","Reactome:R-HSA-9645598","Reactome:R-HSA-5694527","MetaCyc:RXN0-5462","Reactome:R-HSA-8854255","Reactome:R-HSA-9018826"],"synonyms":[{"name":"ARF small monomeric GTPase activity","type":"narrow"},{"name":"GTPase activity, coupled","type":"related"},{"name":"RHEB small monomeric GTPase activity","type":"narrow"},{"name":"Rab small monomeric GTPase activity","type":"narrow"},{"name":"Ran small monomeric GTPase activity","type":"narrow"},{"name":"Ras small monomeric GTPase activity","type":"narrow"},{"name":"Rho small monomeric GTPase activity","type":"narrow"},{"name":"Sar small monomeric GTPase activity","type":"narrow"},{"name":"dynamin GTPase activity","type":"narrow"},{"name":"heterotrimeric G-protein GTPase activity","type":"narrow"},{"name":"heterotrimeric G-protein GTPase, alpha-subunit","type":"related"},{"name":"heterotrimeric G-protein GTPase, beta-subunit","type":"related"},{"name":"heterotrimeric G-protein GTPase, gamma-subunit","type":"related"},{"name":"hydrolase activity, acting on acid anhydrides, acting on GTP, involved in cellular and subcellular movement","type":"broad"},{"name":"protein-synthesizing GTPase activity","type":"narrow"},{"name":"protein-synthesizing GTPase activity, elongation","type":"narrow"},{"name":"protein-synthesizing GTPase activity, initiation","type":"narrow"},{"name":"protein-synthesizing GTPase activity, termination","type":"narrow"},{"name":"signal-recognition-particle GTPase activity","type":"narrow"},{"name":"small monomeric GTPase activity","type":"narrow"},{"name":"tubulin GTPase activity","type":"narrow"}],"termid":"GO:0003924","terms_by_termid":{"GO:0003924":null,"GO:0003925":null,"GO:0061791":null,"GO:1990606":null}}


id: PBO:0001713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg24 (predicted)","termid":"PBO:0001713"}


id: FYPO:0004953
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the presence, distribution, or morphology of the prospore membrane is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"},{"relation_name":"output_of","term_name":"abnormal prospore membrane formation","termid":"FYPO:0001914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000121"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000121"],"is_obsolete":false,"name":"abnormal prospore membrane","synonyms":[{"name":"abnormal forespore membrane","type":"exact"}],"termid":"FYPO:0004953"}


id: PBO:0029115
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_phase","termid":"PBO:0029115"}


id: SO:0001449
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polar, hydorophilic amino acid encoded by the codons AAT and AAC.","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine","synonyms":[{"name":"Asn","type":"exact"},{"name":"N","type":"exact"}],"termid":"SO:0001449"}


id: PBO:0068766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 3, pseudogene","termid":"PBO:0068766"}


id: PR:G2TRN1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1071.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRN1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1071.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1071.13","synonyms":[{"name":"Spom972h-SPAC1071.13","type":"exact"}],"termid":"PR:G2TRN1"}


id: PBO:0083472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene RPL12A/YEL054C","termid":"PBO:0083472"}


id: PBO:0031677
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_cell_cycle_arrest_in_response_to_pheromone","termid":"PBO:0031677"}


id: PBO:0030818
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glucose_import","termid":"PBO:0030818"}


id: PBO:0061506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexin 1","termid":"PBO:0061506"}


id: SO:0002375
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes a C_D_box_snoRNA. Most box C/D snoRNAs also contain long (>10 nt) sequences complementary to rRNA. Boxes C and D, as well as boxes C' and D', are usually located in close proximity, and form a structure known as the box C/D motif. This motif is important for snoRNA stability, processing, nucleolar targeting and function. A small number of box C/D snoRNAs are involved in rRNA processing; most, however, are known or predicted to serve as guide RNAs in ribose methylation of rRNA. Targeting involves direct base pairing of the snoRNA at the rRNA site to be modified and selection of a rRNA nucleotide a fixed distance from box D or D'.","definition_xrefs":["PMID:22065625","PMID:12457565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA_gene","termid":"SO:0001267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_D_box_snoRNA_gene","synonyms":[{"name":"box C/D snoRNA gene, C D box snoRNA gene, C/D box snoRNA gene","type":"exact"}],"termid":"SO:0002375"}


id: PBO:0056871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MHC class I polypeptide-related sequence B","termid":"PBO:0056871"}


id: PBO:0030652
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_cycle_arrest_in_mitotic_G2_phase_during_starvation","termid":"PBO:0030652"}


id: PBO:0057565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 760","termid":"PBO:0057565"}


id: PBO:0042673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 7","termid":"PBO:0042673"}


id: PATO:0005001
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in the bearer by virtue of the bearer having a variable number or count of an entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability","termid":"PATO:0001303"},{"relation_name":"towards","term_name":"amount","termid":"PATO:0000070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variability of count","synonyms":[{"name":"variable number","type":"related"}],"termid":"PATO:0005001"}


id: PR:O43065
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TATA-binding protein-associated factor 172 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03351","PANTHER:PTHR10799:SF225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase mot1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1826.01c","secondary_identifiers":["UniProtKB:O43065"],"synonyms":[{"name":"Spom972h-BTAF1","type":"exact"},{"name":"TBP-associated factor mot1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"modifier of transcription 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43065"}


id: GO:0050488
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + ecdysteroid = UDP + glucosyl-ecdysteroid.","definition_xrefs":["GOC:ai","PMID:10073711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"ecdysteroid UDP-glucosyltransferase activity","secondary_identifiers":["GO:0050489"],"synonyms":[{"name":"ecdysteroid UDP-glucosyl/UDP-glucuronosyl transferase activity","type":"related"}],"termid":"GO:0050488"}


id: GO:0018844
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxytetrahydrofuran = 4-hydroxybutyraldehyde.","definition_xrefs":["UM-BBD_reactionID:r0019"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxytetrahydrofuran isomerase activity (obsolete GO:0018844)","termid":"GO:0018844"}


id: PBO:0031289
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_sister_chromatid_segregation","termid":"PBO:0031289"}


id: PR:Q10220
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pcc1 gene.","definition_xrefs":["UniProtKB:Q10220","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS complex subunit SPAC4H3.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.13","synonyms":[{"name":"Spom972h-pcc1","type":"exact"},{"name":"protein PCC1 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10220"}


id: GO:0033810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: malonyl-CoA + pelargonidin 3-O-(6-caffeoyl-beta-D-glucoside) 5-O-beta-D-glucoside = CoA + 4'''-demalonylsalvianin.","definition_xrefs":["EC:2.3.1.172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"anthocyanin 5-O-glucoside 6'''-O-malonyltransferase activity","secondary_identifiers":["RHEA:21988","MetaCyc:2.3.1.172-RXN"],"synonyms":[{"name":"Ss5MaT1","type":"related"},{"name":"malonyl-CoA:pelargonidin-3-O-(6-caffeoyl-beta-D-glucoside)-5-O-beta-D-glucoside 6'''-O-malonyltransferase activity","type":"related"}],"termid":"GO:0033810"}


id: GO:0007247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Upregulation of MAP kinase activity in the context of transduction of mating pheromone signal, as described for Saccharomyces.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPK (mating sensu Saccharomyces) (obsolete GO:0007247)","synonyms":[{"name":"activation of MAPK (mating sensu Saccharomyces)","type":"exact"}],"termid":"GO:0007247"}


id: PBO:0052288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kell metallo-endopeptidase (Kell blood group)","termid":"PBO:0052288"}


id: FYPO:0007170
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype an ascus contains four nuclei, as in wild type.","definition_xrefs":["PomBase:mah","PMID:20826461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257"],"is_obsolete":false,"name":"normal number of nuclei in ascus","termid":"FYPO:0007170"}


id: GO:0042174
data:
  {"annotated_genes":["SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sporulation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporulation resulting in formation of a cellular spore","termid":"GO:0042173"},{"relation_name":"is_a","term_name":"negative regulation of sporulation","termid":"GO:0043939"},{"relation_name":"negatively_regulates","term_name":"sporulation resulting in formation of a cellular spore","termid":"GO:0030435"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sporulation resulting in formation of a cellular spore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of sporulation","type":"exact"},{"name":"down-regulation of sporulation","type":"exact"},{"name":"downregulation of sporulation","type":"exact"},{"name":"inhibition of sporulation","type":"narrow"}],"termid":"GO:0042174","terms_by_termid":{"GO:0075297":null}}


id: PBO:0070797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 27","termid":"PBO:0070797"}


id: PBO:0046074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3M pseudogene 1","termid":"PBO:0046074"}


id: PBO:0075517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle apparatus coiled-coil protein 1","termid":"PBO:0075517"}


id: PBO:0028125
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_agglutination","termid":"PBO:0028125"}


id: GO:0051854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process by which an organism causes the formation in its symbiont organism of an abnormal growth whose cells have been transformed and continue to exist in the absence of the first organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete induction in symbiont of tumor, nodule, or growth containing transformed cells (obsolete GO:0051854)","synonyms":[{"name":"induction in symbiont of tumor, nodule, or growth containing transformed cells","type":"exact"}],"termid":"GO:0051854"}


id: GO:0086070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates interactions between an SA node cardiomyocyte and its surroundings that contributes to the process of the SA node cardiomyocyte communicating with an atrial cardiomyocyte in cardiac conduction. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication involved in cardiac conduction","termid":"GO:0086065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"SA node cell to atrial cardiac muscle cell communication","synonyms":[{"name":"SA node cardiac muscle cell to atrial cardiac muscle cell communication","type":"exact"},{"name":"SA node cardiomyocyte to atrial cardiomyocyte communication","type":"exact"},{"name":"SAN cardiomyocyte to atrial cardiomyocyte communication","type":"exact"},{"name":"sinoatrial node cardiomyocyte to atrial cardiomyocyte communication","type":"exact"},{"name":"sinus node cardiomyocyte to atrial cardiomyocyte communication","type":"narrow"}],"termid":"GO:0086070"}


id: PBO:0073334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 10","termid":"PBO:0073334"}


id: GO:0001608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a nucleotide and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:dph","IUPHAR_GPCR:1294","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled nucleotide receptor activity","synonyms":[{"name":"G protein coupled nucleotide receptor activity","type":"exact"},{"name":"G-protein coupled nucleotide receptor activity","type":"exact"},{"name":"nucleotide receptor activity, G protein coupled","type":"exact"},{"name":"nucleotide receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0001608"}


id: GO:0044166
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membranes of the host cell endoplasmic reticulum.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"part_of","term_name":"host cell endoplasmic reticulum","termid":"GO:0044165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endoplasmic reticulum lumen","synonyms":[{"name":"host endoplasmic reticulum lumen","type":"exact"}],"termid":"GO:0044166"}


id: SO:0001309
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2_methylthio_N6_hydroxynorvalyl_carbamoyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_methylthio_N6_hydroxynorvalyl_carbamoyladenosine","secondary_identifiers":["RNAMOD:015"],"synonyms":[{"name":"2-methylthio-N6-hydroxynorvalyl carbamoyladenosine","type":"exact"},{"name":"ms2hn6A","type":"exact"},{"name":"two methylthio N6 hydroxynorvalyl carbamoyladenosine","type":"exact"}],"termid":"SO:0001309"}


id: FYPO:0007991
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize valine, and therefore requires leucine in the medium for vegetative cell growth.","definition_xrefs":["PMID:35325114","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for valine","synonyms":[{"name":"growth auxotrophic for valine during mitotic cell cycle","type":"exact"},{"name":"growth auxotrophic for valine during vegetative growth","type":"exact"},{"name":"valine auxotrophy","type":"exact"}],"termid":"FYPO:0007991"}


id: PBO:0085871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; homologous to the medium chain of mammalian clathrin-associated protein complex; involved in vesicular transport","termid":"PBO:0085871"}


