# terms

id: GO:0015306
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sialate(out) + cation(out) = sialate(in) + cation(in).","definition_xrefs":["TC:2.A.1.14.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialic acid transmembrane transporter activity","termid":"GO:0015136"},{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"sialate:monoatomic cation symporter activity","synonyms":[{"name":"cation/sialate symporter activity","type":"exact"},{"name":"cation:sialate symporter activity","type":"exact"},{"name":"sialate transporter activity","type":"broad"},{"name":"sialate/cation symporter activity","type":"exact"},{"name":"sialate:cation symporter activity","type":"broad"}],"termid":"GO:0015306"}


id: PBO:0087581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C); APC/C is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition","termid":"PBO:0087581"}


id: PR:Q09697
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A SLIT-ROBO Rho GTPase-activating protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00225","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho-GTPase-activating protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13A11.01c","secondary_identifiers":["UniProtKB:Q09697"],"synonyms":[{"name":"Spom972h-SRGAP1","type":"exact"}],"termid":"PR:Q09697"}


id: GO:0014825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the fundus of stomach. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The fundus is the portion of the stomach that lies above the cardiac notch.","definition_xrefs":["MA:0001612","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal stomach smooth muscle contraction","termid":"GO:0014847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomach fundus smooth muscle contraction","termid":"GO:0014825"}


id: PBO:0003702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II large subunit Rpb1","termid":"PBO:0003702"}


id: PBO:0080918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAQ pseudogene 7","termid":"PBO:0080918"}


id: MOD:00508
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["PubMed:14588022","Unimod:140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISD a-series (C-Term)","synonyms":[{"name":"ISD a-series (C-Term)","type":"related"},{"name":"a-type-ion","type":"related"}],"termid":"MOD:00508"}


id: FYPO:0001789
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is normal (i.e. indistinguishable from wild type) during a cellular response to oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000138","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to nucleus during cellular response to oxidative stress","synonyms":[{"name":"normal protein localisation to nucleus during cellular response to oxidative stress","type":"exact"},{"name":"normal protein localization to nucleus during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"normal protein localization to nucleus during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"normal protein localization to nucleus during oxidative stress","type":"exact"},{"name":"normal protein localization to nucleus during oxidative stress response","type":"exact"}],"termid":"FYPO:0001789"}


id: PBO:0058140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4436b-2","termid":"PBO:0058140"}


id: PBO:0060970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transcription factor Y subunit beta","termid":"PBO:0060970"}


id: GO:0021762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the substantia nigra over time from its initial formation until its mature state. The substantia nigra is the layer of gray substance that separates the posterior parts of the cerebral peduncles (tegmentum mesencephali) from the anterior parts; it normally includes a posterior compact part with many pigmented cells (pars compacta) and an anterior reticular part whose cells contain little pigment (pars reticularis).","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:jid","ISBN:0838580343","GOC:cls","GOC:dph","ISBN:0878937420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"midbrain development","termid":"GO:0030901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"substantia nigra development","termid":"GO:0021762"}


id: PBO:0029966
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_hydroxyurea","termid":"PBO:0029966"}


id: PBO:0029011
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromosome_during_vegetative_growth","termid":"PBO:0029011"}


id: GO:0055116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results in entry into reproductive diapause. Reproductive diapause is a form of diapause where the organism itself will remain fully active, including feeding and other routine activities, but the reproductive organs experience a tissue-specific reduction in metabolism, with characteristic triggering and releasing stimuli.","definition_xrefs":["GOC:ds","GOC:jid","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"entry into diapause","termid":"GO:0055115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry into reproductive diapause","termid":"GO:0055116"}


id: GO:0048850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the hypophysis are generated and organized. The pituitary gland is an endocrine gland that secretes hormones that regulate many other glands.","definition_xrefs":["GOC:dgh","GOC:jid","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland morphogenesis","termid":"GO:0022612"},{"relation_name":"part_of","term_name":"pituitary gland development","termid":"GO:0021983"},{"relation_name":"part_of","term_name":"diencephalon morphogenesis","termid":"GO:0048852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypophysis morphogenesis","synonyms":[{"name":"pituitary gland morphogenesis","type":"exact"}],"termid":"GO:0048850"}


id: GO:0035493
data:
  {"annotated_genes":["SJAG_03403"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101758],"is_not":false,"summary":null,"term":"GO:0035493"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a SNARE complex, a protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers.","definition_xrefs":["PMID:10872468","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"vesicle fusion","termid":"GO:0006906"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03403":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0016192","GO:0061024","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"SNARE complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0035493","terms_by_termid":{"GO:0035493":null}}


id: PBO:0070914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 22","termid":"PBO:0070914"}


id: PBO:0012218
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_movement_of","termid":"PBO:0012218"}


id: PBO:0064503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POLR2D pseudogene 2","termid":"PBO:0064503"}


id: GO:0001845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the fusion of a phagosome, a vesicle formed by phagocytosis, with a lysosome.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome organization","termid":"GO:0007040"},{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"part_of","term_name":"phagocytosis","termid":"GO:0006909"},{"relation_name":"part_of","term_name":"phagosome maturation","termid":"GO:0090382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"phagolysosome assembly","synonyms":[{"name":"late phagosome biosynthesis","type":"related"},{"name":"late phagosome formation","type":"related"},{"name":"phagolysosome formation","type":"related"}],"termid":"GO:0001845"}


id: PBO:0079280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase","termid":"PBO:0079280"}


id: FYPO:0006042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic metaphase chromosome recapture is increased.","definition_xrefs":["PomBase:mah","PMID:27146110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic metaphase chromosome recapture","termid":"FYPO:0005362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0001320","FYPO:0005447","FYPO:0000641","FYPO:0000631","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased rate of mitotic metaphase chromosome recapture","synonyms":[{"name":"decreased time to mitotic metaphase chromosome recapture","type":"related"},{"name":"increased rate of chromosome recapture during mitosis","type":"exact"},{"name":"increased rate of chromosome recapture during mitotic metaphase","type":"exact"},{"name":"increased rate of kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"increased rate of metaphase chromosome recapture during mitotic cell cycle","type":"related"},{"name":"increased rate of mitotic kinetochore retrieval","type":"exact"},{"name":"increased rate of mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"increased rate of mitotic metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"increased rate of mitotic sister kinetochore recapture","type":"exact"}],"termid":"FYPO:0006042"}


id: PR:P87242
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An HD domain-containing protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04312","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HD domain-containing protein C4G3.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.17","secondary_identifiers":["UniProtKB:P87242"],"synonyms":[{"name":"Spom972h-HDDC2","type":"exact"}],"termid":"PR:P87242"}


id: GO:0098814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The low level of synaptic transmission that occurs via spontaneous neurotransmitter release into the synaptic cleft in the absence of a presynaptic action potential.","definition_xrefs":["PMID:20200227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"spontaneous synaptic transmission","synonyms":[{"name":"basal synaptic transmission","type":"exact"}],"termid":"GO:0098814"}


id: PBO:0042214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin L2","termid":"PBO:0042214"}


id: GO:0019178
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + NADP+ = NAD+ + phosphate.","definition_xrefs":["RHEA:28050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"NADP phosphatase activity","secondary_identifiers":["MetaCyc:RXN-5822","EC:3.1.3.108"],"termid":"GO:0019178"}


id: GO:0021854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the hypothalamus region of the forebrain, from its initial formation to its mature state.","definition_xrefs":["GOC:jid","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"diencephalon development","termid":"GO:0021536"},{"relation_name":"part_of","term_name":"limbic system development","termid":"GO:0021761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypothalamus development","termid":"GO:0021854"}


id: PBO:0111874
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC transporter family","termid":"PBO:0111874"}


id: PBO:0048492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCSH pseudogene 4","termid":"PBO:0048492"}


id: PR:O59679
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A rho guanine nucleotide exchange factor 38 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03117","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rho guanine nucleotide exchange factor gef3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.17","secondary_identifiers":["UniProtKB:O59679"],"synonyms":[{"name":"Spom972h-ARHGEF38","type":"exact"}],"termid":"PR:O59679"}


id: PATO:0001719
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality which holds by virtue of whether the bearer exhibits the ability to receive another agentitive entity.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral quality","termid":"PATO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptivity","termid":"PATO:0001719"}


id: GO:1900113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H3-K9 trimethylation.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K9 trimethylation (obsolete GO:1900113)","synonyms":[{"name":"down regulation of histone H3-K9 trimethylation","type":"exact"},{"name":"down-regulation of histone H3-K9 trimethylation","type":"exact"},{"name":"downregulation of histone H3-K9 trimethylation","type":"exact"},{"name":"inhibition of histone H3-K9 trimethylation","type":"narrow"}],"termid":"GO:1900113"}


id: GO:0005743
data:
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id: GO:2000384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of ectoderm development.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of ectoderm development","termid":"GO:2000383"},{"relation_name":"negatively_regulates","term_name":"ectoderm development","termid":"GO:0007398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ectoderm development","termid":"GO:2000384"}


id: GO:0030039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA unwinding factor (obsolete GO:0030039)","synonyms":[{"name":"DNA unwinding factor","type":"exact"}],"termid":"GO:0030039"}


id: PBO:0000660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase Spb1 (predicted)","termid":"PBO:0000660"}


id: GO:0021850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of glioblasts in the subpallium. These cells will give rise to oligodendrocytes.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:cls","GOC:dph","GOC:jid","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glioblast division","termid":"GO:0048860"},{"relation_name":"part_of","term_name":"subpallium cell proliferation in forebrain","termid":"GO:0022012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"subpallium glioblast cell division","synonyms":[{"name":"glioblast cell division in subpallium","type":"exact"},{"name":"glioblast division in ventral telencephalon","type":"exact"}],"termid":"GO:0021850"}


id: PBO:0004068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase complex subunit Pst1","termid":"PBO:0004068"}


id: PBO:0062983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proton activated chloride channel 1","termid":"PBO:0062983"}


id: PBO:0071352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 11","termid":"PBO:0071352"}


id: PBO:0052270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 4D","termid":"PBO:0052270"}


id: BFO:0000063
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x precedes y if and only if the time point at which x ends is before or equivalent to the time point at which y starts. Formally: x precedes y iff ω(x) <= α(y), where α is a function that maps a process to a start point, and ω is a function that maps a process to an end point.","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"precedes","termid":"BFO:0000063"}


id: GO:0014057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of acetylcholine.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter secretion","termid":"GO:0001956"},{"relation_name":"is_a","term_name":"regulation of acetylcholine secretion, neurotransmission","termid":"GO:0014056"},{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission, cholinergic","termid":"GO:0032224"},{"relation_name":"is_a","term_name":"positive regulation of amine transport","termid":"GO:0051954"},{"relation_name":"positively_regulates","term_name":"acetylcholine secretion, neurotransmission","termid":"GO:0014055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"positive regulation of acetylcholine secretion, neurotransmission","synonyms":[{"name":"activation of acetylcholine secretion","type":"narrow"},{"name":"stimulation of acetylcholine secretion","type":"narrow"},{"name":"up regulation of acetylcholine secretion","type":"exact"},{"name":"up-regulation of acetylcholine secretion","type":"exact"},{"name":"upregulation of acetylcholine secretion","type":"exact"}],"termid":"GO:0014057"}


id: PBO:0054012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1342","termid":"PBO:0054012"}


id: PBO:0068056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 361","termid":"PBO:0068056"}


id: GO:0022412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring at the cellular level, that is involved in the reproductive function of a multicellular organism.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular process involved in reproduction in multicellular organism","synonyms":[{"name":"reproductive cellular process in multicellular organism","type":"exact"}],"termid":"GO:0022412"}


id: PBO:0086896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transporter; member of the sugar porter family; non-essential gene; overexpression results in elevated colony sectoring, an indicator of chromosomal instability","termid":"PBO:0086896"}


id: PBO:0079800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member B11","termid":"PBO:0079800"}


id: GO:0072750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a leptomycin B stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to fatty acid","termid":"GO:0071398"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"response to leptomycin B","termid":"GO:1901344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to leptomycin B","termid":"GO:0072750"}


id: PBO:0001937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell end marker Tea3","termid":"PBO:0001937"}


id: GO:0032264
data:
  {"annotated_genes":["SJAG_04123","SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89812,97872],"is_not":false,"summary":null,"term":"GO:0032264"}]},"cv_name":"biological_process","definition":"Any process which produces inosine monophosphate from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IMP biosynthetic process","termid":"GO:0006188"},{"relation_name":"is_a","term_name":"purine ribonucleotide salvage","termid":"GO:0106380"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04123":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"IMP salvage","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032264","terms_by_termid":{"GO:0032264":null}}


