# terms

id: PBO:0064887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit Bbeta","termid":"PBO:0064887"}


id: PBO:0049292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 11, pseudogene","termid":"PBO:0049292"}


id: PBO:0039331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate lipoxygenase 3 pseudogene 1","termid":"PBO:0039331"}


id: GO:0102703
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate = (-)-camphene + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:4.2.3.117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"camphene synthase activity","secondary_identifiers":["MetaCyc:RXN-5142","RHEA:25484"],"termid":"GO:0102703"}


id: PATO:0000114
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000114 temperature sensitivity (obsolete PATO:0000114)","termid":"PATO:0000114"}


id: PBO:0034070
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-before_or_simultaneous_with","termid":"PBO:0034070"}


id: FYPO:0004310
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the duration of M phase of the mitotic cell cycle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle phase","termid":"FYPO:0002740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal duration of mitotic M phase","secondary_identifiers":["FYPO:0005632"],"synonyms":[{"name":"normal duration of M phase of mitotic cell cycle","type":"exact"},{"name":"normal duration of mitosis","type":"related"},{"name":"normal duration of mitosis during vegetative growth","type":"related"},{"name":"normal duration of mitotic division","type":"related"},{"name":"normal duration of mitotic nuclear division","type":"related"}],"termid":"FYPO:0004310"}


id: PBO:0113103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase, potent G-quadruplex DNA binder/unwinder; possesses strand annealing activity; promotes DNA synthesis during break-induced replication; involved in crossover recombination; works with Hrq1p to maintain telomere length homeostasis; translation from different start sites produces mitochondrial (DNA repair and recombination) and nuclear (catalytic inhibitor of telomerase) isoforms; mutations affect Zn, Fe homeostasis; regulated by Rad53p-dependent phosphorylation in rho0 cells","termid":"PBO:0113103"}


id: GO:2000552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of T-helper 2 cell cytokine production.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell cytokine production","termid":"GO:0002725"},{"relation_name":"is_a","term_name":"negative regulation of type 2 immune response","termid":"GO:0002829"},{"relation_name":"is_a","term_name":"regulation of T-helper 2 cell cytokine production","termid":"GO:2000551"},{"relation_name":"negatively_regulates","term_name":"T-helper 2 cell cytokine production","termid":"GO:0035745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of T-helper 2 cell cytokine production","synonyms":[{"name":"negative regulation of Th2 cell cytokine production","type":"exact"}],"termid":"GO:2000552"}


id: PBO:0069765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1048, pseudogene","termid":"PBO:0069765"}


id: FYPO:0002470
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to ionizing radiation","synonyms":[{"name":"decreased protein phosphorylation during cellular response to IR","type":"exact"},{"name":"decreased protein phosphorylation during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to IR","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0002470"}


id: PR:O43029
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-methyl-L-tryptophan oxidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02514"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-pipecolate oxidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.15","secondary_identifiers":["UniProtKB:O43029"],"synonyms":[{"name":"L-pipecolic acid oxidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-solA","type":"exact"}],"termid":"PR:O43029"}


id: PBO:0003682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit Ask1","termid":"PBO:0003682"}


id: PBO:0066849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 149","termid":"PBO:0066849"}


id: PBO:0031532
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine_amidase_activity","termid":"PBO:0031532"}


id: GO:0035107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of appendages are generated and organized. An appendage is an organ or part that is attached to the trunk of an organism, such as a limb or a branch.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"appendage development","termid":"GO:0048736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"appendage morphogenesis","termid":"GO:0035107"}


id: GO:1902674
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any ciliary basal body that is part of a right posteriolateral flagellum found in Giardia species (trophozoite stage).","definition_xrefs":["ISBN:9780124260207","GOC:giardia","GOC:TermGenie","GO_REF:0000064","PMID:16607022","PMID:5961344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary basal body","termid":"GO:0036064"},{"relation_name":"part_of","term_name":"right posteriolateral flagellum","termid":"GO:0097557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"right posteriolateral basal body","synonyms":[{"name":"cilial basal body of right posteriolateral cilium","type":"exact"},{"name":"cilial basal body of right posteriolateral flagellum","type":"exact"},{"name":"cilial basal body of right posterolateral cilium","type":"exact"},{"name":"cilial basal body of right posterolateral flagellum","type":"exact"},{"name":"ciliary basal body of right posteriolateral cilium","type":"exact"},{"name":"ciliary basal body of right posteriolateral flagellum","type":"exact"},{"name":"ciliary basal body of right posterolateral cilium","type":"exact"},{"name":"ciliary basal body of right posterolateral flagellum","type":"exact"},{"name":"cilium basal body of right posteriolateral cilium","type":"exact"},{"name":"cilium basal body of right posteriolateral flagellum","type":"exact"},{"name":"cilium basal body of right posterolateral cilium","type":"exact"},{"name":"cilium basal body of right posterolateral flagellum","type":"exact"},{"name":"microtubule basal body of right posteriolateral cilium","type":"exact"},{"name":"microtubule basal body of right posteriolateral flagellum","type":"exact"},{"name":"microtubule basal body of right posterolateral cilium","type":"exact"},{"name":"microtubule basal body of right posterolateral flagellum","type":"exact"},{"name":"right posteriolateral flagellum ciliary basal body","type":"exact"}],"termid":"GO:1902674"}


id: PBO:0004384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-3,4,5-trisphosphate3-phosphatasePtn1","termid":"PBO:0004384"}


id: PBO:0053374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 299","termid":"PBO:0053374"}


id: GO:0042317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any antibiotic that contains the condensed beta-lactamthiazolidine ring system.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic catabolic process","termid":"GO:0030655"},{"relation_name":"is_a","term_name":"penicillin metabolic process","termid":"GO:0042316"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0006790","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"penicillin catabolic process","synonyms":[{"name":"penicillin breakdown","type":"exact"},{"name":"penicillin catabolism","type":"exact"},{"name":"penicillin degradation","type":"exact"}],"termid":"GO:0042317"}


id: PBO:0113295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proteasome-associated ubiquitin receptor; K48-specific Ub chain binding protein that recruits substrates to the proteasome; subunit of nuclear excision repair factor 2 (NER2) with Rad4p that binds damaged DNA during NER, linking repair to proteolysis; NER2 binds DDR gene promoters to repress transcription in the absence of damage; stimulates Png1p-induced protein deglycosylation; contains a Ub-like (UBL) and two Ub-associated (UBA) domains; UBA2 protects Rad23p from proteasomal degradation","termid":"PBO:0113295"}


id: PBO:0083094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage checkpoint protein; part of a PCNA-like complex required for DNA damage response, required for pachytene checkpoint to inhibit cell cycle in response to unrepaired recombination intermediates; potential Cdc28p substrate; forms nuclear foci upon DNA replication stress","termid":"PBO:0083094"}


id: FYPO:0004349
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to methylglyoxal is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during cellular response to methylglyoxal","synonyms":[{"name":"decreased RNA accumulation during cellular response to methylglyoxal","type":"related"},{"name":"decreased RNA level during cellular response to methylglyoxal during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to methylglyoxal during vegetative growth","type":"exact"},{"name":"decreased transcript level during cellular response to methylglyoxal","type":"exact"},{"name":"reduced RNA level during cellular response to methylglyoxal","type":"exact"}],"termid":"FYPO:0004349"}


id: PBO:0077856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPM1 antisense RNA","termid":"PBO:0077856"}


id: PBO:0012534
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_morphogenesis_of","termid":"PBO:0012534"}


id: PR:Q9C0Y9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB24D3.03 gene.","definition_xrefs":["UniProtKB:Q9C0Y9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB24D3.03","synonyms":[{"name":"AUH 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAPB24D3.03","type":"exact"},{"name":"agmatine ureohydrolase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9C0Y9"}


id: GO:0021525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which differentiating motor neurons in the neural tube acquire the specialized structural and/or functional features of lateral motor column neurons. Lateral motor column neurons are generated only on limb levels and send axons into the limb mesenchyme. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:jid","PMID:11262869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spinal cord motor neuron differentiation","termid":"GO:0021522"},{"relation_name":"part_of","term_name":"somatic motor neuron differentiation","termid":"GO:0021523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral motor column neuron differentiation","termid":"GO:0021525"}


id: GO:0016202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of striated muscle development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle organ development","termid":"GO:0048634"},{"relation_name":"is_a","term_name":"regulation of muscle tissue development","termid":"GO:1901861"},{"relation_name":"regulates","term_name":"striated muscle tissue development","termid":"GO:0014706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of striated muscle tissue development","termid":"GO:0016202"}


id: PBO:0050681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 8","termid":"PBO:0050681"}


id: GO:0005181
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete glycopeptide hormone (obsolete GO:0005181)","synonyms":[{"name":"glycopeptide hormone","type":"exact"}],"termid":"GO:0005181"}


id: PR:Q9P544
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1635.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane protein porin (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1635.01","synonyms":[{"name":"Spom972h-SPAC1635.01","type":"exact"}],"termid":"PR:Q9P544"}


id: PBO:0044909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA fragmentation factor subunit alpha","termid":"PBO:0044909"}


id: PBO:0029764
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_double-strand_break_site","termid":"PBO:0029764"}


id: GO:0034538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-methylsalicylaldehyde + NAD+ = 3-methylsalicylate + NADH + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-methylsalicylaldehyde dehydrogenase activity (obsolete GO:0034538)","termid":"GO:0034538"}


id: PBO:0108619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGBP1 pseudogene 1","termid":"PBO:0108619"}


id: GO:0019817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a vesicle with the lipid bilayer membrane around the peroxisome.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"is_a","term_name":"peroxisome organization","termid":"GO:0007031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0007031"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150","GO:0007031","GO:0016192"],"is_obsolete":false,"name":"vesicle fusion with peroxisome","termid":"GO:0019817"}


id: GO:0106070
data:
  {"annotated_genes":["SJAG_02426","SJAG_02481","SJAG_02311","SJAG_01245","SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106072"},{"annotations":[96510,104038,88809,88145,112473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an adenylate cyclase-activating G protein-coupled receptor signaling pathway.","definition_xrefs":["GOC:hjd","PMID:19246489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0007189"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01245":null,"SJAG_02311":null,"SJAG_02426":null,"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of adenylate cyclase-activating G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0106070","terms_by_termid":{"GO:0106072":null,"GO:0110034":null}}


id: PBO:0058806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7848","termid":"PBO:0058806"}


id: PR:O13606
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mei4 gene.","definition_xrefs":["UniProtKB:O13606","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis-specific transcription factor mei4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.11","synonyms":[{"name":"Spom972h-mei4","type":"exact"}],"termid":"PR:O13606"}


id: PBO:0074522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A14","termid":"PBO:0074522"}


id: PR:P87157
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A target of Myb protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor-binding protein C25H2.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.16c","secondary_identifiers":["UniProtKB:P87157"],"synonyms":[{"name":"Spom972h-TOM1","type":"exact"}],"termid":"PR:P87157"}


id: PBO:0047483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 10","termid":"PBO:0047483"}


id: PATO:0000884
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000884 hybrid fertility value (obsolete PATO:0000884)","termid":"PATO:0000884"}


id: GO:0008043
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A ferritin complex located in the cell. Intracellular ferritin complexes contain 24 subunits, in a mixture of L (light) chains and H (heavy) chains.","definition_xrefs":["GOC:jl","PMID:19154717","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular ferritin complex (obsolete GO:0008043)","termid":"GO:0008043"}


id: PBO:0027543
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_mitochondria","termid":"PBO:0027543"}


id: PBO:0064592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member K, pseudogene","termid":"PBO:0064592"}


id: PBO:0059993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 13","termid":"PBO:0059993"}


id: GO:0035196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process leading to the generation of a functional miRNA. Includes the cleavage of stem-loop RNA precursors into microRNAs (miRNAs). miRNAs are a class of small RNAs that primarily silence genes by blocking the translation of mRNA transcripts into protein, or by increasing the degradation of non-protein-coding RNA transcripts.","definition_xrefs":["GOC:dph","GOC:tb","GOC:rl","PMID:23985560","PMID:15066283","PMID:28379604","GOC:bc","PMID:15066275","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA processing","termid":"GO:0070918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"miRNA processing","secondary_identifiers":["GO:0030918"],"synonyms":[{"name":"gene silencing by miRNA, production of miRNAs","type":"exact"},{"name":"miRNA biogenesis","type":"related"},{"name":"miRNA biosynthetic process","type":"broad"},{"name":"miRNA maturation","type":"exact"},{"name":"miRNA-mediated gene silencing, production of miRNAs","type":"exact"},{"name":"microRNA biogenesis","type":"exact"},{"name":"microRNA biosynthesis","type":"broad"},{"name":"microRNA biosynthetic process","type":"broad"},{"name":"microRNA metabolic process","type":"broad"},{"name":"microRNA metabolism","type":"broad"},{"name":"microRNA processing","type":"exact"},{"name":"microRNA-mediated gene silencing, production of microRNAs","type":"exact"},{"name":"production of miRNAs involved in gene silencing by miRNA","type":"exact"},{"name":"production of microRNAs involved in gene silencing by microRNA","type":"exact"}],"termid":"GO:0035196"}


id: PBO:0012034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex subunit Elp5 (predicted)","termid":"PBO:0012034"}


id: PBO:0073975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 31","termid":"PBO:0073975"}


id: FYECO:0000430
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in minimal medium where the medium contained trace amounts of glucose (<0.1%).","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MM with trace glucose","synonyms":[{"name":"minimal medium with trace glucose","type":"exact"},{"name":"very low glucose MM","type":"exact"}],"termid":"FYECO:0000430"}


id: PBO:0002053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-14 family","termid":"PBO:0002053"}


id: GO:0050199
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (E,E)-piperoyl-CoA + piperidine = N-[(E,E)-piperoyl]piperidine + CoA + H+.","definition_xrefs":["RHEA:14561","EC:2.3.1.145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"piperidine N-piperoyltransferase activity","secondary_identifiers":["MetaCyc:PIPERIDINE-N-PIPEROYLTRANSFERASE-RXN","KEGG_REACTION:R03994"],"synonyms":[{"name":"(E,E)-piperoyl-CoA:piperidine N-piperoyltransferase activity","type":"related"},{"name":"piperidine piperoyltransferase activity","type":"related"},{"name":"piperoyl-CoA:piperidine N-piperoyltransferase activity","type":"related"}],"termid":"GO:0050199"}


id: PBO:0027353
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_thiamine_level_during_stationary_phase","termid":"PBO:0027353"}


id: GO:1904831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of aortic smooth muscle cell differentiation.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:rph","GOC:TermGenie","GO_REF:0000058","PMID:22034194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aortic smooth muscle cell differentiation","termid":"GO:1904829"},{"relation_name":"is_a","term_name":"positive regulation of vascular associated smooth muscle cell differentiation","termid":"GO:1905065"},{"relation_name":"positively_regulates","term_name":"aortic smooth muscle cell differentiation","termid":"GO:0035887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aortic smooth muscle cell differentiation","synonyms":[{"name":"activation of aortic smooth muscle cell differentiation","type":"narrow"},{"name":"up regulation of aortic smooth muscle cell differentiation","type":"exact"},{"name":"up-regulation of aortic smooth muscle cell differentiation","type":"exact"},{"name":"upregulation of aortic smooth muscle cell differentiation","type":"exact"}],"termid":"GO:1904831"}


id: GO:0033228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cysteine from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid export across plasma membrane","termid":"GO:0032973"},{"relation_name":"is_a","term_name":"cysteine transmembrane transport","termid":"GO:1903712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"cysteine export across plasma membrane","synonyms":[{"name":"cysteine export","type":"broad"}],"termid":"GO:0033228"}


id: PBO:0036039
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein-protein_interaction","termid":"PBO:0036039"}


id: PBO:0073320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine incorporator 3","termid":"PBO:0073320"}


id: PBO:0003434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein (predicted), DUF1773 family protein 6","termid":"PBO:0003434"}


id: PBO:0064046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 80","termid":"PBO:0064046"}


id: PATO:0001113
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001113 absolute energy value (obsolete PATO:0001113)","termid":"PATO:0001113"}


id: PATO:0002467
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer resembling a thin narrow strip.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lathlike","termid":"PATO:0002467"}


id: PBO:0034423
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-condition_(obsolete_condition)","termid":"PBO:0034423"}


id: PR:000027538
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ste11 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor ste11","synonyms":[{"name":"STE11","type":"related"},{"name":"STEX","type":"related"},{"name":"ste11","type":"exact"}],"termid":"PR:000027538"}


id: GO:0035754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a B cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["CL:0000236","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte chemotaxis","termid":"GO:0048247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell chemotaxis","termid":"GO:0035754"}


id: PR:O74838
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf10 gene.","definition_xrefs":["UniProtKB:O74838","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.10","synonyms":[{"name":"Spom972h-wtf10","type":"exact"}],"termid":"PR:O74838"}


id: GO:0048077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of establishment of a pattern of pigment in the compound eye.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of eye pigmentation","termid":"GO:0048074"},{"relation_name":"is_a","term_name":"regulation of compound eye pigmentation","termid":"GO:0048076"},{"relation_name":"negatively_regulates","term_name":"compound eye pigmentation","termid":"GO:0048072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of compound eye pigmentation","synonyms":[{"name":"down regulation of eye pigmentation","type":"broad"},{"name":"down-regulation of eye pigmentation","type":"broad"},{"name":"downregulation of eye pigmentation","type":"broad"},{"name":"inhibition of eye pigmentation","type":"broad"},{"name":"negative regulation of eye pigmentation","type":"broad"}],"termid":"GO:0048077"}


id: SO:0000294
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence is complementarily repeated on the opposite strand. It is a palindrome, and it may, or may not be hyphenated. Examples: GCTGATCAGC, or GCTGA-----TCAGC.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted_repeat","secondary_identifiers":["http://en.wikipedia.org/wiki/Inverted_repeat"],"synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:inverted","type":"exact"},{"name":"inverted repeat","type":"exact"},{"name":"inverted repeat sequence","type":"exact"}],"termid":"SO:0000294"}


id: PR:P22987
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- kin1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P22987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase kin1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.06","synonyms":[{"name":"Spom972h-kin1","type":"exact"}],"termid":"PR:P22987"}


id: PBO:0070908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 16","termid":"PBO:0070908"}


id: PBO:0072462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 26","termid":"PBO:0072462"}


id: GO:0070023
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is formed by the association of a heterodimeric interleukin-12 receptor complex with an interleukin-12 heterodimer.","definition_xrefs":["PMID:11900991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"interleukin-12-interleukin-12 receptor complex","synonyms":[{"name":"IL12-IL12 receptor complex","type":"exact"},{"name":"IL12B-IL12RB1-IL12RB2 complex","type":"narrow"}],"termid":"GO:0070023"}


id: PBO:0067850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 152","termid":"PBO:0067850"}


id: PBO:0044836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 124","termid":"PBO:0044836"}


id: GO:0090627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a plant epidermal cell.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant epidermal cell differentiation","termid":"GO:0090627"}


id: PBO:0051135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-7","termid":"PBO:0051135"}


id: GO:0044299
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The axon of a dorsal root ganglion cell that are responsive to pain and temperature. C-fibers are small in diameter (0.2-1.5 um) and unmyelinated.","definition_xrefs":["NIF_Subcellular:nlx_subcell_20090210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"C-fiber","synonyms":[{"name":"C-fibre","type":"exact"}],"termid":"GO:0044299"}


id: PATO:0000923
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000923 relative width (obsolete PATO:0000923)","termid":"PATO:0000923"}


id: GO:0000746
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The union or introduction of genetic information from compatible mating types that results in a genetically different individual. Conjugation requires direct cellular contact between the organisms.","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete conjugation (obsolete GO:0000746)","secondary_identifiers":["Wikipedia:Conjugation"],"termid":"GO:0000746"}


id: GO:0051428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor for a peptide hormone.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone receptor binding","termid":"GO:0051427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"peptide hormone receptor binding","synonyms":[{"name":"polypeptide hormone receptor binding","type":"exact"}],"termid":"GO:0051428"}


id: MOD:01839
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links either two L-cysteine residues, or an L-cysteine residue and an L-serine residue by a thioether bond to form L-lanthionine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"},{"relation_name":"is_a","term_name":"lanthionine","termid":"MOD:01841"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lanthionine","termid":"MOD:01839"}


id: GO:0097364
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a channel that opens in response to a mechanical stress in the form of stretching, and contributing to the regulation of action potential.","definition_xrefs":["PMID:21290758","GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stretch-activated, monoatomic cation-selective, calcium channel activity","termid":"GO:0015275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"stretch-activated, monoatomic cation-selective, calcium channel activity involved in regulation of action potential","synonyms":[{"name":"stretch-activated, cation-selective, calcium channel activity involved in regulation of action potential","type":"broad"}],"termid":"GO:0097364"}


id: GO:0016804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of a N-terminal proline from a peptide.","definition_xrefs":["EC:3.4.11.5"],"gene_count":0,"genotype_count":0,"name":"obsolete prolyl aminopeptidase activity (obsolete GO:0016804)","synonyms":[{"name":"Pro-X aminopeptidase activity","type":"related"},{"name":"cytosol aminopeptidase V","type":"related"},{"name":"proline aminopeptidase","type":"broad"},{"name":"proline iminopeptidase activity","type":"exact"},{"name":"prolyl aminopeptidase activity","type":"exact"}],"termid":"GO:0016804"}


id: PBO:0031836
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_localization_during_vegetative_growth","termid":"PBO:0031836"}


id: PBO:0068253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 28S ribosomal N5","termid":"PBO:0068253"}


id: PBO:0071801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulation of nuclear pre-mRNA domain containing 1B","termid":"PBO:0071801"}


id: PBO:0000812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiolipin synthase/ hydrolase fusion protein (predicted)","termid":"PBO:0000812"}


id: PBO:0064660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A like 4C","termid":"PBO:0064660"}


id: GO:0031248
data:
  {"annotated_genes":["SJAG_03752","SJAG_00641","SJAG_04815","SJAG_04179","SJAG_04097","SJAG_03776","SJAG_02726","SJAG_06449","SJAG_03230","SJAG_01009","SJAG_00676","SJAG_03045","SJAG_04131","SJAG_02629","SJAG_02990","SJAG_02165","SJAG_02773","SJAG_04631","SJAG_00187","SJAG_02385","SJAG_01475","SJAG_01711","SJAG_02541","SJAG_01826","SJAG_01385","SJAG_04205","SJAG_00411","SJAG_04355","SJAG_03628","SJAG_02927","SJAG_00087","SJAG_00783","SJAG_03036","SJAG_01016","SJAG_05282","SJAG_00584","SJAG_02458","SJAG_04274","SJAG_03215","SJAG_00184","SJAG_03107","SJAG_03668","SJAG_04793","SJAG_02066","SJAG_00545","SJAG_01658","SJAG_03579","SJAG_00349","SJAG_02920","SJAG_03145","SJAG_04613","SJAG_03599","SJAG_03792"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[109227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043189"},{"annotations":[84505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000123"},{"annotations":[86821,101370,100503,95740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036410"},{"annotations":[85470,114066,112886,106488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031415"},{"annotations":[111427,98638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031416"},{"annotations":[108868,101550,99658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031417"},{"annotations":[90022,103990,101371,102572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033100"},{"annotations":[86822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990467"},{"annotations":[102939,93298,100782,97042,90076,105131,86759,109229,88429,95741,97757,90372,114654,95024,108315,111677,100115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035267"},{"annotations":[84419,111467,99441,113696,85353,103752,103397,102963,87469,109058,112373,93888,94572,84568,99695,101830,108627,110384,113647,107827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000124"},{"annotations":[62653,69895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046695"}]},"cv_name":"cellular_component","definition":"A complex that catalyzes the transfer of an acetyl group to a protein acceptor molecule.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"acetyltransferase complex","termid":"GO:1902493"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00184":null,"SJAG_00187":null,"SJAG_00349":null,"SJAG_00411":null,"SJAG_00545":null,"SJAG_00584":null,"SJAG_00641":null,"SJAG_00676":null,"SJAG_00783":null,"SJAG_01009":null,"SJAG_01016":null,"SJAG_01385":null,"SJAG_01475":null,"SJAG_01658":null,"SJAG_01711":null,"SJAG_01826":null,"SJAG_02066":null,"SJAG_02165":null,"SJAG_02385":null,"SJAG_02458":null,"SJAG_02541":null,"SJAG_02629":null,"SJAG_02726":null,"SJAG_02773":null,"SJAG_02920":null,"SJAG_02927":null,"SJAG_02990":null,"SJAG_03036":null,"SJAG_03045":null,"SJAG_03107":null,"SJAG_03145":null,"SJAG_03215":null,"SJAG_03230":null,"SJAG_03579":null,"SJAG_03599":null,"SJAG_03628":null,"SJAG_03668":null,"SJAG_03752":null,"SJAG_03776":null,"SJAG_03792":null,"SJAG_04097":null,"SJAG_04131":null,"SJAG_04179":null,"SJAG_04205":null,"SJAG_04274":null,"SJAG_04355":null,"SJAG_04613":null,"SJAG_04631":null,"SJAG_04793":null,"SJAG_04815":null,"SJAG_05282":null,"SJAG_06449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein acetyltransferase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031248","terms_by_termid":{"GO:0000123":null,"GO:0000124":null,"GO:0031415":null,"GO:0031416":null,"GO:0031417":null,"GO:0033100":null,"GO:0035267":null,"GO:0036410":null,"GO:0043189":null,"GO:0046695":null,"GO:1990467":null}}