id: GO:0007015
data:
  {"annotated_genes":["SJAG_02700","SJAG_03455","SJAG_00938","SJAG_04479","SJAG_01894","SJAG_00970","SJAG_01993","SJAG_03025","SJAG_02245","SJAG_02566","SJAG_03086","SJAG_04621","SJAG_01268","SJAG_01732","SJAG_02864","SJAG_00677","SJAG_04522","SJAG_04703","SJAG_03088","SJAG_03380","SJAG_04498","SJAG_02228","SJAG_04100","SJAG_02075","SJAG_01388","SJAG_00521","SJAG_00279","SJAG_01384","SJAG_03011","SJAG_04624","SJAG_01964","SJAG_04982","SJAG_04172"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101632],"is_not":false,"summary":null,"term":"GO:0007015"},{"annotations":[85401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051764"},{"annotations":[101224,94901,95751,93988,95929,84228,99388,86742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090135"},{"annotations":[85402,101206,89890,97788,114729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051017"},{"annotations":[95716,104205,112267,114730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061572"},{"annotations":[112268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061573"},{"annotations":[88596,96992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030042"},{"annotations":[101207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051639"},{"annotations":[64160,89891,88380,93791,94902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030041"},{"annotations":[85444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045010"},{"annotations":[94360,85403,104206,94100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071520"},{"annotations":[98815,99389,95930,94903,86743,95752,103230,84229,101225,93989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034314"},{"annotations":[84335,94963,88381,110400],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051016"},{"annotations":[112269,104207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070649"},{"annotations":[101210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110009"},{"annotations":[94102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903479"},{"annotations":[86941],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0034316"},{"annotations":[103685],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032231"},{"annotations":[86745,97821,98817,85904,101228],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0030833"},{"annotations":[110403,93794],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular fiber organization","termid":"GO:0097435"},{"relation_name":"part_of","term_name":"actin cytoskeleton organization","termid":"GO:0030036"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_00677":null,"SJAG_00938":null,"SJAG_00970":null,"SJAG_01268":null,"SJAG_01384":null,"SJAG_01388":null,"SJAG_01732":null,"SJAG_01894":null,"SJAG_01964":null,"SJAG_01993":null,"SJAG_02075":null,"SJAG_02228":null,"SJAG_02245":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_02864":null,"SJAG_03011":null,"SJAG_03025":null,"SJAG_03086":null,"SJAG_03088":null,"SJAG_03380":null,"SJAG_03455":null,"SJAG_04100":null,"SJAG_04172":null,"SJAG_04479":null,"SJAG_04498":null,"SJAG_04522":null,"SJAG_04621":null,"SJAG_04624":null,"SJAG_04703":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036"],"is_obsolete":false,"name":"actin filament organization","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"actin filament organisation","type":"exact"},{"name":"regulation of actin filament localization","type":"narrow"}],"termid":"GO:0007015","terms_by_termid":{"GO:0007015":null,"GO:0030041":null,"GO:0030042":null,"GO:0030833":null,"GO:0032231":null,"GO:0034314":null,"GO:0034316":null,"GO:0042989":null,"GO:0045010":null,"GO:0051016":null,"GO:0051017":null,"GO:0051639":null,"GO:0051764":null,"GO:0061572":null,"GO:0061573":null,"GO:0070649":null,"GO:0071520":null,"GO:0090135":null,"GO:0110009":null,"GO:1903479":null}}


id: PBO:0113022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of the capping protein heterodimer (Cap1p and Cap2p); capping protein (CP) binds to the barbed ends of actin filaments preventing further polymerization; localized predominantly to cortical actin patches and the cytokinetic contractile ring; protein increases in abundance and relocalizes from bud neck to plasma membrane upon DNA replication stress","termid":"PBO:0113022"}


id: PBO:0030932
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glutamate-ammonia_ligase_activity","termid":"PBO:0030932"}


id: PBO:0070222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 155 pseudogene","termid":"PBO:0070222"}


id: PBO:0089625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex/transcription factor TFIID complex subunit A Taf12","termid":"PBO:0089625"}


id: GO:0099579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled neurotransmitter receptor activity, occurring in the postsynaptic membrane, involved in regulation of postsynaptic membrane potential.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled neurotransmitter receptor activity","termid":"GO:0099528"},{"relation_name":"is_a","term_name":"neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential","termid":"GO:0099529"},{"relation_name":"is_a","term_name":"G protein-coupled receptor activity involved in regulation of postsynaptic membrane potential","termid":"GO:0099530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential","synonyms":[{"name":"G-protein coupled neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential","type":"exact"}],"termid":"GO:0099579"}


id: PBO:0090598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rix1 complex Armadillo-type fold Ipi1","termid":"PBO:0090598"}


id: GO:2001257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cation channel activity.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of monoatomic cation transmembrane transport","termid":"GO:1904062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of cation channel activity","synonyms":[{"name":"regulation of cation diffusion facilitator activity","type":"exact"},{"name":"regulation of nonselective cation channel activity","type":"exact"}],"termid":"GO:2001257"}


id: PBO:0027786
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_serine_phosphorylation_during_nitrogen_starvation","termid":"PBO:0027786"}


id: GO:0034917
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-methylhex-2-enoyl-CoA + H2O = 3-hydroxy-2-methylhexanoyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-methylhex-2-enoyl-CoA hydratase activity (obsolete GO:0034917)","termid":"GO:0034917"}


id: GO:1900727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of osmoregulated periplasmic glucan.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan biosynthetic process","termid":"GO:0009250"},{"relation_name":"is_a","term_name":"osmoregulated periplasmic glucan metabolic process","termid":"GO:1900725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"osmoregulated periplasmic glucan biosynthetic process","synonyms":[{"name":"osmoregulated periplasmic glucan anabolism","type":"exact"},{"name":"osmoregulated periplasmic glucan biosynthesis","type":"exact"},{"name":"osmoregulated periplasmic glucan formation","type":"exact"},{"name":"osmoregulated periplasmic glucan synthesis","type":"exact"}],"termid":"GO:1900727"}


id: PR:O13820
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erg5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 61 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.04","synonyms":[{"name":"C-22 sterol desaturase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-erg5","type":"exact"}],"termid":"PR:O13820"}


id: PBO:0002033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit Sen15 (predicted)","termid":"PBO:0002033"}


id: GO:0021609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the accessory nerve This process pertains to the physical shaping of a rudimentary structure. The spinal branch of this motor nerve innervates the trapezius and the sternocleidomastoid muscles. The cranial branch joins the vagus nerve and innervates the same targets as the vagus nerve.","definition_xrefs":["GOC:cls","GOC:jid","GO_REF:0000021","GOC:dph","ISBN:0838580343","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"accessory nerve morphogenesis","termid":"GO:0021607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"accessory nerve structural organization","synonyms":[{"name":"CN XI structural organization","type":"related"},{"name":"accessory nerve structural organisation","type":"exact"}],"termid":"GO:0021609"}


id: PBO:0077090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tigger transposable element derived 5","termid":"PBO:0077090"}


id: PBO:0028086
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nuclear_body","termid":"PBO:0028086"}


id: PBO:0074380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG1 pseudogene 6","termid":"PBO:0074380"}


id: PBO:0061746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 like export factor 1","termid":"PBO:0061746"}


id: PBO:0026874
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_DNA_double-strand_break_resectioning","termid":"PBO:0026874"}


id: PBO:0011129
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA ATPase Like Fidgetin","termid":"PBO:0011129"}


id: PBO:0088485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonuclease III, endonuclease domain superfamily","termid":"PBO:0088485"}


id: PBO:0016960
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitin DeAcetylase","termid":"PBO:0016960"}


id: GO:0006739
data:
  {"annotated_genes":["SJAG_02297","SJAG_03934","SJAG_03852","SJAG_01566","SJAG_00501","SJAG_01582","SJAG_02148","SJAG_05314","SJAG_00633","SJAG_02696","SJAG_04362","SJAG_03091","SJAG_02154","SJAG_03946","SJAG_04263","SJAG_01824","SJAG_00685","SJAG_04334","SJAG_00070","SJAG_02191","SJAG_03786"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92531,87976,93543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"},{"annotations":[101176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006742"},{"annotations":[95847,98171,91178,91177,96936,98170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006740"},{"annotations":[85014,109898,92437,104497],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0009052"},{"annotations":[107657,90599,93057,111416,92967,94259,114535],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0009051"},{"annotations":[85769],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905857"},{"annotations":[74924],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; metabolism may be of either the oxidized form, NADP, or the reduced form, NADPH.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"},{"relation_name":"is_a","term_name":"nicotinamide nucleotide metabolic process","termid":"GO:0046496"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_00501":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_01566":null,"SJAG_01582":null,"SJAG_01824":null,"SJAG_02148":null,"SJAG_02154":null,"SJAG_02191":null,"SJAG_02297":null,"SJAG_02696":null,"SJAG_03091":null,"SJAG_03786":null,"SJAG_03852":null,"SJAG_03934":null,"SJAG_03946":null,"SJAG_04263":null,"SJAG_04334":null,"SJAG_04362":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"NADP metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"NAD phosphorylation and dephosphorylation","type":"related"},{"name":"NADP (oxidized) metabolic process","type":"exact"},{"name":"NADP (oxidized) metabolism","type":"exact"},{"name":"NADP (reduced) metabolic process","type":"exact"},{"name":"NADP (reduced) metabolism","type":"exact"},{"name":"NADP metabolism","type":"exact"},{"name":"NADPH metabolic process","type":"exact"},{"name":"NADPH metabolism","type":"exact"},{"name":"nicotinamide adenine dinucleotide phosphate metabolic process","type":"exact"},{"name":"nicotinamide adenine dinucleotide phosphate metabolism","type":"exact"},{"name":"oxidized NADP metabolic process","type":"exact"},{"name":"oxidized NADP metabolism","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide phosphate metabolic process","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide phosphate metabolism","type":"exact"},{"name":"reduced NADP metabolic process","type":"exact"},{"name":"reduced NADP metabolism","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide phosphate metabolic process","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide phosphate metabolism","type":"exact"}],"termid":"GO:0006739","terms_by_termid":{"GO:0006740":null,"GO:0006741":null,"GO:0006742":null,"GO:0009051":null,"GO:0009052":null,"GO:0043456":null,"GO:1905857":null}}


id: PBO:0029577
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_threonine_phosphorylation_at_Thr-Pro_site","termid":"PBO:0029577"}


id: SO:0000617
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"This type of promoter recruits RNA pol III. This promoter is intragenic and includes an A box, an intermediate element, and a C box. This is well conserved in the 5s rRNA promoters across species.","definition_xrefs":["PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNApol_III_promoter","termid":"SO:0000171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNApol_III_promoter_type_1","synonyms":[{"name":"RNApol III promoter type 1","type":"exact"}],"termid":"SO:0000617"}


id: PBO:0089142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain Sre1 cleavage protein","termid":"PBO:0089142"}


id: PBO:0047107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 156 member B","termid":"PBO:0047107"}


id: PBO:0072963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretogranin V","termid":"PBO:0072963"}


id: PBO:0089085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase,  human DHRS7 family","termid":"PBO:0089085"}


id: PBO:0044449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 27, pseudogene","termid":"PBO:0044449"}


id: GO:0007166
data:
  {"annotated_genes":["SJAG_02823","SJAG_02258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101595,104515],"is_not":false,"summary":null,"term":"GO:0007166"}]},"cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor located on the cell surface. The pathway ends with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02258":null,"SJAG_02823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell surface receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell surface receptor linked signal transduction","type":"exact"},{"name":"cell surface receptor linked signaling pathway","type":"exact"},{"name":"cell surface receptor linked signalling pathway","type":"exact"}],"termid":"GO:0007166","terms_by_termid":{"GO:0007166":null}}


id: FYPO:0005700
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the equatorial microtubule organizing center (eMTOC) does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000934"},{"relation_name":"is_a","term_name":"abolished protein localization to cell division site","termid":"FYPO:0001880"},{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule organizing center","termid":"FYPO:0005702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to eMTOC","synonyms":[{"name":"abolished protein localisation to eMTOC","type":"exact"},{"name":"abolished protein localization to eMTOC during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to eMTOC during vegetative growth","type":"exact"},{"name":"abolished protein localization to equatorial microtubule organizing center","type":"exact"},{"name":"protein absent from eMTOC","type":"related"},{"name":"protein localization to eMTOC abolished","type":"exact"}],"termid":"FYPO:0005700"}


id: GO:0043718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-(hydroxymethyl)glutarate + NAD+ = 2-formylglutarate + H+ + NADH.","definition_xrefs":["EC:1.1.1.291","RHEA:15505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-hydroxymethylglutarate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R07985","MetaCyc:1.1.1.291-RXN","Wikipedia:2-hydroxymethylglutarate_dehydrogenase"],"synonyms":[{"name":"(S)-2-hydroxymethylglutarate:NAD+ oxidoreductase activity","type":"related"},{"name":"HgD","type":"exact"}],"termid":"GO:0043718"}


id: GO:1904182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pyruvate dehydrogenase activity.","definition_xrefs":["GOC:dph","PMID:25525879","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pyruvate dehydrogenase activity","synonyms":[{"name":"regulation of pyruvic acid dehydrogenase activity","type":"exact"},{"name":"regulation of pyruvic dehydrogenase activity","type":"exact"}],"termid":"GO:1904182"}


id: PBO:0029631
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_exocytosis","termid":"PBO:0029631"}


id: SO:0001918
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cytosine methylated at the 5 carbon.","definition_xrefs":["SO:rtapella"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated_cytosine","termid":"SO:0000114"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_methylcytosine","secondary_identifiers":["http://www.insdc.org/files/feature_table.html#7.4.2","http:http\\://www.pacificbiosciences.com/pdf/WP_Detecting_DNA_Base_Modifications_Using_SMRT_Sequencing.pdf"],"synonyms":[{"name":"5 methylcytosine","type":"exact"},{"name":"5-mC","type":"exact"},{"name":"m-5C","type":"exact"},{"name":"m5c","type":"exact"}],"termid":"SO:0001918"}