id: SO:0002057
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0002057 intronic_splicing_enhancer (obsolete SO:0002057)","synonyms":[{"name":"ISE","type":"exact"}],"termid":"SO:0002057"}


id: PBO:0065618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 phosphatase activator","termid":"PBO:0065618"}


id: PBO:0064778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periplakin","termid":"PBO:0064778"}


id: PR:Q10255
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC56F8.07 gene.","definition_xrefs":["UniProtKB:Q10255","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein SPAC56F8.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.07","synonyms":[{"name":"Spom972h-SPAC56F8.07","type":"exact"}],"termid":"PR:Q10255"}


id: PBO:0005544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA export factor Rsm1","termid":"PBO:0005544"}


id: PBO:0068465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 42, pseudogene","termid":"PBO:0068465"}


id: GO:2000316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T-helper 17 type immune response.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002822"},{"relation_name":"regulates","term_name":"T-helper 17 type immune response","termid":"GO:0072538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T-helper 17 type immune response","synonyms":[{"name":"regulation of Th17 immune response","type":"exact"}],"termid":"GO:2000316"}


id: GO:0141104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont initiates, promotes, or enhances a G protein-coupled receptor signal transduction pathway in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:15963708","PMID:18978047","PMID:25332123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated activation of host signal transduction pathway","termid":"GO:0052028"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host G protein-coupled receptor signal transduction pathway","termid":"GO:0075118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host G protein-coupled receptor signal transduction","termid":"GO:0141104"}


id: PBO:0072909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCAN domain containing 2 pseudogene","termid":"PBO:0072909"}


id: GO:0038155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-23 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-23-mediated signaling pathway","synonyms":[{"name":"IL-23-mediated signaling pathway","type":"exact"},{"name":"interleukin-23-mediated signalling pathway","type":"exact"}],"termid":"GO:0038155"}


id: GO:0045994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving iron that activates or increases the rate of translational initiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational initiation by iron","termid":"GO:0006447"},{"relation_name":"is_a","term_name":"positive regulation of translational initiation","termid":"GO:0045948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of translational initiation by iron","synonyms":[{"name":"activation of translational initiation by iron","type":"narrow"},{"name":"stimulation of translational initiation by iron","type":"narrow"},{"name":"up regulation of translational initiation by iron","type":"exact"},{"name":"up-regulation of translational initiation by iron","type":"exact"},{"name":"upregulation of translational initiation by iron","type":"exact"}],"termid":"GO:0045994"}


id: PBO:0048459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucagon","termid":"PBO:0048459"}


id: GO:1905181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of urease activity.","definition_xrefs":["GO_REF:0000059","PMID:16244137","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of urease activity","synonyms":[{"name":"regulation of urea amidohydrolase activity","type":"exact"}],"termid":"GO:1905181"}


id: GO:0050466
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which X-H and Y-H form X-Y and the acceptor is not disulfide or oxygen.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with other acceptors (obsolete GO:0050466)","synonyms":[{"name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with other acceptors","type":"exact"}],"termid":"GO:0050466"}


id: PBO:0086774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the cell periphery and vacuole; YCL048W-A has a paralog, YDR524C-B, that arose from the whole genome duplication","termid":"PBO:0086774"}


id: PBO:0071852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 47","termid":"PBO:0071852"}


id: RO:0003303
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between an entity (e.g. a genotype, genetic variation, chemical, or environmental exposure) and a condition (a phenotype or disease), where the entity has some causal role for the condition.","direct_ancestors":[{"relation_name":"is_a","term_name":"causes_or_contributes_to_condition","termid":"RO:0003302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causes_condition","termid":"RO:0003303"}


id: GO:0047790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: creatinine + H2O = N-methylhydantoin + NH3.","definition_xrefs":["EC:3.5.4.21","MetaCyc:CREATININE-DEAMINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"creatinine deaminase activity","secondary_identifiers":["RHEA:12681"],"synonyms":[{"name":"creatinine desiminase activity","type":"related"},{"name":"creatinine hydrolase","type":"broad"},{"name":"creatinine iminohydrolase activity","type":"related"}],"termid":"GO:0047790"}


id: PR:P87157
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A target of Myb protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor-binding protein C25H2.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.16c","secondary_identifiers":["UniProtKB:P87157"],"synonyms":[{"name":"Spom972h-TOM1","type":"exact"}],"termid":"PR:P87157"}


id: PBO:0059053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motor neuron and pancreas homeobox 1","termid":"PBO:0059053"}


id: GO:0061092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the translocation, or flipping, of phospholipid molecules from one monolayer of a membrane bilayer to the opposite monolayer.","definition_xrefs":["PMID:19966303","GOC:tb","GOC:dph","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of phospholipid translocation","termid":"GO:0061091"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid transport","termid":"GO:2001140"},{"relation_name":"positively_regulates","term_name":"phospholipid translocation","termid":"GO:0045332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phospholipid translocation","termid":"GO:0061092"}


id: GO:0090610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a bundle sheath cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:tb","PMID:24517883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bundle sheath cell fate specification","termid":"GO:0090610"}


id: PBO:0088194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc finger transcription factor; involved in the complex regulation of gene expression in response to levels of heme and oxygen; localizes to the mitochondrion as well as to the nucleus; the S288C sequence differs from other strain backgrounds due to a Ty1 insertion in the carboxy terminus","termid":"PBO:0088194"}


id: PBO:0089634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress-responsive DNA-binding transcription factor Prr1","termid":"PBO:0089634"}


id: GO:1902910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of melanosome transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:als","PMID:23334344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of melanosome transport","termid":"GO:1902908"},{"relation_name":"positively_regulates","term_name":"melanosome transport","termid":"GO:0032402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of melanosome transport","synonyms":[{"name":"activation of melanosome transport","type":"narrow"},{"name":"up regulation of melanosome transport","type":"exact"},{"name":"up-regulation of melanosome transport","type":"exact"},{"name":"upregulation of melanosome transport","type":"exact"}],"termid":"GO:1902910"}


id: PBO:0030600
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_substance_in_vacuole","termid":"PBO:0030600"}


id: SO:0001867
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene suspected of being involved in the expression of a trait.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate_gene","synonyms":[{"name":"candidate gene","type":"exact"},{"name":"target gene","type":"exact"}],"termid":"SO:0001867"}


id: PBO:0053065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"large tumor suppressor kinase 2","termid":"PBO:0053065"}


id: GO:0016732
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which an iron-sulfur protein acts as a hydrogen or electron donor and reduces dinitrogen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on iron-sulfur proteins as donors","termid":"GO:0016730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on iron-sulfur proteins as donors, dinitrogen as acceptor","secondary_identifiers":["EC:1.18.6.-"],"termid":"GO:0016732"}


id: PATO:0001566
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being spread out or scattered about or divided up.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distributed","secondary_identifiers":["PATO:0001513"],"synonyms":[{"name":"diffuse","type":"exact"},{"name":"scattered","type":"exact"}],"termid":"PATO:0001566"}


id: GO:0034556
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: o-nitrobenzoate + NADPH + H+ = o-hydroxylaminobenzoate + NADP+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete nitrobenzoate nitroreductase activity (obsolete GO:0034556)","termid":"GO:0034556"}


id: GO:0010090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of a hair cell (trichome) cell are generated and organized. This process occurs while the initially relatively unspecialized epidermal cell is acquiring the specialized features of a hair cell. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:tair_curators","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"trichome differentiation","termid":"GO:0010026"},{"relation_name":"part_of","term_name":"plant epidermis morphogenesis","termid":"GO:0090626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trichome morphogenesis","secondary_identifiers":["GO:0048272"],"synonyms":[{"name":"trichome cell morphogenesis during differentiation","type":"exact"}],"termid":"GO:0010090"}


id: PBO:0060651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor corepressor 1","termid":"PBO:0060651"}


id: GO:0180018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the cytoplasm and resulting in the breakdown of an RNA molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target rRNA truncated degradation intermediate.","definition_xrefs":["PMID:20368444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyadenylation-dependent RNA catabolic process","termid":"GO:0043633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasmic polyadenylation-dependent RNA catabolic process","termid":"GO:0180018"}


id: PBO:0057125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 208b","termid":"PBO:0057125"}


id: PBO:0061830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxoglutarate dehydrogenase","termid":"PBO:0061830"}


id: PBO:0027697
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_assembly_during_meiosis_II","termid":"PBO:0027697"}


id: GO:0005315
data:
  {"annotated_genes":["SJAG_00547","SJAG_01059","SJAG_01033","SJAG_04241","SJAG_00233","SJAG_00612"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90101,99851,100674,105755,108790,111862,112588],"is_not":false,"summary":null,"term":"GO:0005315"},{"annotations":[98921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"}]},"cv_name":"molecular_function","definition":"Enables the transfer of phosphate ions from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00233":null,"SJAG_00547":null,"SJAG_00612":null,"SJAG_01033":null,"SJAG_01059":null,"SJAG_04241":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"phosphate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:32823","GO:1901677","GO:0005317"],"synonyms":[{"name":"inorganic phosphate transmembrane transporter activity","type":"exact"}],"termid":"GO:0005315","terms_by_termid":{"GO:0005315":null,"GO:0140987":null}}


id: GO:0090358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of tryptophan metabolic process","termid":"GO:0090357"},{"relation_name":"positively_regulates","term_name":"tryptophan metabolic process","termid":"GO:0006568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"positive regulation of tryptophan metabolic process","synonyms":[{"name":"positive regulation of tryptophan metabolism","type":"exact"}],"termid":"GO:0090358"}


id: GO:0051245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of the cellular defense response.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular defense response","termid":"GO:0010185"},{"relation_name":"is_a","term_name":"negative regulation of defense response","termid":"GO:0031348"},{"relation_name":"negatively_regulates","term_name":"cellular defense response","termid":"GO:0006968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular defense response","synonyms":[{"name":"down regulation of cellular defense response","type":"exact"},{"name":"down-regulation of cellular defense response","type":"exact"},{"name":"downregulation of cellular defense response","type":"exact"},{"name":"inhibition of cellular defense response","type":"narrow"},{"name":"negative regulation of cellular defence response","type":"exact"}],"termid":"GO:0051245"}


id: PBO:0076217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sad1 and UNC84 domain containing 5","termid":"PBO:0076217"}


id: PBO:0090831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Has1","termid":"PBO:0090831"}


id: PR:Q9UR09
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psu1 gene.","definition_xrefs":["UniProtKB:Q9UR09","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted beta-glucosidase PSU1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.13c","synonyms":[{"name":"Spom972h-psu1","type":"exact"},{"name":"cell wall synthesis protein psu1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UR09"}


id: PBO:0032696
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_mitotic_spindle_elongation_during_anaphase_B","termid":"PBO:0032696"}


id: GO:0017071
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that forms a transmembrane channel through which cations ions may pass in response to an intracellular cyclic nucleotide binding to the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation channel complex","termid":"GO:0034703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"intracellular cyclic nucleotide activated cation channel complex","termid":"GO:0017071"}


id: FYECO:0000310
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells are first grown in minimal medium lacking glucose and are then allowed to recover in rich medium.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose starvation and recovery","termid":"FYECO:0000310"}


id: PBO:0070454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 11","termid":"PBO:0070454"}


id: PBO:0084331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin-associated protein; required for both karyogamy and mitotic spindle organization, interacts stably and specifically with Kar3p and may function to target this kinesin to a specific cellular role; locus encodes a long and short transcript with differing functions; CIK1 has a paralog, VIK1, that arose from the whole genome duplication","termid":"PBO:0084331"}


id: GO:0000353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a quadruple snRNP complex composed of the spliced leader (SL) RNA along with the U4/U6-U5 tri-snRNP complex. Interactions that may facilitate this include a duplex between the SL and U6 RNAs and interactions between the U5 RNA and the exon sequence at the 5' splice site within the SL RNA.","definition_xrefs":["GOC:krc","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"mRNA trans splicing, SL addition","termid":"GO:0045291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"formation of quadruple SL/U4/U5/U6 snRNP","termid":"GO:0000353"}