id: GO:0048450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of floral organs. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:PO_curators","PO:0025395","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ morphogenesis","termid":"GO:0048444"},{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"flower structural organization","termid":"GO:0048461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral organ structural organization","secondary_identifiers":["GO:0048435"],"synonyms":[{"name":"floral organ structural organisation","type":"exact"}],"termid":"GO:0048450"}


id: GO:0035230
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A long, thin, polarized cell projection that contains actin and can extend for distances many times the diameter of the cell. Cytonemes represent extensions of cell cytoplasm and typically have a diameter of approximately 0.2um.","definition_xrefs":["PMID:10367889","PMID:10675901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cytoneme","secondary_identifiers":["Wikipedia:Membrane_nanotube"],"synonyms":[{"name":"membrane nanotube","type":"exact"}],"termid":"GO:0035230"}


id: GO:0042909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of acridine (10-azaanthracene), a heterocyclic ring compound found in crude coal-tar anthracene, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["Wikipedia:Acridine","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete acridine transport (obsolete GO:0042909)","termid":"GO:0042909"}


id: PR:O74428
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tco89 gene.","definition_xrefs":["UniProtKB:O74428","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C162.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC162.12","synonyms":[{"name":"Spom972h-tco89","type":"exact"}],"termid":"PR:O74428"}


id: PBO:0068384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF185 antisense RNA 1","termid":"PBO:0068384"}


id: GO:0031646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a neurophysiological process.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nervous system process","termid":"GO:0031644"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"nervous system process","termid":"GO:0050877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nervous system process","synonyms":[{"name":"activation of neurological process","type":"narrow"},{"name":"positive regulation of neurological process","type":"exact"},{"name":"positive regulation of neurological system process","type":"exact"},{"name":"positive regulation of neurophysiological process","type":"exact"},{"name":"stimulation of neurological process","type":"narrow"},{"name":"up regulation of neurological process","type":"exact"},{"name":"up-regulation of neurological process","type":"exact"},{"name":"upregulation of neurological process","type":"exact"}],"termid":"GO:0031646"}


id: FYPO:0006386
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that normally localizes to a compact region at the tip of a shmoo, or mating projection, is more dispersed than normal.","definition_xrefs":["PMID:19627505","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to shmoo tip","termid":"FYPO:0004802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"protein abnormally dispersed at shmoo tip","synonyms":[{"name":"abnormally dispersed protein localization at shmoo tip","type":"exact"},{"name":"protein abnormally dispersed at mating projection tip","type":"exact"},{"name":"protein abnormally dispersed at shmoo projection","type":"related"}],"termid":"FYPO:0006386"}


id: PBO:0070381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho associated coiled-coil containing protein kinase 2","termid":"PBO:0070381"}


id: PBO:0051305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR-3 (pseudogene)","termid":"PBO:0051305"}


id: GO:0008961
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the prospective N-terminal cysteine residue in an unmodified prolipoprotein.","definition_xrefs":["RHEA:56712","PMID:8051048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyltransferase activity","termid":"GO:0016757"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0140096","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity","secondary_identifiers":["EC:2.5.1.145"],"termid":"GO:0008961"}


id: FYPO:0002613
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation is normal at the mating type locus. All histone H2A phosphorylation may be assayed, or phosphorylation of specific sites on histone H2A may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H2A phosphorylation at mating type locus during vegetative growth","synonyms":[{"name":"normal histone H2A phosphorylation at mating type locus during mitotic cell cycle","type":"related"},{"name":"normal histone H2A phosphorylation at mating type region during vegetative growth","type":"exact"}],"termid":"FYPO:0002613"}


id: PBO:0084848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; homologous to bacterial L35 and human MRPL35 ribosomal proteins","termid":"PBO:0084848"}


id: PBO:0072477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 6","termid":"PBO:0072477"}


id: GO:0097175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1,6-anhydro-N-acetylmuramic acid, the 1,6-anhydro-derivative of N-acetyl-beta-muramic acid.","definition_xrefs":["PMID:15901686","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"1,6-anhydro-N-acetyl-beta-muramic acid metabolic process","termid":"GO:0097174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"1,6-anhydro-N-acetyl-beta-muramic acid catabolic process","synonyms":[{"name":"1,6-anhydro-N-acetyl-beta-muramate breakdown","type":"exact"},{"name":"1,6-anhydro-N-acetyl-beta-muramate catabolic process","type":"exact"},{"name":"1,6-anhydro-N-acetyl-beta-muramate catabolism","type":"exact"},{"name":"1,6-anhydro-N-acetyl-beta-muramate degradation","type":"exact"},{"name":"1,6-anhydro-N-acetyl-beta-muramic acid breakdown","type":"exact"},{"name":"1,6-anhydro-N-acetyl-beta-muramic acid catabolism","type":"exact"},{"name":"1,6-anhydro-N-acetyl-beta-muramic acid degradation","type":"exact"},{"name":"1,6-anhydro-N-acetylmuramate breakdown","type":"exact"},{"name":"1,6-anhydro-N-acetylmuramate catabolic process","type":"exact"},{"name":"1,6-anhydro-N-acetylmuramate catabolism","type":"exact"},{"name":"1,6-anhydro-N-acetylmuramate degradation","type":"exact"},{"name":"1,6-anhydro-N-acetylmuramic acid breakdown","type":"exact"},{"name":"1,6-anhydro-N-acetylmuramic acid catabolic process","type":"exact"},{"name":"1,6-anhydro-N-acetylmuramic acid catabolism","type":"exact"},{"name":"1,6-anhydro-N-acetylmuramic acid degradation","type":"exact"}],"termid":"GO:0097175"}


id: PBO:0057245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 449b","termid":"PBO:0057245"}


id: PBO:0002438
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence updated","termid":"PBO:0002438"}


id: GO:0031904
data:
  {"annotated_genes":["SJAG_02432"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031906"}]},"cv_name":"cellular_component","definition":"The volume enclosed by the membrane of an endosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular organelle lumen","termid":"GO:0070013"},{"relation_name":"part_of","term_name":"endosome","termid":"GO:0005768"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02432":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"}],"interesting_parent_ids":["GO:0005768","GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"endosome lumen","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao1547508851"],"termid":"GO:0031904","terms_by_termid":{"GO:0031906":null}}


id: GO:0017054
data:
  {"annotated_genes":["SJAG_03095","SJAG_00958"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86730,104565],"is_not":false,"summary":null,"term":"GO:0017054"}]},"cv_name":"cellular_component","definition":"A heterodimeric protein complex that can stably associate with TATA-binding protein on promoters, thereby preventing the assembly of transcription factors TFIIA and TFIIB and leading to repression of RNA polymerase II transcription. The two subunits, NC2alpha (Drap1) and NC2beta (Dr1), dimerize through histone fold domains of the H2A/H2B type present in the amino termini.","definition_xrefs":["PMID:15574413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription repressor complex","termid":"GO:0090571"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00958":null,"SJAG_03095":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"negative cofactor 2 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0017054","terms_by_termid":{"GO:0017054":null}}


id: GO:0050650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of chondroitin sulfate proteoglycan, any glycoprotein whose glycosaminoglycan units are chondroitin sulfate. Chondroitin sulfates are a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues; the repeat units consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan biosynthetic process","termid":"GO:0030166"},{"relation_name":"is_a","term_name":"chondroitin sulfate proteoglycan metabolic process","termid":"GO:0050654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chondroitin sulfate proteoglycan biosynthetic process","synonyms":[{"name":"chondroitin sulfate proteoglycan anabolism","type":"exact"},{"name":"chondroitin sulfate proteoglycan biosynthesis","type":"exact"},{"name":"chondroitin sulfate proteoglycan formation","type":"exact"},{"name":"chondroitin sulfate proteoglycan synthesis","type":"exact"},{"name":"chondroitin sulphate proteoglycan biosynthesis","type":"exact"},{"name":"chondroitin sulphate proteoglycan biosynthetic process","type":"exact"}],"termid":"GO:0050650"}


id: GO:0046761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral budding that starts with formation of a curvature in the host plasma membrane around which the virion particle assembles.","definition_xrefs":["VZ:1947","GOC:bf","ISBN:0072370319","PMID:9394621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-lytic viral release","termid":"GO:0046753"},{"relation_name":"is_a","term_name":"viral budding","termid":"GO:0046755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral budding from plasma membrane","secondary_identifiers":["GO:0046767","GO:0046766"],"synonyms":[{"name":"plasma membrane viral budding","type":"exact"},{"name":"plasma membrane viral budding during viral capsid envelopment","type":"related"},{"name":"viral budding from plasma membrane by viral capsid envelopment","type":"related"},{"name":"viral budding from plasma membrane during viral capsid envelopment","type":"related"},{"name":"virus budding from plasma membrane","type":"exact"},{"name":"virus budding from plasma membrane by viral capsid envelopment","type":"exact"},{"name":"virus budding from plasma membrane during viral capsid envelopment","type":"related"}],"termid":"GO:0046761"}


id: PBO:0054457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1854","termid":"PBO:0054457"}


id: PBO:0043325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC like kinase 2, pseudogene 1","termid":"PBO:0043325"}


id: PBO:0078277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 10-1","termid":"PBO:0078277"}


id: FYPO:0006429
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in subtelomeric regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation at subtelomeric heterochromatin during vegetative growth","termid":"FYPO:0005864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H3-K9 dimethylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"normal histone H3 K9 methylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at subtelomeres during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 methylation at telomeric heterochromatin during vegetative growth","type":"related"},{"name":"normal histone H3K9me2 at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 methylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0006429"}


id: PBO:0086149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for nuclear membrane fusion during karyogamy; localizes to the membrane with a soluble portion in the endoplasmic reticulum lumen, may form a complex with Jem1p and Kar2p; similar to zebrafish Brambleberry protein; expression of the gene is regulated by pheromone","termid":"PBO:0086149"}


id: GO:0048765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a root hair cell.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"root epidermal cell differentiation","termid":"GO:0010053"},{"relation_name":"is_a","term_name":"trichoblast maturation","termid":"GO:0048764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root hair cell differentiation","termid":"GO:0048765"}


id: SO:0001166
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non directional promoter motif with consensus sequence GAGAGCG.","definition_xrefs":["PMID:16827941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAGA_motif","synonyms":[{"name":"GAGA","type":"exact"},{"name":"GAGA motif","type":"exact"},{"name":"NDM1","type":"exact"}],"termid":"SO:0001166"}


id: PBO:0084804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; protein abundance increases in response to DNA replication stress","termid":"PBO:0084804"}


id: PBO:0048207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit epsilon","termid":"PBO:0048207"}


id: GO:0045735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Functions in the storage of nutritious substrates.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"nutrient reservoir activity","synonyms":[{"name":"storage protein","type":"related"},{"name":"storage protein of fat body","type":"related"},{"name":"yolk protein","type":"related"}],"termid":"GO:0045735"}


id: GO:0072009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the nephron epithelium over time, from its formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure. The nephron epithelium is a tissue that covers the surface of a nephron.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney epithelium development","termid":"GO:0072073"},{"relation_name":"part_of","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephron epithelium development","termid":"GO:0072009"}


id: FYPO:0007344
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the central core of the centromeric regions is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to centromere during vegetative growth","termid":"FYPO:0000451"},{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to chromatin at the centromere central core during vegetative growth","synonyms":[{"name":"increased protein localisation to centromere central core during vegetative growth","type":"exact"},{"name":"increased protein localization to centromere central core during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at centromere central core during mitotic cell cycle","type":"related"},{"name":"increased protein localization to chromatin at centromere central core during vegetative growth","type":"exact"},{"name":"increased protein localization to chromosome, centric central core","type":"exact"},{"name":"increased protein localization to chromosome, centromeric central core during vegetative growth","type":"exact"}],"termid":"FYPO:0007344"}


id: GO:0036362
data:
  {"annotated_genes":["SJAG_02626","SJAG_04236"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[113873,114230],"is_not":false,"summary":null,"term":"GO:0036362"}]},"cv_name":"cellular_component","definition":"A double layer of lipid molecules that surrounds an ascus, a capsule containing the sexual spores in some fungi.","definition_xrefs":["GOC:mcc","GOC:vw","PMID:21900489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02626":null,"SJAG_04236":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ascus membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0036362","terms_by_termid":{"GO:0036362":null}}


id: PBO:0039047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL5 intronic transcript 1","termid":"PBO:0039047"}


id: PBO:0083251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; identified by homology to a hemiascomycetous yeast protein","termid":"PBO:0083251"}


id: GO:0033979
data:
  {"annotated_genes":["SJAG_04754"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000495"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving box H/ACA type small nucleolar RNA.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA metabolic process","termid":"GO:0016074"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0016074","GO:0008150"],"is_obsolete":false,"name":"box H/ACA sno(s)RNA metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"box H/ACA sRNA metabolic process","type":"narrow"},{"name":"box H/ACA snoRNA metabolic process","type":"narrow"}],"termid":"GO:0033979","terms_by_termid":{"GO:0000495":null}}


id: GO:0032800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a receptor molecule, a macromolecule that undergoes combination with a hormone, neurotransmitter, drug or intracellular messenger to initiate a change in cell function.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor biosynthetic process (obsolete GO:0032800)","synonyms":[{"name":"receptor anabolism","type":"exact"},{"name":"receptor biosynthesis","type":"exact"},{"name":"receptor formation","type":"exact"},{"name":"receptor synthesis","type":"exact"}],"termid":"GO:0032800"}


id: PBO:0047516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciculation and elongation protein zeta 1","termid":"PBO:0047516"}


id: PBO:0083974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucose-repressible ADP-ribosylation factor; GTPase of Ras superfamily involved in regulating cell polarity and invasive growth; localizes to dynamic spots at plasma membrane and modulates PtdIns(4,5)P2 levels to facilitate endocytosis; required for localization of endocytic protein Lsb5p to correct cortical site in cells; also has mRNA binding activity; homolog of mammalian Arf6","termid":"PBO:0083974"}


id: PBO:0040038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"age-related maculopathy susceptibility 2","termid":"PBO:0040038"}


id: PBO:0062658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily C member 8","termid":"PBO:0062658"}


id: PBO:0054638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2043","termid":"PBO:0054638"}


id: GO:0072382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a vesicle towards the minus end of a microtubule, mediated by motor proteins. This process begins with the attachment of a vesicle to a microtubule, and ends when the vesicle reaches its final destination.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle transport along microtubule","termid":"GO:0047496"},{"relation_name":"is_a","term_name":"minus-end-directed organelle transport along microtubule","termid":"GO:0072385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"minus-end-directed vesicle transport along microtubule","synonyms":[{"name":"microtubule minus-end-directed vesicle distribution","type":"narrow"},{"name":"microtubule minus-end-directed vesicle localization","type":"exact"}],"termid":"GO:0072382"}


id: GO:0034323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a butyl group to an oxygen atom on the acceptor molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"},{"relation_name":"is_a","term_name":"butanoyltransferase activity","termid":"GO:0034326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"O-butanoyltransferase activity","termid":"GO:0034323"}


id: PBO:0030917
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_cell_morphology","termid":"PBO:0030917"}


id: PBO:0073809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 14","termid":"PBO:0073809"}


id: PBO:0055605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3043","termid":"PBO:0055605"}


id: PR:000045541
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-dependent kinase 1 (Schizosaccharomyces pombe) that has been phosphorylated on a Thr residue (Thr-167) within the T-Loop, and Tyr-15 within the ATP binding region. UniProtKB:P04551, Tyr-15, MOD:00048|Thr-167, MOD:00047.","definition_xrefs":["PomBase:MAH","PMID:26131711","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent kinase 1 (Schizosaccharomyces pombe)","termid":"PR:000036301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cdc2/Phos(Y15,T167)","pombase_gene_id":"SPBC11B10.09","synonyms":[{"name":"Cdc2 phosphorylated 2","type":"related"},{"name":"Cdc2-He","type":"exact"},{"name":"PomBase_original_PRO_term_name: cyclin-dependent kinase 1 phosphorylated 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cdc2/Phos:2","type":"exact"},{"name":"UniProtKB:P04551, Thr-167, MOD:00047|Tyr-15, MOD:00048","type":"exact"},{"name":"cdc2/Phos(Y15,T167)","type":"exact"}],"termid":"PR:000045541"}


id: GO:0019687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyruvate from other compounds, including acetate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate metabolic process","termid":"GO:0006083"},{"relation_name":"is_a","term_name":"pyruvate biosynthetic process","termid":"GO:0042866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyruvate biosynthetic process from acetate","synonyms":[{"name":"pyruvate anabolism from acetate","type":"exact"},{"name":"pyruvate formation from acetate","type":"exact"},{"name":"pyruvate synthesis from acetate","type":"exact"}],"termid":"GO:0019687"}


id: FYPO:0000126
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-3":{"allele_type":"other","description":"Pmk1 from S. pombe","gene_uniquename":"SJAG_04551","name":"Pmk1Sp","uniquename":"SJAG_04551:allele-3"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005152"},{"annotations":[115443,115469,115472,115458,115464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007521"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased resistance to a chemical stimulus. Resistance to a chemical is usually measured by determining the maximum concentration of the chemical at which a population of cells grow and divide, and cells are deemed resistant to a chemical if they survive at a concentration of the chemical that does not allow wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell population growth","termid":"FYPO:0001356"},{"relation_name":"is_a","term_name":"increased resistance to chemical","termid":"FYPO:0002682"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_04551":null},"genotype_count":6,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(Pmk1 from S. pombe)","display_uniquename":"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-3","expression":"Not assayed or wild type"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"increased resistance to chemical during vegetative growth","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_00610","SJAG_04551","SJAG_01787"],"single_locus_genotype_uniquenames":["pck1delta","pmk1delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","pck2delta"],"synonyms":[{"name":"increased resistance to chemical during mitotic cell cycle","type":"related"},{"name":"resistance to chemicals: increased during vegetative growth","type":"exact"},{"name":"resistant to chemical during vegetative growth","type":"exact"}],"termid":"FYPO:0000126","terms_by_termid":{"FYPO:0005152":null,"FYPO:0007521":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0006254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of CTP, cytidine 5'-triphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside triphosphate catabolic process","termid":"GO:0009210"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"CTP metabolic process","termid":"GO:0046036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"CTP catabolic process","synonyms":[{"name":"CTP breakdown","type":"exact"},{"name":"CTP catabolism","type":"exact"},{"name":"CTP degradation","type":"exact"},{"name":"CTP hydrolysis","type":"exact"}],"termid":"GO:0006254"}


id: GO:0070967
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to F420, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.","definition_xrefs":["GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"coenzyme F420 binding","termid":"GO:0070967"}


id: CHEBI:63317
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"The inorganic dichloride salt of barium.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"barium chloride","termid":"CHEBI:63317"}


id: PBO:0091280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial F1-FO ATP synthase chaperone Atp10","termid":"PBO:0091280"}


id: GO:0015773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of raffinose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Raffinose occurs in plants almost as commonly as sucrose and is present in cereal grains, cotton seeds, and many legumes. It is synthesized from sucrose by transfer of a galactopyranoside from myo-inositol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisaccharide transport","termid":"GO:2001088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"raffinose transport","termid":"GO:0015773"}


id: PATO:0001282
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of purple color and low saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purple","termid":"PATO:0000951"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desaturated purple","synonyms":[{"name":"pale purple","type":"exact"}],"termid":"PATO:0001282"}


id: GO:1990673
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the ERGIC membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["PMID:24119662","PMID:16038056","GOC:bhm"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of endoplasmic reticulum-Golgi intermediate compartment (ERGIC) membrane (obsolete GO:1990673)","synonyms":[{"name":"intrinsic component of endoplasmic reticulum-Golgi intermediate compartment membrane","type":"exact"}],"termid":"GO:1990673"}


id: PBO:0054909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2323","termid":"PBO:0054909"}


id: PBO:0054040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1376","termid":"PBO:0054040"}


id: PBO:0072956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stearoyl-CoA desaturase pseudogene 1","termid":"PBO:0072956"}


id: PBO:0073368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERTA domain containing 1","termid":"PBO:0073368"}


id: PBO:0032748
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylate pathway absent from pombe","termid":"PBO:0032748"}


id: PBO:0088617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTREC (exosome adaptor) complex zf-C2H2 type zinc finger subunit Pir2","termid":"PBO:0088617"}


id: PBO:0062928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 3-hydroxylase 1","termid":"PBO:0062928"}


id: SO:0000048
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"To substitute a subsection of sequence for another.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000048 substitute (obsolete SO:0000048)","termid":"SO:0000048"}


id: GO:0035497
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cyclic AMP response element (CRE), a short palindrome-containing sequence found in the promoters of genes whose expression is regulated in response to cyclic AMP.","definition_xrefs":["PMID:2875459","PMID:2900470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0000976","GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"cAMP response element binding","synonyms":[{"name":"CRE binding","type":"exact"},{"name":"cAMP-responsive element binding","type":"exact"},{"name":"cyclic AMP response element binding","type":"exact"},{"name":"cyclic-AMP response element binding","type":"exact"},{"name":"cyclic-AMP-responsive element binding","type":"exact"}],"termid":"GO:0035497"}


id: GO:2001196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lysine biosynthetic process via alpha-aminoadipate and saccharopine.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of amino acid biosynthetic process","termid":"GO:2000284"},{"relation_name":"is_a","term_name":"regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine","termid":"GO:2001194"},{"relation_name":"positively_regulates","term_name":"lysine biosynthetic process via alpha-aminoadipate and saccharopine","termid":"GO:0051975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"positive regulation of lysine biosynthetic process via alpha-aminoadipate and saccharopine","synonyms":[{"name":"positive regulation of lysine biosynthesis via aminoadipic acid and saccharopine","type":"exact"},{"name":"positive regulation of lysine biosynthetic process via aminoadipic acid and saccharopine","type":"exact"}],"termid":"GO:2001196"}


id: SO:0002073
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A position or feature within a sequence that is identical to the comparable position or feature of a specified reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_comparison","termid":"SO:0002072"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"no_sequence_alteration","synonyms":[{"name":"no sequence alteration","type":"exact"}],"termid":"SO:0002073"}


id: PBO:0067118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 163, pseudogene","termid":"PBO:0067118"}


id: PBO:0052076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1 like 1 pseudogene 1","termid":"PBO:0052076"}


id: PBO:0018046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Ubc15","termid":"PBO:0018046"}


id: GO:0014733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which skeletal muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. These adaptive events occur in both muscle fibers and associated structures (motoneurons and capillaries), and they involve alterations in regulatory mechanisms, contractile properties and metabolic capacities.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle adaptation","termid":"GO:0043502"},{"relation_name":"regulates","term_name":"skeletal muscle adaptation","termid":"GO:0043501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle adaptation","synonyms":[{"name":"regulation of skeletal muscle plasticity","type":"related"}],"termid":"GO:0014733"}


id: PBO:0042028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 85C","termid":"PBO:0042028"}


id: PBO:0081411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 263","termid":"PBO:0081411"}


id: PBO:0087874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional modulator; involved in regulation of meiosis, silencing, and expression of RNR genes; involved in response to replication stress; contains WD repeats; relocalizes to the cytosol in response to hypoxia; WTM2 has a paralog, UME1, that arose from the whole genome duplication","termid":"PBO:0087874"}