id: GO:0007224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of activation of the transmembrane protein Smoothened.","definition_xrefs":["GOC:mah","PMID:15205520","PMID:15057936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"smoothened signaling pathway","secondary_identifiers":["Wikipedia:Hedgehog_signaling_pathway"],"synonyms":[{"name":"Shh signaling pathway","type":"related"},{"name":"Sonic hedgehog signaling pathway","type":"narrow"},{"name":"hedgehog signaling pathway","type":"exact"},{"name":"hh signaling pathway","type":"narrow"},{"name":"hh signalling pathway","type":"narrow"},{"name":"smoothened signalling pathway","type":"exact"}],"termid":"GO:0007224"}


id: GO:2001003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pectin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"regulates","term_name":"pectin catabolic process","termid":"GO:0045490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of pectin catabolic process","synonyms":[{"name":"regulation of pectin breakdown","type":"exact"},{"name":"regulation of pectin catabolism","type":"exact"},{"name":"regulation of pectin degradation","type":"exact"}],"termid":"GO:2001003"}


id: GO:0072498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring during the embryonic phase, whose specific outcome is the progression of the skeletal joints over time, from formation to mature structure.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic skeletal system development","termid":"GO:0048706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic skeletal joint development","termid":"GO:0072498"}


id: PBO:0110105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase, type II Lsb6","termid":"PBO:0110105"}


id: PBO:0050222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2","termid":"PBO:0050222"}


id: FYPO:0000744
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to actin cortical patches is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell cortex during vegetative growth","termid":"FYPO:0001402"},{"relation_name":"is_a","term_name":"normal protein localization to actin cytoskeleton during vegetative growth","termid":"FYPO:0003441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to actin cortical patch","synonyms":[{"name":"normal protein localisation to actin cortical patch","type":"exact"},{"name":"normal protein localization to F-actin patch","type":"exact"},{"name":"normal protein localization to actin cortical patch during mitotic cell cycle","type":"related"},{"name":"normal protein localization to actin cortical patch during vegetative growth","type":"exact"},{"name":"normal protein localization to actin patch","type":"exact"}],"termid":"FYPO:0000744"}


id: FYPO:0004272
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ascospore release from an ascus is abnormal.","definition_xrefs":["GO:0071998","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process phenotype","termid":"FYPO:0000679"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abnormal ascospore release from ascus","termid":"FYPO:0004272"}


id: GO:0044534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of apoptosis in the bitten organism.","definition_xrefs":["GOC:fj","PMID:17983639","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in modulation of apoptotic process in another organism (obsolete GO:0044534)","synonyms":[{"name":"envenomation resulting in modulation of apoptotic process in other organism","type":"exact"}],"termid":"GO:0044534"}


id: GO:0050401
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-xylonate = 2-dehydro-3-deoxy-D-arabinonate + H2O.","definition_xrefs":["RHEA:19157","EC:4.2.1.82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"xylonate dehydratase activity","secondary_identifiers":["MetaCyc:XYLONATE-DEHYDRATASE-RXN","KEGG_REACTION:R02429"],"synonyms":[{"name":"D-xylo-aldonate dehydratase activity","type":"related"},{"name":"D-xylonate dehydratase activity","type":"related"},{"name":"D-xylonate hydro-lyase (2-dehydro-3-deoxy-D-xylonate-forming)","type":"related"},{"name":"D-xylonate hydro-lyase activity","type":"related"}],"termid":"GO:0050401"}


id: GO:0106217
data:
  {"annotated_genes":["SJAG_04453","SJAG_00499"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102832,106229],"is_not":false,"summary":null,"term":"GO:0106217"}]},"cv_name":"biological_process","definition":"The process whereby a cytosine in a tRNA is methylated at position 3 of the cytosine.","definition_xrefs":["PMID:28655767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methylation","termid":"GO:0030488"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00499":null,"SJAG_04453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"tRNA C3-cytosine methylation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106217","terms_by_termid":{"GO:0106217":null}}


id: GO:1904698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of acinar cell proliferation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:9788538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"regulation of acinar cell proliferation","termid":"GO:1904697"},{"relation_name":"negatively_regulates","term_name":"acinar cell proliferation","termid":"GO:1990863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of acinar cell proliferation","synonyms":[{"name":"down regulation of acinar cell proliferation","type":"exact"},{"name":"down regulation of acinic cell proliferation","type":"exact"},{"name":"down regulation of acinous cell proliferation","type":"exact"},{"name":"down-regulation of acinar cell proliferation","type":"exact"},{"name":"down-regulation of acinic cell proliferation","type":"exact"},{"name":"down-regulation of acinous cell proliferation","type":"exact"},{"name":"downregulation of acinar cell proliferation","type":"exact"},{"name":"downregulation of acinic cell proliferation","type":"exact"},{"name":"downregulation of acinous cell proliferation","type":"exact"},{"name":"inhibition of acinar cell proliferation","type":"narrow"},{"name":"inhibition of acinic cell proliferation","type":"narrow"},{"name":"inhibition of acinous cell proliferation","type":"narrow"},{"name":"negative regulation of acinic cell proliferation","type":"exact"},{"name":"negative regulation of acinous cell proliferation","type":"exact"}],"termid":"GO:1904698"}


id: GO:0048774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a cyanophore cell. Cyanophores are pigment cells derived from the neural crest. They contain a blue pigment of unknown chemical composition. The pigment is stored in fibrous organelles termed cyanosomes.","definition_xrefs":["GOC:mh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanophore differentiation","synonyms":[{"name":"cyanophore cell differentiation","type":"exact"}],"termid":"GO:0048774"}


id: GO:0048519
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id: PBO:0040287
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase Na+/K+ transporting subunit beta 2","termid":"PBO:0040287"}


id: GO:0090174
data:
  {"annotated_genes":["SJAG_01633","SJAG_04023","SJAG_03670","SJAG_04513","SJAG_00204","SJAG_02587","SJAG_00171","SJAG_03347","SJAG_00557","SJAG_00430","SJAG_03889","SJAG_03403","SJAG_05184","SJAG_00380","SJAG_02241","SJAG_03552","SJAG_01697","SJAG_02595","SJAG_01324","SJAG_04978","SJAG_02315","SJAG_04739","SJAG_03848","SJAG_01379","SJAG_00826","SJAG_03536","SJAG_00810"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016320"},{"annotations":[86249,90387,95782,97188,112990,95577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034058"},{"annotations":[92020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048210"},{"annotations":[84604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048288"},{"annotations":[101774],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035493"},{"annotations":[103458,94170,95970,96920,97153,108764,105726,113599,113638,86645,96286,104756,114630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006906"},{"annotations":[91628,105879,104099,113709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048280"}]},"cv_name":"biological_process","definition":"The joining of two lipid bilayers to form a single organelle membrane.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle fusion","termid":"GO:0048284"},{"relation_name":"is_a","term_name":"membrane fusion","termid":"GO:0061025"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00171":null,"SJAG_00204":null,"SJAG_00380":null,"SJAG_00430":null,"SJAG_00557":null,"SJAG_00810":null,"SJAG_00826":null,"SJAG_01324":null,"SJAG_01379":null,"SJAG_01633":null,"SJAG_01697":null,"SJAG_02241":null,"SJAG_02315":null,"SJAG_02587":null,"SJAG_02595":null,"SJAG_03347":null,"SJAG_03403":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03670":null,"SJAG_03848":null,"SJAG_03889":null,"SJAG_04023":null,"SJAG_04513":null,"SJAG_04739":null,"SJAG_04978":null,"SJAG_05184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"organelle membrane fusion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090174","terms_by_termid":{"GO:0006906":null,"GO:0016320":null,"GO:0034058":null,"GO:0035493":null,"GO:0048210":null,"GO:0048280":null,"GO:0048288":null}}


id: PBO:0029960
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cytochrome-c_oxidase_activity","termid":"PBO:0029960"}


id: PBO:0036478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase, PP4 complex subunit Ppe2","termid":"PBO:0036478"}


id: PBO:0039689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC down-regulated 1","termid":"PBO:0039689"}


id: PR:Q9Y802
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsd1 gene.","definition_xrefs":["UniProtKB:Q9Y802","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine-specific histone demethylase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC146.09c","synonyms":[{"name":"Spom972h-lsd1","type":"exact"}],"termid":"PR:Q9Y802"}


id: PBO:0064415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNMA family member 8B","termid":"PBO:0064415"}


id: PBO:0089778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific serine/threonine protein kinase (NDR family) Mug27/Slk1","termid":"PBO:0089778"}


id: GO:0070060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin nucleation process in which actin monomers combine in the absence of any existing actin filaments; elongation of the actin oligomer formed by nucleation leads to the formation of an unbranched filament.","definition_xrefs":["PMID:17477841","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin nucleation","termid":"GO:0045010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"'de novo' actin filament nucleation","synonyms":[{"name":"formin-mediated actin filament nucleation","type":"narrow"},{"name":"unbranched actin filament nucleation","type":"related"}],"termid":"GO:0070060"}


id: PBO:0073949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 20 member 1 pseudogene 2","termid":"PBO:0073949"}


id: PBO:0001538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminotransferase class I and II (predicted)","termid":"PBO:0001538"}


id: PBO:0067363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 462, pseudogene","termid":"PBO:0067363"}


id: PBO:0083016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dehydrogenase involved in ubiquinone and sphingolipid metabolism; converts 4-hydroxybenzaldehyde into 4-hydroxybenzoate for ubiquinone anabolism, hexadecenal to hexadecenoic acid in sphingosine 1-phosphate catabolism; human homolog ALDH3A2, mutated in Sjogren-Larsson syndrome, can rescue yeast hfd1 mutant; human ALDH3A1, but not ALDH3A2, rescues pABA- respiratory growth phenotype of hfd1 null; data suggest that dual functions of Hfd1p have diverged in human ALDH3A1, ALDH3A2","termid":"PBO:0083016"}


id: GO:0071599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the otic vesicle over time, from its formation to the mature structure. The otic vesicle is a transient embryonic structure formed during development of the vertebrate inner ear.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"},{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"inner ear development","termid":"GO:0048839"},{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"otic vesicle development","termid":"GO:0071599"}


id: PBO:0058466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5195","termid":"PBO:0058466"}


id: GO:0032942
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,4,5,6-tetrakisphosphate + ATP = 1D-myo-inositol 1,2,4,5,6-pentakisphosphate + ADP + H+.","definition_xrefs":["PMID:16107538","MetaCyc:RXN-7182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate kinase activity","termid":"GO:0051765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"inositol-1,4,5,6-tetrakisphosphate 2-kinase activity","synonyms":[{"name":"1D-myo-inositol-tetrakisphosphate 2-kinase activity","type":"broad"},{"name":"inositol tetrakisphosphate 2-kinase activity","type":"broad"},{"name":"inositol-tetrakisphosphate 2-kinase activity","type":"broad"}],"termid":"GO:0032942"}


id: GO:0047312
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + L-phenylalanine = phenylpyruvate + L-alanine.","definition_xrefs":["RHEA:13053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic-amino-acid transaminase activity","termid":"GO:0008793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016769","GO:0016740"],"is_obsolete":false,"name":"L-phenylalanine-pyruvate transaminase activity","secondary_identifiers":["EC:2.6.1.58","MetaCyc:2.6.1.58-RXN","KEGG_REACTION:R00692","Reactome:R-HSA-893593"],"synonyms":[{"name":"L-histidine:pyruvate aminotransferase activity","type":"related"},{"name":"L-phenylalanine(L-histidine):pyruvate aminotransferase activity","type":"broad"},{"name":"L-phenylalanine:pyruvate aminotransferase activity","type":"exact"},{"name":"L-phenylalanine:pyruvate transaminase activity","type":"exact"},{"name":"histidine aminotransferase activity","type":"related"},{"name":"histidine:pyruvate aminotransferase activity","type":"related"},{"name":"phenylalanine (histidine) aminotransferase activity","type":"broad"},{"name":"phenylalanine(histidine) aminotransferase activity","type":"broad"},{"name":"phenylalanine(histidine) transaminase activity","type":"broad"},{"name":"phenylalanine(histidine):pyruvate aminotransferase activity","type":"broad"}],"termid":"GO:0047312"}


id: PBO:0085236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidase that deconjugates Smt3/SUMO-1 peptides from proteins; plays a role in chromosome cohesion at centromeric regions and recovery from checkpoint arrest induced by DNA damage or DNA replication defects; potential Cdc28p substrate; human homolog PML implicated in promyelocytic leukemia can partially complement yeast null mutant","termid":"PBO:0085236"}


id: PBO:0081097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 22","termid":"PBO:0081097"}


id: PBO:0057325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 519e","termid":"PBO:0057325"}