id: GO:0004753
data:
  {"annotated_genes":["SJAG_02388","SJAG_01061"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004754"},{"annotations":[105750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004755"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of N6-(L-1,3-dicarboxypropyl)-L-lysine to release an amino acid (lysine or glutamate), with the concomitant reduction of an electron acceptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01061":null,"SJAG_02388":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"saccharopine dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"lysine-2-oxoglutarate reductase activity","type":"related"},{"name":"lysine-ketoglutarate reductase activity","type":"related"}],"termid":"GO:0004753","terms_by_termid":{"GO:0004754":null,"GO:0004755":null}}


id: GO:0009438
data:
  {"annotated_genes":["SJAG_01596","SJAG_02106","SJAG_02960","SJAG_04726","SJAG_02988","SJAG_04674","SJAG_04404"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96386,98860,84042,108874,88491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019243"},{"annotations":[58886,60505,101090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061727"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving methylglyoxal, CH3-CO-CHO, the aldehyde of pyruvic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01596":null,"SJAG_02106":null,"SJAG_02960":null,"SJAG_02988":null,"SJAG_04404":null,"SJAG_04674":null,"SJAG_04726":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"methylglyoxal metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"methylglyoxal bypass","type":"narrow"},{"name":"methylglyoxal metabolism","type":"exact"},{"name":"methylglyoxal pathway","type":"narrow"}],"termid":"GO:0009438","terms_by_termid":{"GO:0019243":null,"GO:0061727":null}}


id: PATO:0000613
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's lacking orientation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"irregular spatial pattern","termid":"PATO:0000330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disoriented","termid":"PATO:0000613"}


id: PBO:0067009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 16, pseudogene","termid":"PBO:0067009"}


id: PR:G2TRP0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tam7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRP0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein tam7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.23","synonyms":[{"name":"Spom972h-tam7","type":"exact"},{"name":"transcripts altered in meiosis protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRP0"}


id: PBO:0062998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl arginine deiminase 4","termid":"PBO:0062998"}


id: GO:0102529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: apigenin + S-adenosyl-L-methionine = genkwanin + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:73071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"apigenin 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-14661"],"termid":"GO:0102529"}


id: GO:0018317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycosylation of a carbon atom of a peptidyl-tryptophan residue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein C-linked glycosylation","termid":"GO:0018103"},{"relation_name":"is_a","term_name":"peptidyl-tryptophan modification","termid":"GO:0018211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"protein C-linked glycosylation via tryptophan","synonyms":[{"name":"protein amino acid C-linked glycosylation via tryptophan","type":"exact"}],"termid":"GO:0018317"}


id: GO:0032137
data:
  {"annotated_genes":["SJAG_02226","SJAG_02748"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102120,112523],"is_not":false,"summary":null,"term":"GO:0032137"}]},"cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a G/T mispair.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatched DNA binding","termid":"GO:0030983"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02226":null,"SJAG_02748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"guanine/thymine mispair binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G/T mispair binding","type":"exact"},{"name":"T/G mispair binding","type":"exact"},{"name":"thymine/guanine mispair binding","type":"exact"}],"termid":"GO:0032137","terms_by_termid":{"GO:0032137":null}}


id: GO:0007396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Closure of the dorsal hole. Filopodia extending from each leading edge interdigitate at the dorsal midline and appear to prime the formation of adherens junctions between the two rows of leading edge cells. Newly formed septate junctions are also used to seal the dorsal hole.","definition_xrefs":["PMID:12147138","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"dorsal closure","termid":"GO:0007391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"suture of dorsal opening","termid":"GO:0007396"}


id: FYECO:0000013
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition that describes a defined growth medium, i.e. one in which all constituent substances and their concentrations are known.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth medium","termid":"FYECO:0000009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping defined medium","termid":"FYECO:0000013"}


id: GO:0044453
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the nuclear membrane, the envelope that surrounds the nucleus of eukaryotic cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear membrane part (obsolete GO:0044453)","termid":"GO:0044453"}


id: PBO:0049341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi","termid":"PBO:0049341"}


id: MOD:02059
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-valine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-valine residue","termid":"MOD:00920"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-valine residue","synonyms":[{"name":"XlnkVal","type":"exact"}],"termid":"MOD:02059"}


id: PBO:0001490
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.32","termid":"PBO:0001490"}


id: PBO:0045030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIS3 like 3'-5' exoribonuclease 2","termid":"PBO:0045030"}


id: GO:0043870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(2)-acetyl-L-aminoadipate-semialdehyde + NADP+ + phosphate = N(2)-acetyl-L-gamma-aminoadipyl phosphate + NADPH.","definition_xrefs":["RHEA:41948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"N-acetyl-gamma-aminoadipyl-phosphate reductase activity","secondary_identifiers":["MetaCyc:RXN-5183"],"synonyms":[{"name":"AGPR","type":"related"},{"name":"ArgC","type":"related"},{"name":"LysY","type":"related"},{"name":"N-acetyl-alpha-glutamyl-phosphate reductase activity","type":"exact"},{"name":"N-acetyl-aminoadipate semialdehyde dehydrogenase activity","type":"exact"},{"name":"NAGSA dehydrogenase activity","type":"broad"}],"termid":"GO:0043870"}


id: PBO:0052811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 77","termid":"PBO:0052811"}


id: PBO:0051934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inter-alpha-trypsin inhibitor heavy chain 5","termid":"PBO:0051934"}


id: PR:O94440
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC637.03 gene.","definition_xrefs":["UniProtKB:O94440","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C637.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.03","synonyms":[{"name":"Spom972h-SPAC637.03","type":"exact"}],"termid":"PR:O94440"}


id: GO:0007556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving juvenile hormone.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"regulation of hormone metabolic process","termid":"GO:0032350"},{"relation_name":"is_a","term_name":"regulation of secondary metabolic process","termid":"GO:0043455"},{"relation_name":"part_of","term_name":"instar larval or pupal development","termid":"GO:0002165"},{"relation_name":"regulates","term_name":"juvenile hormone metabolic process","termid":"GO:0006716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0019748"],"is_obsolete":false,"name":"regulation of juvenile hormone metabolic process","synonyms":[{"name":"regulation of juvenile hormone metabolism","type":"exact"}],"termid":"GO:0007556"}


id: PBO:0038883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase 9","termid":"PBO:0038883"}


id: GO:0019810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to putrescine, 1,4-diaminobutane, the polyamine formed by decarboxylation of ornithine and the metabolic precursor of spermidine and spermine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine binding","termid":"GO:0019808"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"putrescine binding","termid":"GO:0019810"}


id: PBO:0028709
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_meiotic_spindle_pole_body","termid":"PBO:0028709"}


id: PBO:0091309
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Starvation induced ArresT","termid":"PBO:0091309"}


id: FYPO:0002363
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H3 acetylation occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone acetylation during vegetative growth","termid":"FYPO:0000332"},{"relation_name":"is_a","term_name":"abnormal histone H3 acetylation during vegetative growth","termid":"FYPO:0002361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3 acetylation during vegetative growth","synonyms":[{"name":"increased histone H3 acetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002363"}


id: FYPO:0004393
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosomes or sister chromatids do not move towards the spindle poles at the same time during meiosis I, but instead one or more chromosomes remain distant from the spindle pole after the bulk of the DNA has separated. Segregation may stop before completing separation of chromosomes, or may eventually be completed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lagging meiotic chromosomes","termid":"FYPO:0002091"},{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"lagging chromosomes during meiosis I","synonyms":[{"name":"lagging chromosomes during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004393"}


id: PBO:0067586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 745, pseudogene","termid":"PBO:0067586"}


id: PBO:0082818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved NAD+ dependent histone deacetylase of the Sirtuin family; deacetylation targets are primarily nuclear proteins; required for telomere hypercluster formation in quiescent yeast cells; involved in regulation of lifespan; plays roles in silencing at HML, HMR, telomeres, and rDNA; negatively regulates initiation of DNA replication; functions as regulator of autophagy like mammalian homolog SIRT1, and also of mitophagy","termid":"PBO:0082818"}


id: PBO:0088569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP-independent ER targeting protein Snd3a","termid":"PBO:0088569"}


id: PBO:0056645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 15 pseudogene 6","termid":"PBO:0056645"}


id: PBO:0067074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 105, pseudogene","termid":"PBO:0067074"}


id: PBO:0085250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral ER membrane protein; putative ER chaperone required for the stability and function of nutrient permeases exposed to high pressure","termid":"PBO:0085250"}


id: PBO:0058172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4467","termid":"PBO:0058172"}


id: PBO:0044011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 alpha 1 like","termid":"PBO:0044011"}


id: PBO:0003160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase subunit E (predicted)","termid":"PBO:0003160"}


id: GO:0051316
data:
  {"annotated_genes":["SJAG_01837","SJAG_03437","SJAG_03217","SJAG_05266","SJAG_01775","SJAG_03683","SJAG_01371","SJAG_01211","SJAG_01224","SJAG_04076","SJAG_03989","SJAG_00794","SJAG_00418","SJAG_05220","SJAG_03220","SJAG_04508","SJAG_02731","SJAG_01805","SJAG_03327","SJAG_02346","SJAG_01278","SJAG_00918","SJAG_05319","SJAG_02814","SJAG_00678","SJAG_03926"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112747],"is_not":false,"summary":null,"term":"GO:0051316"},{"annotations":[83938,89886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051456"},{"annotations":[112762],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904967"},{"annotations":[94690,111996,112997,91372,85207,89867,106370,97393,87035,101527,93968,103559,104938,105199,98502,106411,110164,105945,96581,109297,91623,103879,85814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051455"}]},"cv_name":"biological_process","definition":"The cellular process in which spindle microtubules become physically associated with the proteins making up the kinetochore complex in meiosis.","definition_xrefs":["GOC:ai","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attachment of spindle microtubules to kinetochore","termid":"GO:0008608"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiotic metaphase chromosome alignment","termid":"GO:0051311"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00418":null,"SJAG_00678":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01278":null,"SJAG_01371":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02346":null,"SJAG_02731":null,"SJAG_02814":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03683":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04076":null,"SJAG_04508":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0007049"],"is_obsolete":false,"name":"attachment of meiotic spindle microtubules to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0051317"],"synonyms":[{"name":"attachment of spindle microtubules to kinetochore during meiosis","type":"related"},{"name":"attachment of spindle microtubules to kinetochore during meiotic chromosome segregation","type":"related"},{"name":"attachment of spindle microtubules to meiotic chromosome","type":"exact"}],"termid":"GO:0051316","terms_by_termid":{"GO:0051316":null,"GO:0051455":null,"GO:0051456":null,"GO:1904967":null}}


id: PBO:0035823
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_stress_responsive_gene_mRNA_during_vegetative_growth","termid":"PBO:0035823"}


id: GO:0015068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine + glycine = L-ornithine + guanidinoacetate.","definition_xrefs":["RHEA:13201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidinotransferase activity","termid":"GO:0015067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"glycine amidinotransferase activity","secondary_identifiers":["EC:2.1.4.1","Reactome:R-HSA-71275","MetaCyc:GLYCINE-AMIDINOTRANSFERASE-RXN"],"synonyms":[{"name":"L-arginine:glycine amidinotransferase activity","type":"related"},{"name":"arginine-glycine amidinotransferase activity","type":"related"},{"name":"arginine-glycine transamidinase activity","type":"related"},{"name":"glycine transamidinase activity","type":"related"}],"termid":"GO:0015068"}


id: PBO:0042987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint kinase 2","termid":"PBO:0042987"}


id: PBO:0004555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P subunit Rpr2 (predicted)","termid":"PBO:0004555"}


id: PBO:0091313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ABC1 kinase family protein, human ADCK5 ortholog, unknown role","termid":"PBO:0091313"}


id: PBO:0073172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1L family member 3","termid":"PBO:0073172"}


id: PBO:0082271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP deaminase; tetrameric enzyme that catalyzes the deamination of AMP to form IMP and ammonia; thought to be involved in regulation of intracellular purine (adenine, guanine, and inosine) nucleotide pools","termid":"PBO:0082271"}


id: GO:0071562
data:
  {"annotated_genes":["SJAG_00029"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105476],"is_not":false,"summary":null,"term":"GO:0071562"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a nucleus-vacuole junction (NVJ), membrane contact sites formed between the vacuole membrane and the outer nuclear membrane. In S. cerevisiae these contacts are mediated through direct physical interaction between Vac8p and Nvj1p. The NVJ plays roles in piecemeal microautophagy of the nucleus and in the cytoplasm-to-vacuole targeting pathway.","definition_xrefs":["PMID:28533415","GOC:jp","PMID:16709156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"organelle localization by membrane tethering","termid":"GO:0140056"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00029":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0140056","GO:0051179"],"is_obsolete":false,"name":"nucleus-vacuole junction assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NV junction assembly","type":"exact"},{"name":"NV junction formation","type":"exact"},{"name":"NVJ assembly","type":"exact"},{"name":"NVJ formation","type":"exact"},{"name":"nucleus-vacuole junction formation","type":"exact"}],"termid":"GO:0071562","terms_by_termid":{"GO:0071562":null}}