id: PBO:0053416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 354","termid":"PBO:0053416"}


id: GO:1904252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of bile acid metabolic process.","definition_xrefs":["GOC:bf","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"negative regulation of steroid metabolic process","termid":"GO:0045939"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of bile acid metabolic process","termid":"GO:1904251"},{"relation_name":"negatively_regulates","term_name":"bile acid metabolic process","termid":"GO:0008206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of bile acid metabolic process","synonyms":[{"name":"down regulation of bile acid metabolic process","type":"exact"},{"name":"down regulation of bile acid metabolism","type":"exact"},{"name":"down-regulation of bile acid metabolic process","type":"exact"},{"name":"down-regulation of bile acid metabolism","type":"exact"},{"name":"downregulation of bile acid metabolic process","type":"exact"},{"name":"downregulation of bile acid metabolism","type":"exact"},{"name":"inhibition of bile acid metabolic process","type":"narrow"},{"name":"inhibition of bile acid metabolism","type":"narrow"},{"name":"negative regulation of bile acid metabolism","type":"exact"}],"termid":"GO:1904252"}


id: PBO:0059638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 4","termid":"PBO:0059638"}


id: PBO:0082080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5' exoribonuclease required for 5' end processing of pre-60S rRNA; binds late pre-60S ribosomes, accompanying them from nucleolus to nuclear periphery; required for cell viability under standard (aerobic) conditions but not under anaerobic conditions; yeast null mutant is complemented by expression of human homolog NOL12","termid":"PBO:0082080"}


id: PR:Q9UU86
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A xenotropic and polytropic retrovirus receptor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10783:SF4","PRO:DNx","OMA:SCHPO05053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein SYG1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1827.07c","secondary_identifiers":["UniProtKB:Q9UU86"],"synonyms":[{"name":"Spom972h-XPR1","type":"exact"}],"termid":"PR:Q9UU86"}


id: PBO:0028782
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transposable_element-derived_small_RNA_level","termid":"PBO:0028782"}


id: PBO:0076305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptogyrin 2 pseudogene 1","termid":"PBO:0076305"}


id: PBO:0059963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 8","termid":"PBO:0059963"}


id: FYPO:0001052
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype in which a cell enters mitosis when smaller than wild type, and then septates to give rise to a cut phenotype. In a cut phenotype, a cell undergoes septation despite abnormal mitosis such that the septum physically divides the nucleus into two parts.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inviable small vegetative cell","termid":"FYPO:0000951"},{"relation_name":"has_part","term_name":"cut with abnormal chromosome segregation","termid":"FYPO:0003165"},{"relation_name":"is_a","term_name":"inviable small vegetative cell","termid":"FYPO:0000951"},{"relation_name":"is_a","term_name":"cut with abnormal chromosome segregation","termid":"FYPO:0003165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0000004","FYPO:0000032","FYPO:0000337","FYPO:0000641","FYPO:0005447","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"cut, small cell","synonyms":[{"name":"cut following advanced onset of mitosis","type":"exact"},{"name":"cut, small cell during mitotic cell cycle","type":"related"},{"name":"cut, small cell during vegetative growth","type":"exact"},{"name":"mitotic catastrophe with cut, small cell","type":"related"},{"name":"septation following abnormal nuclear division, small cell","type":"exact"},{"name":"small cut cell","type":"exact"}],"termid":"FYPO:0001052"}


id: GO:0044303
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any of the smaller branches of an axon that emanate from the main axon cylinder.","definition_xrefs":["NIF_Subcellular:sao1470140754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"axon collateral","termid":"GO:0044303"}


id: GO:0005705
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A stretch of less tightly packed chromatin along the polytene chromosome, found between bands.","definition_xrefs":["GOC:bf","PMID:11361342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal region","termid":"GO:0098687"},{"relation_name":"part_of","term_name":"polytene chromosome","termid":"GO:0005700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"polytene chromosome interband","termid":"GO:0005705"}


id: PBO:0002112
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. cerevisiae PN uptake is mediated by the unrelated transporter Tpn1p","termid":"PBO:0002112"}


id: GO:1904109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cholesterol import.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:16772292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cholesterol transport","termid":"GO:0032376"},{"relation_name":"is_a","term_name":"regulation of cholesterol import","termid":"GO:0060620"},{"relation_name":"positively_regulates","term_name":"cholesterol import","termid":"GO:0070508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cholesterol import","synonyms":[{"name":"activation of cholesterol import","type":"narrow"},{"name":"activation of cholesterol uptake","type":"narrow"},{"name":"positive regulation of cholesterol uptake","type":"exact"},{"name":"up regulation of cholesterol import","type":"exact"},{"name":"up regulation of cholesterol uptake","type":"exact"},{"name":"up-regulation of cholesterol import","type":"exact"},{"name":"up-regulation of cholesterol uptake","type":"exact"},{"name":"upregulation of cholesterol import","type":"exact"},{"name":"upregulation of cholesterol uptake","type":"exact"}],"termid":"GO:1904109"}


id: PBO:0047995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member L, pseudogene","termid":"PBO:0047995"}


id: GO:0060854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of the coordinated growth and sprouting of lymph vessels giving rise to the organized lymphatic system.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branching morphogenesis of an epithelial tube","termid":"GO:0048754"},{"relation_name":"part_of","term_name":"lymphangiogenesis","termid":"GO:0001946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching involved in lymph vessel morphogenesis","synonyms":[{"name":"patterning of lymph vessels","type":"broad"}],"termid":"GO:0060854"}


id: GO:0034986
data:
  {"annotated_genes":["SJAG_03862","SJAG_01418"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96644,109969],"is_not":false,"summary":null,"term":"GO:0034986"}]},"cv_name":"molecular_function","definition":"Directly binding to and delivering iron ions to a target protein.","definition_xrefs":["GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallochaperone activity","termid":"GO:0016530"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01418":null,"SJAG_03862":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0140104","GO:0003674"],"is_obsolete":false,"name":"iron chaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9866272","Reactome:R-HSA-9854405","Reactome:R-HSA-9854984"],"termid":"GO:0034986","terms_by_termid":{"GO:0034986":null}}


id: PBO:0086942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RanGTP-binding protein; inhibits RanGAP1 (Rna1p)-mediated GTP hydrolysis of RanGTP (Gsp1p); shares similarity to proteins in other fungi but not in higher eukaryotes","termid":"PBO:0086942"}


id: PBO:0068330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 34","termid":"PBO:0068330"}


id: GO:0075115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont modulates the frequency, rate or extent of host transmembrane receptor-mediated cAMP signal transduction. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host transmembrane receptor-mediated cAMP signal transduction (obsolete GO:0075115)","synonyms":[{"name":"modulation by symbiont of host transmembrane receptor-mediated cAMP signaling","type":"exact"}],"termid":"GO:0075115"}


id: PBO:0066351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA terminal phosphate cyclase like 1","termid":"PBO:0066351"}


id: PBO:0046139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A pseudogene 2","termid":"PBO:0046139"}


id: PBO:0062700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily E member 1","termid":"PBO:0062700"}


id: GO:0042416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopamine metabolic process","termid":"GO:0042417"},{"relation_name":"is_a","term_name":"catecholamine biosynthetic process","termid":"GO:0042423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dopamine biosynthetic process","synonyms":[{"name":"dopamine anabolism","type":"exact"},{"name":"dopamine biosynthesis","type":"exact"},{"name":"dopamine formation","type":"exact"},{"name":"dopamine synthesis","type":"exact"}],"termid":"GO:0042416"}


id: GO:0002711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of T cell mediated immunity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphocyte mediated immunity","termid":"GO:0002708"},{"relation_name":"is_a","term_name":"regulation of T cell mediated immunity","termid":"GO:0002709"},{"relation_name":"is_a","term_name":"positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002824"},{"relation_name":"positively_regulates","term_name":"T cell mediated immunity","termid":"GO:0002456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell mediated immunity","synonyms":[{"name":"activation of T cell mediated immunity","type":"narrow"},{"name":"positive regulation of T lymphocyte mediated immunity","type":"exact"},{"name":"positive regulation of T-cell mediated immunity","type":"exact"},{"name":"positive regulation of T-lymphocyte mediated immunity","type":"exact"},{"name":"stimulation of T cell mediated immunity","type":"narrow"},{"name":"up regulation of T cell mediated immunity","type":"exact"},{"name":"up-regulation of T cell mediated immunity","type":"exact"},{"name":"upregulation of T cell mediated immunity","type":"exact"}],"termid":"GO:0002711"}


id: FYPO:0006962
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of UDP-N-acetylglucosamine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular UDP-N-acetylglucosamine level","synonyms":[{"name":"increased UDP-N-acetylglucosamine accumulation","type":"related"},{"name":"increased cellular UDP-N-acetyl-alpha-D-glucosamine level","type":"exact"},{"name":"increased cellular UDP-N-acetylglucosamine level during mitotic cell cycle","type":"related"},{"name":"increased cellular UDP-N-acetylglucosamine level during vegetative growth","type":"exact"}],"termid":"FYPO:0006962"}


id: PBO:0090805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane anchored protein, claudin family, SUR7 subfamily, predicted membrane sensor Pun1","termid":"PBO:0090805"}


id: FYPO:0001319
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"711-723","gene_uniquename":"SJAG_01143","name":"mid1-delta(711-723 a.a.)","uniquename":"SJAG_01143:allele-2"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115569,115568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[115561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"},{"annotations":[115544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001007"},{"annotations":[115506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000644"},{"annotations":[115559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000596"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a specific cellular process is normal (i.e. indistinguishable from wild type) in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"},{"relation_name":"is_a","term_name":"normal vegetative phenotype","termid":"FYPO:0001312"},{"relation_name":"is_a","term_name":"cellular process phenotype during vegetative growth","termid":"FYPO:0001331"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null,"SJAG_04883":null},"genotype_count":5,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"mid1-delta(711-723 a.a.)(aa)","display_uniquename":"mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-2","expression":"Not assayed or wild type"}]}]},"ptp4delta":{"display_name":"ptp4delta","display_uniquename":"ptp4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04883:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03689","SJAG_02621","SJAG_03118"],"name":"normal cellular process during vegetative growth","references_by_uniquename":{"PMID:25866389":null,"PMID:35226668":null,"PMID:36695178":null},"single_locus_annotated_genes":["SJAG_03689","SJAG_01143","SJAG_04883"],"single_locus_genotype_uniquenames":["dcr1delta","ptp4delta","mid1-delta(711-723_a.a.)-711-723-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"normal cellular process during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001319","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000596":null,"FYPO:0000644":null,"FYPO:0001007":null,"FYPO:0006989":null,"FYPO_EXT:0000001":null}}


id: GO:0008692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-hydroxybutanoyl-CoA = (R)-3-hydroxybutanoyl-CoA.","definition_xrefs":["EC:5.1.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on hydroxy acids and derivatives","termid":"GO:0016856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-hydroxybutyryl-CoA epimerase activity","secondary_identifiers":["MetaCyc:OHBUTYRYL-COA-EPIM-RXN","RHEA:21760"],"synonyms":[{"name":"3-hydroxyacyl-CoA epimerase activity","type":"related"},{"name":"3-hydroxybutanoyl-CoA 3-epimerase activity","type":"related"},{"name":"3-hydroxybutyryl coenzyme A epimerase activity","type":"related"}],"termid":"GO:0008692"}


id: PBO:0046575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 17","termid":"PBO:0046575"}


id: PBO:0076072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STE20 related adaptor alpha","termid":"PBO:0076072"}


id: PBO:0039910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF9 intronic transcript 1","termid":"PBO:0039910"}


id: GO:0043114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent to which blood vessels can be pervaded by fluid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular process in circulatory system","termid":"GO:0003018"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"},{"relation_name":"part_of","term_name":"blood circulation","termid":"GO:0008015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular permeability","termid":"GO:0043114"}


id: PBO:0075627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shadow of prion protein","termid":"PBO:0075627"}


id: FYPO:0009078
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing ethanol as the carbon source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002058","FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0002060"],"is_obsolete":false,"name":"decreased cell population growth on ethanol carbon source","synonyms":[{"name":"decreased growth on ethanol carbon source","type":"broad"},{"name":"decreased vegetative cell growth on ethanol carbon source","type":"exact"},{"name":"reduced cell growth on ethanol carbon source","type":"related"},{"name":"slow cell growth on ethanol carbon source","type":"narrow"}],"termid":"FYPO:0009078"}


id: GO:1903075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of pyridoxine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:TermGenie","PMID:15701794","GO_REF:0000075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"pyridoxine transmembrane transport","termid":"GO:1903092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"pyridoxine import across plasma membrane","synonyms":[{"name":"pyridoxine import into cell","type":"exact"}],"termid":"GO:1903075"}


id: PBO:0046655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"establishment of sister chromatid cohesion N-acetyltransferase 2","termid":"PBO:0046655"}


id: PBO:0002034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA U17","termid":"PBO:0002034"}


id: FYPO:0004693
data:
  {"alleles_by_uniquename":{"SJAG_03720:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03720","name":"tel1delta","uniquename":"SJAG_03720:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115629],"is_not":false,"summary":null,"term":"FYPO:0004693"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable after exposure to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03720":null},"genotype_count":1,"genotypes_by_uniquename":{"tel1delta":{"display_name":"tel1delta","display_uniquename":"tel1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03720:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal viability following cellular response to hydroxyurea","references_by_uniquename":{"PMID:23090706":null},"single_locus_annotated_genes":["SJAG_03720"],"single_locus_genotype_uniquenames":["tel1delta"],"synonyms":[{"name":"normal cell population viability following cellular response to hydroxyurea","type":"exact"},{"name":"normal viability following HU exposure","type":"exact"},{"name":"normal viability following cellular response to HU","type":"exact"}],"termid":"FYPO:0004693","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0004693":null}}


id: PBO:0054188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1563","termid":"PBO:0054188"}


id: PBO:0072529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 59","termid":"PBO:0072529"}


id: PBO:0055908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 32","termid":"PBO:0055908"}


id: GO:0019595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of non-phosphorylated forms of glucose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose catabolic process","termid":"GO:0006007"},{"relation_name":"is_a","term_name":"non-phosphorylated glucose metabolic process","termid":"GO:0046430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"non-phosphorylated glucose catabolic process","synonyms":[{"name":"non-phosphorylated glucose breakdown","type":"exact"},{"name":"non-phosphorylated glucose catabolism","type":"exact"},{"name":"non-phosphorylated glucose degradation","type":"exact"}],"termid":"GO:0019595"}


id: GO:0043604
data:
  {"annotated_genes":["SJAG_01219","SJAG_00673","SJAG_00988","SJAG_00982","SJAG_00866","SJAG_04549","SJAG_04007","SJAG_02225","SJAG_00635","SJAG_02842","SJAG_02158","SJAG_01126","SJAG_03313","SJAG_02305","SJAG_02408","SJAG_00043","SJAG_02006","SJAG_03275","SJAG_01402","SJAG_00412","SJAG_00815","SJAG_00792","SJAG_04516","SJAG_04481","SJAG_01461","SJAG_01139","SJAG_04577","SJAG_03064","SJAG_04156","SJAG_01935","SJAG_02599","SJAG_02085","SJAG_00106","SJAG_03290","SJAG_01057","SJAG_03494","SJAG_03731","SJAG_03632","SJAG_03679","SJAG_00392","SJAG_00035","SJAG_04031","SJAG_01351","SJAG_05200","SJAG_03398","SJAG_04178","SJAG_02741","SJAG_04032"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94450,89317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006085"},{"annotations":[112183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[113141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[114550,83499,110318,104662,91073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[75045,110179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009102"},{"annotations":[105782,106142,87961,101603,104886,88841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046513"},{"annotations":[90175,90183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[104415,101002,86372,102142,108492,109760,100854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[104502,114255,89371,93090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006750"},{"annotations":[98239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070981"},{"annotations":[103543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[94429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001295"},{"annotations":[90130],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905569"},{"annotations":[94804,109455,94800,84966,98830],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015940"},{"annotations":[93091,93444,104503,89372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046938"},{"annotations":[95099],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010510"},{"annotations":[99525,106540,93423,107155,88517,109289,102579,94239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000050"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an amide, any derivative of an oxoacid in which an acidic hydroxy group has been replaced by an amino or substituted amino group.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":48,"genes_by_uniquename":{"SJAG_00035":null,"SJAG_00043":null,"SJAG_00106":null,"SJAG_00392":null,"SJAG_00412":null,"SJAG_00635":null,"SJAG_00673":null,"SJAG_00792":null,"SJAG_00815":null,"SJAG_00866":null,"SJAG_00982":null,"SJAG_00988":null,"SJAG_01057":null,"SJAG_01126":null,"SJAG_01139":null,"SJAG_01219":null,"SJAG_01351":null,"SJAG_01402":null,"SJAG_01461":null,"SJAG_01935":null,"SJAG_02006":null,"SJAG_02085":null,"SJAG_02158":null,"SJAG_02225":null,"SJAG_02305":null,"SJAG_02408":null,"SJAG_02599":null,"SJAG_02741":null,"SJAG_02842":null,"SJAG_03064":null,"SJAG_03275":null,"SJAG_03290":null,"SJAG_03313":null,"SJAG_03398":null,"SJAG_03494":null,"SJAG_03632":null,"SJAG_03679":null,"SJAG_03731":null,"SJAG_04007":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04156":null,"SJAG_04178":null,"SJAG_04481":null,"SJAG_04516":null,"SJAG_04549":null,"SJAG_04577":null,"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0043604","terms_by_termid":{"GO:0000050":null,"GO:0006085":null,"GO:0006086":null,"GO:0006750":null,"GO:0009102":null,"GO:0010510":null,"GO:0015940":null,"GO:0019427":null,"GO:0031169":null,"GO:0035338":null,"GO:0046513":null,"GO:0046656":null,"GO:0046938":null,"GO:0070981":null,"GO:1905569":null,"GO:1990181":null,"GO:2001295":null}}


id: PBO:0066530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP2 like and GRIP domain containing 5","termid":"PBO:0066530"}


id: PATO:0000642
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being merged with another entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fused with","synonyms":[{"name":"coalesced","type":"related"},{"name":"fused","type":"exact"},{"name":"fused to","type":"exact"},{"name":"joined with","type":"related"},{"name":"merged with","type":"related"}],"termid":"PATO:0000642"}


id: GO:0044132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The progression of a symbiont from an initial condition to a later condition, within the cells or tissues of its host organism.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete development of symbiont on or near host (obsolete GO:0044132)","termid":"GO:0044132"}


id: PBO:0055540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2976","termid":"PBO:0055540"}


id: PBO:0051198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3/OR16-16 (pseudogene)","termid":"PBO:0051198"}


id: PBO:0068746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5E small nuclear 1","termid":"PBO:0068746"}


id: PBO:0113541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar protein sorting (VPS) protein; required for cytoplasm to vacuole targeting of proteins; targeted to vacuole via AP-3 pathway; VPS62 has a paralog, TDA6, that arose from the whole genome duplication","termid":"PBO:0113541"}


id: GO:0050927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemotaxis","termid":"GO:0050921"},{"relation_name":"is_a","term_name":"regulation of positive chemotaxis","termid":"GO:0050926"},{"relation_name":"positively_regulates","term_name":"positive chemotaxis","termid":"GO:0050918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of positive chemotaxis","synonyms":[{"name":"activation of positive chemotaxis","type":"narrow"},{"name":"stimulation of positive chemotaxis","type":"narrow"},{"name":"up regulation of positive chemotaxis","type":"exact"},{"name":"up-regulation of positive chemotaxis","type":"exact"},{"name":"upregulation of positive chemotaxis","type":"exact"}],"termid":"GO:0050927"}


id: FYPO:0000928
data:
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id: PBO:0039343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALX homeobox 3","termid":"PBO:0039343"}


id: PBO:0050454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homer scaffold protein 2","termid":"PBO:0050454"}


id: PBO:0058211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4503","termid":"PBO:0058211"}


id: PATO:0001945
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A moderate yellow-orange to orange color.","definition_xrefs":["wordreference:wordreference"],"direct_ancestors":[{"relation_name":"is_a","term_name":"yellow orange","termid":"PATO:0001944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ochre","termid":"PATO:0001945"}


id: PBO:0080137
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasohibin 1","termid":"PBO:0080137"}


id: GO:0008289
data:
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id: PR:Q10427
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A maltodextrin glucosidase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04696","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized glycosyl hydrolase C11E10.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.09c","secondary_identifiers":["UniProtKB:Q10427"],"synonyms":[{"name":"Spom972h-malZ","type":"exact"}],"termid":"PR:Q10427"}


id: GO:0050293
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + testololactone = H+ + testolate.","definition_xrefs":["RHEA:13721","EC:3.1.1.37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"steroid-lactonase activity","secondary_identifiers":["MetaCyc:STEROID-LACTONASE-RXN","KEGG_REACTION:R03641"],"synonyms":[{"name":"testololactone lactonohydrolase activity","type":"related"}],"termid":"GO:0050293"}


id: GO:0060677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental growth in which the ureteric bud grows along its axis beginning with the growth of the primary ureteric bud and ending when the branches of the bud have elongated.","definition_xrefs":["GOC:dph","PMID:16916378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"ureteric bud morphogenesis","termid":"GO:0060675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureteric bud elongation","termid":"GO:0060677"}


id: PR:O60080
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX56 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO05031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase dbp9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1494.06c","secondary_identifiers":["UniProtKB:O60080"],"synonyms":[{"name":"Spom972h-DDX56","type":"exact"}],"termid":"PR:O60080"}


id: PBO:0061610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NudC domain containing 1","termid":"PBO:0061610"}


id: PBO:0061709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 pseudogene 4","termid":"PBO:0061709"}


id: PBO:0009485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog/2-OG-Fe(II) oxygenase family Abh1 (predicted)","termid":"PBO:0009485"}


id: PBO:0043065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor muscarinic 1","termid":"PBO:0043065"}


id: GO:0000455
data:
  {"annotated_genes":["SJAG_03755","SJAG_03572","SJAG_01172"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87269,88332,102289],"is_not":false,"summary":null,"term":"GO:0000455"}]},"cv_name":"biological_process","definition":"The intramolecular conversion of uridine to pseudouridine during ribosome biogenesis where the enzyme specifies the site that becomes pseudouridylated without using a guide RNA.","definition_xrefs":["GOC:curators","ISBN:1555811337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA pseudouridine synthesis","termid":"GO:0031118"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01172":null,"SJAG_03572":null,"SJAG_03755":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0042254","GO:0010467","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"enzyme-directed rRNA pseudouridine synthesis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000455","terms_by_termid":{"GO:0000455":null}}


id: GO:0034814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: benzo(a)pyrene-cis-7,8-dihydrodiol + O2 = cis-4-(7-hydroxypyren-8-yl)-2-oxobut-3-enoate.","definition_xrefs":["UM-BBD_reactionID:r1138"],"gene_count":0,"genotype_count":0,"name":"obsolete 7,8-dihydroxy benzo(a)pyrene dioxygenase activity (obsolete GO:0034814)","termid":"GO:0034814"}


id: PBO:0072983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schwannomin interacting protein 1","termid":"PBO:0072983"}


id: PBO:0090870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, iron ion","termid":"PBO:0090870"}


id: FYPO:0006561
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to a CDK-cyclin complex is normal (i.e. indistinguishable from wild type) during the G1 phase of the mitotic cell cycle. The protein whose binding to the CDK-cyclin complex is assayed may be encoded by the mutated gene, or may be encoded by a different gene.","definition_xrefs":["PMID:8521500","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex binding","termid":"FYPO:0005232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000702","FYPO:0000652"],"is_obsolete":false,"name":"normal CDK-cyclin complex binding during mitotic G1 phase","synonyms":[{"name":"normal CDK-cyclin complex binding during G1 phase during vegetative growth","type":"exact"},{"name":"normal CDK-cyclin complex binding during G1 phase of mitotic cell cycle","type":"exact"},{"name":"normal cyclin-CDK complex binding during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0006561"}


id: PBO:0029475
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_septated_spheroid_vegetative_cell","termid":"PBO:0029475"}