id: GO:0035266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of a meristem, a region of tissue in a plant that is composed of one or more undifferentiated cells capable of undergoing mitosis and differentiation.","definition_xrefs":["GOC:bf","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"meristem development","termid":"GO:0048507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meristem growth","termid":"GO:0035266"}


id: PBO:0085930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mitochondrial protein that physically interacts with Tim23p; null mutant displays reduced respiratory growth","termid":"PBO:0085930"}


id: PBO:0031595
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_positive_regulation_of_transcription","termid":"PBO:0031595"}


id: GO:0085012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the symbiont organism by a Tat complex. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via protein secreted by Tat complex (obsolete GO:0085012)","synonyms":[{"name":"interaction with host via protein secreted by Tat secretion system","type":"exact"}],"termid":"GO:0085012"}


id: GO:0003368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a cell to the extracellular matrix that contributes to the directed movement of a mesendodermal cell.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-matrix adhesion involved in ameboidal cell migration","termid":"GO:0003366"},{"relation_name":"part_of","term_name":"cell migration involved in mesendoderm migration","termid":"GO:0090134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell-matrix adhesion involved in mesendodermal cell migration","termid":"GO:0003368"}


id: GO:0160138
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(2604) in 23S rRNA = pseudouridine(2604) in 23S rRNA.","definition_xrefs":["EC:5.4.99.21","RHEA:38875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthase activity","termid":"GO:0120159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"23S rRNA pseudouridine(2604) synthase activity","termid":"GO:0160138"}


id: GO:0071452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a singlet oxygen stimulus. Singlet oxygen is a dioxygen (O2) molecule in which two 2p electrons have similar spin. Singlet oxygen is more highly reactive than the form in which these electrons are of opposite spin, and it is produced in mutant chloroplasts lacking carotenoids and by leukocytes during metabolic burst.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to singlet oxygen","termid":"GO:0000304"},{"relation_name":"is_a","term_name":"cellular response to reactive oxygen species","termid":"GO:0034614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to singlet oxygen","termid":"GO:0071452"}


id: FYECO:0000308
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which doxorubicin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ doxorubicin","synonyms":[{"name":"+ 14-hydroxydaunomycin ","type":"related"},{"name":"+ 14-hydroxydaunorubicine ","type":"related"},{"name":"+ adriamycin","type":"related"}],"termid":"FYECO:0000308"}


id: PBO:0050013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, A","termid":"PBO:0050013"}


id: PBO:0087431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit C of the V1 peripheral membrane domain of V-ATPase; part of the electrogenic proton pump found throughout the endomembrane system; required for the V1 domain to assemble onto the vacuolar membrane; the V1 peripheral membrane domain of vacuolar H+-ATPase (V-ATPase) has eight subunits","termid":"PBO:0087431"}


id: PBO:0041117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-TFIID TATA-box binding protein associated factor 1","termid":"PBO:0041117"}


id: PBO:0029918
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_lanosterol_level","termid":"PBO:0029918"}


id: GO:0051234
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id: PBO:0072396
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id: GO:1902524
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id: FYPO:0005306
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id: PR:P79082
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id: PBO:0050206
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id: PBO:0004010
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id: FYPO:0000501
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id: GO:1902011
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving poly(ribitol phosphate) teichoic acid.","definition_xrefs":["PMID:11882717","UniPathway:UPA00790","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid metabolic process","termid":"GO:0046374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(ribitol phosphate) teichoic acid metabolic process","synonyms":[{"name":"poly(ribitol phosphate) teichoic acid metabolism","type":"exact"}],"termid":"GO:1902011"}


id: PBO:0070808
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 38","termid":"PBO:0070808"}


id: GO:0048385
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retinoic acid receptor signaling pathway activity.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"retinoic acid receptor signaling pathway","termid":"GO:0048384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of retinoic acid receptor signaling pathway","synonyms":[{"name":"regulation of RAR signaling pathway","type":"exact"},{"name":"regulation of retinoic acid receptor signalling pathway","type":"exact"}],"termid":"GO:0048385"}


id: GO:0043617
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id: PR:Q9UU88
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An adenylate kinase isoenzyme 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04983","PANTHER:PTHR12595:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase isoenzyme 6 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC830.11c","secondary_identifiers":["UniProtKB:Q9UU88"],"synonyms":[{"name":"AK/ATPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"AK6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-AK6","type":"exact"},{"name":"dual activity adenylate kinase/ATPase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UU88"}


id: PBO:0048380
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id: GO:0045483
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id: GO:1990730
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex between the ATPase VCP (p97) and its cofactor p47 (NSFL1C). In human, the protein complex consists of one homotrimer of NSFL1C/p47 per homohexamer of VCP/p97.","definition_xrefs":["GOC:PARL","PMID:9214505","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"VCP-NSFL1C complex","synonyms":[{"name":"p97-p47 complex","type":"exact"}],"termid":"GO:1990730"}


id: PBO:0059074
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id: GO:0018887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 4-carboxy-4'-sulfoazobenzene, a sulfonated azo compound synthesized by nitro-amine condensation from sulfanilic acid and 4-nitrobenzoic acid.","definition_xrefs":["PMID:9603860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"4-carboxy-4'-sulfoazobenzene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:csab"],"synonyms":[{"name":"4-carboxy-4'-sulfoazobenzene metabolism","type":"exact"},{"name":"4-carboxy-4'-sulphoazobenzene metabolic process","type":"exact"},{"name":"4-carboxy-4'-sulphoazobenzene metabolism","type":"exact"}],"termid":"GO:0018887"}


id: PBO:0013053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Sap130","termid":"PBO:0013053"}


id: FYPO:0006618
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is greater than normal during a cellular response to bleomycin.","definition_xrefs":["PomBase:mah","PMID:22064477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of Rad52 foci during vegetative growth","termid":"FYPO:0000972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased number of Rad52 foci during cellular response to bleomycin","synonyms":[{"name":"increased number of Rad22 foci during cellular response to bleomycin","type":"exact"},{"name":"increased number of Rad52 foci during cellular response to DNA damage","type":"related"},{"name":"increased number of Rad52 foci during cellular response to bleomycin during mitotic cell cycle","type":"related"},{"name":"increased number of Rad52 foci during cellular response to bleomycin during vegetative growth","type":"exact"}],"termid":"FYPO:0006618"}


id: GO:1900842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of helvolic acid biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid biosynthetic process","termid":"GO:0010893"},{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of helvolic acid biosynthetic process","termid":"GO:1900840"},{"relation_name":"positively_regulates","term_name":"helvolic acid biosynthetic process","termid":"GO:1900812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0006629","GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of helvolic acid biosynthetic process","synonyms":[{"name":"up regulation of helvolic acid biosynthetic process","type":"exact"},{"name":"up-regulation of helvolic acid biosynthetic process","type":"exact"},{"name":"upregulation of helvolic acid biosynthetic process","type":"exact"}],"termid":"GO:1900842"}


id: PR:O14246
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tpz1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protection of telomeres protein tpz1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.16c","synonyms":[{"name":"Spom972h-tpz1","type":"exact"},{"name":"meiotically up-regulated gene 169 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14246"}


id: PBO:0091127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi kish family protein Ksh1","termid":"PBO:0091127"}


id: PBO:0090633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Sap114","termid":"PBO:0090633"}


id: PBO:0064684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 20","termid":"PBO:0064684"}


id: PBO:0072494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 23","termid":"PBO:0072494"}


id: GO:0051564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the concentration of calcium ions in the smooth endoplasmic reticulum.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endoplasmic reticulum calcium ion concentration","termid":"GO:0032470"},{"relation_name":"is_a","term_name":"smooth endoplasmic reticulum calcium ion homeostasis","termid":"GO:0051563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"positive regulation of smooth endoplasmic reticulum calcium ion concentration","synonyms":[{"name":"elevation of calcium ion concentration in smooth endoplasmic reticulum","type":"exact"},{"name":"elevation of smooth ER calcium ion concentration","type":"exact"},{"name":"elevation of smooth endoplasmic reticulum calcium ion concentration","type":"exact"},{"name":"smooth endoplasmic reticulum calcium ion concentration elevation","type":"exact"}],"termid":"GO:0051564"}


id: PBO:0068065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 370","termid":"PBO:0068065"}


id: GO:0061912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The macroautophagy process in which specific structures are targeted by the autophagy process.","definition_xrefs":["PMID:20484971","PMID:21997368","PMID:22966490"],"gene_count":0,"genotype_count":0,"name":"obsolete selective autophagy (obsolete GO:0061912)","termid":"GO:0061912"}


id: PBO:0112996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor; GTPase of the Ras superfamily that regulates coated vesicle formation during intracellular trafficking within the Golgi; regulates mitochondrial fission, fusion and function, controlling the flow of fatty acids and metabolites from lipid droplets to peroxisomes and mitochondria; localizes to the Golgi apparatus and the active form to ER and lipid droplets; arf1 arf2 double null mutation is complemented by human ARF1, ARF4, ARF5, or ARF6","termid":"PBO:0112996"}


id: GO:0001560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which external signals modulate the frequency, rate or extent of cell growth, the irreversible increase in size of a cell over time.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"part_of","term_name":"cellular response to stimulus","termid":"GO:0051716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell growth by extracellular stimulus","synonyms":[{"name":"interpretation of external signals that regulate cell growth","type":"exact"},{"name":"regulation of cell growth by detection of exogenous stimulus","type":"exact"},{"name":"regulation of cell growth by sensing of exogenous stimulus","type":"exact"},{"name":"regulation of growth by exogenous signal","type":"exact"},{"name":"regulation of growth by exogenous stimuli","type":"exact"},{"name":"regulation of growth by exogenous stimulus","type":"exact"},{"name":"regulation of growth by external signal","type":"exact"},{"name":"regulation of growth by external stimuli","type":"exact"},{"name":"regulation of growth by external stimulus","type":"exact"}],"termid":"GO:0001560"}


id: GO:0102405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-taxifolin(1-) + O2 + NADPH(4-) + H+ = (+)-dihydromyricetin + NADP(3-) + H2O.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(+)-taxifolin 5'-hydroxylase activity","secondary_identifiers":["RHEA:61116","MetaCyc:RXN-13718"],"termid":"GO:0102405"}


id: GO:0080005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Adjustment of Photosystem I/Photosystem II ratio in response to light conditions. The function of photosystem stoichiometry adjustment is to compensate for any deficiency in energy conversion at either photosystem I or photosystem II by increasing the quantity the photosystem that will otherwise become the rate-limiting to overall photosynthesis.","definition_xrefs":["PMID:11607105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis","termid":"GO:0010109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"photosystem stoichiometry adjustment","termid":"GO:0080005"}


id: PBO:0060937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFE2 like bZIP transcription factor 1","termid":"PBO:0060937"}


id: GO:0035617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a stress granule into its constituent protein and RNA parts.","definition_xrefs":["GOC:BHF","PMID:19825938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex disassembly","termid":"GO:0032988"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stress granule disassembly","synonyms":[{"name":"SG disassembly","type":"exact"}],"termid":"GO:0035617"}


id: PBO:0039109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AHNAK nucleoprotein 2","termid":"PBO:0039109"}


id: GO:0090023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of neutrophil chemotaxis. Neutrophil chemotaxis is the directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of granulocyte chemotaxis","termid":"GO:0071624"},{"relation_name":"is_a","term_name":"regulation of neutrophil chemotaxis","termid":"GO:0090022"},{"relation_name":"is_a","term_name":"positive regulation of neutrophil migration","termid":"GO:1902624"},{"relation_name":"positively_regulates","term_name":"neutrophil chemotaxis","termid":"GO:0030593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil chemotaxis","termid":"GO:0090023"}


id: SO:0000388
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The Rev response element (RRE) is encoded within the HIV-env gene. Rev is an essential regulatory protein of HIV that binds an internal loop of the RRE leading, encouraging further Rev-RRE binding. This RNP complex is critical for mRNA export and hence for expression of the HIV structural proteins.","direct_ancestors":[{"relation_name":"is_a","term_name":"small_regulatory_ncRNA","termid":"SO:0000370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRE_RNA","synonyms":[{"name":"RRE RNA","type":"exact"}],"termid":"SO:0000388"}


id: GO:1905583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a mannose stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:16699509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hexose stimulus","termid":"GO:0071331"},{"relation_name":"is_a","term_name":"response to mannose","termid":"GO:1905582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to mannose","termid":"GO:1905583"}


id: GO:0090428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the perianth over time, from its formation to the mature structure. The perianth is a collective phyllome structure composed of two or more petals, sepals, or tepals.","definition_xrefs":["GOC:tb","PO:0009058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral whorl development","termid":"GO:0048438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perianth development","termid":"GO:0090428"}


id: GO:0005212
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the lens of an eye.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of eye lens","termid":"GO:0005212"}