id: GO:0009459
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A cytochrome containing heme a.","definition_xrefs":["GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome a (obsolete GO:0009459)","synonyms":[{"name":"cytochrome a","type":"exact"}],"termid":"GO:0009459"}


id: GO:0061891
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of calcium ions (Ca2+).","definition_xrefs":["PMID:16005298","PMID:28151650","PMID:17020874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion sensor activity","termid":"GO:0140784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"}],"interesting_parent_ids":["GO:0003674","GO:0140299"],"is_obsolete":false,"name":"calcium ion sensor activity","termid":"GO:0061891"}


id: GO:0048807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of female genitalia are generated and organized.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genitalia morphogenesis","termid":"GO:0035112"},{"relation_name":"part_of","term_name":"female genitalia development","termid":"GO:0030540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female genitalia morphogenesis","synonyms":[{"name":"female genital morphogenesis","type":"related"}],"termid":"GO:0048807"}


id: GO:0034851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4,4-trimethyl-3-oxopentanoyl-CoA + CoASH = pivalyl-CoA + propanoyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4,4-trimethyl-3-oxopentanoyl-CoA 2-C-propanoyl transferase activity (obsolete GO:0034851)","termid":"GO:0034851"}


id: GO:0003851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acylsphing-4-enine + UDP-alpha-D-galactose = a beta-D-galactosyl-(1<->1')-N-acylsphing-4-enine + H+ + UDP.","definition_xrefs":["EC:2.4.1.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N-acylsphingosine galactosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.47-RXN","Reactome:R-HSA-6785933","RHEA:13093"],"synonyms":[{"name":"2-hydroxyacylsphingosine 1-beta-galactosyltransferase activity","type":"exact"}],"termid":"GO:0003851"}


id: PBO:0061389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 49","termid":"PBO:0061389"}


id: GO:1903069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ER-associated ubiquitin-dependent protein catabolic process.","definition_xrefs":["PMID:17872946","GOC:TermGenie","GO_REF:0000058","GOC:rph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ER-associated ubiquitin-dependent protein catabolic process (obsolete GO:1903069)","termid":"GO:1903069"}


id: PBO:0040047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPC1A pseudogene 3","termid":"PBO:0040047"}


id: GO:1900457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of brassinosteroid mediated signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:21855796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"brassinosteroid mediated signaling pathway","termid":"GO:0009742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of brassinosteroid mediated signaling pathway","synonyms":[{"name":"regulation of brassinosteroid mediated signalling","type":"exact"}],"termid":"GO:1900457"}


id: GO:0015527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glycerol phosphate(out) + phosphate(in) = glycerol phosphate(in) + phosphate(out).","definition_xrefs":["TC:2.A.1.4.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate:phosphate antiporter activity","termid":"GO:0015315"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"glycerol-phosphate:phosphate antiporter activity","synonyms":[{"name":"glycerol-phosphate:inorganic phosphate antiporter activity","type":"exact"}],"termid":"GO:0015527"}


id: GO:0004717
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete focal adhesion kinase activity (obsolete GO:0004717)","synonyms":[{"name":"FAK","type":"exact"},{"name":"focal adhesion kinase activity","type":"exact"}],"termid":"GO:0004717"}


id: PBO:0073175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein F","termid":"PBO:0073175"}


id: PBO:0001915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic phenylalanine-tRNA ligase alpha subunit Frs2 (predicted)","termid":"PBO:0001915"}


id: GO:0035003
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The most apical region of the lateral plasma membrane of an invertebrate epithelial cell. The subapical complex lies above the zonula adherens and the septate junction, and is comparable to the position of the tight junction of vertebrate cells.","definition_xrefs":["PMID:11752566","PMID:12500938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"apical junction complex","termid":"GO:0043296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"subapical complex","synonyms":[{"name":"SAC","type":"broad"}],"termid":"GO:0035003"}


id: GO:1904068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any G protein-coupled receptor signaling pathway that is involved in social behavior.","definition_xrefs":["PMID:22665789","GOC:kmv","GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"part_of","term_name":"social behavior","termid":"GO:0035176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"G protein-coupled receptor signaling pathway involved in social behavior","synonyms":[{"name":"G protein coupled receptor protein signaling pathway involved in cooperative behavior","type":"related"},{"name":"G protein coupled receptor protein signaling pathway involved in social behavior","type":"exact"},{"name":"G protein coupled receptor protein signaling pathway involved in social behaviour","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in cooperative behavior","type":"related"},{"name":"G protein coupled receptor protein signalling pathway involved in social behavior","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in social behaviour","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in cooperative behavior","type":"related"},{"name":"G-protein coupled receptor protein signal transduction involved in social behavior","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in social behaviour","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in cooperative behavior","type":"related"},{"name":"G-protein coupled receptor protein signaling pathway involved in social behavior","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in social behaviour","type":"exact"},{"name":"G-protein coupled receptor signaling pathway involved in cooperative behavior","type":"related"},{"name":"G-protein coupled receptor signaling pathway involved in social behavior","type":"exact"},{"name":"G-protein coupled receptor signaling pathway involved in social behaviour","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in cooperative behavior","type":"related"},{"name":"G-protein coupled receptor signalling pathway involved in social behavior","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in social behaviour","type":"exact"},{"name":"G-protein-coupled receptor protein signaling pathway involved in cooperative behavior","type":"related"},{"name":"G-protein-coupled receptor protein signaling pathway involved in social behavior","type":"exact"},{"name":"G-protein-coupled receptor protein signaling pathway involved in social behaviour","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in cooperative behavior","type":"related"},{"name":"G-protein-coupled receptor protein signalling pathway involved in social behavior","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in social behaviour","type":"exact"},{"name":"GPCR signaling pathway involved in cooperative behavior","type":"related"},{"name":"GPCR signaling pathway involved in social behavior","type":"exact"},{"name":"GPCR signaling pathway involved in social behaviour","type":"exact"},{"name":"GPCR signalling pathway involved in cooperative behavior","type":"related"},{"name":"GPCR signalling pathway involved in social behavior","type":"exact"},{"name":"GPCR signalling pathway involved in social behaviour","type":"exact"}],"termid":"GO:1904068"}


id: FYPO:0002820
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 in telomeric regions does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K9 methylation during vegetative growth","termid":"FYPO:0002566"},{"relation_name":"is_a","term_name":"abnormal histone methylation at telomere during vegetative growth","termid":"FYPO:0007375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished histone H3-K9 methylation at telomere during vegetative growth","synonyms":[{"name":"abolished histone H3 K9 methylation at telomere during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 methylation at telomere during mitotic cell cycle","type":"related"},{"name":"abolished histone H3-K9 methylation at telomeric region during vegetative growth","type":"exact"},{"name":"abolished histone H3K9me at telomere during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 methylation at telomere during vegetative growth","type":"exact"},{"name":"abolished telomeric histone H3-K9 methylation during vegetative growth","type":"exact"},{"name":"histone H3-K9 methylation abolished at telomere during vegetative growth","type":"exact"},{"name":"histone H3-K9 methylation absent at telomere during vegetative growth","type":"exact"}],"termid":"FYPO:0002820"}


id: PBO:0089312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall glucan glucosidase Exg2","termid":"PBO:0089312"}


id: PBO:0052717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 9","termid":"PBO:0052717"}


id: SO:0000107
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A single stranded oligo used for polymerase chain reaction.","direct_ancestors":[{"relation_name":"is_a","term_name":"primer","termid":"SO:0000112"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequencing_primer","synonyms":[{"name":"sequencing primer","type":"exact"}],"termid":"SO:0000107"}


id: PBO:0087601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the BLOC-1 complex involved in endosomal maturation; null mutant is sensitive to drug inducing secretion of vacuolar cargo; GFP-fusion protein localizes to the endosome","termid":"PBO:0087601"}


id: GO:0007034
data:
  {"annotated_genes":["SJAG_03005","SJAG_05207","SJAG_04070","SJAG_03976","SJAG_02240","SJAG_01876","SJAG_03756","SJAG_01598","SJAG_04912","SJAG_03970","SJAG_01229","SJAG_00181","SJAG_05245","SJAG_03511","SJAG_00916","SJAG_03347","SJAG_02049","SJAG_04489","SJAG_02117","SJAG_00900","SJAG_04552","SJAG_01913","SJAG_00108","SJAG_00208","SJAG_01242","SJAG_04822","SJAG_04349","SJAG_02234","SJAG_00299","SJAG_02587","SJAG_04643","SJAG_04936","SJAG_02912","SJAG_01367","SJAG_01360","SJAG_00777","SJAG_16459","SJAG_04902","SJAG_03072","SJAG_05303","SJAG_07012","SJAG_00416","SJAG_03892","SJAG_00204","SJAG_00821","SJAG_03403","SJAG_03848","SJAG_05210","SJAG_01809","SJAG_00380","SJAG_01488","SJAG_01281","SJAG_03385","SJAG_04023","SJAG_03442","SJAG_01586","SJAG_04047","SJAG_03137","SJAG_02315","SJAG_02584","SJAG_01324","SJAG_02811","SJAG_01088","SJAG_01981","SJAG_04966","SJAG_01080","SJAG_04931","SJAG_03726","SJAG_01527","SJAG_02349","SJAG_03963","SJAG_03250","SJAG_00301","SJAG_02453","SJAG_03783","SJAG_01645","SJAG_01445","SJAG_04024"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71032,85169,86222,98032,110583],"is_not":false,"summary":null,"term":"GO:0007034"},{"annotations":[87683,84078,87120,109375,110513,84155,84190,87549,101800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120113"},{"annotations":[113621,104850,88332,93213,95570,91846,107560,92944,97506,100129,86632,92193,104737,95971,105855,103424,114950,90247,84970,105228,106319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006896"},{"annotations":[105044,88045,96948,98193,101019,98042,86239,96374,106695,102604,87551,105858,88672,112979,107526,87684,84024,97178,102788,84192,94020,92611,96316,92025,100109,101757,105843,106946,114497,103683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045324"},{"annotations":[87685,108632,99207,99797,106264,110942,103180,94747,84678,94924,100188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032511"},{"annotations":[87056],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044395"},{"annotations":[100130,102790,86240,88164,84971,93464,97180,100111,98196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006623"},{"annotations":[105424,86611,101020,103425,84193,110776,88046,87552,105844,84026,96950,94022,106696,107527,87686,92027,112468,88333,102606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043328"}]},"cv_name":"biological_process","definition":"The directed movement of substances into, out of or within a vacuole.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":78,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00181":null,"SJAG_00204":null,"SJAG_00208":null,"SJAG_00299":null,"SJAG_00301":null,"SJAG_00380":null,"SJAG_00416":null,"SJAG_00777":null,"SJAG_00821":null,"SJAG_00900":null,"SJAG_00916":null,"SJAG_01080":null,"SJAG_01088":null,"SJAG_01229":null,"SJAG_01242":null,"SJAG_01281":null,"SJAG_01324":null,"SJAG_01360":null,"SJAG_01367":null,"SJAG_01445":null,"SJAG_01488":null,"SJAG_01527":null,"SJAG_01586":null,"SJAG_01598":null,"SJAG_01645":null,"SJAG_01809":null,"SJAG_01876":null,"SJAG_01913":null,"SJAG_01981":null,"SJAG_02049":null,"SJAG_02117":null,"SJAG_02234":null,"SJAG_02240":null,"SJAG_02315":null,"SJAG_02349":null,"SJAG_02453":null,"SJAG_02584":null,"SJAG_02587":null,"SJAG_02811":null,"SJAG_02912":null,"SJAG_03005":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03250":null,"SJAG_03347":null,"SJAG_03385":null,"SJAG_03403":null,"SJAG_03442":null,"SJAG_03511":null,"SJAG_03726":null,"SJAG_03756":null,"SJAG_03783":null,"SJAG_03848":null,"SJAG_03892":null,"SJAG_03963":null,"SJAG_03970":null,"SJAG_03976":null,"SJAG_04023":null,"SJAG_04024":null,"SJAG_04047":null,"SJAG_04070":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04552":null,"SJAG_04643":null,"SJAG_04822":null,"SJAG_04902":null,"SJAG_04912":null,"SJAG_04931":null,"SJAG_04936":null,"SJAG_04966":null,"SJAG_05207":null,"SJAG_05210":null,"SJAG_05245":null,"SJAG_05303":null,"SJAG_07012":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"vacuolar transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0007034","terms_by_termid":{"GO:0006623":null,"GO:0006896":null,"GO:0007034":null,"GO:0032511":null,"GO:0043328":null,"GO:0044395":null,"GO:0045324":null,"GO:0120113":null}}