id: MOD:00596
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 4-(2-aminoethyl)benzenesulfonyl fluoride, AEBS.","definition_xrefs":["DeltaMass:235","Unimod:276","PubMed:8597590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfonyl halide reagent derivatized residue","termid":"MOD:01652"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-(2-aminoethyl)benzenesulfonyl fluoride derivatized residue","synonyms":[{"name":"AEBS","type":"related"},{"name":"AEBSF","type":"exact"},{"name":"Aminoethylbenzenesulfonylation","type":"related"}],"termid":"MOD:00596"}


id: PBO:0091875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translationally silent transcript from pho1 locus","termid":"PBO:0091875"}


id: PBO:0041378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C5","termid":"PBO:0041378"}


id: GO:1901708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (+)-3'-hydroxylarreatricin.","definition_xrefs":["GOC:TermGenie","PMID:12960376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan biosynthetic process","termid":"GO:0009807"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"(+)-3'-hydroxylarreatricin biosynthetic process","synonyms":[{"name":"(+)-3'-hydroxylarreatricin anabolism","type":"exact"},{"name":"(+)-3'-hydroxylarreatricin biosynthesis","type":"exact"},{"name":"(+)-3'-hydroxylarreatricin formation","type":"exact"},{"name":"(+)-3'-hydroxylarreatricin synthesis","type":"exact"}],"termid":"GO:1901708"}


id: PBO:0078986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA suppressor (anticodon CTA) 2-1","termid":"PBO:0078986"}


id: GO:0140755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a virus triggers host intracellular membranes to be reorganized, forming membranous webs, which are thought to be the site of replication or certain viruses, for example the HPV virus.","definition_xrefs":["PMID:34699787","PMID:4372566"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by virus of host cellular process","termid":"GO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reorganization of host cellular membranes to establish sites of replication","termid":"GO:0140755"}


id: PBO:0063330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 pseudogene 6","termid":"PBO:0063330"}


id: GO:0140211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: folic acid(out) + H+(out) = folic acid(in) + H+(in). The main folic acid symporter is the Proton-Coupled Folate Transporter (PCFT/SLC46A1), which has similar affinity for transport of reduced folates (5-methyl THF, 5-formyl THF) and folic acid.","definition_xrefs":["PMID:24745983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid transmembrane transporter activity","termid":"GO:0008517"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"folic acid:proton symporter activity","secondary_identifiers":["TC:2.A.1.50.1"],"termid":"GO:0140211"}


id: PBO:0000859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific UPF0300 family protein 1","termid":"PBO:0000859"}


id: PBO:0084429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major transcriptional repressor of DNA-damage-regulated genes; recruits repressors Tup1p and Cyc8p to their promoters; involved in DNA damage and replication checkpoint pathway; similar to a family of mammalian DNA binding RFX1-4 proteins","termid":"PBO:0084429"}


id: GO:0046673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of programmed cell death that occurs in the compound eye retina.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of compound eye retinal cell programmed cell death","termid":"GO:0046669"},{"relation_name":"is_a","term_name":"negative regulation of retinal cell programmed cell death","termid":"GO:0046671"},{"relation_name":"negatively_regulates","term_name":"compound eye retinal cell programmed cell death","termid":"GO:0046667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of compound eye retinal cell programmed cell death","synonyms":[{"name":"down regulation of retinal cell programmed cell death","type":"broad"},{"name":"down-regulation of retinal cell programmed cell death","type":"broad"},{"name":"downregulation of retinal cell programmed cell death","type":"broad"},{"name":"inhibition of retinal cell programmed cell death","type":"broad"},{"name":"negative regulation of retina cell programmed cell death","type":"broad"},{"name":"negative regulation of retinal cell programmed cell death","type":"broad"}],"termid":"GO:0046673"}


id: PBO:0075491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily F member 1","termid":"PBO:0075491"}


id: GO:0004190
data:
  {"annotated_genes":["SJAG_01968","SJAG_00254","SJAG_02260","SJAG_03420","SJAG_00784","SJAG_03763","SJAG_00109","SJAG_04583"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59766,78683,90921,90922,90923,94473,111686],"is_not":false,"summary":null,"term":"GO:0004190"},{"annotations":[90789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042500"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase activity","termid":"GO:0004175"},{"relation_name":"is_a","term_name":"aspartic-type peptidase activity","termid":"GO:0070001"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00109":null,"SJAG_00254":null,"SJAG_00784":null,"SJAG_01968":null,"SJAG_02260":null,"SJAG_03420":null,"SJAG_03763":null,"SJAG_04583":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008233","GO:0003674","GO:0003824","GO:0016787","GO:0140096"],"is_obsolete":false,"name":"aspartic-type endopeptidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2022403","Reactome:R-HSA-157640","Reactome:R-HSA-2220988","EC:3.4.23.-","Reactome:R-HSA-9017817","Reactome:R-HSA-2065357","Reactome:R-HSA-373705","Reactome:R-HSA-2022412","Reactome:R-HSA-9604294","Reactome:R-HSA-157353","Reactome:R-HSA-9013361"],"synonyms":[{"name":"aspartate protease activity","type":"narrow"},{"name":"aspartic endopeptidase activity","type":"exact"},{"name":"aspartic protease activity","type":"narrow"},{"name":"aspartyl protease activity","type":"narrow"},{"name":"carboxyl protease activity","type":"narrow"}],"termid":"GO:0004190","terms_by_termid":{"GO:0004190":null,"GO:0042500":null}}


id: PBO:0069038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 283, pseudogene","termid":"PBO:0069038"}


id: GO:1901637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of maintenance of presynaptic active zone structure.","definition_xrefs":["GOC:TermGenie","PMID:22426000"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of maintenance of presynaptic active zone structure (obsolete GO:1901637)","synonyms":[{"name":"activation of maintenance of presynaptic active zone structure","type":"narrow"},{"name":"positive regulation of maintenance of presynaptic active zone structure","type":"exact"},{"name":"up regulation of maintenance of presynaptic active zone structure","type":"exact"},{"name":"up-regulation of maintenance of presynaptic active zone structure","type":"exact"},{"name":"upregulation of maintenance of presynaptic active zone structure","type":"exact"}],"termid":"GO:1901637"}


id: GO:0030337
data:
  {"annotated_genes":["SJAG_04190","SJAG_01823"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100312,111493],"is_not":false,"summary":null,"term":"GO:0030337"}]},"cv_name":"molecular_function","definition":"An enzyme regulator activity that increases the processivity of polymerization by DNA polymerase, by allowing the polymerase to move rapidly along DNA while remaining topologically bound to it.","definition_xrefs":["PMID:8087839","PMID:7903401","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01823":null,"SJAG_04190":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0030234","GO:0098772","GO:0003674","GO:0140677"],"is_obsolete":false,"name":"DNA polymerase processivity factor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sliding clamp","type":"narrow"},{"name":"processivity clamp","type":"exact"}],"termid":"GO:0030337","terms_by_termid":{"GO:0030337":null}}


id: PBO:0077927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 antisense RNA 1","termid":"PBO:0077927"}


id: GO:0044210
data:
  {"annotated_genes":["SJAG_05024"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83867],"is_not":false,"summary":null,"term":"GO:0044210"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cytidine 5'-triphosphate (CTP) from simpler components.","definition_xrefs":["GOC:ecd","PMID:18439916","GOC:jl","PMID:11912132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CTP biosynthetic process","termid":"GO:0006241"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"'de novo' CTP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"'de novo' cytidine 5'-triphosphate biosynthetic process","type":"exact"}],"termid":"GO:0044210","terms_by_termid":{"GO:0044210":null}}


id: PBO:0073448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted frizzled related protein 2","termid":"PBO:0073448"}


id: GO:1902371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tRNA catabolic process.","definition_xrefs":["GOC:bf","GOC:TermGenie","PMID:22919049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA catabolic process","termid":"GO:1902369"},{"relation_name":"is_a","term_name":"regulation of tRNA catabolic process","termid":"GO:1902370"},{"relation_name":"is_a","term_name":"negative regulation of tRNA metabolic process","termid":"GO:1903327"},{"relation_name":"negatively_regulates","term_name":"tRNA decay","termid":"GO:0016078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006399"},{"rel_name":"negatively_regulates","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0006399"],"is_obsolete":false,"name":"negative regulation of tRNA catabolic process","synonyms":[{"name":"down regulation of tRNA breakdown","type":"exact"},{"name":"down regulation of tRNA catabolic process","type":"exact"},{"name":"down regulation of tRNA catabolism","type":"exact"},{"name":"down regulation of tRNA degradation","type":"exact"},{"name":"down-regulation of tRNA breakdown","type":"exact"},{"name":"down-regulation of tRNA catabolic process","type":"exact"},{"name":"down-regulation of tRNA catabolism","type":"exact"},{"name":"down-regulation of tRNA degradation","type":"exact"},{"name":"downregulation of tRNA breakdown","type":"exact"},{"name":"downregulation of tRNA catabolic process","type":"exact"},{"name":"downregulation of tRNA catabolism","type":"exact"},{"name":"downregulation of tRNA degradation","type":"exact"},{"name":"inhibition of tRNA breakdown","type":"narrow"},{"name":"inhibition of tRNA catabolic process","type":"narrow"},{"name":"inhibition of tRNA catabolism","type":"narrow"},{"name":"inhibition of tRNA degradation","type":"narrow"},{"name":"negative regulation of tRNA breakdown","type":"exact"},{"name":"negative regulation of tRNA catabolism","type":"exact"},{"name":"negative regulation of tRNA degradation","type":"exact"}],"termid":"GO:1902371"}


id: PBO:0079075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-iMet (anticodon CAT) 1-3","termid":"PBO:0079075"}


id: PBO:0033802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_double-strand_break_repair_via_homologous_recombination","termid":"PBO:0033802"}


id: PBO:0065843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB10, member RAS oncogene family","termid":"PBO:0065843"}


id: PBO:0001931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein involved in cytochrome c oxidase assembly Cox16 (predicted)","termid":"PBO:0001931"}


id: GO:0062145
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-glutamate + L-propargylglycine = ADP + H+ + L-gamma-glutamyl-L-propargylglycine + phosphate.","definition_xrefs":["PMID:30867596","RHEA:59896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"L-propargylglycine--L-glutamate ligase activity","termid":"GO:0062145"}


id: GO:0006109
data:
  {"annotated_genes":["SJAG_00963","SJAG_04509","SJAG_01402","SJAG_04771","SJAG_00685","SJAG_04668","SJAG_04462","SJAG_00610","SJAG_03705","SJAG_01376","SJAG_05006","SJAG_05314","SJAG_01787","SJAG_02278","SJAG_04666","SJAG_00534","SJAG_02785","SJAG_00698","SJAG_00424"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89039,107962],"is_not":false,"summary":null,"term":"GO:0006109"},{"annotations":[86997,77666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045719"},{"annotations":[74925,72107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[88474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060635"},{"annotations":[92649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001172"},{"annotations":[85769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"},{"annotations":[83590,88478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[83975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032951"},{"annotations":[88463,98924,101407,86839,113991,88480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"},{"annotations":[85515,91006,98926,88484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"},{"annotations":[95100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010906"},{"annotations":[85287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006110"},{"annotations":[74924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving carbohydrates.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"carbohydrate metabolic process","termid":"GO:0005975"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00534":null,"SJAG_00610":null,"SJAG_00685":null,"SJAG_00698":null,"SJAG_00963":null,"SJAG_01376":null,"SJAG_01402":null,"SJAG_01787":null,"SJAG_02278":null,"SJAG_02785":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05006":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of carbohydrate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of carbohydrate metabolism","type":"exact"}],"termid":"GO:0006109","terms_by_termid":{"GO:0006109":null,"GO:0006110":null,"GO:0010906":null,"GO:0032951":null,"GO:0043456":null,"GO:0045719":null,"GO:0045820":null,"GO:0060635":null,"GO:0070610":null,"GO:0090334":null,"GO:0140748":null,"GO:1905857":null,"GO:2001172":null}}


id: GO:2000517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T-helper 1 cell activation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of CD4-positive, alpha-beta T cell activation","termid":"GO:2000514"},{"relation_name":"regulates","term_name":"T-helper 1 cell activation","termid":"GO:0035711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T-helper 1 cell activation","synonyms":[{"name":"regulation of Th1 cell activation","type":"exact"}],"termid":"GO:2000517"}


id: PBO:0063297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily C, 4","termid":"PBO:0063297"}


id: PBO:0039150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AK3 pseudogene 5","termid":"PBO:0039150"}


id: PBO:0058587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6720","termid":"PBO:0058587"}


id: PR:Q10070
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mdm31 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial distribution and morphology protein 31 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.04c","synonyms":[{"name":"Spom972h-mdm31","type":"exact"}],"termid":"PR:Q10070"}


id: PBO:0046015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF2AK1 pseudogene 1","termid":"PBO:0046015"}


id: GO:0006377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete MATa1 (A1) pre-mRNA splicing (obsolete GO:0006377)","synonyms":[{"name":"MATa1 (A1) pre-mRNA splicing","type":"exact"}],"termid":"GO:0006377"}


id: PBO:0043050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcineurin like EF-hand protein 1","termid":"PBO:0043050"}


id: PBO:0059991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 11","termid":"PBO:0059991"}


id: PBO:0042630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 5 pseudogene","termid":"PBO:0042630"}


id: GO:0050934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a late stripe melanocyte (LSM). In zebrafish, LSMs develop during the second phase (3-4 weeks of development) of the larva-to-adult transition (2-4 weeks of development).","definition_xrefs":["PMID:11858836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocyte differentiation","termid":"GO:0030318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"late stripe melanocyte differentiation","synonyms":[{"name":"late stripe melanocyte cell differentiation","type":"exact"},{"name":"late stripe melanophore differentiation","type":"exact"}],"termid":"GO:0050934"}


id: PR:O13600
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sws1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM domain-containing protein sws1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.06","synonyms":[{"name":"SWIM domain-containing and srs2-interacting protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sws1","type":"exact"}],"termid":"PR:O13600"}


id: GO:2000398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of thymocyte aggregation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte cell-cell adhesion","termid":"GO:1903037"},{"relation_name":"regulates","term_name":"thymocyte aggregation","termid":"GO:0071594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of thymocyte aggregation","synonyms":[{"name":"regulation of T cell precursor aggregation","type":"exact"},{"name":"regulation of immature T cell aggregation","type":"related"},{"name":"regulation of immature T-cell aggregation","type":"related"},{"name":"regulation of immature T-lymphocyte aggregation","type":"exact"},{"name":"regulation of thymic lymphocyte aggregation","type":"exact"}],"termid":"GO:2000398"}


id: GO:0050956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive an electrical stimulus, convert it to a molecular signal, and recognize and characterize the signal. Many fish possess an electroception sense; for example, the electric eel uses low voltage pulses of electricity for navigation and prey location.","definition_xrefs":["PMID:10210663","Wikipedia:Electroreception","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of electrical stimulus","termid":"GO:0050952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"electroception","synonyms":[{"name":"electroception sense","type":"exact"},{"name":"electroceptive sense","type":"exact"}],"termid":"GO:0050956"}


id: PBO:0026811
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spores_sensitive_to_ethanol","termid":"PBO:0026811"}


id: PR:000045546
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2B-alpha (Schizosaccharomyces pombe) that has been monoubiquitinated on the most C-terminal Lys residue. Example: UniProtKB:P04913-1, Lys-120, PR:000044771.","definition_xrefs":["PomBase:MAH","PRO:CNA","PMID:27098497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2B-alpha (Schizosaccharomyces pombe)","termid":"PR:000045547"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"htb1/MonoUbiq(K119)","pombase_gene_id":"SPCC622.09","secondary_identifiers":["PR:000036916"],"synonyms":[{"name":"PomBase_original_PRO_term_name: histone H2B-alpha ubiquitinated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-htb1/Ubiq:1","type":"exact"},{"name":"htb1/MonoUbiq(K119)","type":"exact"},{"name":"htb1/MonoUbiq:(K120)","type":"exact"},{"name":"uH2B","type":"related"}],"termid":"PR:000045546"}


id: PBO:0081079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type containing 11","termid":"PBO:0081079"}


id: PBO:0084168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly conserved subunit of the mitochondrial pyruvate carrier (MPC); expressed during growth on nonfermentable carbon sources, and heterodimerizes with Mpc1p to form the respiratory isoform of MPC; MPC localizes to the mitochondrial inner membrane and mediates pyruvate uptake; MPC3 paralog, MPC2, heterodimerizes with Mpc1p to form the fermentative MPC isoform; protein abundance increases in response to DNA replication stress","termid":"PBO:0084168"}


id: GO:1902632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of membrane hyperpolarization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23223304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of membrane hyperpolarization","termid":"GO:1902630"},{"relation_name":"positively_regulates","term_name":"membrane hyperpolarization","termid":"GO:0060081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of membrane hyperpolarization","synonyms":[{"name":"activation of membrane hyperpolarization","type":"narrow"},{"name":"up regulation of membrane hyperpolarization","type":"exact"},{"name":"up-regulation of membrane hyperpolarization","type":"exact"},{"name":"upregulation of membrane hyperpolarization","type":"exact"}],"termid":"GO:1902632"}


id: GO:1902395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of 1-deoxy-D-xylulose-5-phosphate synthase activity.","definition_xrefs":["PMID:23612965","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of 1-deoxy-D-xylulose-5-phosphate synthase activity (obsolete GO:1902395)","synonyms":[{"name":"regulation of 1-deoxy-D-xylulose-5-phosphate pyruvate-lyase (carboxylating) activity","type":"exact"},{"name":"regulation of 1-deoxyxylulose-5-phosphate synthase activity","type":"exact"},{"name":"regulation of DOXP synthase activity","type":"exact"},{"name":"regulation of DXP-synthase activity","type":"exact"},{"name":"regulation of pyruvate:D-glyceraldehyde-3-phosphate acetaldehydetransferase (decarboxylating)","type":"exact"}],"termid":"GO:1902395"}


id: PBO:0053316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 32","termid":"PBO:0053316"}


id: PR:Q9P3T7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial 2-oxodicarboxylate carrier that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01456","PANTHER:PTHR24089:SF76"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 2-oxodicarboxylate carrier (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.09","secondary_identifiers":["UniProtKB:Q9P3T7"],"synonyms":[{"name":"Spom972h-SLC25A21","type":"exact"}],"termid":"PR:Q9P3T7"}


id: SO:0001505
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A collection of sequences (often chromosomes) taken as the standard for a given organism and genome assembly.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genome","termid":"SO:0001026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reference_genome","synonyms":[{"name":"reference genome","type":"related"}],"termid":"SO:0001505"}


id: PBO:0028340
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cyclin-dependent_protein_kinase_activity","termid":"PBO:0028340"}


id: PBO:0064332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid scramblase 2","termid":"PBO:0064332"}


id: PR:O14155
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UPF0047 protein YjbQ that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0047 protein C4A8.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.02c","secondary_identifiers":["UniProtKB:O14155"],"synonyms":[{"name":"Spom972h-yjbQ","type":"exact"}],"termid":"PR:O14155"}


id: GO:1904262
data:
  {"annotated_genes":["SJAG_01983","SJAG_02765","SJAG_00169","SJAG_02231","SJAG_05346","SJAG_03501","SJAG_00875","SJAG_01184","SJAG_04910","SJAG_03089","SJAG_03720","SJAG_03799","SJAG_01142","SJAG_03072","SJAG_03678","SJAG_00209","SJAG_03355","SJAG_04249","SJAG_03486","SJAG_00457","SJAG_00991","SJAG_00824"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84101,89391,90243,92171,94942,95639,97521,99088,101192,103218,103468,105333,105743,107032,109242,110064,110657,112217,112323,112576,113134,114306],"is_not":false,"summary":null,"term":"GO:1904262"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of TORC1 signaling.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:25366275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of TOR signaling","termid":"GO:0032007"},{"relation_name":"is_a","term_name":"regulation of TORC1 signaling","termid":"GO:1903432"},{"relation_name":"negatively_regulates","term_name":"TORC1 signaling","termid":"GO:0038202"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00457":null,"SJAG_00824":null,"SJAG_00875":null,"SJAG_00991":null,"SJAG_01142":null,"SJAG_01184":null,"SJAG_01983":null,"SJAG_02231":null,"SJAG_02765":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03355":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03678":null,"SJAG_03720":null,"SJAG_03799":null,"SJAG_04249":null,"SJAG_04910":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of TORC1 signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of TORC1 signal transduction","type":"exact"},{"name":"down regulation of TORC1 signaling","type":"exact"},{"name":"down-regulation of TORC1 signal transduction","type":"exact"},{"name":"down-regulation of TORC1 signaling","type":"exact"},{"name":"downregulation of TORC1 signal transduction","type":"exact"},{"name":"downregulation of TORC1 signaling","type":"exact"},{"name":"inhibition of TORC1 signal transduction","type":"narrow"},{"name":"inhibition of TORC1 signaling","type":"narrow"},{"name":"negative regulation of TORC1 signal transduction","type":"exact"}],"termid":"GO:1904262","terms_by_termid":{"GO:1904262":null}}


id: GO:1905767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of double-stranded telomeric DNA binding.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:BHF","PMID:18812185","GOC:BHF_telomere","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of telomeric DNA binding","termid":"GO:1904742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of double-stranded telomeric DNA binding","termid":"GO:1905767"}


id: PBO:0081405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF252P antisense RNA 1","termid":"PBO:0081405"}


id: GO:0052097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a community of single-celled organisms of different species monitors population density by detecting the concentration of small diffusible signal molecules.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete interspecies quorum sensing (obsolete GO:0052097)","termid":"GO:0052097"}


id: GO:1904885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a beta-catenin destruction complex.","definition_xrefs":["GOC:PARL","GO_REF:0000079","GOC:bf","GOC:TermGenie","PMID:17143292","PMID:23169527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"beta-catenin destruction complex assembly","synonyms":[{"name":"23S APC complex assembly","type":"narrow"},{"name":"23S APC complex formation","type":"narrow"},{"name":"APC-Axin-1-beta-catenin complex assembly","type":"exact"},{"name":"APC-Axin-1-beta-catenin complex formation","type":"exact"},{"name":"Axin-APC-beta-catenin-GSK3B complex assembly","type":"exact"},{"name":"Axin-APC-beta-catenin-GSK3B complex formation","type":"exact"},{"name":"BDC assembly","type":"exact"},{"name":"BDC formation","type":"exact"},{"name":"beta-catenin degradation complex assembly","type":"exact"},{"name":"beta-catenin degradation complex formation","type":"exact"},{"name":"beta-catenin destruction complex formation","type":"exact"},{"name":"destruction complex formation","type":"related"}],"termid":"GO:1904885"}


id: PBO:0088929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit Emc5","termid":"PBO:0088929"}


id: GO:0048235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a haploid sperm cell within the plant gametophyte.","definition_xrefs":["CL:0000366","GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"male gamete generation","termid":"GO:0048232"},{"relation_name":"part_of","term_name":"microgametogenesis","termid":"GO:0055046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen sperm cell differentiation","secondary_identifiers":["GO:0048234"],"synonyms":[{"name":"male gamete generation","type":"broad"},{"name":"male gametophyte sperm cell differentiation","type":"exact"},{"name":"sperm cell differentiation","type":"broad"}],"termid":"GO:0048235"}


id: PBO:0000643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease (predicted)","termid":"PBO:0000643"}


id: FYPO:0004468
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is decreased during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell tip during vegetative growth","termid":"FYPO:0001586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to cell tip during cellular response to salt stress","synonyms":[{"name":"decreased protein localisation to cell tip during cellular response to salt stress","type":"exact"},{"name":"decreased protein localization to cell end during cellular response to salt stress","type":"exact"},{"name":"decreased protein localization to cell tip during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cell tip during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"reduced protein localization to cell tip during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0004468"}


id: GO:0072279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the renal epithelium narrows along one axis and lengthens in a perpendicular axis that contributes to the shaping of a nephron in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convergent extension involved in nephron morphogenesis","termid":"GO:0072045"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"convergent extension involved in metanephric nephron morphogenesis","termid":"GO:0072279"}


id: PBO:0046701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS variant transcription factor 1","termid":"PBO:0046701"}