id: GO:0005037
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete death receptor adaptor protein activity (obsolete GO:0005037)","synonyms":[{"name":"death receptor adaptor protein activity","type":"exact"}],"termid":"GO:0005037"}


id: PBO:0028865
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mRNA_level_during_vegetative_growth","termid":"PBO:0028865"}


id: PBO:0030759
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_mevastatin","termid":"PBO:0030759"}


id: PBO:0052009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JNK1/MAPK8 associated membrane protein","termid":"PBO:0052009"}


id: PBO:0091899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane high-affinity glucose:proton symporter Ght1","termid":"PBO:0091899"}


id: PBO:0001418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain protein Chp1","termid":"PBO:0001418"}


id: SO:0002325
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A splice_donor_variant (SO:0001575) that is degraded by nonsense-mediated decay (NMD).","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_donor_variant","termid":"SO:0001575"},{"relation_name":"is_a","term_name":"NMD_triggering_variant","termid":"SO:0002319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_donor_variant_NMD_triggering","synonyms":[{"name":"splice donor variant-NMD triggering","type":"exact"},{"name":"splice donor variant-nonsense-mediated decay triggering","type":"exact"}],"termid":"SO:0002325"}


id: GO:0035713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrogen dioxide (NO2) stimulus.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nitrogen dioxide","synonyms":[{"name":"response to NO2","type":"exact"}],"termid":"GO:0035713"}


id: FYPO:0004959
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the mitochondrion is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"},{"relation_name":"is_a","term_name":"normal mitochondrion","termid":"FYPO:0006034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal level of substance in mitochondrion","synonyms":[{"name":"normal level of substance in mitochondria","type":"exact"},{"name":"normal level of substance in mitochondrion during mitotic cell cycle","type":"related"},{"name":"normal level of substance in mitochondrion during vegetative growth","type":"exact"},{"name":"normal mitochondrial level of substance","type":"exact"}],"termid":"FYPO:0004959"}


id: PBO:0054515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1915","termid":"PBO:0054515"}


id: PBO:0070299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 5","termid":"PBO:0070299"}


id: PBO:0055446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2877","termid":"PBO:0055446"}


id: PBO:0001248
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.24.-","termid":"PBO:0001248"}


id: PBO:0046510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate rich 4","termid":"PBO:0046510"}


id: PBO:0005609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-fructofuranosidase","termid":"PBO:0005609"}


id: FYPO:0006833
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which primary cell septum biogenesis  begins at the normal (i.e. indistinguishable from wild type) time relative to other cell cycle events.","definition_xrefs":["GO:0031671","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal onset of primary cell septum biogenesis","synonyms":[{"name":"normal onset of primary cell septum biogenesis during mitotic cell cycle","type":"related"},{"name":"normal onset of primary cell septum biogenesis during vegetative growth","type":"exact"},{"name":"normal onset of primary cell septum formation","type":"exact"},{"name":"normal onset of primary septum biogenesis","type":"exact"},{"name":"normal onset of primary septum synthesis","type":"related"},{"name":"normal timing of primary cell septum biogenesis","type":"exact"}],"termid":"FYPO:0006833"}


id: PBO:0056646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 15 pseudogene 7","termid":"PBO:0056646"}


id: GO:0050330
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(5)-ethyl-L-glutamine + H2O = L-glutamate + ethylamine.","definition_xrefs":["RHEA:18013","EC:3.5.1.65"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"theanine hydrolase activity","secondary_identifiers":["KEGG_REACTION:R02930","MetaCyc:THEANINE-HYDROLASE-RXN"],"synonyms":[{"name":"5-N-ethyl-L-glutamine amidohydrolase activity","type":"related"},{"name":"L-theanine amidohydrolase activity","type":"related"},{"name":"N5-ethyl-L-glutamine amidohydrolase activity","type":"related"}],"termid":"GO:0050330"}


id: GO:0046575
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of acetylesters (as acetate) from galacturonic acid residues in the backbone of rhamnogalacturonan.","definition_xrefs":["PMID:10801485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylesterase activity","termid":"GO:0008126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"rhamnogalacturonan acetylesterase activity","termid":"GO:0046575"}


id: PBO:0045484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSCAM intronic transcript 1","termid":"PBO:0045484"}


id: PBO:0004826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Lea1 (predicted)","termid":"PBO:0004826"}


id: GO:0062120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components during meiotic prophase to form a LinE complex, the protein complex that associates with chromatin to form linear elements in fission yeast. In S. pombe, the LinE complex contains four main structural components (Rec10, Rec25, Rec27, and Mug20) and other associated proteins.","definition_xrefs":["PMID:30640914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"linear element assembly","termid":"GO:0030999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0140013","GO:0044085","GO:0007049","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"LinE complex assembly","termid":"GO:0062120"}


id: GO:1903826
data:
  {"annotated_genes":["SJAG_03400","SJAG_03256","SJAG_02716"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62738,94888],"is_not":false,"summary":null,"term":"GO:1903826"},{"annotations":[99915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"}]},"cv_name":"biological_process","definition":"The directed movement of L-arginine across a membrane.","definition_xrefs":["GOC:TermGenie","PMID:18357653","GO_REF:0000069","PMID:22822152","PMID:8195186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"},{"relation_name":"is_a","term_name":"basic amino acid transmembrane transport","termid":"GO:1990822"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02716":null,"SJAG_03256":null,"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"L-arginine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0043091","GO:1902023","GO:0015809","GO:1903400"],"synonyms":[{"name":"L-arginine import","type":"narrow"},{"name":"L-arginine transport","type":"broad"},{"name":"L-arginine uptake","type":"narrow"},{"name":"arginine transmembrane transport","type":"related"},{"name":"arginine transport","type":"broad"}],"termid":"GO:1903826","terms_by_termid":{"GO:0090518":null,"GO:1903826":null}}


id: GO:0018493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formylmethanofuran + A + H2O + H+ = AH(2) + CO2 + methanofuran.","definition_xrefs":["EC:1.2.7.12","RHEA:19841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"formylmethanofuran dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0345","KEGG_REACTION:R03015","MetaCyc:FORMYLMETHANOFURAN-DEHYDROGENASE-RXN"],"synonyms":[{"name":"formylmethanofuran:(acceptor) oxidoreductase activity","type":"related"},{"name":"formylmethanofuran:acceptor oxidoreductase activity","type":"related"}],"termid":"GO:0018493"}


id: PBO:0073610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siah E3 ubiquitin protein ligase 1 pseudogene 1","termid":"PBO:0073610"}


id: PBO:0111758
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK-related kinase family","termid":"PBO:0111758"}


id: PBO:0114112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1C complex WD repeat subunit Swd3","termid":"PBO:0114112"}


id: GO:0050803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the physical form or the activity of a synapse, the junction between a neuron and a target (neuron, muscle, or secretory cell).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of synapse structure or activity","termid":"GO:0050803"}


id: GO:0043448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an alkane, any acyclic branched or unbranched hydrocarbon having the general formula CnH2n+2.","definition_xrefs":["GOC:jl","Wikipedia:Alkane"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular alkane metabolic process","termid":"GO:0043446"},{"relation_name":"is_a","term_name":"cellular catabolic process","termid":"GO:0044248"},{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"alkane catabolic process","synonyms":[{"name":"alkane breakdown","type":"exact"},{"name":"alkane catabolism","type":"exact"},{"name":"alkane degradation","type":"exact"}],"termid":"GO:0043448"}


id: PBO:0031824
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_RNA_modification","termid":"PBO:0031824"}


id: PBO:0073818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 19","termid":"PBO:0073818"}


id: PBO:0109030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DHCR7 divergent transcript","termid":"PBO:0109030"}


id: PBO:0086901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transporter of the MRP subfamily; contains a stop codon in S288C; adjacent ORFs YKR103W and YKR104W are merged in different strain backgrounds; MRP stands for multidrug resistance-associated protein","termid":"PBO:0086901"}


id: GO:0072013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the glomus over time from its initial formation until its mature state. The glomus forms from the splanchnic intermediate mesoderm and is the vascularized filtration unit, filtering the blood before it enters the tubules. The glomus is external to the nephron and extends over more than one body segment.","definition_xrefs":["PMID:10572058","PMID:9268568","GOC:mtg_kidney_jan10","PMID:15647339","XAO:0000318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomus development","synonyms":[{"name":"pronephric glomus development","type":"exact"}],"termid":"GO:0072013"}


id: PBO:0027338
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_glutathione_level","termid":"PBO:0027338"}


id: GO:0046014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of resting T cell proliferation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell proliferation","termid":"GO:0042130"},{"relation_name":"is_a","term_name":"regulation of T cell homeostatic proliferation","termid":"GO:0046013"},{"relation_name":"negatively_regulates","term_name":"T cell homeostatic proliferation","termid":"GO:0001777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of T cell homeostatic proliferation","synonyms":[{"name":"down regulation of T cell homeostatic proliferation","type":"exact"},{"name":"down-regulation of T cell homeostatic proliferation","type":"exact"},{"name":"downregulation of T cell homeostatic proliferation","type":"exact"},{"name":"inhibition of T cell homeostatic proliferation","type":"narrow"},{"name":"negative regulation of T lymphocyte homeostatic proliferation","type":"exact"},{"name":"negative regulation of T-cell homeostatic proliferation","type":"exact"},{"name":"negative regulation of T-lymphocyte homeostatic proliferation","type":"exact"},{"name":"negative regulation of resting T cell proliferation","type":"exact"}],"termid":"GO:0046014"}


id: SO:0000195
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An exon whereby at least one base is part of a codon (here, 'codon' is inclusive of the stop_codon).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exon","termid":"SO:0000147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coding_exon","synonyms":[{"name":"coding exon","type":"exact"}],"termid":"SO:0000195"}


id: GO:0047899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formate + NADP+ = CO2 + NADPH.","definition_xrefs":["EC:1.17.1.10","RHEA:12000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"formate dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R00134","MetaCyc:FORMATE-DEHYDROGENASE-NADP+-RXN"],"synonyms":[{"name":"NADP-dependent formate dehydrogenase activity","type":"related"},{"name":"formate:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0047899"}


id: GO:0015440
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + peptide(in) = ADP + phosphate + peptide(out). Peptides exported include alpha-hemolysin, cyclolysin, colicin V and siderophores from Gram-negative bacteria, and bacteriocin, subtilin, competence factor and pediocin from Gram-positive bacteria.","definition_xrefs":["EC:7.4.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"},{"relation_name":"is_a","term_name":"peptide transmembrane transporter activity","termid":"GO:1904680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type peptide transporter activity","synonyms":[{"name":"peptide ABC transporter","type":"exact"},{"name":"ATP-dependent peptide transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled peptide transmembrane transporter activity","type":"related"},{"name":"peptide-transporting ATPase activity","type":"related"}],"termid":"GO:0015440"}


id: PBO:0088795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermediate peptidase Oct1","termid":"PBO:0088795"}


id: PBO:0061018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1","termid":"PBO:0061018"}


id: PBO:0003991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructokinase (predicted)","termid":"PBO:0003991"}


id: GO:0009905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-geranylgeranyl diphosphate = ent-copalyl diphosphate.","definition_xrefs":["EC:5.5.1.13","RHEA:14841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"ent-copalyl diphosphate synthase activity","secondary_identifiers":["KEGG_REACTION:R02068","MetaCyc:5.5.1.13-RXN"],"synonyms":[{"name":"diterpene cyclase activity","type":"broad"},{"name":"ent-copalyl-diphosphate lyase (decyclizing)","type":"related"},{"name":"ent-kaurene synthase A activity","type":"narrow"},{"name":"ent-kaurene synthetase A activity","type":"narrow"}],"termid":"GO:0009905"}


id: MOD:01598
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ8plex-117 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ8plex-117 reporter+balance reagent acylated residue","termid":"MOD:01556"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter fragment","termid":"MOD:01593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-117 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01598"}


id: PBO:0008948
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RIP1","termid":"PBO:0008948"}


id: PBO:0041511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 14 open reading frame 178","termid":"PBO:0041511"}


id: PBO:0089180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane magnesium ion transmembrane transporter Mrs2","termid":"PBO:0089180"}


id: PBO:0050650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 alpha family class A member 6, pseudogene","termid":"PBO:0050650"}


id: PBO:0011993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-dependent ATPase Rad54/Rhp54","termid":"PBO:0011993"}


id: PBO:0003376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim16 (predicted)","termid":"PBO:0003376"}


id: PBO:0003736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sm snRNP core protein Smd3","termid":"PBO:0003736"}


id: GO:0044126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont regulates the increase in its size or mass within the cells or tissues of the host organism. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down. The host is defined as the larger of the organisms involved in the symbiotic interaction.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of growth of symbiont in host (obsolete GO:0044126)","termid":"GO:0044126"}


id: GO:0010086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the embryonic root are generated and organized.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"root morphogenesis","termid":"GO:0010015"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic root morphogenesis","termid":"GO:0010086"}