id: PBO:0054453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1850","termid":"PBO:0054453"}


id: GO:0060638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from a mesenchymal cell to an epithelial cell where it is received and interpreted.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"mesenchymal-epithelial cell signaling","synonyms":[{"name":"mesenchymal-epithelial cell signalling","type":"exact"}],"termid":"GO:0060638"}


id: GO:0018502
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,5-dichloro-2,5-cyclohexadiene-1,4-diol + NAD+ = NADH + H+ + 2,5-dichlorohydroquinone.","definition_xrefs":["UM-BBD_reactionID:r0553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase activity","secondary_identifiers":["MetaCyc:LINC-RXN","RHEA:15741"],"termid":"GO:0018502"}


id: PBO:0038507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily D member 1 pseudogene 2","termid":"PBO:0038507"}


id: GO:0034900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-(N-formyl)-formiminopyruvate + H2O = 3-formiminopyruvate + formate.","definition_xrefs":["UM-BBD_reactionID:r1399"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-(N-formyl)-formiminopyruvate hydrolase activity (obsolete GO:0034900)","termid":"GO:0034900"}


id: PBO:0088522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit Pfd4","termid":"PBO:0088522"}


id: GO:0045092
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-18; comprises an alpha and a beta subunit.","definition_xrefs":["GOC:mah","PMID:12759435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"interleukin-18 receptor complex","synonyms":[{"name":"IL-18 receptor complex","type":"exact"}],"termid":"GO:0045092"}


id: GO:0052795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of alpha-(2->6)-glycosidic linkages of terminal sialic residues in substrates.","definition_xrefs":["GOC:mengo_curators","EC:3.2.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exo-alpha-sialidase activity","termid":"GO:0004308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"exo-alpha-(2->6)-sialidase activity","synonyms":[{"name":"exo-alpha-(2,6)-sialidase activity","type":"exact"},{"name":"exo-alpha-2,6-sialidase activity","type":"exact"}],"termid":"GO:0052795"}


id: GO:0061326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the renal tubule over time from its formation to the mature form. A renal tubule is a tube that filters, re-absorbs and secretes substances to rid an organism of waste and to play a role in fluid homeostasis.","definition_xrefs":["GOC:dph","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"renal system development","termid":"GO:0072001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal tubule development","termid":"GO:0061326"}


id: GO:1904559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dextromethorphan stimulus.","definition_xrefs":["GOC:mr","GOC:TermGenie","GO_REF:0000071","PMID:25796330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to isoquinoline alkaloid","termid":"GO:0071317"},{"relation_name":"is_a","term_name":"cellular response to ether","termid":"GO:0071362"},{"relation_name":"is_a","term_name":"response to dextromethorphan","termid":"GO:1904558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dextromethorphan","termid":"GO:1904559"}


id: PBO:0089255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4452 family conserved fungal protein","termid":"PBO:0089255"}


id: GO:0071359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a double-stranded RNA stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to dsRNA","termid":"GO:0043331"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to dsRNA","synonyms":[{"name":"cellular response to double-stranded RNA","type":"exact"}],"termid":"GO:0071359"}


id: GO:0009443
data:
  {"annotated_genes":["SJAG_00252","SJAG_00707","SJAG_01383"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95749,111767],"is_not":false,"summary":null,"term":"GO:0009443"},{"annotations":[107890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"}]},"cv_name":"biological_process","definition":"Any process that generates pyridoxal 5'-phosphate, the active form of vitamin B6, from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxal phosphate biosynthetic process","termid":"GO:0042823"},{"relation_name":"is_a","term_name":"cellular metabolic compound salvage","termid":"GO:0043094"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00252":null,"SJAG_00707":null,"SJAG_01383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"pyridoxal 5'-phosphate salvage","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PLPSAL-PWY"],"synonyms":[{"name":"pyridoxal 5' phosphate salvage","type":"exact"}],"termid":"GO:0009443","terms_by_termid":{"GO:0009443":null,"GO:0010144":null}}


id: PBO:0079181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 10","termid":"PBO:0079181"}


id: GO:0060743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process, independent of morphogenetic (shape) change, that is required for an epithelial cell of the prostate gland to attain its fully functional state. An epithelial cell is a cell usually found in a two-dimensional sheet with a free surface.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell maturation","termid":"GO:0002070"},{"relation_name":"part_of","term_name":"epithelial cell differentiation involved in prostate gland development","termid":"GO:0060742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell maturation involved in prostate gland development","synonyms":[{"name":"prostate gland epithelial cell development","type":"exact"}],"termid":"GO:0060743"}


id: GO:0042572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving retinol, one of the three compounds that makes up vitamin A.","definition_xrefs":["GOC:jl","PMID:1924551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoid metabolic process","termid":"GO:0001523"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"retinol metabolic process","secondary_identifiers":["Wikipedia:Retinol"],"synonyms":[{"name":"retinol metabolism","type":"exact"},{"name":"vitamin A1 alcohol metabolic process","type":"exact"},{"name":"vitamin A1 alcohol metabolism","type":"exact"},{"name":"vitamin A1 metabolic process","type":"exact"},{"name":"vitamin A1 metabolism","type":"exact"}],"termid":"GO:0042572"}


id: PBO:0044868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENND2B antisense RNA 1","termid":"PBO:0044868"}


id: PBO:0017660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-phospholipase A2 activity regulator Pga3 (predicted)","termid":"PBO:0017660"}


id: GO:0001818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of production of a cytokine.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of cytokine production","secondary_identifiers":["GO:0042036","GO:0050710"],"synonyms":[{"name":"down regulation of cytokine biosynthetic process","type":"exact"},{"name":"down regulation of cytokine production","type":"exact"},{"name":"down-regulation of cytokine biosynthetic process","type":"exact"},{"name":"down-regulation of cytokine production","type":"exact"},{"name":"downregulation of cytokine biosynthetic process","type":"exact"},{"name":"downregulation of cytokine production","type":"exact"},{"name":"inhibition of cytokine biosynthetic process","type":"narrow"},{"name":"inhibition of cytokine production","type":"narrow"},{"name":"negative regulation of cytokine anabolism","type":"exact"},{"name":"negative regulation of cytokine biosynthesis","type":"exact"},{"name":"negative regulation of cytokine biosynthetic process","type":"narrow"},{"name":"negative regulation of cytokine formation","type":"exact"},{"name":"negative regulation of cytokine secretion","type":"narrow"},{"name":"negative regulation of cytokine synthesis","type":"exact"}],"termid":"GO:0001818"}


id: PBO:0082255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-tubulin; associates with beta-tubulin (Tub2p) to form tubulin dimer, which polymerizes to form microtubules; expressed at lower level than Tub1p; TUB3 has a paralog, TUB1, that arose from the whole genome duplication","termid":"PBO:0082255"}


id: FYPO:0007103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a short meiotic spindle assembles during meiosis I, and may begin elongation, but does not elongate normally or completely, and eventually collapses. Upon collapse the spindle may break or shrink.","definition_xrefs":["PomBase:mah","PMID:22292001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic spindle collapse","termid":"FYPO:0007083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"spindle collapse during meiosis I","synonyms":[{"name":"broken spindle during meiosis I","type":"related"},{"name":"meiotic spindle collapse during meiosis I","type":"exact"},{"name":"spindle breakage during meiosis I","type":"related"},{"name":"spindle collapse during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007103"}


id: PBO:0059455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb/SANT DNA binding domain containing 5","termid":"PBO:0059455"}


id: PBO:0005328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR94","termid":"PBO:0005328"}


id: PBO:0058448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5087","termid":"PBO:0058448"}


id: FYPO:0000914
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate-ammonia ligase (also known as glutamine synthetase) activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal glutamate-ammonia ligase activity","synonyms":[{"name":"normal GS activity","type":"exact"},{"name":"normal glutamine synthetase activity","type":"exact"},{"name":"normal glutamylhydroxamic synthetase activity","type":"exact"}],"termid":"FYPO:0000914"}


id: PBO:0068158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 465","termid":"PBO:0068158"}


id: GO:0060121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of vestibular hair cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear receptor cell stereocilium organization","termid":"GO:0060122"},{"relation_name":"is_a","term_name":"neuron projection organization","termid":"GO:0106027"},{"relation_name":"part_of","term_name":"vestibular receptor cell morphogenesis","termid":"GO:0060116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibular receptor cell stereocilium organization","synonyms":[{"name":"vestibular hair cell stereocilium organization","type":"exact"},{"name":"vestibular receptor cell stereocilium organisation","type":"exact"},{"name":"vestibular receptor cell stereocilium organization and biogenesis","type":"related"}],"termid":"GO:0060121"}


id: GO:0019927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cross-linking of a cysteine residue to tryptophyl quinone to form 4'-(S-L-cysteinyl)-L-tryptophyl quinone, a cofactor found at the active site of amine dehydrogenase.","definition_xrefs":["PMID:11717396","PDB:1JJU","PMID:11555656","RESID:AA0313"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 4'-(S-L-cysteinyl)-L-tryptophyl quinone (obsolete GO:0019927)","termid":"GO:0019927"}


id: GO:0010447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pH stimulus with pH < 7. pH is a measure of the acidity or basicity of an aqueous solution.","definition_xrefs":["GOC:go_curators","Wikipedia:PH","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to pH","termid":"GO:0009268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to acidic pH","synonyms":[{"name":"response to acidity","type":"broad"}],"termid":"GO:0010447"}


id: GO:0048350
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of paraxial mesoderm cell fate specification.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesodermal cell fate specification","termid":"GO:0048337"},{"relation_name":"is_a","term_name":"regulation of paraxial mesodermal cell fate specification","termid":"GO:0048349"},{"relation_name":"positively_regulates","term_name":"paraxial mesodermal cell fate specification","termid":"GO:0048348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of paraxial mesodermal cell fate specification","synonyms":[{"name":"activation of paraxial mesodermal cell fate specification","type":"narrow"},{"name":"stimulation of paraxial mesodermal cell fate specification","type":"narrow"},{"name":"up regulation of paraxial mesodermal cell fate specification","type":"exact"},{"name":"up-regulation of paraxial mesodermal cell fate specification","type":"exact"},{"name":"upregulation of paraxial mesodermal cell fate specification","type":"exact"}],"termid":"GO:0048350"}


id: GO:0016564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any transcription regulator activity that prevents or downregulates transcription.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription repressor activity (obsolete GO:0016564)","synonyms":[{"name":"negative transcriptional regulator activity","type":"exact"},{"name":"transcription repressor activity","type":"exact"},{"name":"transcriptional repressor activity","type":"exact"}],"termid":"GO:0016564"}


id: PBO:0088020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tyrosyl-DNA phosphodiesterase I; hydrolyzes 3' and 5'-phosphotyrosyl bonds; involved in the repair of DNA lesions created by topo I and topo II; mutations in the human homolog, TDP1, result in the a neurodegenerative disease, spinocerebellar ataxia with axonal neuropathy (SCAN1); yeast cells and human rhabdomyosarcoma lines that overexpress TDP1 both exhibit elevated dosage chromosomal instability (dCIN)","termid":"PBO:0088020"}


id: PBO:0113522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Upstream serine/threonine kinase for the SNF1 complex; plays a role in pseudohyphal growth; partially redundant with Elm1p and Tos3p; members of this family have functional orthology with LKB1, a mammalian kinase associated with Peutz-Jeghers cancer-susceptibility syndrome; SAK1 has a paralog, TOS3, that arose from the whole genome duplication","termid":"PBO:0113522"}


id: PR:P22193
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell cycle checkpoint protein RAD1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02073","PANTHER:PTHR10870:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage checkpoint control protein rad1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.07","secondary_identifiers":["UniProtKB:P22193"],"synonyms":[{"name":"Spom972h-RAD1","type":"exact"}],"termid":"PR:P22193"}