id: GO:0008994
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-rhamnulose 1-phosphate = glycerone phosphate + (S)-lactaldehyde.","definition_xrefs":["EC:4.1.2.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"rhamnulose-1-phosphate aldolase activity","secondary_identifiers":["MetaCyc:RHAMNULPALDOL-RXN","RHEA:19689"],"synonyms":[{"name":"L-rhamnulose 1-phosphate aldolase activity","type":"related"},{"name":"L-rhamnulose-1-phosphate S-lactaldehyde-lyase (glycerone-phosphate-forming)","type":"related"},{"name":"L-rhamnulose-1-phosphate lactaldehyde-lyase activity","type":"related"},{"name":"L-rhamnulose-phosphate aldolase activity","type":"related"},{"name":"rhamnulose phosphate aldolase activity","type":"related"}],"termid":"GO:0008994"}


id: GO:0102541
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-galactose 6-phosphate = beta-D-galactose 6-phosphate.","definition_xrefs":["GOC:pz","EC:5.1.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"D-galactose 6-phosphate 1-epimerase activity","secondary_identifiers":["MetaCyc:RXN-14816"],"termid":"GO:0102541"}


id: PBO:0066538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 4","termid":"PBO:0066538"}


id: PBO:0045469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dopamine receptor D5 pseudogene 1","termid":"PBO:0045469"}


id: MOD:01367
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:478#P"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorescein-5-thiosemicarbazide","termid":"MOD:00626"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluorescein-5-thiosemicarbazide - site P","synonyms":[{"name":"FTC","type":"related"},{"name":"fluorescein-5-thiosemicarbazide","type":"related"}],"termid":"MOD:01367"}


id: PBO:0110395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPAL1 pseudogene 1","termid":"PBO:0110395"}


id: GO:1902959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process.","definition_xrefs":["GO_REF:0000059","GOC:sjp","GOC:TermGenie","PMID:24577224"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endopeptidase activity","termid":"GO:0052548"},{"relation_name":"is_a","term_name":"regulation of amyloid precursor protein catabolic process","termid":"GO:1902991"},{"relation_name":"is_a","term_name":"regulation of aspartic-type peptidase activity","termid":"GO:1905245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","synonyms":[{"name":"regulation of aspartate protease activity involved in APP catabolic process","type":"exact"},{"name":"regulation of aspartate protease activity involved in APP catabolism","type":"exact"},{"name":"regulation of aspartate protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of aspartate protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of aspartate protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of aspartate protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of aspartic protease activity involved in APP catabolic process","type":"exact"},{"name":"regulation of aspartic protease activity involved in APP catabolism","type":"exact"},{"name":"regulation of aspartic protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of aspartic protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of aspartic protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of aspartic-type endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"regulation of aspartic-type endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of aspartyl protease activity involved in APP catabolic process","type":"exact"},{"name":"regulation of aspartyl protease activity involved in APP catabolism","type":"exact"},{"name":"regulation of aspartyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of aspartyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of aspartyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of carboxyl protease activity involved in APP catabolic process","type":"exact"},{"name":"regulation of carboxyl protease activity involved in APP catabolism","type":"exact"},{"name":"regulation of carboxyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of carboxyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of carboxyl protease activity involved in amyloid precursor protein degradation","type":"exact"}],"termid":"GO:1902959"}


id: GO:0016580
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A multiprotein complex that functions broadly in eukaryotic organisms as a transcriptional repressor of protein-coding genes, through the gene-specific deacetylation of histones. Amongst its subunits, the Sin3 complex contains Sin3-like proteins, and a number of core proteins that are shared with the NuRD complex (including histone deacetylases and histone binding proteins). The Sin3 complex does not directly bind DNA itself, but is targeted to specific genes through protein-protein interactions with DNA-binding proteins.","definition_xrefs":["PMID:12865422","PMID:10589671","PMID:11743021"],"gene_count":0,"genotype_count":0,"name":"obsolete Sin3 complex (obsolete GO:0016580)","termid":"GO:0016580"}


id: PBO:0027581
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_fragmented_DNA","termid":"PBO:0027581"}


id: PBO:0055276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2703","termid":"PBO:0055276"}


id: PBO:0034815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disease association, microcephalic primordial dwarfism","termid":"PBO:0034815"}


id: GO:0005011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with macrophage colony-stimulating factor (M-CSF) receptor ligand and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: ATP + a protein-L-tyrosine = ADP + a protein-L-tyrosine phosphate.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0140096","GO:0038023","GO:0016740","GO:0004672","GO:0003674"],"is_obsolete":false,"name":"macrophage colony-stimulating factor receptor activity","synonyms":[{"name":"CSF-1","type":"narrow"},{"name":"Fms","type":"narrow"},{"name":"M-CSF receptor activity","type":"exact"},{"name":"macrophage colony stimulating factor receptor activity","type":"exact"}],"termid":"GO:0005011"}


id: PBO:0082253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of translation initiation factor eIF2B; guanine-nucleotide exchange factor for eIF2; activity regulated by phosphorylated eIF2; positive regulator of GCN4 expression; mutations in human ortholog EIF2B2 cause fatal brain disease childhood ataxia with central nervous system hypomyelination (CACH); human ortholog EIF2B1 can complement yeast null mutant","termid":"PBO:0082253"}


id: PBO:0091786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA poly(A)-bearing Prl89","termid":"PBO:0091786"}


id: PBO:0070738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 8","termid":"PBO:0070738"}


id: PBO:0061383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 43","termid":"PBO:0061383"}


id: MOD:00941
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:488","PubMed:12175151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydropyrrolizidine alkaloid (dehydroretronecine) derivatized cysteine","synonyms":[{"name":"DHP","type":"related"},{"name":"Dehydropyrrolizidine alkaloid (dehydroretronecine) on cysteines","type":"related"}],"termid":"MOD:00941"}


id: PBO:0071601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 18","termid":"PBO:0071601"}


id: PR:P0CT69
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl2002 gene.","definition_xrefs":["UniProtKB:P0CT69","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L20-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.04","synonyms":[{"name":"Spom972h-rpl2002","type":"exact"},{"name":"YL17 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT69"}


id: PR:Q1MTQ7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A kinesin-like motor protein klp9/SPBC15D4.01c that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PomBase:SPBC15D4.01c","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinesin-like motor protein klp9/SPBC15D4.01c","termid":"PR:000027702"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like motor protein klp9/SPBC15D4.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15D4.01c","secondary_identifiers":["PR:000027703","UniProtKB:Q1MTQ7"],"synonyms":[{"name":"Spom972h-klp9","type":"exact"},{"name":"klp9p","type":"exact"}],"termid":"PR:Q1MTQ7"}


id: GO:0099101
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A potassium channel activity that is gated by binding of a G-protein beta-gamma dimer.","definition_xrefs":["PMID:9429760","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activity","termid":"GO:0005267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"G-protein gated potassium channel activity","termid":"GO:0099101"}


id: PBO:0028738
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-hercynylcysteine_sulfoxide_absent_from_cell","termid":"PBO:0028738"}


id: PBO:0002637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation release factor eRF1","termid":"PBO:0002637"}


id: PBO:0030692
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_glutathione_disulfide_level","termid":"PBO:0030692"}


id: GO:1900827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of membrane depolarization during a cardiac muscle cell action potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane depolarization during cardiac muscle cell action potential","termid":"GO:1900825"},{"relation_name":"is_a","term_name":"positive regulation of membrane depolarization","termid":"GO:1904181"},{"relation_name":"positively_regulates","term_name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of membrane depolarization during cardiac muscle cell action potential","synonyms":[{"name":"activation of membrane depolarization during cardiac muscle cell action potential","type":"narrow"},{"name":"up regulation of membrane depolarization during cardiac muscle cell action potential","type":"exact"},{"name":"up-regulation of membrane depolarization during cardiac muscle cell action potential","type":"exact"},{"name":"upregulation of membrane depolarization during cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1900827"}


id: PBO:0108906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPCPD1 pseudogene 1","termid":"PBO:0108906"}


id: PBO:0062911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2X 4","termid":"PBO:0062911"}


id: PBO:0003899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of mRNA decapping Edc3 (predicted)","termid":"PBO:0003899"}


id: PBO:0014573
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Insertional Suppressor of Sme2-delta","termid":"PBO:0014573"}


id: PBO:0087835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Thiol-specific peroxiredoxin; reduces hydroperoxides to protect against oxidative damage; function in vivo requires covalent conjugation to Urm1p","termid":"PBO:0087835"}


id: PBO:0047906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(8)(q24.1)","termid":"PBO:0047906"}


id: PBO:0072388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 14","termid":"PBO:0072388"}


id: GO:0035812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The elimination of sodium ions from peritubular capillaries (or surrounding hemolymph in invertebrates) into the renal tubules to be incorporated subsequently into the urine.","definition_xrefs":["GOC:mtg_25march11","GOC:yaf","PMID:25287933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal tubular secretion","termid":"GO:0097254"},{"relation_name":"part_of","term_name":"sodium ion homeostasis","termid":"GO:0055078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"renal sodium excretion","termid":"GO:0035812"}


id: GO:0106176
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a clathrin-coated endocytic vesicle.","definition_xrefs":["PMID:2516741","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytic vesicle lumen","termid":"GO:0071682"},{"relation_name":"part_of","term_name":"clathrin-coated endocytic vesicle","termid":"GO:0045334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"clathrin-coated endocytic vesicle lumen","termid":"GO:0106176"}


id: GO:0070777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-aspartate, the D-enantiomer of the anion of (2R)-2-aminobutanedioic acid  is transported across a lipid bilayer, from one side of a membrane to the other, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate transmembrane transport","termid":"GO:0015810"},{"relation_name":"is_a","term_name":"D-amino acid transport","termid":"GO:0042940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"D-aspartate transmembrane transport","termid":"GO:0070777"}


id: GO:0000733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The identification and annealing of complementary base pairs in single-strand DNA.","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA strand renaturation (obsolete GO:0000733)","termid":"GO:0000733"}


id: PBO:0072968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1B member 3, pseudogene","termid":"PBO:0072968"}


id: PBO:0039751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein O pseudogene 2","termid":"PBO:0039751"}


id: FYPO:0001555
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the intermediate RNAs formed during tRNA processing differ from wild type in size.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA processing","termid":"FYPO:0001554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"formation of abnormal tRNA processing intermediates","synonyms":[{"name":"abnormal tRNA maturation intermediates","type":"exact"},{"name":"formation of abnormal tRNA processing intermediates during mitotic cell cycle","type":"related"},{"name":"formation of abnormal tRNA processing intermediates during vegetative growth","type":"exact"}],"termid":"FYPO:0001555"}


id: PBO:0053394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 323","termid":"PBO:0053394"}


id: PR:Q9HGN7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translocation protein SEC63 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03255","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocation protein sec63 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36B7.03","secondary_identifiers":["UniProtKB:Q9HGN7"],"synonyms":[{"name":"Spom972h-SEC63","type":"exact"}],"termid":"PR:Q9HGN7"}


id: GO:0030808
data:
  {"annotated_genes":["SJAG_04422","SJAG_01402"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010510"},{"annotations":[114083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905706"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nucleotides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide metabolic process","termid":"GO:0006140"},{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"regulates","term_name":"nucleotide biosynthetic process","termid":"GO:0009165"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01402":null,"SJAG_04422":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of nucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of nucleotide anabolism","type":"exact"},{"name":"regulation of nucleotide biosynthesis","type":"exact"},{"name":"regulation of nucleotide formation","type":"exact"},{"name":"regulation of nucleotide synthesis","type":"exact"}],"termid":"GO:0030808","terms_by_termid":{"GO:0010510":null,"GO:1905706":null}}


id: PBO:0002230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translationally controlled tumor protein homolog (predicted)","termid":"PBO:0002230"}


id: GO:0042210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of octamethylcyclotetrasiloxane into dimethylsilanediol. The former is a tetramer of the latter.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic organosilicon metabolic process","termid":"GO:0018947"},{"relation_name":"is_a","term_name":"dimethylsilanediol metabolic process","termid":"GO:0046454"},{"relation_name":"is_a","term_name":"octamethylcyclotetrasiloxane catabolic process","termid":"GO:0046517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"octamethylcyclotetrasiloxane catabolic process to dimethylsilanediol","secondary_identifiers":["UM-BBD_pathwayID:osi"],"synonyms":[{"name":"catabolic process of octamethylcyclotetrasiloxane to DMSD","type":"exact"},{"name":"catabolism of octamethylcyclotetrasiloxane to DMSD","type":"exact"},{"name":"octamethylcyclotetrasiloxane breakdown to dimethylsilanediol","type":"exact"},{"name":"octamethylcyclotetrasiloxane degradation to dimethylsilanediol","type":"exact"}],"termid":"GO:0042210"}


id: PBO:0030755
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glutamate_dehydrogenase_(NADP+)_activity","termid":"PBO:0030755"}


id: GO:2000481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cAMP-dependent protein kinase activity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein serine/threonine kinase activity","termid":"GO:0071902"},{"relation_name":"is_a","term_name":"regulation of cAMP-dependent protein kinase activity","termid":"GO:2000479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cAMP-dependent protein kinase activity","synonyms":[{"name":"positive regulation of 3',5' cAMP-dependent protein kinase activity","type":"exact"},{"name":"positive regulation of 3',5'-cAMP-dependent protein kinase activity","type":"exact"},{"name":"positive regulation of AMPK","type":"related"},{"name":"positive regulation of ATP:protein phosphotransferase (cAMP-dependent) activity","type":"exact"},{"name":"positive regulation of PKA","type":"related"},{"name":"positive regulation of PKA C","type":"related"},{"name":"positive regulation of STK22","type":"related"},{"name":"positive regulation of adenosine 3',5'-cyclophosphate-dependent protein kinase activity","type":"exact"},{"name":"positive regulation of cAMP-dependent protein kinase, intrinsic catalyst activity","type":"exact"},{"name":"positive regulation of cyclic AMP-dependent protein kinase activity","type":"exact"},{"name":"positive regulation of protein kinase A activity","type":"related"}],"termid":"GO:2000481"}


id: PBO:0052050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KANSL1 antisense RNA 1","termid":"PBO:0052050"}


id: PBO:0049710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3 associated protein kinase","termid":"PBO:0049710"}


id: GO:0050658
data:
  {"annotated_genes":["SJAG_02661","SJAG_04721","SJAG_04379","SJAG_01065","SJAG_00992","SJAG_02274","SJAG_01652","SJAG_04347","SJAG_03986","SJAG_03693","SJAG_04017","SJAG_01467","SJAG_03470","SJAG_03593","SJAG_01374","SJAG_04202","SJAG_04480","SJAG_01534","SJAG_03358","SJAG_01449","SJAG_04148","SJAG_00471","SJAG_01013","SJAG_02534","SJAG_04310","SJAG_02209","SJAG_01185","SJAG_02757","SJAG_01083","SJAG_04472","SJAG_00178","SJAG_03299","SJAG_03283","SJAG_04536","SJAG_02520","SJAG_05328","SJAG_00298","SJAG_03729","SJAG_01529","SJAG_00375","SJAG_00093","SJAG_01584","SJAG_04645","SJAG_00641","SJAG_04083","SJAG_04115","SJAG_04589","SJAG_03156","SJAG_03002","SJAG_04622","SJAG_04656","SJAG_03847","SJAG_02425","SJAG_01715","SJAG_02704","SJAG_03300"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86677,111596,85559,113350,85073,101446,113479,93173,100024,99074,110972,97222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006406"},{"annotations":[112509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[59219,57984,63921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051028"},{"annotations":[87015,109330,111884,112404,107196,112659,110536,101807,114099,104765,93022,98726,97462,98036,105927,106499,111070,112511,112141,88250,115017,92609,102226,98823,97936,103706,107829,68984,100025,111597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016973"},{"annotations":[90061,85084,96485,101121,92198,92582,91048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006405"},{"annotations":[98632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006404"},{"annotations":[101809,109614,85425,108074,101337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006409"},{"annotations":[95607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016031"},{"annotations":[109615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071528"}]},"cv_name":"biological_process","definition":"The directed movement of RNA, ribonucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid transport","termid":"GO:0050657"},{"relation_name":"is_a","term_name":"establishment of RNA localization","termid":"GO:0051236"}],"gene_count":56,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00375":null,"SJAG_00471":null,"SJAG_00641":null,"SJAG_00992":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01467":null,"SJAG_01529":null,"SJAG_01534":null,"SJAG_01584":null,"SJAG_01652":null,"SJAG_01715":null,"SJAG_02209":null,"SJAG_02274":null,"SJAG_02425":null,"SJAG_02520":null,"SJAG_02534":null,"SJAG_02661":null,"SJAG_02704":null,"SJAG_02757":null,"SJAG_03002":null,"SJAG_03156":null,"SJAG_03283":null,"SJAG_03299":null,"SJAG_03300":null,"SJAG_03358":null,"SJAG_03470":null,"SJAG_03593":null,"SJAG_03693":null,"SJAG_03729":null,"SJAG_03847":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04083":null,"SJAG_04115":null,"SJAG_04148":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04347":null,"SJAG_04379":null,"SJAG_04472":null,"SJAG_04480":null,"SJAG_04536":null,"SJAG_04589":null,"SJAG_04622":null,"SJAG_04645":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"RNA transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0050658","terms_by_termid":{"GO:0006404":null,"GO:0006405":null,"GO:0006406":null,"GO:0006409":null,"GO:0016031":null,"GO:0016973":null,"GO:0031990":null,"GO:0051028":null,"GO:0071528":null}}


id: PBO:0079660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 8","termid":"PBO:0079660"}


id: PR:P87304
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An acyl-coenzyme A thioesterase 13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"esterase C31F10.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.02","secondary_identifiers":["UniProtKB:P87304"],"synonyms":[{"name":"Spom972h-ACOT13","type":"exact"}],"termid":"PR:P87304"}


id: GO:0033845
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxymethylfurfural + NADPH + H+ = 2,5-bis-hydroxymethylfuran + NADP+.","definition_xrefs":["GOC:mah","GOC:jp","PMID:15338422","PMID:16652391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"hydroxymethylfurfural reductase (NADPH) activity","termid":"GO:0033845"}


id: GO:1900267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of substance P receptor binding.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of receptor binding","termid":"GO:1900122"},{"relation_name":"is_a","term_name":"regulation of substance P receptor binding","termid":"GO:1900265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of substance P receptor binding","synonyms":[{"name":"activation of neurokinin-1 receptor binding","type":"exact"},{"name":"activation of substance P receptor binding","type":"narrow"},{"name":"activation of substance P receptor ligand","type":"narrow"},{"name":"positive regulation of neurokinin-1 receptor binding","type":"exact"},{"name":"positive regulation of substance P receptor ligand","type":"narrow"},{"name":"up regulation of neurokinin-1 receptor binding","type":"exact"},{"name":"up regulation of substance P receptor binding","type":"exact"},{"name":"up regulation of substance P receptor ligand","type":"narrow"},{"name":"up-regulation of neurokinin-1 receptor binding","type":"exact"},{"name":"up-regulation of substance P receptor binding","type":"exact"},{"name":"up-regulation of substance P receptor ligand","type":"narrow"},{"name":"upregulation of neurokinin-1 receptor binding","type":"exact"},{"name":"upregulation of substance P receptor binding","type":"exact"},{"name":"upregulation of substance P receptor ligand","type":"narrow"}],"termid":"GO:1900267"}


id: FYPO:0003828
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the ribosomal small subunit protein S6 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:24463365","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal ribosomal S6 protein phosphorylation during vegetative growth","synonyms":[{"name":"normal ribosomal S6 protein phosphorylation during mitotic cell cycle","type":"related"},{"name":"normal ribosome S6 phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0003828"}


id: PBO:0029713
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_phenotype","termid":"PBO:0029713"}


id: PBO:0083102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase and DNA-dependent ATPase; role in DNA repair and checkpoint recovery, in the proper timing of commitment to meiotic recombination and the Meiosis I to II transition; blocks trinucleotide repeat expansion; affects genome stability; disassembles Rad51p nucleoprotein filaments during meiotic recombination; stimulates Mus81p-Mms4p endonuclease activity independent of catalytic activity; ATPase and ssDNA translocating motor activities inhibited by Dmc1p; functional homolog of human RTEL1","termid":"PBO:0083102"}


id: PBO:0002480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase pseudogene","termid":"PBO:0002480"}


id: FYPO:0006534
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell periphery does not occur when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery","termid":"FYPO:0006533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to cell periphery during nitrogen starvation","synonyms":[{"name":"abolished protein localisation to cell periphery during nitrogen starvation","type":"exact"},{"name":"abolished protein localization to cell periphery during nitrogen depletion","type":"exact"},{"name":"abolished protein localization to cell periphery during nitrogen deprivation","type":"exact"},{"name":"protein absent from cell periphery during nitrogen starvation","type":"related"},{"name":"protein localization to cell periphery abolished during nitrogen starvation","type":"exact"}],"termid":"FYPO:0006534"}


id: RO:0002012
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A part of relation that applies only between occurents.","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"},{"relation_name":"is_a","term_name":"causally_upstream_of_or_within","termid":"RO:0002418"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occurent_part_of","termid":"RO:0002012"}


id: PBO:0062391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 12 pseudogene","termid":"PBO:0062391"}


id: GO:0002858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of natural killer cell mediated cytotoxicity directed against tumor cell target.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated immune response to tumor cell","termid":"GO:0002855"},{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated cytotoxicity","termid":"GO:0042269"},{"relation_name":"regulates","term_name":"natural killer cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002858"}


id: GO:0000951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of branched chain amino acids to produce branched chain alcohols with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. When methionine is used as the substrate, 3-methylthiopropanol is produced. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of alcohols, often collectively referred to as fusel alcohols. Depending on the redox state of the cells, carboxylic acid derivatives may be produced instead of alcohols.","definition_xrefs":["PMID:18281432","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process to alcohol via Ehrlich pathway","termid":"GO:0000947"},{"relation_name":"is_a","term_name":"methionine catabolic process","termid":"GO:0009087"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520","GO:0006790","GO:0044248"],"is_obsolete":false,"name":"methionine catabolic process to 3-methylthiopropanol","termid":"GO:0000951"}


id: FYPO:0007029
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to polysomes is decreased.","definition_xrefs":["PMID:31285271","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to polysome","synonyms":[{"name":"decreased protein localisation to polysome","type":"exact"},{"name":"decreased protein localization to polyribosome","type":"exact"},{"name":"decreased protein localization to polysome during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to polysome during vegetative growth","type":"exact"},{"name":"reduced protein localization to polysome","type":"exact"}],"termid":"FYPO:0007029"}


id: PBO:0026695
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_tellurite","termid":"PBO:0026695"}


id: GO:0010829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of glucose transport across a membrane. Glucose transport is the directed movement of the hexose monosaccharide glucose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucose transmembrane transport","termid":"GO:0010827"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"negatively_regulates","term_name":"glucose transmembrane transport","termid":"GO:1904659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of glucose transmembrane transport","synonyms":[{"name":"negative regulation of glucose transport","type":"related"}],"termid":"GO:0010829"}


id: GO:0089722
data:
  {"annotated_genes":["SJAG_00276","SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89401,108336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990536"}]},"cv_name":"biological_process","definition":"The directed movement of phosphoenolpytuvate across a membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoenolpyruvate transport","termid":"GO:0015714"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"phosphoenolpyruvate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0089722","terms_by_termid":{"GO:1990536":null}}


id: PBO:0071843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 38","termid":"PBO:0071843"}


id: PBO:0090157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit Pfd1","termid":"PBO:0090157"}


id: PBO:0065038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELID1 pseudogene 3","termid":"PBO:0065038"}


id: GO:0047177
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-alkyl-2-lyso-sn-glycero-3-phosphoethanolamine + 1-alkyl-2-arachidonyl-sn-glycero-3-phosphocholine = 1-alkyl-2-lyso-sn-glycero-3-phosphocholine + 1-alkyl-2-arachidonyl-sn-glycero-3-phosphoethanolamine.","definition_xrefs":["EC:2.3.1.147","MetaCyc:2.3.1.147-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glycerophospholipid arachidonoyl-transferase (CoA-independent) activity","secondary_identifiers":["RHEA:15409"],"synonyms":[{"name":"1-organyl-2-arachidonoyl-sn-glycero-3-phosphocholine:1-organyl-2-lyso-sn-glycero-3-phosphoethanolamine arachidonoyltransferase (CoA-independent)","type":"related"},{"name":"1-organyl-2-arachidonyl-sn-glycero-3-phosphocholine:1-organyl-2-lyso-sn-glycero-3-phosphoethanolamine arachidonoyltransferase (CoA-independent)","type":"related"}],"termid":"GO:0047177"}