id: PBO:0059468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutS homolog 6","termid":"PBO:0059468"}


id: SO:0000789
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a feature that has been proven.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"status","termid":"SO:0000905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"validated","termid":"SO:0000789"}


id: PBO:0034418
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_indirect_input_(obsolete_has_indirect_input)","termid":"PBO:0034418"}


id: PBO:0059601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 13","termid":"PBO:0059601"}


id: GO:0047900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + formate = ADP + formyl phosphate + H+.","definition_xrefs":["EC:2.7.2.6","RHEA:16009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"formate kinase activity","secondary_identifiers":["KEGG_REACTION:R00518","MetaCyc:FORMATE-KINASE-RXN"],"synonyms":[{"name":"ATP:formate phosphotransferase activity","type":"related"}],"termid":"GO:0047900"}


id: GO:0031811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a G protein-coupled (metabotropic) nucleotide receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled nucleotide receptor binding","synonyms":[{"name":"G-protein coupled nucleotide receptor binding","type":"exact"},{"name":"P2Y receptor binding","type":"exact"},{"name":"metabotropic nucleotide receptor binding","type":"exact"},{"name":"metabotropic nucleotide receptor ligand","type":"narrow"}],"termid":"GO:0031811"}


id: PBO:0076518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 20","termid":"PBO:0076518"}


id: GO:0102047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetate + glycine + ATP(4-) = H+ + indole-3-acetyl-glycine + AMP(2-) + diphosphoric acid.","definition_xrefs":["PMID:15659623","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"indole-3-acetyl-glycine synthetase activity","secondary_identifiers":["MetaCyc:RXN-10429"],"termid":"GO:0102047"}


id: FYPO:0002359
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in telomeric regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K9 dimethylation at telomere during vegetative growth","synonyms":[{"name":"normal histone H3-K9 dimethylation at telomere during mitotic cell cycle","type":"related"},{"name":"normal histone H3K9me2 at telomere during vegetative growth","type":"exact"},{"name":"normal telomeric histone H3-K9 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002359"}


id: FYPO:0007724
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the ERMES foci in a cell are normal (i.e. indistinguishable from wild type) in number, size, and distribution. An ERMES focus is a site that contains one or more ERMES complex(es).","definition_xrefs":["PomBase:mah","PMID:33483504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular physical quality phenotype","termid":"FYPO:0007723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal ERMES foci","synonyms":[{"name":"normal ERMES foci during mitotic cell cycle","type":"related"},{"name":"normal ERMES foci during vegetative growth","type":"exact"}],"termid":"FYPO:0007724"}


id: PR:P87319
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps1301 gene.","definition_xrefs":["UniProtKB:P87319","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 13a (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.01c","synonyms":[{"name":"Spom972h-vps1301","type":"exact"}],"termid":"PR:P87319"}


id: GO:0002568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The somatic process that results in the generation of sequence diversity of T cell receptor genes.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"},{"relation_name":"part_of","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic diversification of T cell receptor genes","synonyms":[{"name":"somatic diversification of TCR genes","type":"exact"}],"termid":"GO:0002568"}


id: GO:0072186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the metanephric cap are generated and organized. The metanephric cap is formed by the condensation of metanephric mesenchymal cells surrounding the ureteric bud tip.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metanephric mesenchyme morphogenesis","termid":"GO:0072133"},{"relation_name":"part_of","term_name":"metanephric cap development","termid":"GO:0072185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric cap morphogenesis","termid":"GO:0072186"}


id: PR:Q92341
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- str3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siderophore iron transporter 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F8.03c","synonyms":[{"name":"Spom972h-str3","type":"exact"}],"termid":"PR:Q92341"}


id: GO:0052715
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: mannosyl-diinositol phosphorylceramide + H2O = C26-phytoceramide + mannosyldiphosphorylinositol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphorylceramide phospholipase activity","termid":"GO:0052713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"mannosyl-diinositol phosphorylceramide phospholipase activity","termid":"GO:0052715"}


id: PBO:0067709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 7","termid":"PBO:0067709"}


id: PBO:0030800
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_cortical_microtubule_cytoskeleton_during_vegetative_growth","termid":"PBO:0030800"}


id: GO:0140655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The multiplication of mitochondria, resulting in the expansion of the number of mitochondria within a cell.","definition_xrefs":["PMID:28301064"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial proliferation (obsolete GO:0140655)","termid":"GO:0140655"}


id: PBO:0001695
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein destruction box","termid":"PBO:0001695"}


id: PBO:0036217
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_acetylation_during_vegetative_growth","termid":"PBO:0036217"}


id: GO:0090267
data:
  {"annotated_genes":["SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112769],"is_not":false,"summary":null,"term":"GO:0090267"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the mitotic cell cycle spindle assembly checkpoint, a cell cycle checkpoint that delays the metaphase/anaphase transition of a mitotic nuclear division until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["GOC:vw","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"positive regulation of spindle checkpoint","termid":"GO:0090232"},{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle spindle assembly checkpoint","termid":"GO:0090266"},{"relation_name":"positively_regulates","term_name":"mitotic spindle assembly checkpoint signaling","termid":"GO:0007094"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0044772","GO:0007049","GO:0023052","GO:0008150","GO:0000070"],"is_obsolete":false,"name":"positive regulation of mitotic cell cycle spindle assembly checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090267","terms_by_termid":{"GO:0090267":null}}


id: GO:0015594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + putrescine(out) -> ADP + phosphate + putrescine(in).","definition_xrefs":["EC:7.6.2.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type polyamine transporter activity","termid":"GO:0015417"},{"relation_name":"is_a","term_name":"putrescine transmembrane transporter activity","termid":"GO:0015489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ABC-type putrescine transporter activity","secondary_identifiers":["MetaCyc:ABC-25-RXN","EC:7.6.2.16","RHEA:29995"],"synonyms":[{"name":"ATPase-coupled putrescine transmembrane transporter activity","type":"related"},{"name":"putrescine porter activity","type":"broad"},{"name":"putrescine-importing ATPase activity","type":"narrow"}],"termid":"GO:0015594"}


id: PR:000050510
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the rec8 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec8 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC29A10.14","synonyms":[{"name":"SPBC29A10.14","type":"related"},{"name":"Spom-rec8","type":"exact"},{"name":"cohesin rec8 (Schizosaccharomyces pombe)","type":"exact"},{"name":"rec8","type":"related"}],"termid":"PR:000050510"}


id: PBO:0072190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 7","termid":"PBO:0072190"}


id: PBO:0082113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyl-CoA C-acetyltransferase (acetoacetyl-CoA thiolase); cytosolic enzyme that transfers an acetyl group from one acetyl-CoA molecule to another, forming acetoacetyl-CoA; involved in the first step in mevalonate biosynthesis; human ACAT1 functionally complements the growth defect caused by repression of ERG10 expression","termid":"PBO:0082113"}


id: GO:0044514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of G protein-coupled receptor activity in of the bitten organism.","definition_xrefs":["GOC:jl","PMID:8405712","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of G protein-coupled receptor activity in another organism","termid":"GO:0044513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in positive regulation of G protein-coupled receptor activity in another organism","synonyms":[{"name":"envenomation resulting in positive regulation of G protein-coupled receptor activity in other organism","type":"exact"},{"name":"envenomation resulting in positive regulation of G-protein coupled receptor activity in other organism","type":"exact"}],"termid":"GO:0044514"}


id: GO:1900348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methane biosynthetic process from methylamine.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"methane biosynthetic process from methylamine","termid":"GO:2001128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of methane biosynthetic process from methylamine","termid":"GO:1900348"}


id: PBO:0005271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Oca2","termid":"PBO:0005271"}


id: GO:0051171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving nitrogen or nitrogenous compounds.","definition_xrefs":["GOC:ai","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of nitrogen compound metabolic process (obsolete GO:0051171)","termid":"GO:0051171"}


id: PBO:0068050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 355","termid":"PBO:0068050"}


id: PBO:0036000
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_medial_cortical_node_condensation","termid":"PBO:0036000"}


id: PBO:0062255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily D member 2 pseudogene","termid":"PBO:0062255"}


id: PBO:0048384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating Rap/RanGAP domain like 3","termid":"PBO:0048384"}


id: GO:0047618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-benzoylagmatine + H2O = agmatine + benzoate.","definition_xrefs":["EC:3.5.1.40","RHEA:15065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"acylagmatine amidase activity","secondary_identifiers":["KEGG_REACTION:R01425","MetaCyc:ACYLAGMATINE-AMIDASE-RXN"],"synonyms":[{"name":"acylagmatine amidohydrolase activity","type":"related"},{"name":"acylagmatine deacylase activity","type":"related"},{"name":"benzoylagmatine amidohydrolase activity","type":"related"}],"termid":"GO:0047618"}


id: PBO:0045762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl-CoA hydratase domain containing 2","termid":"PBO:0045762"}


id: PBO:0002259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complex subunit Arp9","termid":"PBO:0002259"}


id: GO:0080144
data:
  {"annotated_genes":["SJAG_01471"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090465"},{"annotations":[92687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090464"},{"annotations":[92688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090463"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of amino acids within a cell.","definition_xrefs":["PMID:19955263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01471":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular amino acid homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"amino acid homeostasis","type":"broad"},{"name":"cellular amino acid homeostasis","type":"exact"}],"termid":"GO:0080144","terms_by_termid":{"GO:0090463":null,"GO:0090464":null,"GO:0090465":null}}


id: PBO:0054368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1762","termid":"PBO:0054368"}


id: PBO:0074638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 31","termid":"PBO:0074638"}


id: PBO:0069596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 873, pseudogene","termid":"PBO:0069596"}


id: PBO:0039604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic nuclear phosphoprotein 32 family member D","termid":"PBO:0039604"}


id: PBO:0079121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific 10 interacting protein","termid":"PBO:0079121"}


id: GO:1903455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of androst-4-ene-3,17-dione biosynthetic process.","definition_xrefs":["GO_REF:0000058","PMID:24399684","GOC:TermGenie","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid biosynthetic process","termid":"GO:0010894"},{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of androst-4-ene-3,17-dione biosynthetic process","termid":"GO:1903454"},{"relation_name":"negatively_regulates","term_name":"androst-4-ene-3,17-dione biosynthetic process","termid":"GO:1903449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of androst-4-ene-3,17-dione biosynthetic process","synonyms":[{"name":"down regulation of androst-4-ene-3,17-dione anabolism","type":"exact"},{"name":"down regulation of androst-4-ene-3,17-dione biosynthesis","type":"exact"},{"name":"down regulation of androst-4-ene-3,17-dione biosynthetic process","type":"exact"},{"name":"down regulation of androst-4-ene-3,17-dione formation","type":"exact"},{"name":"down regulation of androst-4-ene-3,17-dione synthesis","type":"exact"},{"name":"down regulation of androstenedione biosynthetic process","type":"exact"},{"name":"down-regulation of androst-4-ene-3,17-dione anabolism","type":"exact"},{"name":"down-regulation of androst-4-ene-3,17-dione biosynthesis","type":"exact"},{"name":"down-regulation of androst-4-ene-3,17-dione biosynthetic process","type":"exact"},{"name":"down-regulation of androst-4-ene-3,17-dione formation","type":"exact"},{"name":"down-regulation of androst-4-ene-3,17-dione synthesis","type":"exact"},{"name":"down-regulation of androstenedione biosynthetic process","type":"exact"},{"name":"downregulation of androst-4-ene-3,17-dione anabolism","type":"exact"},{"name":"downregulation of androst-4-ene-3,17-dione biosynthesis","type":"exact"},{"name":"downregulation of androst-4-ene-3,17-dione biosynthetic process","type":"exact"},{"name":"downregulation of androst-4-ene-3,17-dione formation","type":"exact"},{"name":"downregulation of androst-4-ene-3,17-dione synthesis","type":"exact"},{"name":"downregulation of androstenedione biosynthetic process","type":"exact"},{"name":"inhibition of androst-4-ene-3,17-dione anabolism","type":"narrow"},{"name":"inhibition of androst-4-ene-3,17-dione biosynthesis","type":"narrow"},{"name":"inhibition of androst-4-ene-3,17-dione biosynthetic process","type":"narrow"},{"name":"inhibition of androst-4-ene-3,17-dione formation","type":"narrow"},{"name":"inhibition of androst-4-ene-3,17-dione synthesis","type":"narrow"},{"name":"inhibition of androstenedione","type":"narrow"},{"name":"negative regulation of androst-4-ene-3,17-dione anabolism","type":"exact"},{"name":"negative regulation of androst-4-ene-3,17-dione biosynthesis","type":"exact"},{"name":"negative regulation of androst-4-ene-3,17-dione formation","type":"exact"},{"name":"negative regulation of androst-4-ene-3,17-dione synthesis","type":"exact"},{"name":"negative regulation of androstenedione biosynthetic process","type":"exact"}],"termid":"GO:1903455"}