id: FYPO:0009079
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of calcofluor and sodium dodecyl sulfate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0002682"],"is_obsolete":false,"name":"resistance to calcofluor and sodium dodecyl sulfate","synonyms":[{"name":"resistance to calcofluor and SDS","type":"exact"},{"name":"resistance to calcofluor and SDS during vegetative growth","type":"exact"},{"name":"resistance to calcofluor and SDS in combination","type":"exact"},{"name":"resistance to calcofluor and sodium dodecyl sulfate during mitotic cell cycle","type":"related"},{"name":"resistance to calcofluor and sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"resistance to calcofluor and sodium dodecyl sulfate in combination","type":"exact"},{"name":"resistant to calcofluor and SDS","type":"exact"},{"name":"resistant to calcofluor and sodium dodecyl sulfate","type":"exact"}],"termid":"FYPO:0009079"}


id: GO:0004621
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycoprotein phosphatidylinositol + H2O = phosphatidate + glycoprotein inositol.","definition_xrefs":["EC:3.1.4.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase D activity","termid":"GO:0004630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"glycosylphosphatidylinositol phospholipase D activity","secondary_identifiers":["Reactome:R-HSA-8940388","RHEA:10832","MetaCyc:GLYCOPROTEIN-PHOSPHOLIPASE-D-RXN"],"synonyms":[{"name":"GPI-PLD activity","type":"related"},{"name":"glycoprotein phospholipase D activity","type":"exact"},{"name":"glycoprotein-phosphatidylinositol phosphatidohydrolase activity","type":"related"},{"name":"phosphatidylinositol phospholipase D activity","type":"related"},{"name":"phosphatidylinositol-glycan-specific phospholipase D activity","type":"related"},{"name":"phosphatidylinositol-specific phospholipase D activity","type":"related"}],"termid":"GO:0004621"}


id: PBO:0002217
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromeric transcript","termid":"PBO:0002217"}


id: PBO:0050475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox A3","termid":"PBO:0050475"}


id: GO:0042099
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete gamma-delta T cell receptor activity (obsolete GO:0042099)","synonyms":[{"name":"gamma-delta T cell receptor activity","type":"exact"}],"termid":"GO:0042099"}


id: GO:0097318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of colonies in filamentous chains of cells as a result of a abiotic stimulus. An example of this process is found in Candida albicans.","definition_xrefs":["PMID:18679170","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"},{"relation_name":"is_a","term_name":"invasive filamentous growth","termid":"GO:0036267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"invasive growth in response to abiotic stimulus","termid":"GO:0097318"}


id: PBO:0054873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2287","termid":"PBO:0054873"}


id: PBO:0071566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 32","termid":"PBO:0071566"}


id: GO:0050682
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an AF-2 protein domain, a highly conserved ligand-dependent transactivation domain which is essential for receptor-mediated transcriptional activation.","definition_xrefs":["PMID:9682036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"AF-2 domain binding","termid":"GO:0050682"}


id: PBO:0034661
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_localization_to_double-strand_break_site","termid":"PBO:0034661"}


id: PBO:0052560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kynurenine 3-monooxygenase","termid":"PBO:0052560"}


id: SO:0002114
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A protein coding transcript that contains a CDS but has one or more splice junctions >50bp downstream of stop codon, making it susceptible to nonsense mediated decay.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein_coding_primary_transcript","termid":"SO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMD_transcript","secondary_identifiers":["http://www.gencodegenes.org/gencode_biotypes.html"],"synonyms":[{"name":"NMD transcript","type":"exact"},{"name":"nonsense mediated decay transcript","type":"exact"},{"name":"protein_coding_NMD","type":"exact"}],"termid":"SO:0002114"}


id: FYPO:0004955
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of phosphatidylinositol-3-phosphate binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phospholipid binding","termid":"FYPO:0005307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased phosphatidylinositol-3-phosphate binding","synonyms":[{"name":"decreased PtdIns-3-P binding","type":"exact"},{"name":"decreased phosphatidylinositol 3-phosphate binding","type":"exact"},{"name":"reduced phosphatidylinositol-3-phosphate binding","type":"exact"}],"termid":"FYPO:0004955"}


id: GO:0003053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism modulates its heart rate at different values with a regularity of approximately 24 hours.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart rate","termid":"GO:0002027"},{"relation_name":"is_a","term_name":"circadian rhythm","termid":"GO:0007623"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian regulation of heart rate","synonyms":[{"name":"circadian regulation of heart contraction rate","type":"related"}],"termid":"GO:0003053"}


id: GO:0034294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a sexual spore wall, the specialized envelope lying outside the cell membrane of a spore derived from a product of meiosis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"spore wall assembly","termid":"GO:0042244"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"sexual sporulation","termid":"GO:0034293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0071554","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"sexual spore wall assembly","synonyms":[{"name":"sexual spore wall formation","type":"exact"}],"termid":"GO:0034294"}


id: PBO:0071730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 28","termid":"PBO:0071730"}


id: PBO:0061816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 6 Y-linked","termid":"PBO:0061816"}


id: FYPO:0003335
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype that reflects increased occurrence of galactose-specific flocculation. Galactose-specific flocculation is the non-sexual aggregation of single cells, mediated by the binding of cell wall proteins on one cell to galactose residues on the other.","definition_xrefs":["GO:0036349","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased flocculation","termid":"FYPO:0000155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased galactose-specific flocculation","synonyms":[{"name":"flocculating cells, galactose-specific","type":"exact"}],"termid":"FYPO:0003335"}


id: PR:Q9UTM4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A T-complex protein 1 subunit epsilon that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00509","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-complex protein 1 subunit epsilon (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1420.02c","secondary_identifiers":["UniProtKB:Q9UTM4"],"synonyms":[{"name":"CCT-epsilon (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CCT5","type":"exact"},{"name":"TCP-1-epsilon (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTM4"}


id: PBO:0040278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antioxidant 1 copper chaperone","termid":"PBO:0040278"}


id: GO:0098763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"One of the distinct periods or stages into which the mitotic cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitotic cell cycle phase","termid":"GO:0098763"}


id: GO:0002939
data:
  {"annotated_genes":["SJAG_04993","SJAG_00255"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95466,97436],"is_not":false,"summary":null,"term":"GO:0002939"}]},"cv_name":"biological_process","definition":"The process whereby a guanine in tRNA is methylated at position N1 of the guanine.","definition_xrefs":["ISBN:1555811337","ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methylation","termid":"GO:0030488"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00255":null,"SJAG_04993":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"tRNA N1-guanine methylation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tRNA m1-guanine biosynthesis","type":"related"}],"termid":"GO:0002939","terms_by_termid":{"GO:0002939":null}}


id: PBO:0078030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 20","termid":"PBO:0078030"}


id: GO:0004693
data:
  {"annotated_genes":["SJAG_01825","SJAG_03421","SJAG_00150","SJAG_03048","SJAG_03967","SJAG_00342","SJAG_03061"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90399,91870,98461,101740,102092,105091,105092,111412],"is_not":false,"summary":null,"term":"GO:0004693"}]},"cv_name":"molecular_function","definition":"Cyclin-dependent catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate, and ATP + protein threonine = ADP + protein threonine phosphate.","definition_xrefs":["GOC:rn","PMID:9841670","GOC:pr","PMID:7877684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase activity","termid":"GO:0097472"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00342":null,"SJAG_01825":null,"SJAG_03048":null,"SJAG_03061":null,"SJAG_03421":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0004672","GO:0003824","GO:0016301","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"cyclin-dependent protein serine/threonine kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-187959","Reactome:R-HSA-6793661","Reactome:R-HSA-9008412","Reactome:R-HSA-187916","Reactome:R-HSA-180047","Reactome:R-HSA-2294600","Reactome:R-HSA-5195402","Reactome:R-HSA-5244669","Reactome:R-HSA-9009282","Reactome:R-HSA-174251","Reactome:R-HSA-68944","Reactome:R-HSA-3788705","Reactome:R-HSA-6805109","Reactome:R-HSA-2984220","Reactome:R-HSA-69227","Reactome:R-HSA-69005","EC:2.7.11.22","Reactome:R-HSA-174122","Reactome:R-HSA-2990882","Reactome:R-HSA-4086410","Reactome:R-HSA-5692755","GO:0016537","Reactome:R-HSA-69756","Reactome:R-HSA-187520","Reactome:R-HSA-2172183","Reactome:R-HSA-4088024","Reactome:R-HSA-9686521","Reactome:R-HSA-1226095","Reactome:R-HSA-1226094","Reactome:R-HSA-174079","Reactome:R-HSA-2468293","Reactome:R-HSA-380278","Reactome:R-HSA-6797606","Reactome:R-HSA-2245218","Reactome:R-HSA-69754","Reactome:R-HSA-2220971","Reactome:R-HSA-174132","Reactome:R-HSA-2430533","Reactome:R-HSA-187948","Reactome:R-HSA-1912391","Reactome:R-HSA-9624800","Reactome:R-HSA-2514854","Reactome:R-HSA-2468287","Reactome:R-HSA-188390"],"synonyms":[{"name":"ATP:cyclin phosphotransferase activity","type":"related"},{"name":"CDK","type":"related"},{"name":"CDK activity","type":"exact"},{"name":"CDK, catalytic subunit activity","type":"exact"},{"name":"Cdk-activating protein kinase activity","type":"related"},{"name":"D-type cyclin kinase activity","type":"narrow"},{"name":"cdc2 kinase activity","type":"narrow"},{"name":"cdk-activating kinase activity","type":"related"},{"name":"cyclin D-cdk6 kinase activity","type":"narrow"},{"name":"cyclin D-dependent kinase activity","type":"narrow"},{"name":"cyclin E kinase activity","type":"narrow"},{"name":"cyclin-A associated kinase activity","type":"narrow"},{"name":"cyclin-dependent kinase 6 activity","type":"narrow"},{"name":"cyclin-dependent kinase activity","type":"broad"},{"name":"cyclin-dependent kinase-2 activity","type":"narrow"},{"name":"cyclin-dependent kinase-4 activity","type":"narrow"},{"name":"cyclin-dependent protein kinase activity","type":"broad"},{"name":"cyclin-dependent protein kinase, intrinsic catalyst activity","type":"exact"},{"name":"neuronal cdc2-like kinase activity","type":"narrow"}],"termid":"GO:0004693","terms_by_termid":{"GO:0004693":null}}


id: PBO:0056338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP3K20 antisense RNA 1","termid":"PBO:0056338"}


id: PBO:0029789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_Dsc_complex_assembly","termid":"PBO:0029789"}


id: GO:0033727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aldehyde + H2O + acceptor = a carboxylate + reduced acceptor.","definition_xrefs":["EC:1.2.99.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"aldehyde dehydrogenase (FAD-independent) activity","secondary_identifiers":["MetaCyc:1.2.99.7-RXN"],"synonyms":[{"name":"Mop","type":"related"},{"name":"AORDd","type":"related"},{"name":"aldehyde oxidoreductase activity","type":"related"},{"name":"aldehyde:acceptor oxidoreductase (FAD-independent) activity","type":"related"}],"termid":"GO:0033727"}


id: FYPO:0006286
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain a normal (i.e. indistinguishable from wild type) number of protein complexes consisting of cyclin B1 and cyclin-dependent kinase 1 (CDK1).","definition_xrefs":["PomBase:mah","PMID:7796804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell morphology","termid":"FYPO:0000672"},{"relation_name":"is_a","term_name":"normal level of macromolecular complex","termid":"FYPO:0006235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal cyclin B1-CDK1 complex level","synonyms":[{"name":"cyclin B1-CDK1 complexes present at normal level","type":"exact"},{"name":"normal cyclin B1-CDK1 complex level during mitotic cell cycle","type":"related"},{"name":"normal cyclin B1-CDK1 complex level during vegetative growth","type":"exact"}],"termid":"FYPO:0006286"}


id: GO:0004331
data:
  {"annotated_genes":["SJAG_00685","SJAG_05314","SJAG_00039","SJAG_02713"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74927,85037,85759,96006],"is_not":false,"summary":null,"term":"GO:0004331"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-fructose 2,6-bisphosphate + H2O = D-fructose-6-phosphate + phosphate.","definition_xrefs":["EC:3.1.3.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar-phosphatase activity","termid":"GO:0050308"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00039":null,"SJAG_00685":null,"SJAG_02713":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"fructose-2,6-bisphosphate 2-phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.1.3.46-RXN","Reactome:R-HSA-5628905","RHEA:17289","Reactome:R-HSA-70262","GO:0004330"],"synonyms":[{"name":"D-fructose-2,6-bisphosphate 2-phosphohydrolase activity","type":"related"},{"name":"beta-D-fructose-2,6-bisphosphate 2-phosphohydrolase activity","type":"related"},{"name":"fructose-2,6-bisphosphatase activity","type":"related"}],"termid":"GO:0004331","terms_by_termid":{"GO:0004331":null}}