id: MOD:02019
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-timnodonoyl-L-lysine.","direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"N-timnodonoylated residue","termid":"MOD:02020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-timnodonoyl-L-lysine","termid":"MOD:02019"}


id: GO:1903426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reactive oxygen species biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:TermGenie","PMID:24252804","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of reactive oxygen species metabolic process","termid":"GO:2000377"},{"relation_name":"regulates","term_name":"reactive oxygen species biosynthetic process","termid":"GO:1903409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of reactive oxygen species biosynthetic process","synonyms":[{"name":"regulation of ROS formation","type":"related"},{"name":"regulation of ROS generation","type":"related"},{"name":"regulation of reactive oxygen species anabolism","type":"exact"},{"name":"regulation of reactive oxygen species biosynthesis","type":"exact"},{"name":"regulation of reactive oxygen species formation","type":"exact"},{"name":"regulation of reactive oxygen species generation","type":"related"},{"name":"regulation of reactive oxygen species synthesis","type":"exact"}],"termid":"GO:1903426"}


id: PR:O42665
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27D7.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized but2-like protein C27D7.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.11c","synonyms":[{"name":"Spom972h-SPAC27D7.11c","type":"exact"}],"termid":"PR:O42665"}


id: PBO:0066833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 132","termid":"PBO:0066833"}


id: GO:0045568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of TRAIL (TNF-related apoptosis inducing ligand) receptor 2.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of TRAIL receptor 2 biosynthetic process (obsolete GO:0045568)","synonyms":[{"name":"activation of TRAIL receptor 2 biosynthetic process","type":"narrow"},{"name":"positive regulation of TRAIL receptor 2 anabolism","type":"exact"},{"name":"positive regulation of TRAIL receptor 2 biosynthesis","type":"exact"},{"name":"positive regulation of TRAIL receptor 2 formation","type":"exact"},{"name":"positive regulation of TRAIL receptor 2 synthesis","type":"exact"},{"name":"stimulation of TRAIL receptor 2 biosynthetic process","type":"narrow"},{"name":"up regulation of TRAIL receptor 2 biosynthetic process","type":"exact"},{"name":"up-regulation of TRAIL receptor 2 biosynthetic process","type":"exact"},{"name":"upregulation of TRAIL receptor 2 biosynthetic process","type":"exact"}],"termid":"GO:0045568"}


id: PBO:0069966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1261, pseudogene","termid":"PBO:0069966"}


id: GO:0039525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a virus effects a change in the organization of chromatin in the host.","definition_xrefs":["GOC:bf","PMID:16687403","PMID:11483770","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by virus of host process","termid":"GO:0019048"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"},{"relation_name":"regulates","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006325"],"is_obsolete":false,"name":"modulation by virus of host chromatin organization","synonyms":[{"name":"modulation by virus of host chromatin organisation","type":"exact"},{"name":"modulation of host chromatin by virus","type":"exact"},{"name":"modulation of host chromatin structure by virus","type":"exact"},{"name":"regulation by virus of host chromatin organization","type":"related"}],"termid":"GO:0039525"}


id: PBO:0080290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 54 pseudogene","termid":"PBO:0080290"}


id: FYPO:0001309
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a larger than normal proportion of cells in the population remains viable after entering stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002057"],"is_obsolete":false,"name":"increased viability in stationary phase","synonyms":[{"name":"decreased chronological cell aging","type":"related"},{"name":"increased cell population viability in stationary phase","type":"exact"},{"name":"increased chronological lifespan","type":"related"}],"termid":"FYPO:0001309"}


id: PBO:0038794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 1A (pseudogene)","termid":"PBO:0038794"}


id: PBO:0073354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 13","termid":"PBO:0073354"}


id: PBO:0084551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the seripauperin multigene family; encoded mainly in subtelomeric region; active during alcoholic fermentation; regulated by anaerobiosis; negatively regulated by oxygen; repressed by heme","termid":"PBO:0084551"}


id: PBO:0038682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase short chain family member 1","termid":"PBO:0038682"}


id: GO:0006965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of biosynthesis of antibacterial peptides active against Gram-positive bacteria.","definition_xrefs":["GOC:mah","PMID:10973475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","termid":"GO:0002816"},{"relation_name":"is_a","term_name":"positive regulation of antibacterial peptide biosynthetic process","termid":"GO:0006963"},{"relation_name":"positively_regulates","term_name":"biosynthetic process of antibacterial peptides active against Gram-positive bacteria","termid":"GO:0002815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","synonyms":[{"name":"activation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","type":"narrow"},{"name":"anti-Gram-positive bacterial peptide induction","type":"exact"},{"name":"anti-Gram-positive bacterial polypeptide induction","type":"exact"},{"name":"stimulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","type":"narrow"},{"name":"up regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","type":"exact"},{"name":"up-regulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","type":"exact"},{"name":"upregulation of biosynthetic process of antibacterial peptides active against Gram-positive bacteria","type":"exact"}],"termid":"GO:0006965"}


id: PBO:0039515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 30B pseudogene 3","termid":"PBO:0039515"}


id: PBO:0062624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily H member 1","termid":"PBO:0062624"}


id: PBO:0082746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RSC chromatin remodeling complex; non-essential gene required for regulation of ribosomal protein genes and the cell wall/stress response; null mutants are osmosensitive; RSC30 has a paralog, RSC3, that arose from the whole genome duplication","termid":"PBO:0082746"}


id: GO:0009067
data:
  {"annotated_genes":["SJAG_00714","SJAG_03881","SJAG_00309","SJAG_04042","SJAG_00234","SJAG_03671","SJAG_03614","SJAG_03712","SJAG_03141","SJAG_00396","SJAG_03985","SJAG_00419","SJAG_01955","SJAG_04549","SJAG_02832","SJAG_03152","SJAG_04425","SJAG_00869","SJAG_04149","SJAG_02293","SJAG_03312","SJAG_00502","SJAG_00881","SJAG_04098","SJAG_02972","SJAG_01466","SJAG_02388","SJAG_04688","SJAG_01404","SJAG_03306","SJAG_01630","SJAG_04953","SJAG_01061","SJAG_03102","SJAG_00395","SJAG_00830","SJAG_00432","SJAG_04459","SJAG_02689","SJAG_00107","SJAG_02290","SJAG_01574","SJAG_06635"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64687,106577,107165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[98238,106868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006529"},{"annotations":[107892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019266"},{"annotations":[107893,83924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006532"},{"annotations":[98239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070981"},{"annotations":[83700,106506,99370,86753,107171,99860,104386,109338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901705"},{"annotations":[96739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[99677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019281"},{"annotations":[110023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019279"},{"annotations":[106579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019283"},{"annotations":[91638,96070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990355"},{"annotations":[96725,85852,88715,103074,108508,95082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[103075,88716,95083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019284"},{"annotations":[105765,97272,92430,86422,97999,89051,92750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009085"},{"annotations":[105766,86423,98000,92431,109533,92751,89052,97273,94419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019878"},{"annotations":[94480,86100,92715,102053,99678,107167,108046,98806,111867,94596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009086"},{"annotations":[102054,111868,108047,96906,106746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009088"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of amino acids of the aspartate family, comprising asparagine, aspartate, lysine, methionine and threonine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid metabolic process","termid":"GO:0009066"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"proteinogenic amino acid biosynthetic process","termid":"GO:0170038"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00107":null,"SJAG_00234":null,"SJAG_00309":null,"SJAG_00395":null,"SJAG_00396":null,"SJAG_00419":null,"SJAG_00432":null,"SJAG_00502":null,"SJAG_00714":null,"SJAG_00830":null,"SJAG_00869":null,"SJAG_00881":null,"SJAG_01061":null,"SJAG_01404":null,"SJAG_01466":null,"SJAG_01574":null,"SJAG_01630":null,"SJAG_01955":null,"SJAG_02290":null,"SJAG_02293":null,"SJAG_02388":null,"SJAG_02689":null,"SJAG_02832":null,"SJAG_02972":null,"SJAG_03102":null,"SJAG_03141":null,"SJAG_03152":null,"SJAG_03306":null,"SJAG_03312":null,"SJAG_03614":null,"SJAG_03671":null,"SJAG_03712":null,"SJAG_03881":null,"SJAG_03985":null,"SJAG_04042":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_04425":null,"SJAG_04459":null,"SJAG_04549":null,"SJAG_04688":null,"SJAG_04953":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"aspartate family amino acid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"aspartate family amino acid anabolism","type":"exact"},{"name":"aspartate family amino acid biosynthesis","type":"exact"},{"name":"aspartate family amino acid formation","type":"exact"},{"name":"aspartate family amino acid synthesis","type":"exact"}],"termid":"GO:0009067","terms_by_termid":{"GO:0006529":null,"GO:0006532":null,"GO:0009085":null,"GO:0009086":null,"GO:0009088":null,"GO:0019266":null,"GO:0019279":null,"GO:0019280":null,"GO:0019281":null,"GO:0019283":null,"GO:0019284":null,"GO:0019509":null,"GO:0019878":null,"GO:0070981":null,"GO:0071266":null,"GO:1901705":null,"GO:1990355":null}}


id: PBO:0005576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leptomycin efflux transporter Pmd1","termid":"PBO:0005576"}


id: PBO:0030165
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_alpha,alpha-trehalase_activity_during_sporulation","termid":"PBO:0030165"}


id: GO:0000774
data:
  {"annotated_genes":["SJAG_02875","SJAG_04511","SJAG_01556","SJAG_04014","SJAG_01737","SJAG_04817","SJAG_01510"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69641,83991,88393,100491,105814,105947,106931],"is_not":false,"summary":null,"term":"GO:0000774"}]},"cv_name":"molecular_function","definition":"Binds to and stimulates the hydrolysis and exchange of adenyl nucleotides by other proteins.","definition_xrefs":["GOC:kd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase regulator activity","termid":"GO:0060590"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01510":null,"SJAG_01556":null,"SJAG_01737":null,"SJAG_02875":null,"SJAG_04014":null,"SJAG_04511":null,"SJAG_04817":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0098772"],"is_obsolete":false,"name":"adenyl-nucleotide exchange factor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5252079"],"termid":"GO:0000774","terms_by_termid":{"GO:0000774":null}}


id: PBO:0113379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ferric reductase with similarity to Fre2p; expression induced by low iron levels; targeted to vacuole via AP-3 pathway","termid":"PBO:0113379"}


id: PBO:0073149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC24 homolog B, COPII coat complex component","termid":"PBO:0073149"}


id: PBO:0029662
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_endodeoxyribonuclease_activity","termid":"PBO:0029662"}


id: PR:000027626
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tyrosine-protein phosphatase Clp1 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PomBase:MAH","PMID:16085489","PMID:18951025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine-protein phosphatase Clp1","termid":"PR:000027623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine-protein phosphatase Clp1 unmodified form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC1782.09c","synonyms":[{"name":"Spom-CDC14/UnMod","type":"exact"},{"name":"Spom-clp1/UnMod","type":"exact"},{"name":"clip1p unmodified","type":"related"},{"name":"flp1p unmodified","type":"related"},{"name":"tyrosine-protein phosphatase CDC14 unmodified form (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000027626"}


id: GO:0047729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carnitine + H+ = 2-methylcholine + CO2.","definition_xrefs":["RHEA:21576","EC:4.1.1.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"carnitine decarboxylase activity","secondary_identifiers":["MetaCyc:CARNITINE-DECARBOXYLASE-RXN","KEGG_REACTION:R02398"],"synonyms":[{"name":"carnitine carboxy-lyase (2-methylcholine-forming)","type":"related"},{"name":"carnitine carboxy-lyase activity","type":"related"}],"termid":"GO:0047729"}


id: PR:Q10150
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar fusion protein MON1 homolog A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00252","PANTHER:PTHR13027:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar fusion protein mon1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.03c","secondary_identifiers":["UniProtKB:Q10150"],"synonyms":[{"name":"Spom972h-MON1A","type":"exact"}],"termid":"PR:Q10150"}


id: PBO:0038903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor D1","termid":"PBO:0038903"}


id: GO:0018803
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3E)-4-(2-carboxyphenyl)-2-oxobut-3-enoate = 2-carboxybenzaldehyde + pyruvate.","definition_xrefs":["EC:4.1.2.34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"4-(2-carboxyphenyl)-2-oxobut-3-enoate aldolase activity","secondary_identifiers":["RHEA:16453","MetaCyc:4.1.2.34-RXN","UM-BBD_reactionID:r0487"],"synonyms":[{"name":"(3E)-4-(2-carboxyphenyl)-2-oxobut-3-enoate 2-carboxybenzaldehyde-lyase activity","type":"narrow"},{"name":"(3Z)-4-(2-carboxyphenyl)-2-oxobut-3-enoate 2-carboxybenzaldehyde-lyase (pyruvate-forming)","type":"related"},{"name":"(3Z)-4-(2-carboxyphenyl)-2-oxobut-3-enoate 2-carboxybenzaldehyde-lyase activity","type":"narrow"},{"name":"2'-carboxybenzalpyruvate aldolase activity","type":"related"},{"name":"trans-2'-carboxybenzalpyruvate hydratase-aldolase activity","type":"exact"}],"termid":"GO:0018803"}


id: PBO:0013476
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichostatin A suppresses accumulation of septated cells, but does not restore wild-type checkpoint function, in chk1delta mutant","termid":"PBO:0013476"}


id: PBO:0017671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR79 (predicted)","termid":"PBO:0017671"}


id: GO:0031219
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of 2,6-beta-D-fructofuranosidic linkages in 2,6-beta-D-fructans (levans) containing more than 3 fructose units.","definition_xrefs":["EC:3.2.1.65","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"levanase activity","secondary_identifiers":["MetaCyc:3.2.1.65-RXN"],"synonyms":[{"name":"2,6-beta-D-fructan fructanohydrolase activity","type":"related"},{"name":"levan hydrolase activity","type":"exact"}],"termid":"GO:0031219"}


id: PBO:0069431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 696, pseudogene","termid":"PBO:0069431"}


id: PBO:0076269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapse associated protein 1","termid":"PBO:0076269"}


id: PBO:0069763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1046, pseudogene","termid":"PBO:0069763"}


id: PBO:0001227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase (ubiquinone) iron-sulfur protein subunit (predicted)","termid":"PBO:0001227"}


id: PBO:0053791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1044","termid":"PBO:0053791"}


id: PBO:0079090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 5-3","termid":"PBO:0079090"}


id: GO:0070854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a heavy chain of a myosin VI complex.","definition_xrefs":["GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin heavy chain binding","termid":"GO:0032036"},{"relation_name":"is_a","term_name":"myosin VI binding","termid":"GO:0070853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0008092","GO:0005488"],"is_obsolete":false,"name":"myosin VI heavy chain binding","termid":"GO:0070854"}


id: GO:1901684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which arsenate is transported across a membrane.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arsenite transport","termid":"GO:0015700"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"arsenate ion transmembrane transport","termid":"GO:1901684"}


id: PBO:0082891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin-dependent kinase (CDK) catalytic subunit; master regulator of mitotic and meiotic cell cycles; alternately associates with G1, S, G2/M phase cyclins, which provide substrate specificity; regulates metabolism, basal transcription, chromosome dynamics, growth and morphogenesis; transcript induction in osmostress involves antisense RNA; human homologs CDK1, CDK2, CDK3 can complement yeast conditional cdc28 mutants; human CDK1, CDK2 can complement yeast cdc28 null mutant","termid":"PBO:0082891"}


id: PBO:0070539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 5","termid":"PBO:0070539"}


id: PR:Q10318
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dihydroxy-acid dehydratase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00977","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxy-acid dehydratase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.06c","secondary_identifiers":["UniProtKB:Q10318"],"synonyms":[{"name":"2,3-dihydroxy acid hydrolyase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DAD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ilvD","type":"exact"}],"termid":"PR:Q10318"}


id: PBO:0086629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; YMR253C is not an essential gene","termid":"PBO:0086629"}


id: PBO:0083142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps 3' end of verified gene NUP53/YMR153W","termid":"PBO:0083142"}


id: FYPO:0001759
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein phosphatase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phosphatase activity","termid":"FYPO:0004469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal protein phosphatase activity","synonyms":[{"name":"normal phosphoprotein phosphatase activity","type":"exact"}],"termid":"FYPO:0001759"}


id: PBO:0062453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 125 pseudogene","termid":"PBO:0062453"}


id: PBO:0111350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophismin-like histone chaperone/CENP-A amino terminus domain (NTD) isomerase Ani1/Fkbp39","termid":"PBO:0111350"}


id: PBO:0069946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1239, pseudogene","termid":"PBO:0069946"}


id: PBO:0039788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen receptor","termid":"PBO:0039788"}


id: PBO:0003216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S12 (predicted)","termid":"PBO:0003216"}


id: GO:0005016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotrophin TRKC receptor activity (obsolete GO:0005016)","synonyms":[{"name":"neurotrophin TRKC receptor activity","type":"exact"}],"termid":"GO:0005016"}


id: PBO:0036005
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_and_H3-K14_acetylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036005"}


id: PBO:0054392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1788","termid":"PBO:0054392"}


id: PBO:0074654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 41B","termid":"PBO:0074654"}


id: FYECO:0000327
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which the proteasome inhibitor MG132 was added to the medium or assay buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ MG132","synonyms":[{"name":"proteasome inhibitor","type":"broad"}],"termid":"FYECO:0000327"}


id: PBO:0052070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine acetyltransferase 14","termid":"PBO:0052070"}


id: GO:0051698
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + L-saccharopine + O2 = (S)-2-amino-6-oxohexanoate + H2O2 + L-glutamate.","definition_xrefs":["RHEA:28210","PMID:16233628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"saccharopine oxidase activity","secondary_identifiers":["EC:1.5.3.18"],"synonyms":[{"name":"SAX activity","type":"broad"}],"termid":"GO:0051698"}


id: GO:0006268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating unpaired template strands for DNA replication.","definition_xrefs":["ISBN:071673706X","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA duplex unwinding","termid":"GO:0032508"},{"relation_name":"part_of","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"DNA unwinding involved in DNA replication","synonyms":[{"name":"DNA unwinding during replication","type":"related"},{"name":"DNA unwinding factor","type":"related"}],"termid":"GO:0006268"}


id: PBO:0090380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly frataxin Fxn1","termid":"PBO:0090380"}


id: PBO:0040532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,3-N-acetylgalactosaminyltransferase 2","termid":"PBO:0040532"}


id: GO:1900594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (+)-kotanin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"(+)-kotanin metabolic process","synonyms":[{"name":"(+)-kotanin metabolism","type":"exact"}],"termid":"GO:1900594"}


id: PBO:0046542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group FC1 member 1, envelope","termid":"PBO:0046542"}


id: GO:0044305
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The terminal specialization of a calyciferous axon which forms large synapses in the mammalian auditory central nervous system.","definition_xrefs":["NIF_Subcellular:sao1684283879","PMID:11823805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon terminus","termid":"GO:0043679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"calyx of Held","termid":"GO:0044305"}


id: FYPO:0006903
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of protein measured in a cell is lower than normal during S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased total protein level during vegetative growth","termid":"FYPO:0006846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased total protein level during mitotic S phase","synonyms":[{"name":"decreased total protein accumulation during mitotic S phase","type":"related"},{"name":"decreased total protein content during mitotic S phase","type":"exact"},{"name":"decreased total protein level during S phase of mitotic cell cycle","type":"exact"},{"name":"reduced total protein level during mitotic S phase","type":"exact"}],"termid":"FYPO:0006903"}


id: PBO:0000802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA 5' exonuclease (predicted)","termid":"PBO:0000802"}


id: PBO:0077925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane phosphatase with tensin homology","termid":"PBO:0077925"}


id: PBO:0041379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C5 3' UTR overlapping transcript 1","termid":"PBO:0041379"}


id: GO:1905750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endosome to plasma membrane protein transport.","definition_xrefs":["GO_REF:0000058","PMID:22869721","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular protein transport","termid":"GO:0090317"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to plasma membrane","termid":"GO:1903077"},{"relation_name":"is_a","term_name":"regulation of endosome to plasma membrane protein transport","termid":"GO:1905749"},{"relation_name":"is_a","term_name":"negative regulation of endocytic recycling","termid":"GO:2001136"},{"relation_name":"negatively_regulates","term_name":"endosome to plasma membrane protein transport","termid":"GO:0099638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"negative regulation of endosome to plasma membrane protein transport","synonyms":[{"name":"down regulation of endosome to plasma membrane protein transport","type":"exact"},{"name":"down-regulation of endosome to plasma membrane protein transport","type":"exact"},{"name":"downregulation of endosome to plasma membrane protein transport","type":"exact"},{"name":"inhibition of endosome to plasma membrane protein transport","type":"narrow"}],"termid":"GO:1905750"}


id: PomGeneEx:0000007
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneEx","definition":"A gene expression qualifier that indicates that an RNA or protein is present at the same level or produced at a the same rate under two or more sets of conditions or over a time course.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression qualifier","termid":"PomGeneEx:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"constant","synonyms":[{"name":"gene expression constant","type":"exact"},{"name":"gene product level constant","type":"exact"}],"termid":"PomGeneEx:0000007"}


id: GO:0009626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The rapid, localized death of plant cells in response to invasion by a pathogen.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"symbiont-induced defense-related programmed cell death","termid":"GO:0034050"},{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant-type hypersensitive response","synonyms":[{"name":"HR","type":"broad"},{"name":"HR-PCD","type":"exact"},{"name":"plant hypersensitive response","type":"exact"}],"termid":"GO:0009626"}


id: PBO:0048555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine-fructose-6-phosphate transaminase 2","termid":"PBO:0048555"}


id: PBO:0082601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clathrin heavy chain; subunit of the major coat protein involved in intracellular protein transport and endocytosis; the clathrin triskelion is a trimeric molecule composed of three heavy chains that radiate from a vertex and three light chains which bind noncovalently near the vertex of the triskelion; the light chain (CLC1) is thought to regulate function","termid":"PBO:0082601"}


id: PBO:0082711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the mitochondrial TIM22 complex; involved in insertion of polytopic proteins into the inner membrane","termid":"PBO:0082711"}


id: PBO:0059985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 5","termid":"PBO:0059985"}


id: PATO:0000286
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000286 cytoplasmic male sterility (obsolete PATO:0000286)","termid":"PATO:0000286"}


id: PBO:0064866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 26","termid":"PBO:0064866"}


id: GO:0045265
data:
  {"annotated_genes":["SJAG_00133","SJAG_03925","SJAG_00836"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99733,103880,111927],"is_not":false,"summary":null,"term":"GO:0045265"}]},"cv_name":"cellular_component","definition":"One of two stalks that connect the catalytic core of the hydrogen-transporting ATP synthase to the membrane-associated Fo proteins; is thought to prevent futile rotation of the catalytic core.","definition_xrefs":["PMID:10838056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"},{"relation_name":"part_of","term_name":"proton-transporting ATP synthase complex, coupling factor F(o)","termid":"GO:0045263"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00836":null,"SJAG_03925":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proton-transporting ATP synthase, stator stalk","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hydrogen-transporting ATP synthase, stator stalk","type":"exact"}],"termid":"GO:0045265","terms_by_termid":{"GO:0045265":null}}


id: PBO:0054287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1678","termid":"PBO:0054287"}


id: GO:0008730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tartrate = H2O + oxaloacetate.","definition_xrefs":["RHEA:15413","EC:4.2.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L(+)-tartrate dehydratase activity","secondary_identifiers":["KEGG_REACTION:R00339","MetaCyc:LTARTDEHYDRA-RXN"],"synonyms":[{"name":"(R,R)-tartrate hydro-lyase (oxaloacetate-forming)","type":"related"},{"name":"(R,R)-tartrate hydro-lyase activity","type":"related"},{"name":"L-(+)-tartaric acid dehydratase activity","type":"related"},{"name":"L-tartrate dehydratase activity","type":"related"},{"name":"tartaric acid dehydrase activity","type":"related"},{"name":"tartrate dehydratase activity","type":"related"}],"termid":"GO:0008730"}


id: SO:0000849
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A component of the three-prime long terminal repeat.","definition_xrefs":["PMID:8649407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_component","termid":"SO:0000848"},{"relation_name":"part_of","term_name":"three_prime_LTR","termid":"SO:0000426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_LTR_component","synonyms":[{"name":"3' long terminal repeat component","type":"exact"},{"name":"three prime LTR component","type":"exact"}],"termid":"SO:0000849"}