id: PBO:0055886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC8C divergent transcript","termid":"PBO:0055886"}


id: PBO:0066244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif single stranded interacting protein 1 pseudogene 1","termid":"PBO:0066244"}


id: PBO:0058290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4665","termid":"PBO:0058290"}


id: GO:0010846
data:
  {"annotated_genes":["SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104037],"is_not":false,"summary":null,"term":"GO:0010846"}]},"cv_name":"biological_process","definition":"Any process that starts the inactive process of reciprocal meiotic recombination. Reciprocal meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of reciprocal meiotic recombination","termid":"GO:0010845"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0007049","GO:0140013","GO:0006259"],"is_obsolete":false,"name":"activation of reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of meiotic recombination","type":"related"}],"termid":"GO:0010846","terms_by_termid":{"GO:0010846":null}}


id: GO:0039694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The replication of a viral RNA genome.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral genome replication","termid":"GO:0019079"},{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral RNA genome replication","termid":"GO:0039694"}


id: GO:0038047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with morphine (17-methyl-7,8-didehydro-4,5alpha-epoxymorphinan-3,6alpha-diol), and transmitting the signal across the membrane by activating an associated G-protein.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled opioid receptor activity","termid":"GO:0004985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"morphine receptor activity","synonyms":[{"name":"mu-opioid receptor activity","type":"related"}],"termid":"GO:0038047"}


id: PBO:0052282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KDM7A divergent transcript","termid":"PBO:0052282"}


id: GO:1990794
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a cell situated by the cell sides which interface adjacent cells and near the base. Often used in reference to animal polarized epithelial cells.","definition_xrefs":["PMID:18495799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"basal part of cell","termid":"GO:0045178"},{"relation_name":"part_of","term_name":"lateral part of cell","termid":"GO:0097574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basolateral part of cell","termid":"GO:1990794"}


id: PBO:0079066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 2-1","termid":"PBO:0079066"}


id: PBO:0028666
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_anaphase-promoting_complex-dependent_proteasomal_ubiquitin-dependent_protein_catabolic_process","termid":"PBO:0028666"}


id: GO:0072639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-33 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","PMID:29778524","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-33 production","secondary_identifiers":["GO:0150126","GO:0072640"],"synonyms":[{"name":"C9orf26 production","type":"narrow"},{"name":"IL-33 production","type":"exact"},{"name":"IL1F11 production","type":"narrow"},{"name":"IL33 production","type":"exact"},{"name":"NF-HEV production","type":"exact"},{"name":"interleukin-33 biosynthetic process","type":"narrow"},{"name":"interleukin-33 secretion","type":"narrow"}],"termid":"GO:0072639"}


id: PBO:0074281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"slit guidance ligand 2","termid":"PBO:0074281"}


id: FYPO:0008215
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of GTPase inhibitor O1 than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003","FYPO:0002682","FYPO:0000139"],"is_obsolete":false,"name":"resistance to Rho GTPase inhibitor O1","termid":"FYPO:0008215"}


id: PBO:0055070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2487","termid":"PBO:0055070"}


id: GO:0002453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process contributing to anergy, a state of functional inactivation that occurs as part of tolerance induction, in peripheral B cells.","definition_xrefs":["ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell anergy","termid":"GO:0002515"},{"relation_name":"part_of","term_name":"peripheral B cell tolerance induction","termid":"GO:0002451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral B cell anergy","synonyms":[{"name":"peripheral B lymphocyte anergy","type":"exact"},{"name":"peripheral B-cell anergy","type":"exact"},{"name":"peripheral B-lymphocyte anergy","type":"exact"}],"termid":"GO:0002453"}


id: GO:1905278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of epithelial tube formation.","definition_xrefs":["GOC:TermGenie","GOC:bhm","PMID:25745997","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of epithelial tube formation","termid":"GO:1905276"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"positively_regulates","term_name":"epithelial tube formation","termid":"GO:0072175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelial tube formation","synonyms":[{"name":"activation of epithelial tube formation","type":"narrow"},{"name":"up regulation of epithelial tube formation","type":"exact"},{"name":"up-regulation of epithelial tube formation","type":"exact"},{"name":"upregulation of epithelial tube formation","type":"exact"}],"termid":"GO:1905278"}


id: PBO:0030481
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_GTP_binding","termid":"PBO:0030481"}


id: MOD:01879
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-cysteine residues, an L-arginine residue, an L-threonine residue and a copper atom to the methanobactin SB2 copper complex.","definition_xrefs":["RESID:AA0555","PubMed:20961038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper containing modified residue","termid":"MOD:00742"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methanobactin SB2 copper complex","synonyms":[{"name":"METAL copper [Cu-methanobactin SB2 complex]","type":"exact"},{"name":"[5-(hydroxy[sulfanyl-kappaS]methylene)-3,5-dihydro-4H-imidazol-4-onato-kappaN1][4-(hydroxy[sulfanyl-kappaS]methylene)-1,3-oxazol-5(4H)-onato-kappaN]copper","type":"exact"},{"name":"methanobactin SB2 copper complex","type":"exact"}],"termid":"MOD:01879"}


id: GO:0099162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neurotransmitter loading into synaptic vesicles.","definition_xrefs":["PMID:25176177","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter transport","termid":"GO:0051588"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle cycle","termid":"GO:0098693"},{"relation_name":"regulates","term_name":"neurotransmitter loading into synaptic vesicle","termid":"GO:0098700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"regulation of neurotransmitter loading into synaptic vesicle","synonyms":[{"name":"regulation of neurotransmitter uptake into synaptic vesicle","type":"exact"},{"name":"regulation of synaptic vesicle neurotransmitter loading","type":"exact"}],"termid":"GO:0099162"}


id: GO:0043649
data:
  {"annotated_genes":["SJAG_03434","SJAG_00937","SJAG_00714"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019266"},{"annotations":[107894],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[87762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006540"},{"annotations":[78511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006538"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dicarboxylic acids, any organic acid containing two carboxyl (-COOH) groups.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00714":null,"SJAG_00937":null,"SJAG_03434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"dicarboxylic acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"dicarboxylate catabolic process","type":"exact"},{"name":"dicarboxylate catabolism","type":"exact"},{"name":"dicarboxylic acid breakdown","type":"exact"},{"name":"dicarboxylic acid catabolism","type":"exact"},{"name":"dicarboxylic acid degradation","type":"exact"}],"termid":"GO:0043649","terms_by_termid":{"GO:0006533":null,"GO:0006538":null,"GO:0006540":null,"GO:0019266":null}}


id: PBO:0072287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 5","termid":"PBO:0072287"}


id: GO:1990207
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane protein complex capable of transporting positively charged hydrophobic drugs across the plasma membrane thereby involved in conferring resistance to a wide range of toxic compounds (e.g. methyl viologen, ethidium bromide and acriflavine). It is commonly found in bacteria. In E. coli it forms a homodimer.","definition_xrefs":["PMID:18024586","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"EmrE multidrug transporter complex","synonyms":[{"name":"EmrE complex","type":"narrow"}],"termid":"GO:1990207"}


id: PBO:0063797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate dehydrogenase","termid":"PBO:0063797"}


id: PBO:0039485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A8, pseudogene","termid":"PBO:0039485"}


id: PBO:0113161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp90 chaperone; functionally redundant with Hsc82p; required for pheromone signaling; negative regulator of the Hsf1p-dependent heat shock response with Cpr7p; docks with Tom70p for mitochondrial preprotein delivery; promotes telomerase DNA binding, nucleotide addition; promotes solubility of chaperone-substrate complexes; DNA damage induced nuclear import is Aha1p dependent; protein abundance increases in response to DNA replication stress; human homolog, HSP90AB1, complements null mutant","termid":"PBO:0113161"}


id: PATO:0001000
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001000 relative alternation (obsolete PATO:0001000)","termid":"PATO:0001000"}


id: GO:0120165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a perithecium over time, from its formation to the mature structure. Peritheicum is a flask-shaped fruiting body of certain molds and ascomycetous fungi having a pore for the escape of spores. In the ascomycetous fungi such as Neurospora crassa and Sordaria macrospora, these perithecia are formed in the sexual phase and they discharge ascospores through the ostiolum at the tip of the perithecial neck.","definition_xrefs":["PMID:19547974","PMID:20739093","PMID:25311923","DOI:10.1007/978-3-642-00286-1_2","PMID:125266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive fruiting body development","termid":"GO:0030582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perithecium development","termid":"GO:0120165"}


id: PBO:0053408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 343","termid":"PBO:0053408"}


id: PBO:0084188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone H1, linker histone with roles in meiosis and sporulation; decreasing levels early in sporulation may promote meiosis, and increasing levels during sporulation facilitate compaction of spore chromatin; binds to promoters and within genes in mature spores; may be recruited by Ume6p to promoter regions, contributing to transcriptional repression outside of meiosis; suppresses DNA repair involving homologous recombination","termid":"PBO:0084188"}


id: PATO:0001116
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001116 relative impulse value (obsolete PATO:0001116)","termid":"PATO:0001116"}


id: GO:0140321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of autophagy in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host autophagy","termid":"GO:0075071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"symbiont-mediated suppression of host autophagy","synonyms":[{"name":"negative regulation by symbiont of host autophagy","type":"exact"},{"name":"suppression of host autophagy","type":"exact"}],"termid":"GO:0140321"}


id: PBO:0079241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 14","termid":"PBO:0079241"}


id: PBO:0029715
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_absent_from_cell","termid":"PBO:0029715"}


id: GO:0034382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a chylomicron remnant is removed from the blood via receptor-mediated endocytosis into liver cells and its constituent parts degraded.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride-rich lipoprotein particle clearance","termid":"GO:0071830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chylomicron remnant clearance","termid":"GO:0034382"}


id: PBO:0069010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 254, pseudogene","termid":"PBO:0069010"}


id: PBO:0053200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte expansion molecule","termid":"PBO:0053200"}


id: PBO:0068678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 59, pseudogene","termid":"PBO:0068678"}


id: PBO:0087036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L17B; required for processing of 27SB pre-rRNA and formation of stable 66S assembly intermediates; homologous to mammalian ribosomal protein L17 and bacterial L22; RPL17B has a paralog, RPL17A, that arose from the whole genome duplication","termid":"PBO:0087036"}


id: GO:0090217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of the catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of 1-phosphatidylinositol-4-phosphate 5-kinase activity (obsolete GO:0090217)","termid":"GO:0090217"}


id: PR:Q9UTH5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1786.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTH5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase C1786.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1786.02","synonyms":[{"name":"Spom972h-SPAC1786.02","type":"exact"},{"name":"phospholipase B (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTH5"}


id: GO:0018524
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: acetophenone + CO2 = H+ + benzoyl acetate.","definition_xrefs":["UM-BBD_reactionID:r0033"],"gene_count":0,"genotype_count":0,"name":"obsolete acetophenone carboxylase activity (obsolete GO:0018524)","termid":"GO:0018524"}


id: PBO:0057897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3199-2","termid":"PBO:0057897"}


id: PBO:0113367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates lipolysis; inhibits oxidative damage induced by amphotericin B; overexpression increases flocculation, biofilm formation, invasive and pseudohyphal growth; ORF exhibits genomic organization compatible with a translational readthrough-dependent mode of expression; null mutant displays increased translation rate and increased readthrough of premature stop codons; TLD1 has a paralog, IRC23, that arose from the whole genome duplication","termid":"PBO:0113367"}


id: FYPO:0004268
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of septum disassembly is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum disassembly","termid":"FYPO:0000132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased septum disassembly","synonyms":[{"name":"decreased septum disassembly during mitotic cell cycle","type":"related"},{"name":"decreased septum disassembly during vegetative growth","type":"exact"},{"name":"reduced septum disassembly","type":"exact"}],"termid":"FYPO:0004268"}


id: PBO:0085007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of the glucose-sensing signal transduction pathway; required for repression of transcription by Rgt1p; interacts with Rgt1p and the Snf3p and Rgt2p glucose sensors; phosphorylated by Yck1p, triggering Mth1p degradation; MTH1 has a paralog, STD1, that arose from the whole genome duplication","termid":"PBO:0085007"}


id: GO:0033964
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of gangliosides and neutral glycosphingolipids, releasing fatty acids to form the lyso-derivatives.","definition_xrefs":["EC:3.5.1.69"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"glycosphingolipid deacylase activity","secondary_identifiers":["MetaCyc:3.5.1.69-RXN"],"synonyms":[{"name":"glycosphingolipid amidohydrolase activity","type":"related"},{"name":"glycosphingolipid ceramide deacylase activity","type":"broad"}],"termid":"GO:0033964"}


id: PBO:0073097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit D pseudogene 1","termid":"PBO:0073097"}


id: PBO:0028199
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_UV_during_mitotic_G1_phase","termid":"PBO:0028199"}