id: PBO:0042564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase inhibitor 1A","termid":"PBO:0042564"}


id: FYPO:0001968
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 1,3-beta-D-glucan synthase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased glucosyltransferase activity","termid":"FYPO:0001089"},{"relation_name":"is_a","term_name":"abnormal 1,3-beta-D-glucan synthase activity","termid":"FYPO:0001967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"increased 1,3-beta-D-glucan synthase activity","termid":"FYPO:0001968"}


id: GO:1904317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:9321918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to ether","termid":"GO:0071362"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"response to 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine","termid":"GO:1904316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine","synonyms":[{"name":"cellular response to PAF","type":"exact"},{"name":"cellular response to platelet-activating factor","type":"exact"}],"termid":"GO:1904317"}


id: GO:0021707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar granule cell. Differentiation includes the processes involved in commitment of a neuroblast to a granule cell fate. A granule cell is a glutamatergic interneuron found in the cerebellar cortex.","definition_xrefs":["PMID:15157725","GOC:cls","GOC:dgh","GO_REF:0000021","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"is_a","term_name":"glutamatergic neuron differentiation","termid":"GO:1905962"},{"relation_name":"part_of","term_name":"cerebellar granular layer formation","termid":"GO:0021684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar granule cell differentiation","termid":"GO:0021707"}


id: GO:0002584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antigen processing and presentation of peptide antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation","termid":"GO:0002578"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002583"},{"relation_name":"negatively_regulates","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of antigen processing and presentation of peptide antigen","synonyms":[{"name":"down regulation of antigen processing and presentation of peptide antigen","type":"exact"},{"name":"down-regulation of antigen processing and presentation of peptide antigen","type":"exact"},{"name":"downregulation of antigen processing and presentation of peptide antigen","type":"exact"},{"name":"inhibition of antigen processing and presentation of peptide antigen","type":"narrow"},{"name":"negative regulation of peptide antigen processing and presentation","type":"exact"}],"termid":"GO:0002584"}


id: GO:0002845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of tolerance induction to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peripheral tolerance induction","termid":"GO:0002660"},{"relation_name":"is_a","term_name":"positive regulation of immune response to tumor cell","termid":"GO:0002839"},{"relation_name":"is_a","term_name":"regulation of tolerance induction to tumor cell","termid":"GO:0002843"},{"relation_name":"positively_regulates","term_name":"tolerance induction to tumor cell","termid":"GO:0002413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tolerance induction to tumor cell","synonyms":[{"name":"activation of tolerance induction to tumor cell","type":"narrow"},{"name":"positive regulation of tolerance induction to tumour cell","type":"exact"},{"name":"stimulation of tolerance induction to tumor cell","type":"narrow"},{"name":"up regulation of tolerance induction to tumor cell","type":"exact"},{"name":"up-regulation of tolerance induction to tumor cell","type":"exact"},{"name":"upregulation of tolerance induction to tumor cell","type":"exact"}],"termid":"GO:0002845"}


id: GO:0008847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage to 3'-phosphomononucleotides and 3'-phosphooligonucleotides with 2',3'-cyclic phosphate intermediates.","definition_xrefs":["EC:4.6.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 3'-phosphomonoesters","termid":"GO:0016892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"Enterobacter ribonuclease activity","secondary_identifiers":["MetaCyc:3.1.27.6-RXN"],"synonyms":[{"name":"Enterobacter RNase activity","type":"exact"}],"termid":"GO:0008847"}


id: FYPO:0002633
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dTTP measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular dTTP level","synonyms":[{"name":"increased cellular dTTP level during mitotic cell cycle","type":"related"},{"name":"increased cellular dTTP level during vegetative growth","type":"exact"},{"name":"increased dTTP accumulation","type":"related"}],"termid":"FYPO:0002633"}


id: PBO:0035952
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4-K5_acetylation_during_vegetative_growth","termid":"PBO:0035952"}


id: PBO:0043559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL5A1 antisense RNA 1","termid":"PBO:0043559"}


id: GO:1904020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of G protein-coupled receptor internalization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24732013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor internalization","termid":"GO:0002090"},{"relation_name":"is_a","term_name":"regulation of G protein-coupled receptor signaling pathway","termid":"GO:0008277"},{"relation_name":"regulates","term_name":"G protein-coupled receptor internalization","termid":"GO:0002031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"regulation of G protein-coupled receptor internalization","synonyms":[{"name":"regulation of G-protein-coupled receptor internalization","type":"exact"}],"termid":"GO:1904020"}


id: PBO:0070569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 35","termid":"PBO:0070569"}


id: GO:0046529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the parts of the wing imaginal discs, giving rise to the adult thorax.","direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc fusion","termid":"GO:0046528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc fusion, thorax closure","termid":"GO:0046529"}


id: PBO:0078875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional repressor GATA binding 1","termid":"PBO:0078875"}


id: PBO:0052977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lacritin","termid":"PBO:0052977"}


id: PBO:0039909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc42 guanine nucleotide exchange factor 9","termid":"PBO:0039909"}


id: GO:0062207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a pattern recognition receptor signaling pathway.","definition_xrefs":["PMID:30610168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"regulates","term_name":"pattern recognition receptor signaling pathway","termid":"GO:0002221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"}


id: GO:0050379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucuronate = UDP-L-iduronate.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"UDP-glucuronate 5'-epimerase activity","secondary_identifiers":["KEGG_REACTION:R01387"],"synonyms":[{"name":"C-5-uronosyl epimerase activity","type":"related"},{"name":"UDP-glucuronate 5' epimerase activity","type":"exact"},{"name":"UDP-glucuronic acid 5'-epimerase activity","type":"related"},{"name":"UDP-glucuronic acid epimerase activity","type":"related"},{"name":"UDPglucuronate 5'-epimerase activity","type":"related"},{"name":"uridine diphosphoglucuronate 5'-epimerase activity","type":"related"}],"termid":"GO:0050379"}


id: GO:0060752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which phytosterols are taken up from the contents of the intestine.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal lipid absorption","termid":"GO:0098856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal phytosterol absorption","termid":"GO:0060752"}


id: GO:0140855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3-serine (position 57) + ATP = histone H3-phosphoserine (position 57) + ADP. This reaction is the addition of a phosphate group to the serine residue at position 57 of histone H3.","definition_xrefs":["PMID:24820035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"},{"relation_name":"is_a","term_name":"histone H3 kinase activity","termid":"GO:0140996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0004672","GO:0140096","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"histone H3S57 kinase activity","synonyms":[{"name":"histone kinase activity (H3-S57 specific)","type":"exact"},{"name":"histone serine kinase activity (H3-S57 specific)","type":"exact"},{"name":"histone-serine kinase activity (H3-S57 specific)","type":"exact"}],"termid":"GO:0140855"}


id: RO:0002595
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a material entity and a process in which causality is involved, with either the material entity or some part of the material entity exerting some influence over the process, or the process influencing some aspect of the material entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"RO:0002410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causal_relation_between_material_entity_and_a_process","termid":"RO:0002595"}


id: PBO:0076048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stathmin 2","termid":"PBO:0076048"}


id: PBO:0059368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S18C","termid":"PBO:0059368"}


id: FYECO:0000353
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which silver nanoparticles were added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PMID:29294138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ AgNP","synonyms":[{"name":"+ silver nanoparticles","type":"exact"}],"termid":"FYECO:0000353"}


id: PATO:0005013
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's lacking parts or having a reduced form compared to fully formed entities.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incomplete structure","termid":"PATO:0005013"}


id: PBO:0054158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1525","termid":"PBO:0054158"}


id: PR:Q9US37
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1039.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C1039.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.04","synonyms":[{"name":"Spom972h-SPAC1039.04","type":"exact"}],"termid":"PR:Q9US37"}


id: PBO:0072656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 8C","termid":"PBO:0072656"}


id: PBO:0016925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Meu32","termid":"PBO:0016925"}


id: FYPO:0003754
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more than one mitotic spindle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0002399","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000120"],"is_obsolete":false,"name":"multiple mitotic spindles","synonyms":[{"name":"additional mitotic spindles present during vegetative growth","type":"exact"},{"name":"extra mitotic spindles during vegetative growth","type":"exact"},{"name":"increased number of mitotic spindles","type":"exact"},{"name":"mitotic spindles present in greater numbers during vegetative growth","type":"exact"},{"name":"multiple spindles during mitosis","type":"exact"},{"name":"multiple spindles during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003754"}


id: PBO:0060308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYL12B pseudogene 3","termid":"PBO:0060308"}


id: PBO:0083073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dimeric hypoxanthine-guanine phosphoribosyltransferase; catalyzes the transfer of the phosphoribosyl portion of 5-phosphoribosyl-alpha-1-pyrophosphate to a purine base (either guanine or hypoxanthine) to form pyrophosphate and a purine nucleotide (either guanosine monophosphate or inosine monophosphate); mutations in the human homolog HPRT1 can cause Lesch-Nyhan syndrome and Kelley-Seegmiller syndrome","termid":"PBO:0083073"}


id: GO:0060852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of a cell to a specific fate and contributes to a cell adopting a venous endothelial cell fate.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in venous endothelial cell fate commitment (obsolete GO:0060852)","termid":"GO:0060852"}


id: GO:0061867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The mitotic spindle organization process by which a mitotic spindle becomes asymmetric either in position or structure.","definition_xrefs":["PMID:26659188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle organization","termid":"GO:0007052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"establishment of mitotic spindle asymmetry","termid":"GO:0061867"}


id: PBO:0088377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit Emc7","termid":"PBO:0088377"}


id: GO:0047304
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2-aminoethyl)phosphonate + pyruvate = L-alanine + phosphonoacetaldehyde.","definition_xrefs":["EC:2.6.1.37","RHEA:17021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016769"],"is_obsolete":false,"name":"2-aminoethylphosphonate-pyruvate transaminase activity","secondary_identifiers":["KEGG_REACTION:R04152","MetaCyc:2.6.1.37-RXN"],"synonyms":[{"name":"(2-aminoethyl)phosphonate aminotransferase activity","type":"related"},{"name":"(2-aminoethyl)phosphonate transaminase activity","type":"related"},{"name":"(2-aminoethyl)phosphonate--pyruvate aminotransferase activity","type":"related"},{"name":"(2-aminoethyl)phosphonate:pyruvate aminotransferase activity","type":"related"},{"name":"(2-aminoethyl)phosphonic acid aminotransferase activity","type":"related"},{"name":"2-aminoethylphosphonate aminotransferase activity","type":"related"},{"name":"2-aminoethylphosphonate--pyruvate aminotransferase activity","type":"related"},{"name":"2-aminoethylphosphonate-pyruvate aminotransferase activity","type":"exact"}],"termid":"GO:0047304"}


id: PBO:0058744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6868","termid":"PBO:0058744"}


id: PBO:0073728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLAM family member 9","termid":"PBO:0073728"}


id: PBO:0077667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 13B","termid":"PBO:0077667"}


id: PBO:0075569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scaffold protein involved in DNA repair","termid":"PBO:0075569"}


id: GO:0002376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the development or functioning of the immune system, an organismal system for calibrated responses to potential internal or invasive threats.","definition_xrefs":["GO_REF:0000022","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune system process","secondary_identifiers":["Wikipedia:Immune_system"],"termid":"GO:0002376"}


id: GO:0022843
data:
  {"annotated_genes":["SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008331"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a cation by a voltage-gated channel. A cation is a positively charged ion. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated monoatomic ion channel activity","termid":"GO:0005244"},{"relation_name":"is_a","term_name":"monoatomic cation channel activity","termid":"GO:0005261"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"voltage-gated monoatomic cation channel activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6788999","Reactome:R-HSA-2534378"],"synonyms":[{"name":"voltage-gated cation channel activity","type":"broad"}],"termid":"GO:0022843","terms_by_termid":{"GO:0008331":null}}


id: GO:0033780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: taurochenodeoxycholate + O2 + reduced [NADPH--hemoprotein reductase] +  = taurohyocholate H+ + H2O + oxidized [NADPH--hemoprotein reductase]. Acts on taurochenodeoxycholate, taurodeoxycholate and less readily on lithocholate and chenodeoxycholate.","definition_xrefs":["EC:1.14.14.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"taurochenodeoxycholate 6alpha-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-7977"],"synonyms":[{"name":"CYP3A4","type":"related"},{"name":"CYP4A21","type":"related"},{"name":"taurochenodeoxycholate 6alpha-monooxygenase activity","type":"related"},{"name":"taurochenodeoxycholate,NADPH:oxygen oxidoreductase (6alpha-hydroxylating) activity","type":"related"}],"termid":"GO:0033780"}