id: GO:0047426
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + ricinine = NH3 + 3-carboxy-4-methoxy-N-methyl-2-pyridone.","definition_xrefs":["MetaCyc:3.5.5.2-RXN","EC:3.5.5.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrilase activity","termid":"GO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"ricinine nitrilase activity","secondary_identifiers":["RHEA:22704"],"synonyms":[{"name":"ricinine aminohydrolase activity","type":"related"}],"termid":"GO:0047426"}


id: PBO:0041665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACTIN antisense RNA 1","termid":"PBO:0041665"}


id: PBO:0081428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 282","termid":"PBO:0081428"}


id: PBO:0071634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 53","termid":"PBO:0071634"}


id: GO:2001206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of osteoclast development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of osteoclast differentiation","termid":"GO:0045672"},{"relation_name":"is_a","term_name":"regulation of osteoclast development","termid":"GO:2001204"},{"relation_name":"positively_regulates","term_name":"osteoclast development","termid":"GO:0036035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of osteoclast development","synonyms":[{"name":"positive regulation of osteoclast cell development","type":"exact"}],"termid":"GO:2001206"}


id: PBO:0003737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase Pfa3 (predicted)","termid":"PBO:0003737"}


id: PBO:0029934
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mononucleate_monoseptate_vegetative_cell","termid":"PBO:0029934"}


id: PBO:0045763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl-CoA hydratase domain containing 3","termid":"PBO:0045763"}


id: PBO:0047522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"free fatty acid receptor 2","termid":"PBO:0047522"}


id: GO:0003935
data:
  {"annotated_genes":["SJAG_04711","SJAG_00376"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83545,97219],"is_not":false,"summary":null,"term":"GO:0003935"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + 4 H2O = 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)-pyrimidine + formate + 3 H+ + 2 phosphate.","definition_xrefs":["EC:3.5.4.25","RHEA:23704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP cyclohydrolase activity","termid":"GO:0003933"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00376":null,"SJAG_04711":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"GTP cyclohydrolase II activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R00425","MetaCyc:GTP-CYCLOHYDRO-II-RXN"],"synonyms":[{"name":"GTP 7,8-8,9-dihydrolase (diphosphate-forming)","type":"related"},{"name":"GTP-8-formylhydrolase activity","type":"related"},{"name":"guanosine triphosphate cyclohydrolase II","type":"related"}],"termid":"GO:0003935","terms_by_termid":{"GO:0003935":null}}


id: PBO:0071985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 14","termid":"PBO:0071985"}


id: PBO:0002821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set3 complex subunit Snt1","termid":"PBO:0002821"}


id: PBO:0001548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom70 (predicted)","termid":"PBO:0001548"}


id: PBO:0015212
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(2)","termid":"PBO:0015212"}


id: GO:0021928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of neuroblasts that will give rise to basket cells. A cerebellar basket cell is an inhibitory GABAergic interneuron found in the cerebellar cortex.","definition_xrefs":["GOC:dph","GO_REF:0000021","PMID:15157725","GOC:dgh","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation in hindbrain ventricular zone","termid":"GO:0021923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basket cell precursor proliferation","termid":"GO:0021928"}


id: PBO:0047335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibulin 1","termid":"PBO:0047335"}


id: PBO:0029259
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitotic_G1/S_phase_transition_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0029259"}


id: GO:0006901
data:
  {"annotated_genes":["SJAG_03268","SJAG_00284","SJAG_04391","SJAG_04615","SJAG_00906"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89287,113826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048205"},{"annotations":[91588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048208"},{"annotations":[104803,106189],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0003400"}]},"cv_name":"biological_process","definition":"A protein coat is added to the vesicle to form the proper shape of the vesicle and to target the vesicle for transport to its destination.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"part_of","term_name":"vesicle budding from membrane","termid":"GO:0006900"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00284":null,"SJAG_00906":null,"SJAG_03268":null,"SJAG_04391":null,"SJAG_04615":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192","GO:0061024"],"is_obsolete":false,"name":"vesicle coating","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vesicle coat assembly","type":"broad"}],"termid":"GO:0006901","terms_by_termid":{"GO:0003400":null,"GO:0048205":null,"GO:0048208":null}}


id: PBO:0059051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific nuclear structural 1","termid":"PBO:0059051"}


id: PBO:0054464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1863","termid":"PBO:0054464"}


id: PBO:0040014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARMC2 antisense RNA 1","termid":"PBO:0040014"}


id: PBO:0075852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 2 interacting protein","termid":"PBO:0075852"}


id: PBO:0063010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet activating factor acetylhydrolase 2","termid":"PBO:0063010"}


id: PBO:0029998
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_P-bodies","termid":"PBO:0029998"}


id: GO:1902355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any endothelial tube lumen extension that is involved in blood vessel lumen ensheathment.","definition_xrefs":["GOC:TermGenie","PMID:23698350","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial tube lumen extension","termid":"GO:0097498"},{"relation_name":"part_of","term_name":"blood vessel lumen ensheathment","termid":"GO:0097496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial tube lumen extension involved in blood vessel lumen ensheathment","termid":"GO:1902355"}


id: GO:0036370
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding a D-alanine and presenting it for processing or offloading to a cognate enzyme. Covalently binds the D-alanine via a phosphopantetheine prosthetic group and mediates protein-protein interactions with the enzyme conferring specificity. The carrier protein provides an essential link between the D-alanine-D-alanyl carrier protein ligase and the incorporation of D-alanine into lipoteichoic acid by transferring activated D-alanine to cell membrane phosphatidylglycerol (PG).","definition_xrefs":["GOC:crds","PMID:22750871","PMID:11222605","PMID:8682792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphopantetheine-dependent carrier activity","termid":"GO:0140414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140104"],"is_obsolete":false,"name":"D-alanyl carrier activity","synonyms":[{"name":"D-alanyl carrier protein","type":"related"}],"termid":"GO:0036370"}


id: PBO:0088878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex III assembly protein Cbp3","termid":"PBO:0088878"}


id: PBO:0090029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase binding protein Rid1","termid":"PBO:0090029"}


id: PBO:0076302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYNGAP1 antisense RNA 1","termid":"PBO:0076302"}


id: PBO:0059189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS related GPR family member E","termid":"PBO:0059189"}


id: PBO:0027723
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_prospore_membrane","termid":"PBO:0027723"}


id: PBO:0045166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A1","termid":"PBO:0045166"}


id: GO:0034589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of hydroxyproline into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:14502423","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"modified amino acid transport","termid":"GO:0072337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"hydroxyproline transport","synonyms":[{"name":"4-hydroxyproline transport","type":"exact"},{"name":"L-hydroxyproline transport","type":"narrow"}],"termid":"GO:0034589"}


id: PBO:0030215
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_alpha,alpha-trehalase_activity_increase_during_cellular_response_to_oxidative_stress","termid":"PBO:0030215"}


id: GO:0085022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of its host organism, mediated by a substance secreted by a type VI secretion system in the organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host morphology or physiology via protein secreted by type VI secretion system (obsolete GO:0085022)","termid":"GO:0085022"}


id: FYPO:0007455
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of double-strand break repair via single-strand annealing is increased.","definition_xrefs":["PomBase:mah","GO:0045002"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair during vegetative growth","termid":"FYPO:0000777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000293","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"increased double-strand break repair via single-strand annealing","synonyms":[{"name":"increased double-strand break repair via SSA","type":"exact"},{"name":"increased double-strand break repair via single-strand annealing during mitotic cell cycle","type":"related"},{"name":"increased double-strand break repair via single-strand annealing during vegetative growth","type":"exact"},{"name":"increased error-prone double strand break repair","type":"broad"}],"termid":"FYPO:0007455"}


id: GO:0001543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Disruption of theca cell layer releasing follicular fluid and/or the oocyte.","direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"part_of","term_name":"ovulation from ovarian follicle","termid":"GO:0001542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovarian follicle rupture","termid":"GO:0001543"}


id: PBO:0088155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vesicle membrane protein (v-SNARE) with acyltransferase activity; involved in trafficking to and within the Golgi, endocytic trafficking to the vacuole, and vacuolar fusion; membrane localization due to prenylation at the carboxy-terminus; human homolog YKT6 can complement yeast ykt6 mutant","termid":"PBO:0088155"}


id: GO:0008673
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-dehydro-3-deoxy-D-gluconate + ATP = 2-dehydro-3-deoxy-6-phospho-D-gluconate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.45","RHEA:14797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"2-dehydro-3-deoxygluconokinase activity","secondary_identifiers":["MetaCyc:DEOXYGLUCONOKIN-RXN","KEGG_REACTION:R01541"],"synonyms":[{"name":"2-keto-3-deoxy-D-gluconic acid kinase activity","type":"related"},{"name":"2-keto-3-deoxygluconate kinase activity","type":"related"},{"name":"2-keto-3-deoxygluconokinase (phosphorylating)","type":"related"},{"name":"2-keto-3-deoxygluconokinase activity","type":"related"},{"name":"3-deoxy-2-oxo-D-gluconate kinase activity","type":"related"},{"name":"ATP:2-dehydro-3-deoxy-D-gluconate 6-phosphotransferase activity","type":"related"},{"name":"KDG kinase activity","type":"related"},{"name":"ketodeoxygluconokinase activity","type":"related"}],"termid":"GO:0008673"}


id: PATO:0001653
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An alignment quality inhering in a bearer by virtue of the bearer's being in a proper spatial positioning with respect to an additional entity.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alignment","termid":"PATO:0001652"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aligned with","synonyms":[{"name":"aligned ","type":"exact"},{"name":"aligned to","type":"related"}],"termid":"PATO:0001653"}


id: FYPO:0000774
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of pre-replicative complex assembly is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal pre-replicative complex assembly","termid":"FYPO:0000773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000293","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased pre-replicative complex assembly","synonyms":[{"name":"decreased pre-RC assembly","type":"exact"},{"name":"decreased pre-replicative complex assembly during mitotic cell cycle","type":"related"},{"name":"decreased pre-replicative complex assembly during vegetative growth","type":"exact"},{"name":"decreased pre-replicative complex formation","type":"exact"},{"name":"reduced pre-replicative complex assembly","type":"exact"}],"termid":"FYPO:0000774"}


id: PBO:0051079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 7-27","termid":"PBO:0051079"}


id: GO:0010977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites).","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron projection development","termid":"GO:0010975"},{"relation_name":"is_a","term_name":"negative regulation of cell projection organization","termid":"GO:0031345"},{"relation_name":"negatively_regulates","term_name":"neuron projection development","termid":"GO:0031175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuron projection development","synonyms":[{"name":"growth cone collapse","type":"related"},{"name":"negative regulation of neurite biosynthesis","type":"narrow"},{"name":"negative regulation of neurite development","type":"narrow"},{"name":"negative regulation of neurite formation","type":"narrow"},{"name":"negative regulation of neurite growth","type":"narrow"}],"termid":"GO:0010977"}


id: GO:0051678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pullulan, a neutral linear polysaccharide composed of repeating units of maltotriose joined by alpha-(1,6)-linkages.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan catabolic process","termid":"GO:0009251"},{"relation_name":"is_a","term_name":"pullulan metabolic process","termid":"GO:0051676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"pullulan catabolic process","termid":"GO:0051678"}


id: FYPO:0001199
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular calcium level","synonyms":[{"name":"normal cellular calcium accumulation","type":"related"},{"name":"normal cellular calcium ion level","type":"exact"},{"name":"normal cellular calcium level during mitotic cell cycle","type":"related"},{"name":"normal cellular calcium level during vegetative growth","type":"exact"}],"termid":"FYPO:0001199"}


id: PR:Q96WV2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCPB16A4.02c gene.","definition_xrefs":["UniProtKB:Q96WV2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized PH domain-containing protein PB16A4.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCPB16A4.02c","synonyms":[{"name":"Spom972h-SPCPB16A4.02c","type":"exact"}],"termid":"PR:Q96WV2"}


id: PBO:0045340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyhypusine hydroxylase","termid":"PBO:0045340"}


id: PBO:0057241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 432","termid":"PBO:0057241"}


id: PBO:0035963
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4_acetylation_at_centromere_central_core_during_vegetative_growth","termid":"PBO:0035963"}


id: PBO:0072562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS related 2","termid":"PBO:0072562"}


id: GO:0075265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of oogonium development, a process that leads to the formation of a female gametangium of oomycetes, containing one or more gametes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of oogonium development","termid":"GO:0075264"},{"relation_name":"positively_regulates","term_name":"oogonium development","termid":"GO:0075263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of oogonium development","termid":"GO:0075265"}


id: FYPO:0007678
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which the distribution of sterols in cellular membranes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:32320462","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal membrane lipid distribution","termid":"FYPO:0006546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal sterol distribution","termid":"FYPO:0007678"}


id: GO:0030265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipase C-activating receptor G protein-coupled receptor signaling pathway that starts with an opsin being activated by a photon, and transmitting the signal through the Gq-mediated activation of phospholipase C (PLC). PLC hydrolyses phosphatidylinositol 4,5-bisphosphate (PIP2) into the second messengers inositol-1,4,5,-triphosphate (IP3) and diacylglycerol (DAG). The second messengers, including cGMP, activate channels that result in transmission of the light signal  through the synapses. Typical examples are rhabdomeric photoreceptors in the eyes of protostomes.","definition_xrefs":["PMID:19720651","PMID:22498302","PMID:8823931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"},{"relation_name":"is_a","term_name":"G protein-coupled opsin signaling pathway","termid":"GO:0016056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"phospholipase C-activating opsin-mediated signaling pathway","synonyms":[{"name":"PLC-activating rhodopsin mediated signaling pathway","type":"narrow"},{"name":"phospholipase C-activating rhodopsin mediated G-protein coupled receptor signaling pathway","type":"narrow"},{"name":"phospholipase C-activating rhodopsin mediated signaling pathway","type":"narrow"},{"name":"rhodopsin mediated G protein signaling, coupled to IP3 second messenger","type":"narrow"},{"name":"rhodopsin mediated G protein signalling, coupled to IP3 second messenger","type":"narrow"},{"name":"rhodopsin mediated G-protein signaling, coupled to IP3 second messenger","type":"narrow"},{"name":"rhodopsin mediated G-protein signalling, coupled to IP3 second messenger","type":"narrow"}],"termid":"GO:0030265"}


id: GO:0051000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the activity of the enzyme nitric-oxide synthase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of monooxygenase activity","termid":"GO:0032770"},{"relation_name":"is_a","term_name":"regulation of nitric-oxide synthase activity","termid":"GO:0050999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nitric-oxide synthase activity","synonyms":[{"name":"NOS activator","type":"exact"},{"name":"activation of nitric-oxide synthase activity","type":"narrow"},{"name":"nitric-oxide synthase activator","type":"exact"},{"name":"positive regulation of NOS activity","type":"exact"},{"name":"stimulation of nitric-oxide synthase activity","type":"narrow"},{"name":"up regulation of nitric-oxide synthase activity","type":"exact"},{"name":"up-regulation of nitric-oxide synthase activity","type":"exact"},{"name":"upregulation of nitric-oxide synthase activity","type":"exact"}],"termid":"GO:0051000"}


id: PBO:0056941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR9-1 host gene","termid":"PBO:0056941"}


id: GO:0045141
data:
  {"annotated_genes":["SJAG_05260","SJAG_05226","SJAG_03092","SJAG_03685","SJAG_01777","SJAG_00756","SJAG_01263","SJAG_03287","SJAG_03680","SJAG_01538","SJAG_05196"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83475,92790,102012,112027,113643,113780],"is_not":false,"summary":null,"term":"GO:0045141"},{"annotations":[102011,85840],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"},{"annotations":[95985,98897,83474,85841,101164],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032121"},{"annotations":[102013,110071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044821"}]},"cv_name":"biological_process","definition":"The cell cycle process in which the dynamic reorganization of telomeres occurs in early meiotic prophase, during which meiotic chromosome ends are gathered in a bouquet arrangement at the inner surface of the nuclear envelope proximal to the spindle pole body. This plays an important role in progression through meiosis and precedes synapsis.","definition_xrefs":["GOC:vw","PMID:10690419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere localization","termid":"GO:0034397"},{"relation_name":"is_a","term_name":"chromosome organization involved in meiotic cell cycle","termid":"GO:0070192"},{"relation_name":"is_a","term_name":"chromosome localization to nuclear envelope involved in homologous chromosome segregation","termid":"GO:0090220"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00756":null,"SJAG_01263":null,"SJAG_01538":null,"SJAG_01777":null,"SJAG_03092":null,"SJAG_03287":null,"SJAG_03680":null,"SJAG_03685":null,"SJAG_05196":null,"SJAG_05226":null,"SJAG_05260":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0140013","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"meiotic telomere clustering","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"bouquet biosynthesis","type":"narrow"},{"name":"bouquet formation","type":"narrow"}],"termid":"GO:0045141","terms_by_termid":{"GO:0032121":null,"GO:0044821":null,"GO:0045141":null,"GO:0070197":null}}


id: GO:1990914
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plasma membrane consisting of the gene products that penetrate only the periplasmic side of the membrane.","definition_xrefs":["PMID:15919996","GOC:bhm"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of periplasmic side of plasma membrane (obsolete GO:1990914)","termid":"GO:1990914"}


id: GO:0071987
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a WD40 repeat domain of a protein. The WD40 repeat is a short structural motif of approximately 40 amino acids, often terminating in a tryptophan-aspartic acid (W-D) dipeptide. Several of these repeats are combined to form a type of protein domain called the WD domain.","definition_xrefs":["InterPro:IPR017986","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"WD40-repeat domain binding","synonyms":[{"name":"WD domain binding","type":"exact"},{"name":"beta-transducin repeat domain binding","type":"exact"}],"termid":"GO:0071987"}


id: PBO:0069680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 957, pseudogene","termid":"PBO:0069680"}


id: GO:0071397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cholesterol stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to sterol","termid":"GO:0036315"},{"relation_name":"is_a","term_name":"response to cholesterol","termid":"GO:0070723"},{"relation_name":"is_a","term_name":"cellular response to alcohol","termid":"GO:0097306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cholesterol","termid":"GO:0071397"}


id: PBO:0028490
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-separate_mitotic_half_spindles_present","termid":"PBO:0028490"}


id: GO:0033569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of lactoferrin from one side of a membrane to the other.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transmembrane transporter activity","termid":"GO:0008320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0140318"}],"interesting_parent_ids":["GO:0003674","GO:0140318","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"lactoferrin transmembrane transporter activity","termid":"GO:0033569"}


id: FYPO:0007390
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which spindle pole body (SPB)-led chromosome movement in mitotic interphase takes place at an angle that varies more than normal. Normally, the SPB oscillation angle remains nearly parallel to the long axis of the cell.","definition_xrefs":["PMID:18495844","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle pole body-led chromosome movement during mitotic interphase","termid":"FYPO:0005348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased variability of angle of spindle pole body-led chromosome movement during mitotic interphase","synonyms":[{"name":"increased variability of angle of SPB-led chromosome movement during mitotic interphase","type":"exact"},{"name":"increased variability of angle of mitotic SPB oscillation during mitotic interphase","type":"exact"},{"name":"increased variability of angle of mitotic spindle pole body movement during mitotic interphase","type":"exact"},{"name":"increased variability of angle of mitotic spindle pole body oscillation during mitotic interphase","type":"exact"},{"name":"increased variability of angle of spindle pole body-led chromosome movement during interphase of mitotic cell cycle","type":"exact"},{"name":"increased variability of angle of spindle pole body-led chromosome movement during mitotic interphase during vegetative growth","type":"exact"},{"name":"variable trajectory angle of SPB oscillation","type":"related"}],"termid":"FYPO:0007390"}


id: PBO:0003839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-isopropylmalate dehydrogenase Leu1","termid":"PBO:0003839"}


id: PBO:0013104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP Sap62","termid":"PBO:0013104"}


id: PBO:0045698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Tctex-type 3 pseudogene 2","termid":"PBO:0045698"}


id: PBO:0059129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPHOSPH6 divergent transcript","termid":"PBO:0059129"}


id: PBO:0052685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 9","termid":"PBO:0052685"}


id: GO:0048660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of smooth muscle cell proliferation.","definition_xrefs":["GOC:ebc","CL:0000192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"smooth muscle cell proliferation","termid":"GO:0048659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of smooth muscle cell proliferation","synonyms":[{"name":"regulation of SMC proliferation","type":"exact"}],"termid":"GO:0048660"}


id: PBO:0058103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4318","termid":"PBO:0058103"}


id: GO:0018832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the elimination of HCl from a chloropropanol, yielding an epoxypropane.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete halohydrin hydrogen-halide-lyase B activity (obsolete GO:0018832)","termid":"GO:0018832"}


id: PBO:0067673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 854, pseudogene","termid":"PBO:0067673"}


id: PBO:0087923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor that recruits Mediator and Swi/Snf complexes; activates transcription of genes expressed at the M/G1 phase boundary and in G1 phase; required for expression of the HO gene controlling mating type switching; localization to nucleus occurs during G1 and appears to be regulated by phosphorylation by Cdc28p kinase; SWI5 has a paralog, ACE2, that arose from the whole genome duplication","termid":"PBO:0087923"}


id: FYPO:0002998
data:
  {"alleles_by_uniquename":{"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115643,115647],"is_not":false,"summary":null,"term":"FYPO:0002998"}]},"cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the assembly and distribution of actin filaments and associated proteins does not occur, resulting in the failure to form an actomyosin contractile ring, and in which medial cortical nodes form irregular clumps instead of coalescing into the medial cortex ring.","definition_xrefs":["PMID:24127216","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished actomyosin contractile ring assembly","termid":"FYPO:0001009"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02592":null},"genotype_count":1,"genotypes_by_uniquename":{"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0004803","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000032"],"is_obsolete":false,"name":"abolished actomyosin contractile ring assembly, clumped medial cortical nodes","references_by_uniquename":{"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02592"],"single_locus_genotype_uniquenames":["sty1delta"],"synonyms":[{"name":"abolished actomyosin contractile ring assembly, clumped cytokinesis nodes","type":"exact"},{"name":"abolished actomyosin contractile ring assembly, clumped medial cortical nodes during mitotic cell cycle","type":"related"},{"name":"abolished actomyosin contractile ring assembly, clumped medial cortical nodes, during vegetative growth","type":"exact"},{"name":"abolished actomyosin contractile ring formation, clumped medial cortical nodes","type":"related"},{"name":"abolished contractile ring assembly, clumped medial cortical nodes","type":"exact"},{"name":"abolished cytokinetic contractile ring assembly, clumped medial cortical nodes","type":"exact"},{"name":"abolished cytokinetic ring assembly, clumped medial cortical nodes","type":"related"},{"name":"abolished cytokinetic ring formation, clumped medial cortical nodes","type":"related"},{"name":"abolished mitotic contractile ring assembly, clumped medial cortical nodes","type":"exact"},{"name":"actomyosin contractile ring assembly abolished, clumped medial cortical nodes","type":"exact"},{"name":"cytokinesis defects, contractile ring actin, absent, with clumped medial cortical nodes","type":"related"}],"termid":"FYPO:0002998","terms_by_termid":{"FYECO:0000248":null,"FYPO:0002998":null,"FYPO_EXT:0000001":null}}


id: GO:0051491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the assembly of a filopodium, a thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone.","definition_xrefs":["GOC:dph","GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of filopodium assembly","termid":"GO:0051489"},{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"positively_regulates","term_name":"filopodium assembly","termid":"GO:0046847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of filopodium assembly","synonyms":[{"name":"activation of filopodium formation","type":"narrow"},{"name":"positive regulation of filopodia biosynthesis","type":"exact"},{"name":"positive regulation of filopodia formation","type":"exact"},{"name":"positive regulation of filopodium formation","type":"exact"},{"name":"stimulation of filopodium formation","type":"narrow"},{"name":"up regulation of filopodium formation","type":"exact"},{"name":"up-regulation of filopodium formation","type":"exact"},{"name":"upregulation of filopodium formation","type":"exact"}],"termid":"GO:0051491"}


id: GO:0061506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of a DNA topological transformation by transiently cleaving a pair of complementary DNA strands to form a gate through which a second double-stranded DNA segment is passed, after which the severed strands in the first DNA segment are rejoined; product release is not coupled to ATP binding and hydrolysis; changes the linking number in multiples of 2.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA topoisomerase type II (ATP-independent) activity (obsolete GO:0061506)","termid":"GO:0061506"}