id: GO:0033554
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id: GO:0005038
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id: GO:0098795
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id: GO:0001049
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id: GO:0032274
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id: GO:0048940
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id: GO:0061058
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id: PBO:0053457
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id: GO:0015045
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id: PBO:0044075
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id: PR:Q9P3B2
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id: GO:1900166
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id: PBO:0005901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Tyrosine, mitochondrial","termid":"PBO:0005901"}


id: PBO:0067822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 124","termid":"PBO:0067822"}


id: FYPO:0006202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hydroxyurea is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal RNA level during cellular response to hydroxyurea","synonyms":[{"name":"normal RNA accumulation during cellular response to hydroxyurea","type":"related"},{"name":"normal RNA level during cellular response to HU","type":"exact"},{"name":"normal RNA level during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"normal mRNA level during cellular response to hydroxyurea","type":"narrow"},{"name":"normal transcript level during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0006202"}


id: PR:O74755
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pst3 gene.","definition_xrefs":["UniProtKB:O74755","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired amphipathic helix protein pst3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.16c","synonyms":[{"name":"SIN3 homolog 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pst3","type":"exact"}],"termid":"PR:O74755"}


id: GO:1902118
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to calcidiol.","definition_xrefs":["PMID:11799400","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D3 vitamins binding","termid":"GO:1902271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"calcidiol binding","synonyms":[{"name":"25(OH)D3 binding","type":"exact"},{"name":"25-hydroxycholecalciferol binding","type":"exact"},{"name":"25-hydroxyvitamin D3 binding","type":"exact"},{"name":"25OHD3 binding","type":"exact"},{"name":"calcifediol binding","type":"exact"}],"termid":"GO:1902118"}


id: PBO:0042163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 24","termid":"PBO:0042163"}


id: MOD:01909
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a residue to the 6x(13)C labeled 4-sulfophenyl isothiocyanate adduct, alpha-amino-[(4-sulfophenyl)carbamothioyl] residue.","definition_xrefs":["PubMed:16526082","PubMed:11467524","Unimod:464#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"6x(13)C labeled 4-sulfophenyl isothiocyanate derivatized residue","termid":"MOD:00880"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled 4-sulfophenyl isothiocyanate alpha-amino derivatized residue","synonyms":[{"name":"4-sulfophenyl isothiocyanate (Heavy C13)","type":"related"},{"name":"SPITC:13C(6)","type":"related"}],"termid":"MOD:01909"}


id: PBO:0047923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(11)(q13.3)","termid":"PBO:0047923"}


id: PBO:0057864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3175","termid":"PBO:0057864"}


id: PBO:0029627
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_sister_chromatid_cohesion","termid":"PBO:0029627"}


id: GO:0001987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is triggered by vasomotor excitation and results in a decrease in the diameter of an artery during the baroreceptor response to decreased blood pressure.","definition_xrefs":["ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasoconstriction","termid":"GO:0042310"},{"relation_name":"part_of","term_name":"baroreceptor response to decreased systemic arterial blood pressure","termid":"GO:0001982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasoconstriction of artery involved in baroreceptor response to lowering of systemic arterial blood pressure","termid":"GO:0001987"}


id: PBO:0041809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium responsive transcription factor","termid":"PBO:0041809"}


id: PBO:0064150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plakophilin 2 pseudogene 1","termid":"PBO:0064150"}


id: PBO:0057332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 520g","termid":"PBO:0057332"}


id: PBO:0059574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 2A","termid":"PBO:0059574"}


id: PBO:0071195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 36","termid":"PBO:0071195"}


id: PBO:0055066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2482","termid":"PBO:0055066"}


id: PBO:0002225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis CGR1 family (predicted)","termid":"PBO:0002225"}


id: GO:0044828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a host organism stops, prevents or reduces the frequency, rate or extent of viral genome replication.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation by host of viral process","termid":"GO:0044793"},{"relation_name":"is_a","term_name":"modulation by host of viral genome replication","termid":"GO:0044827"},{"relation_name":"negatively_regulates","term_name":"viral genome replication","termid":"GO:0019079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation by host of viral genome replication","termid":"GO:0044828"}


id: PBO:0070244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 185 pseudogene","termid":"PBO:0070244"}


id: PBO:0003266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit Mrp21 (predicted)","termid":"PBO:0003266"}


id: FYPO:0004969
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which vegetative cell population growth is cell population growth is normal (i.e. indistinguishable from wild type) under conditions of phosphate starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003","FYPO:0000139","FYPO:0002060","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"normal vegetative cell population growth during phosphate starvation","synonyms":[{"name":"normal vegetative cell population growth during phosphate depletion","type":"exact"},{"name":"normal vegetative cell population growth during phosphate deprivation","type":"exact"},{"name":"normal vegetative cell population growth during phosphate limitation","type":"exact"},{"name":"normal vegetative cell population growth in response to phosphate starvation","type":"exact"}],"termid":"FYPO:0004969"}


id: GO:0050970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events that contribute to magnetoception in which an electrical stimulus is received and converted into a molecular signal. The stimulus is in the form of an induced electric field resulting from movement in a magnetic field.","definition_xrefs":["Wikipedia:Magnetoception","GOC:ai","GOC:dph","GOC:dos","GOC:tb","PMID:15886990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of electrical stimulus involved in sensory perception","termid":"GO:0050963"},{"relation_name":"part_of","term_name":"magnetoreception by sensory perception of electrical stimulus","termid":"GO:0050978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of electrical stimulus involved in magnetoreception","synonyms":[{"name":"detection of electrical stimulus during magnetoreception","type":"related"},{"name":"magnetoception, sensory transduction of electrical stimulus","type":"exact"},{"name":"magnetoreception, detection of electrical stimulus","type":"exact"},{"name":"magnetoreception, sensory detection of electrical stimulus","type":"exact"},{"name":"magnetoreception, sensory transduction of electrical stimulus","type":"exact"},{"name":"sensory detection of electrical stimulus during magnetoreception","type":"related"},{"name":"sensory transduction of electrical stimulus during magnetoreception","type":"related"}],"termid":"GO:0050970"}


id: GO:0016008
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The larger of the two mitochondrial derivatives that arise by the unfolding of the Nebenkern during flagellum elongation; the major mitochondrial derivative is ovoid and darker than the minor derivative.","definition_xrefs":["PMID:24211517","GOC:mah","PMID:17123504","PMID:30802236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial derivative","termid":"GO:0016007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"major mitochondrial derivative","termid":"GO:0016008"}


id: PBO:0069342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 602, pseudogene","termid":"PBO:0069342"}


id: GO:0090316
data:
  {"annotated_genes":["SJAG_04464","SJAG_01245","SJAG_04312","SJAG_03048","SJAG_00906","SJAG_02592","SJAG_01805","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070863"},{"annotations":[107087,89874,97923,96511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[86915,90441,98461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of proteins within cells.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"positive regulation of protein transport","termid":"GO:0051222"},{"relation_name":"positively_regulates","term_name":"intracellular protein transport","termid":"GO:0006886"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00906":null,"SJAG_01245":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_04312":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of intracellular protein transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0090316","terms_by_termid":{"GO:0042307":null,"GO:0046827":null,"GO:0070863":null}}


id: GO:2001115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a methanopterin.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"pteridine-containing compound metabolic process","termid":"GO:0042558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"methanopterin-containing compound metabolic process","synonyms":[{"name":"methanopterin metabolism","type":"exact"}],"termid":"GO:2001115"}


id: PBO:0056432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 5","termid":"PBO:0056432"}


id: GO:0001198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mating-type specific process that stops, prevents or reduces the rate of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mating-type specific transcription from RNA polymerase II promoter (obsolete GO:0001198)","synonyms":[{"name":"down regulation of RNA polymerase II transcription, mating-type specific","type":"exact"},{"name":"down-regulation of RNA polymerase II transcription, mating-type specific","type":"exact"},{"name":"downregulation of RNA polymerase II transcription, mating-type specific","type":"exact"},{"name":"inhibition of RNA polymerase II transcription, mating-type specific","type":"narrow"}],"termid":"GO:0001198"}


id: GO:0046568
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methylbutanol + NAD(P)+ = 3-methylbutanal + NAD(P)H + H+. 3-methylbutanal is also known as isovaleraldehyde.","definition_xrefs":["EC:1.1.1.265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase [NAD(P)+] activity","termid":"GO:0018455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-methylbutanal reductase [NAD(P)H] activity","secondary_identifiers":["MetaCyc:1.1.1.265-RXN"],"synonyms":[{"name":"3-methylbutanal reductase [NAD(P)] activity","type":"related"},{"name":"3-methylbutanol:NAD(P) oxidoreductase activity","type":"exact"},{"name":"3-methylbutyraldehyde reductase activity","type":"exact"},{"name":"isoamyl alcohol oxidase activity","type":"exact"}],"termid":"GO:0046568"}


id: PBO:0055498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2932","termid":"PBO:0055498"}


id: GO:1904629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diterpene stimulus.","definition_xrefs":["GO_REF:0000071","PMID:19765580","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to diterpene","termid":"GO:1904629"}


id: PBO:0051708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase K","termid":"PBO:0051708"}


id: PBO:0088330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi multispanning membrane VanZ-like family protein","termid":"PBO:0088330"}


id: PBO:0055373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2802","termid":"PBO:0055373"}


id: GO:0019402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galactitol, the hexitol derived by the reduction of the aldehyde group of either D- or L-galactose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexitol metabolic process","termid":"GO:0006059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"galactitol metabolic process","synonyms":[{"name":"galactitol metabolism","type":"exact"}],"termid":"GO:0019402"}


id: GO:0035691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by macrophage migration inhibitory factor binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","PMID:19413900","GOC:BHF","PMID:12782713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"macrophage migration inhibitory factor signaling pathway","synonyms":[{"name":"MIF signaling pathway","type":"exact"},{"name":"macrophage migration inhibitory factor signalling pathway","type":"exact"}],"termid":"GO:0035691"}


id: GO:1900241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phenotypic switching.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of phenotypic switching","termid":"GO:1900239"},{"relation_name":"positively_regulates","term_name":"phenotypic switching","termid":"GO:0036166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phenotypic switching","synonyms":[{"name":"activation of phenotypic dimorphism","type":"related"},{"name":"activation of phenotypic switching","type":"narrow"},{"name":"positive regulation of phenotypic dimorphism","type":"related"},{"name":"up regulation of phenotypic dimorphism","type":"related"},{"name":"up regulation of phenotypic switching","type":"exact"},{"name":"up-regulation of phenotypic dimorphism","type":"related"},{"name":"up-regulation of phenotypic switching","type":"exact"},{"name":"upregulation of phenotypic dimorphism","type":"related"},{"name":"upregulation of phenotypic switching","type":"exact"}],"termid":"GO:1900241"}


id: PBO:0111878
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"octicosapeptide repeat","termid":"PBO:0111878"}


id: GO:0070669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-2 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-2","synonyms":[{"name":"response to IL-2","type":"exact"}],"termid":"GO:0070669"}


id: GO:0047077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + ATP + Photinus luciferin = light + diphosphate + AMP + CO2 + oxidized Photinus luciferin.","definition_xrefs":["MetaCyc:1.13.12.7-RXN","EC:1.13.12.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"},{"relation_name":"is_a","term_name":"luciferin monooxygenase activity","termid":"GO:0045289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"Photinus-luciferin 4-monooxygenase (ATP-hydrolyzing) activity","secondary_identifiers":["RHEA:10732"],"synonyms":[{"name":"Photinus luciferin 4-monooxygenase (adenosine triphosphate-hydrolyzing)","type":"related"},{"name":"Photinus pyralis luciferase activity","type":"related"},{"name":"Photinus-luciferin 4-monooxygenase (ATP-hydrolysing)","type":"related"},{"name":"Photinus-luciferin:oxygen 4-oxidoreductase (decarboxylating, ATP-hydrolysing)","type":"related"},{"name":"firefly luciferase activity","type":"related"},{"name":"firefly luciferin luciferase activity","type":"related"},{"name":"luciferase (firefly luciferin)","type":"related"},{"name":"luciferase activity","type":"broad"}],"termid":"GO:0047077"}


id: GO:0102909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NAD + 2-hydroxyglutarate = H+ + 2-oxoglutarate + NADH.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-ketoglutarate reductase activity (NADH-dependent) (obsolete GO:0102909)","termid":"GO:0102909"}


id: GO:0047972
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-guanidinopropanoate + H2O = beta-alanine + urea.","definition_xrefs":["EC:3.5.3.17","RHEA:16029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"guanidinopropionase activity","secondary_identifiers":["KEGG_REACTION:R00913","MetaCyc:GUANIDINOPROPIONASE-RXN"],"synonyms":[{"name":"3-guanidinopropanoate amidinopropionase activity","type":"related"},{"name":"GPH","type":"related"},{"name":"GPase activity","type":"related"}],"termid":"GO:0047972"}