id: PBO:0048378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated RAB2B interactor family member 3","termid":"PBO:0048378"}


id: GO:0008014
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A calcium-dependent cell adhesion protein (type I membrane protein) that interacts in a homophilic manner in cell-cell interactions.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium-dependent cell adhesion molecule activity (obsolete GO:0008014)","synonyms":[{"name":"cadherin","type":"narrow"},{"name":"calcium-dependent cell adhesion molecule activity","type":"exact"}],"termid":"GO:0008014"}


id: PBO:0073770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 3","termid":"PBO:0073770"}


id: GO:0018113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine = D-lysine.","definition_xrefs":["EC:5.1.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"lysine racemase activity","secondary_identifiers":["RHEA:22864","MetaCyc:LYSINE-RACEMASE-RXN"],"termid":"GO:0018113"}


id: GO:0001064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains a single-subunit-type RNA polymerase-specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed 5'-3' RNA polymerase activity","termid":"GO:0003899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016779","GO:0140098"],"is_obsolete":false,"name":"single subunit type RNA polymerase activity","synonyms":[{"name":"T3/T7 type RNA polymerase activity","type":"exact"}],"termid":"GO:0001064"}


id: PBO:0004782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotrimeric G protein gamma subunit Git11","termid":"PBO:0004782"}


id: GO:0023053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a mechanical signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by mechanical effect (obsolete GO:0023053)","synonyms":[{"name":"signal initiation by mechanical effect","type":"exact"}],"termid":"GO:0023053"}


id: MOD:01046
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 3'-chloro-L-tyrosine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monochlorinated L-tyrosine","termid":"MOD:01028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-chloro-L-tyrosine","synonyms":[{"name":"3'-ClTyr","type":"exact"}],"termid":"MOD:01046"}


id: GO:1905495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of G-quadruplex DNA binding.","definition_xrefs":["PMID:26503245","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA binding","termid":"GO:0043388"},{"relation_name":"is_a","term_name":"regulation of G-quadruplex DNA binding","termid":"GO:1905493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of G-quadruplex DNA binding","synonyms":[{"name":"activation of G quadruplex DNA binding","type":"narrow"},{"name":"activation of G quartet DNA binding","type":"narrow"},{"name":"activation of G-DNA binding","type":"narrow"},{"name":"activation of G-quadruplex DNA binding","type":"narrow"},{"name":"activation of G-quartet DNA binding","type":"narrow"},{"name":"activation of quadruplex DNA binding","type":"narrow"},{"name":"activation of tetraplex DNA binding","type":"narrow"},{"name":"positive regulation of G quadruplex DNA binding","type":"exact"},{"name":"positive regulation of G quartet DNA binding","type":"exact"},{"name":"positive regulation of G-DNA binding","type":"exact"},{"name":"positive regulation of G-quartet DNA binding","type":"exact"},{"name":"positive regulation of quadruplex DNA binding","type":"exact"},{"name":"positive regulation of tetraplex DNA binding","type":"exact"},{"name":"up regulation of G quadruplex DNA binding","type":"exact"},{"name":"up regulation of G quartet DNA binding","type":"exact"},{"name":"up regulation of G-DNA binding","type":"exact"},{"name":"up regulation of G-quadruplex DNA binding","type":"exact"},{"name":"up regulation of G-quartet DNA binding","type":"exact"},{"name":"up regulation of quadruplex DNA binding","type":"exact"},{"name":"up regulation of tetraplex DNA binding","type":"exact"},{"name":"up-regulation of G quadruplex DNA binding","type":"exact"},{"name":"up-regulation of G quartet DNA binding","type":"exact"},{"name":"up-regulation of G-DNA binding","type":"exact"},{"name":"up-regulation of G-quadruplex DNA binding","type":"exact"},{"name":"up-regulation of G-quartet DNA binding","type":"exact"},{"name":"up-regulation of quadruplex DNA binding","type":"exact"},{"name":"up-regulation of tetraplex DNA binding","type":"exact"},{"name":"upregulation of G quadruplex DNA binding","type":"exact"},{"name":"upregulation of G quartet DNA binding","type":"exact"},{"name":"upregulation of G-DNA binding","type":"exact"},{"name":"upregulation of G-quadruplex DNA binding","type":"exact"},{"name":"upregulation of G-quartet DNA binding","type":"exact"},{"name":"upregulation of quadruplex DNA binding","type":"exact"},{"name":"upregulation of tetraplex DNA binding","type":"exact"}],"termid":"GO:1905495"}


id: GO:1900541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fumonisin.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"fumonisin metabolic process","termid":"GO:1900539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"fumonisin biosynthetic process","synonyms":[{"name":"fumonisin anabolism","type":"exact"},{"name":"fumonisin biosynthesis","type":"exact"},{"name":"fumonisin formation","type":"exact"},{"name":"fumonisin synthesis","type":"exact"}],"termid":"GO:1900541"}


id: GO:0002037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-glutamate import into a cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of L-glutamate import across plasma membrane","termid":"GO:0002036"},{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"negatively_regulates","term_name":"L-glutamate import across plasma membrane","termid":"GO:0098712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of L-glutamate import across plasma membrane","secondary_identifiers":["GO:1900921"],"synonyms":[{"name":"down regulation of L-glutamate import","type":"exact"},{"name":"down regulation of L-glutamate transport","type":"broad"},{"name":"down regulation of L-glutamate uptake","type":"related"},{"name":"down-regulation of L-glutamate import","type":"exact"},{"name":"down-regulation of L-glutamate transport","type":"broad"},{"name":"down-regulation of L-glutamate uptake","type":"related"},{"name":"downregulation of L-glutamate import","type":"exact"},{"name":"downregulation of L-glutamate transport","type":"broad"},{"name":"downregulation of L-glutamate uptake","type":"related"},{"name":"inhibition of L-glutamate import","type":"narrow"},{"name":"inhibition of L-glutamate transport","type":"narrow"},{"name":"inhibition of L-glutamate uptake","type":"narrow"},{"name":"negative regulation of L-glutamate import","type":"broad"},{"name":"negative regulation of L-glutamate transport","type":"broad"},{"name":"negative regulation of L-glutamate uptake","type":"related"},{"name":"regulation of L-glutamate import","type":"broad"}],"termid":"GO:0002037"}


id: PBO:0090781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor zf-C2H2 type","termid":"PBO:0090781"}


id: GO:0097173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N-acetylmuramic acid (MurNAc), a monosaccharide derivative of N-acetylglucosamine.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"N-acetylmuramic acid metabolic process","termid":"GO:0097172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"N-acetylmuramic acid catabolic process","synonyms":[{"name":"N-acetylmuramate breakdown","type":"exact"},{"name":"N-acetylmuramate catabolic process","type":"exact"},{"name":"N-acetylmuramate catabolism","type":"exact"},{"name":"N-acetylmuramate degradation","type":"exact"},{"name":"N-acetylmuramic acid breakdown","type":"exact"},{"name":"N-acetylmuramic acid catabolism","type":"exact"},{"name":"N-acetylmuramic acid degradation","type":"exact"}],"termid":"GO:0097173"}


id: GO:0086005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An action potential that occurs in a ventricular cardiac muscle cell.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell action potential involved in contraction","termid":"GO:0086002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular cardiac muscle cell action potential","termid":"GO:0086005"}


id: GO:0140917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed import of zinc(2+) from the cytosol, across an organelle membrane, into a mitochondrion.","definition_xrefs":["PMID:21289295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion import into organelle","termid":"GO:0062111"},{"relation_name":"is_a","term_name":"import into the mitochondrion","termid":"GO:0170036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"zinc ion import into mitochondrion","termid":"GO:0140917"}


id: GO:0019431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of acetyl-CoA from ethanol via acetaldehyde.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ethanol metabolic process","termid":"GO:0006067"},{"relation_name":"is_a","term_name":"acetyl-CoA biosynthetic process","termid":"GO:0006085"},{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0055086","GO:0008150","GO:0006091"],"is_obsolete":false,"name":"acetyl-CoA biosynthetic process from ethanol","secondary_identifiers":["MetaCyc:PWY66-21","MetaCyc:PWY66-161","MetaCyc:PWY66-162","MetaCyc:ETOH-ACETYLCOA-ANA-PWY"],"synonyms":[{"name":"acetyl-CoA anabolism from ethanol","type":"exact"},{"name":"acetyl-CoA formation from ethanol","type":"exact"},{"name":"acetyl-CoA synthesis from ethanol","type":"exact"}],"termid":"GO:0019431"}


id: PBO:0041564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 85","termid":"PBO:0041564"}


id: PBO:0042150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 11","termid":"PBO:0042150"}


id: GO:0035024
data:
  {"annotated_genes":["SJAG_04462"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101406],"is_not":false,"summary":null,"term":"GO:0035024"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of Rho protein signal transduction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Rho protein signal transduction","termid":"GO:0035023"},{"relation_name":"is_a","term_name":"negative regulation of small GTPase mediated signal transduction","termid":"GO:0051058"},{"relation_name":"negatively_regulates","term_name":"Rho protein signal transduction","termid":"GO:0007266"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04462":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of Rho protein signal transduction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of Rho protein signal transduction","type":"exact"},{"name":"down-regulation of Rho protein signal transduction","type":"exact"},{"name":"downregulation of Rho protein signal transduction","type":"exact"},{"name":"inhibition of Rho protein signal transduction","type":"narrow"}],"termid":"GO:0035024","terms_by_termid":{"GO:0035024":null}}


id: GO:0009292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The introduction of genetic information into a cell to create a genetically different individual, without production of new individuals.","definition_xrefs":["PMID:26184597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"horizontal gene transfer","synonyms":[{"name":"genetic exchange","type":"broad"},{"name":"genetic transfer","type":"exact"},{"name":"lateral gene transfer","type":"exact"}],"termid":"GO:0009292"}


id: PBO:0085512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S15A and bacterial S8; RPS22A has a paralog, RPS22B, that arose from the whole genome duplication","termid":"PBO:0085512"}


id: PBO:0071694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L38","termid":"PBO:0071694"}


id: PBO:0076330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYS1 golgi trafficking protein","termid":"PBO:0076330"}


id: PBO:0072073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 3","termid":"PBO:0072073"}


id: PBO:0051093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 3P (pseudogene)","termid":"PBO:0051093"}


id: PBO:0087664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the inner nuclear membrane Asi ubiquitin ligase complex; Asi complex targets both misfolded proteins of the inner nuclear membrane-associated degradation (INMAD) pathway and regulators of sterol biosynthesis for ubiquitin-mediated degradation; acts with Asi1p and Asi2p to ensure the fidelity of SPS-sensor signaling by targeting latent unprocessed forms of Stp1p and Stp2p, maintaining the repressed state of gene expression in the absence of inducing amino acids","termid":"PBO:0087664"}


id: GO:1990803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein phosphorylation process involved in localizing a protein to the spindle microtubule.","definition_xrefs":["GOC:rb","GOC:TermGenie","GO_REF:0000060","PMID:22521784"],"gene_count":0,"genotype_count":0,"name":"obsolete protein phosphorylation involved in protein localization to spindle microtubule (obsolete GO:1990803)","synonyms":[{"name":"protein amino acid phosphorylation involved in protein localisation in spindle microtubule","type":"exact"},{"name":"protein amino acid phosphorylation involved in protein localisation to spindle microtubule","type":"exact"},{"name":"protein amino acid phosphorylation involved in protein localization in spindle microtubule","type":"exact"},{"name":"protein amino acid phosphorylation involved in protein localization to spindle microtubule","type":"exact"},{"name":"protein phosphorylation involved in protein localisation in spindle microtubule","type":"exact"},{"name":"protein phosphorylation involved in protein localisation to spindle microtubule","type":"exact"},{"name":"protein phosphorylation involved in protein localization in spindle microtubule","type":"exact"}],"termid":"GO:1990803"}


id: PBO:0066972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 275","termid":"PBO:0066972"}


id: FYPO:0002401
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain more microtubule bundles than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"},{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000054","FYPO:0002399","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"microtubule bundles present in increased numbers","synonyms":[{"name":"extra microtubule bundles","type":"exact"},{"name":"increased level of MT bundles","type":"exact"},{"name":"increased microtubule bundling","type":"related"},{"name":"increased number of microtubule bundles","type":"exact"},{"name":"microtubule arrays present in increased numbers","type":"related"},{"name":"microtubule bundles present in greater numbers","type":"exact"}],"termid":"FYPO:0002401"}


id: PBO:0049350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 8","termid":"PBO:0049350"}


id: _global:inversely_associated_with
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"q1 inversely_associated_with q2 iff q1 is dependent on q2, and the magnitude of q1 decreases if the magnitude of q2 is increased, or the magnitude of q1 increases if the magnitude of q2 is decreased. The relationship is not necessarily linear.","definition_xrefs":["PATOC:cjm","Wikipedia:Association_(statistics)"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversely_associated_with","termid":"_global:inversely_associated_with"}


id: PBO:0063089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progestin and adipoQ receptor family member 7","termid":"PBO:0063089"}


id: PBO:0081306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 90 pseudogene 1","termid":"PBO:0081306"}


id: PBO:0072823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1","termid":"PBO:0072823"}


id: PBO:0057363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ag-1","termid":"PBO:0057363"}


id: GO:0003855
data:
  {"annotated_genes":["SJAG_00337"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87164],"is_not":false,"summary":null,"term":"GO:0003855"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-dehydroquinate = 3-dehydroshikimate + H2O.","definition_xrefs":["RHEA:21096","EC:4.2.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00337":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"3-dehydroquinate dehydratase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R03084","MetaCyc:3-DEHYDROQUINATE-DEHYDRATASE-RXN"],"synonyms":[{"name":"3-dehydroquinase activity","type":"related"},{"name":"3-dehydroquinate hydro-lyase (3-dehydroshikimate-forming)","type":"related"},{"name":"3-dehydroquinate hydro-lyase activity","type":"related"},{"name":"3-dehydroquinate hydrolase activity","type":"related"},{"name":"5-dehydroquinase activity","type":"related"},{"name":"5-dehydroquinate dehydratase activity","type":"related"},{"name":"5-dehydroquinate hydro-lyase activity","type":"related"},{"name":"DHQase","type":"related"},{"name":"dehydroquinase activity","type":"related"},{"name":"dehydroquinate dehydratase activity","type":"related"}],"termid":"GO:0003855","terms_by_termid":{"GO:0003855":null}}


id: PBO:0080514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASF1 pseudogene 1","termid":"PBO:0080514"}


id: PBO:0001068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol binding ankyrin repeat protein (predicted)","termid":"PBO:0001068"}


id: GO:0006373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete 3'-splice site cleavage, exon ligation (obsolete GO:0006373)","synonyms":[{"name":"3'-splice site cleavage, exon ligation","type":"exact"}],"termid":"GO:0006373"}


id: _global:causal_relation_between_entities
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"_global:causally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causal_relation_between_entities","secondary_identifiers":["RO:0002506"],"termid":"_global:causal_relation_between_entities"}


id: PBO:0059975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 20","termid":"PBO:0059975"}


id: PR:Q9URW3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPJ691.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URW3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein yippee-like PJ691.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPJ691.02","synonyms":[{"name":"Spom972h-SPAPJ691.02","type":"exact"}],"termid":"PR:Q9URW3"}


id: GO:0042613
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane protein complex composed of an MHC class II alpha and MHC class II beta chain, and with or without a bound peptide or polysaccharide antigen.","definition_xrefs":["ISBN:0120781859","PMID:15928678","GOC:add","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex","termid":"GO:0042611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"MHC class II protein complex","termid":"GO:0042613"}


id: MOD:02003
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydroxy hydrogen atom of L-serine with an acyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O3-acylated L-serine","termid":"MOD:02003"}


id: GO:0099501
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding an exocytic vesicle.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle membrane","termid":"GO:0030658"},{"relation_name":"part_of","term_name":"exocytic vesicle","termid":"GO:0070382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"exocytic vesicle membrane","synonyms":[{"name":"secretory vesicle membrane","type":"broad"}],"termid":"GO:0099501"}


id: GO:0034527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,2-dihydroxy-8-carboxynaphthalene + O2 = 2-carboxy-2-hydroxy-8-carboxychromene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,2-dihydroxy-8-carboxynaphthalene dioxygenase activity (obsolete GO:0034527)","termid":"GO:0034527"}


id: GO:0009516
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A colorless plastid involved in the synthesis of monoterpenes.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"leucoplast","secondary_identifiers":["Wikipedia:Leucoplast"],"termid":"GO:0009516"}


id: GO:0046216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of indole phytoalexins, any indole compound produced by plants as part of their defense response.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole-containing compound catabolic process","termid":"GO:0042436"},{"relation_name":"is_a","term_name":"indole phytoalexin metabolic process","termid":"GO:0046217"},{"relation_name":"is_a","term_name":"detoxification of nitrogen compound","termid":"GO:0051410"},{"relation_name":"is_a","term_name":"phytoalexin catabolic process","termid":"GO:0052316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0044248","GO:0098754","GO:0008150"],"is_obsolete":false,"name":"indole phytoalexin catabolic process","synonyms":[{"name":"indole phytoalexin breakdown","type":"exact"},{"name":"indole phytoalexin catabolism","type":"exact"},{"name":"indole phytoalexin degradation","type":"exact"}],"termid":"GO:0046216"}


id: RO:0002215
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a material entity (such as a cell) and a process, in which the material entity has the ability to carry out the process. ","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of_part_of","termid":"RO:0002216"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of","termid":"RO:0002215"}


id: GO:0036228
data:
  {"annotated_genes":["SJAG_02757","SJAG_02210"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96483,102219],"is_not":false,"summary":null,"term":"GO:0036228"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the nuclear inner membrane.","definition_xrefs":["PMID:16929305","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"is_a","term_name":"protein localization to nuclear envelope","termid":"GO:0090435"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02210":null,"SJAG_02757":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to nuclear inner membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein targeting to INM","type":"related"},{"name":"protein targeting to nuclear inner membrane","type":"related"}],"termid":"GO:0036228","terms_by_termid":{"GO:0036228":null}}


id: PBO:0113313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in proteolytic activation of Rim101p; part of response to alkaline pH; PalA/AIP1/Alix family member; interaction with the ESCRT-III subunit Snf7p suggests a relationship between pH response and multivesicular body formation; localizes to cytosol, nucleus and peroxisomes","termid":"PBO:0113313"}


id: GO:0030566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Specifies the site of a posttranscriptional modification in an snRNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["PMID:12457565","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"},{"relation_name":"is_a","term_name":"RNA modification guide activity","termid":"GO:0030555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"snRNA modification guide activity","termid":"GO:0030566"}


id: PBO:0090209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Cox1 translational activator Tac1","termid":"PBO:0090209"}


id: GO:0052143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism in response to a specific chemical concentration gradient on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete chemotaxis on or near host involved in symbiotic interaction (obsolete GO:0052143)","synonyms":[{"name":"chemotaxis on or near host during symbiotic interaction","type":"related"}],"termid":"GO:0052143"}


id: PBO:0082242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of cytoplasmic phenylalanyl-tRNA synthetase; forms a tetramer with Frs1p to form active enzyme; evolutionarily distant from mitochondrial phenylalanyl-tRNA synthetase based on protein sequence, but substrate binding is similar","termid":"PBO:0082242"}


id: GO:0010754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of cGMP-mediated signaling.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cGMP-mediated signaling","termid":"GO:0010752"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"cGMP-mediated signaling","termid":"GO:0019934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of cGMP-mediated signaling","synonyms":[{"name":"negative regulation of cGMP-mediated signalling","type":"exact"}],"termid":"GO:0010754"}


id: GO:0071216
data:
  {"annotated_genes":["SJAG_04332","SJAG_04140","SJAG_01805","SJAG_00082","SJAG_01837","SJAG_04183","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86074,107279,112772,98458,89873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[100237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072429"},{"annotations":[98469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072441"},{"annotations":[86079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072479"},{"annotations":[98470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990820"},{"annotations":[90615,98471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to biotic stimulus","termid":"GO:0009607"},{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null,"SJAG_04183":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to biotic stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular response to biotic stress","type":"narrow"}],"termid":"GO:0071216","terms_by_termid":{"GO:0072429":null,"GO:0072435":null,"GO:0072441":null,"GO:0072479":null,"GO:0140429":null,"GO:1990820":null}}


id: GO:0051125
data:
  {"annotated_genes":["SJAG_03455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of actin nucleation, the initial step in the formation of an actin filament in which actin monomers combine to form a new filament.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament organization","termid":"GO:0110053"},{"relation_name":"regulates","term_name":"actin nucleation","termid":"GO:0045010"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"regulation of actin nucleation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051125","terms_by_termid":{"GO:0034316":null}}


id: GO:0009944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process resulting in the establishment of polarity along the adaxial/abaxial axis. Adaxial refers to being situated toward an axis of an anatomical structure. Abaxial refers to being situated away from an axis of an anatomical structure.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of axis polarity","termid":"GO:0065001"},{"relation_name":"part_of","term_name":"adaxial/abaxial axis specification","termid":"GO:0009943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polarity specification of adaxial/abaxial axis","termid":"GO:0009944"}


id: PBO:0030802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_microtubule_cytoskeleton_during_vegetative_growth","termid":"PBO:0030802"}


id: GO:0061799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate = cyclic pyranopterin phosphate + diphosphate.","definition_xrefs":["GOC:dph","GOC:ik","PMID:25896388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"cyclic pyranopterin monophosphate synthase activity","secondary_identifiers":["RHEA:49580","EC:4.6.1.17","MetaCyc:RXN-17809"],"termid":"GO:0061799"}


id: GO:0047695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoin = 2 benzaldehyde.","definition_xrefs":["EC:4.1.2.38","RHEA:21460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"benzoin aldolase activity","secondary_identifiers":["KEGG_REACTION:R00027","MetaCyc:BENZOIN-ALDOLASE-RXN"],"synonyms":[{"name":"2-hydroxy-1,2-diphenylethanone benzaldehyde-lyase 2-hydroxy-1,2- activity","type":"related"},{"name":"2-hydroxy-1,2-diphenylethanone benzaldehyde-lyase 2-hydroxy-1,2-diphenylethanone benzaldehyde-lyase (benzaldehyde-forming)","type":"related"},{"name":"2-hydroxy-1,2-diphenylethanone benzaldehyde-lyase 2-hydroxy-1,2-diphenylethanone benzaldehyde-lyase activity","type":"related"},{"name":"benzaldehyde lyase activity","type":"related"},{"name":"diphenylethanone benzaldehyde-lyase activity","type":"related"}],"termid":"GO:0047695"}


id: GO:1905630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a glyceraldehyde stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:11377826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to monosaccharide","termid":"GO:0034284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to glyceraldehyde","termid":"GO:1905630"}


id: PBO:0045893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 gamma pseudogene 5","termid":"PBO:0045893"}


id: GO:0009452
data:
  {"annotated_genes":["SJAG_01724","SJAG_04488","SJAG_01713","SJAG_04034"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112843,95048,104290,103765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006370"},{"annotations":[59437],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0106005"}]},"cv_name":"biological_process","definition":"The sequence of enzymatic reactions by which the RNA 5' cap structure, an inverted 7-methylguanosine linked via a 5'-5' triphosphate bridge (m7G(5')ppp(5')X) to the first transcribed residue, is added to a nascent transcript. Additional methylation can occur on the ribose sugars of the first and second nucleotides adjacent to the m7G nRNA cap. These methylations are often referred to as N6,2'-O-dimethyladenosine (m6,2A) and N6,2'-O-dimethylguanosine (m6,2G), respectively.","definition_xrefs":["PMID:9266685","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA capping","termid":"GO:0036260"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01713":null,"SJAG_01724":null,"SJAG_04034":null,"SJAG_04488":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"7-methylguanosine RNA capping","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"RNA capping","type":"broad"},{"name":"m(7)G RNA capping","type":"exact"}],"termid":"GO:0009452","terms_by_termid":{"GO:0006370":null,"GO:0106005":null}}


id: PBO:0071532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 35","termid":"PBO:0071532"}


id: PBO:0004522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 2' O-ribose methyltransferase Mrm2 (predicted)","termid":"PBO:0004522"}