id: PR:O13971
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleolar MIF4G domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01279","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of glycerol defect protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.11","secondary_identifiers":["UniProtKB:O13971"],"synonyms":[{"name":"Spom972h-NOM1","type":"exact"}],"termid":"PR:O13971"}


id: FYPO:0002012
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein encoded by genes normally repressed during iron ion starvation measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of iron ion starvation-repressed proteins","synonyms":[{"name":"decreased level of iron ion depletion-repressed proteins","type":"exact"},{"name":"decreased level of iron ion deprivation-repressed proteins","type":"exact"},{"name":"decreased level of iron ion starvation-repressed proteins during mitotic cell cycle","type":"related"},{"name":"decreased level of iron ion starvation-repressed proteins during vegetative growth","type":"exact"},{"name":"decreased level of proteins repressed by iron ion starvation","type":"exact"},{"name":"decreased level of proteins repressed during iron ion starvation","type":"exact"},{"name":"decreased protein level of genes (normally) repressed during iron starvation","type":"exact"},{"name":"reduced level of iron ion starvation-repressed proteins","type":"exact"}],"termid":"FYPO:0002012"}


id: PR:Q8NKC0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB21E7.09 gene.","definition_xrefs":["UniProtKB:Q8NKC0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-asparaginase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.09","synonyms":[{"name":"L-asparagine amidohydrolase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBPB21E7.09","type":"exact"}],"termid":"PR:Q8NKC0"}


id: GO:1904040
data:
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id: PBO:0055552
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id: GO:1900654
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id: PBO:0046162
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id: PBO:0080888
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id: PBO:0003938
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id: GO:0031982
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id: RO:0002357
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id: PBO:0058275
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id: GO:0031801
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id: PR:Q9USM7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tim23 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USM7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.09c","synonyms":[{"name":"Spom972h-tim23","type":"exact"}],"termid":"PR:Q9USM7"}


id: GO:1902701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of pentose to propan-2-ol.","definition_xrefs":["GO_REF:0000093","GOC:TermGenie","GOC:mengo_curators","PMID:18727018","PMID:19539744"],"gene_count":0,"genotype_count":0,"name":"obsolete pentose catabolic process to propan-2-ol (obsolete GO:1902701)","synonyms":[{"name":"pentose breakdown to propan-2-ol","type":"exact"},{"name":"pentose catabolic process to isopropanol","type":"exact"},{"name":"pentose catabolic process to isopropyl alcohol","type":"exact"},{"name":"pentose catabolism to propan-2-ol","type":"exact"},{"name":"pentose degradation to propan-2-ol","type":"exact"},{"name":"solventogenesis","type":"broad"}],"termid":"GO:1902701"}


id: GO:0052007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism in its host resulting in the formation of substances. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete biosynthesis by symbiont of substance in host (obsolete GO:0052007)","synonyms":[{"name":"biosynthesis by organism of substance in host","type":"exact"}],"termid":"GO:0052007"}


id: FYPO:0002865
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to polypeptone. Cells stop growing (and may die) at a concentration of polypeptone that allows wild type cells to grow. Polypeptone is a mixture of peptones made up of equal parts of pancreatic digest of casein and peptic digest of animal used in media.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to polypeptone","synonyms":[{"name":"hypersensitive to polypeptone","type":"exact"},{"name":"sensitive to polypeptone during mitotic cell cycle","type":"related"},{"name":"sensitive to polypeptone during vegetative growth","type":"exact"}],"termid":"FYPO:0002865"}


id: GO:1990825
data:
  {"annotated_genes":["SJAG_00338"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87148],"is_not":false,"summary":null,"term":"GO:1990825"}]},"cv_name":"molecular_function","definition":"Binding to messenger RNA (mRNA) of a specific nucleotide composition or a specific sequence motif.","definition_xrefs":["PMID:11886857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA binding","termid":"GO:0003729"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00338":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"sequence-specific mRNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990825","terms_by_termid":{"GO:1990825":null}}


id: PBO:0013465
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"similarity to YCL030C is at the C-term, S. pombe his7 is similar to YCl030C at the N-term","termid":"PBO:0013465"}


id: PBO:0003394
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human INT6","termid":"PBO:0003394"}


id: PR:O74444
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug122 gene.","definition_xrefs":["UniProtKB:O74444","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 122 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.15","synonyms":[{"name":"Spom972h-mug122","type":"exact"}],"termid":"PR:O74444"}


id: PBO:0046984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member H, pseudogene","termid":"PBO:0046984"}


id: GO:0106301
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an NADPH- and oxygen-dependent reaction that converts arachidonic acid to cis-5,6-epoxyeicosatrienoic acid.","definition_xrefs":["PMID:10491410","PMID:8631948","RHEA:49936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arachidonate epoxygenase activity","termid":"GO:0008392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"arachidonate 5,6-epoxygenase activity","synonyms":[{"name":"arachidonic acid 5,6-epoxygenase activity","type":"exact"}],"termid":"GO:0106301"}


id: PBO:0111793
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bZIP (basic leucine zipper) transcription factor family","termid":"PBO:0111793"}


id: PBO:0083797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein required for maturation of Gas1p and Pho8p; involved in protein trafficking; GFP-fusion protein localizes to the ER and YFP-fusion protein to the nuclear envelope-ER network; null mutants have a cell separation defect","termid":"PBO:0083797"}


id: PBO:0072791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spalt like transcription factor 1 pseudogene 1","termid":"PBO:0072791"}


id: MOD:01455
data:
  {"annotated_genes":["SJAG_02763","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[115545,115546,115505,115507,115508,115506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl or carboxyl hydrogen with a phosphono group (H2PO3 or 'phosphate').","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylated residue","termid":"MOD:00696"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"O-phosphorylated residue","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null},"synonyms":[{"name":"OPhosRes","type":"exact"}],"termid":"MOD:01455","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00046":null}}


id: PBO:0081384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 224","termid":"PBO:0081384"}


id: GO:0044341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of phosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore, by a mechanism dependent upon sodium ions.","definition_xrefs":["GOC:jl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate ion transport","termid":"GO:0006817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"sodium-dependent phosphate transport","termid":"GO:0044341"}


id: PBO:0040127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 13","termid":"PBO:0040127"}


id: PBO:0073120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine dehydratase like","termid":"PBO:0073120"}


id: PBO:0090632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiolipin synthase/ hydrolase fusion protein Crd1","termid":"PBO:0090632"}


id: PBO:0088458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guard protein for 5'-capping of pre-mRNAs Srp2/Npl3","termid":"PBO:0088458"}


id: PBO:0071016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 18","termid":"PBO:0071016"}


id: PBO:0090212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial lipoic acid synthetase Lip5","termid":"PBO:0090212"}


id: PR:O59778
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A biotin synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04215","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biotin synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.02","secondary_identifiers":["UniProtKB:O59778"],"synonyms":[{"name":"Spom972h-bioB","type":"exact"}],"termid":"PR:O59778"}


id: PBO:0055007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2422","termid":"PBO:0055007"}


id: PBO:0064478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POLG alternative reading frame","termid":"PBO:0064478"}


id: PR:000027561
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A-alpha unphosphorylated form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:21516229","PomBase:MAH","PMID:15226425","PMID:19965387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A-alpha (Schizosaccharomyces pombe 972h-)","termid":"PR:P04909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A-alpha unphosphorylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC622.08c","synonyms":[{"name":"Spom-hta1/UnMod","type":"exact"}],"termid":"PR:000027561"}


id: PR:O94671
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC776.03 gene.","definition_xrefs":["UniProtKB:O94671","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.03","synonyms":[{"name":"HDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC776.03","type":"exact"}],"termid":"PR:O94671"}


id: PBO:0027483
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_cadmium-induced_proteins_during_G0","termid":"PBO:0027483"}


id: PBO:0065646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN23 divergent transcript","termid":"PBO:0065646"}


id: PBO:0029463
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_elongated_mononucleate_vegetative_cell_with_normally_localized_septum","termid":"PBO:0029463"}


id: GO:1902299
data:
  {"annotated_genes":["SJAG_02074","SJAG_00247","SJAG_02607"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99385,111089,106618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902985"}]},"cv_name":"biological_process","definition":"Any pre-replicative complex assembly that is involved in cell cycle DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"pre-replicative complex assembly","termid":"GO:0036388"},{"relation_name":"part_of","term_name":"cell cycle DNA replication","termid":"GO:0044786"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_02074":null,"SJAG_02607":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260","GO:0007049","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"pre-replicative complex assembly involved in cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pre-RC assembly involved in cell cycle DNA replication","type":"exact"},{"name":"pre-replication complex assembly involved in cell cycle DNA replication","type":"related"}],"termid":"GO:1902299","terms_by_termid":{"GO:1902985":null}}


id: PBO:0058177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4472-1","termid":"PBO:0058177"}


id: GO:0005914
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A small cell-cell adherens junction assembled during the cellularization stage of insect embyrogenesis; spot adherens junctions later fuse to form the zonula adherens.","definition_xrefs":["PMID:11700298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adherens junction","termid":"GO:0005912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spot adherens junction","synonyms":[{"name":"dense plaque","type":"broad"},{"name":"punctum adherens","type":"exact"}],"termid":"GO:0005914"}


id: SO:0002212
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A self replicating linear nucleic acid molecule that is distinct from a chromosome in the organism. They are capped by terminal proteins covalently bound to the 5' ends of the DNA.","definition_xrefs":["PMID:21719542","SBOL:jb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasmid","termid":"SO:0000155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear_plasmid","synonyms":[{"name":"linear plasmid","type":"exact"}],"termid":"SO:0002212"}


id: FYPO:0006972
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of S-adenosyl-L-cysteine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular S-adenosyl-L-cysteine level","synonyms":[{"name":"decreased cellular S-adenosyl-L-cysteine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular S-adenosyl-L-cysteine level during vegetative growth","type":"exact"},{"name":"decreased level of S-adenosyl-L-cysteine in cell","type":"exact"},{"name":"reduced cellular S-adenosyl-L-cysteine level","type":"exact"}],"termid":"FYPO:0006972"}


id: GO:0021768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the nucleus accumbens over time from its initial formation until its mature state. The nucleus accumbens is a collection of pleomorphic cells in the caudal part of the anterior horn of the lateral ventricle, in the region of the olfactory tubercle, lying between the head of the caudate nucleus and the anterior perforated substance. It is part of the ventral striatum, a composite structure considered part of the basal ganglia.","definition_xrefs":["GOC:dgh","GOC:jid","GOC:cls","ISBN:0878937420","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"striatum development","termid":"GO:0021756"},{"relation_name":"part_of","term_name":"limbic system development","termid":"GO:0021761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nucleus accumbens development","synonyms":[{"name":"accumbens nucleus development","type":"exact"},{"name":"ventral striatum development","type":"broad"}],"termid":"GO:0021768"}


id: PBO:0057901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3202-2","termid":"PBO:0057901"}


id: FYPO:0001860
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which minichromosomes are lost at a higher frequency than normal during the meiotic cell cycle. Minichromosome loss occurs when one or both daughter cells do not inherit copies of a minichromosome from the mother cell, and may result from failure of minichromosome replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased minichromosome loss","termid":"FYPO:0001859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased minichromosome loss during meiotic cell cycle","synonyms":[{"name":"increased minichromosome loss during meiosis","type":"related"},{"name":"meiotic minichromosome maintenance defect","type":"related"}],"termid":"FYPO:0001860"}


id: PBO:0075884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6 beta-galactoside alpha-2,6-sialyltransferase 2","termid":"PBO:0075884"}


id: PBO:0027419
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_Golgi_apparatus,_with_protein_mislocalized_to_endoplasmic_reticulum","termid":"PBO:0027419"}


id: PBO:0005685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol binding protein (predicted)","termid":"PBO:0005685"}


id: PBO:0053930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1229","termid":"PBO:0053930"}


id: FYPO:0008080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a heptakisphosphate 5-kinase is decreased.","definition_xrefs":["PMID:36468882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"decreased inositol heptakisphosphate 5-kinase activity","termid":"FYPO:0008080"}


id: GO:1900122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a protein or other molecule binding to a receptor.","definition_xrefs":["GOC:TermGenie","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein binding","termid":"GO:0032092"},{"relation_name":"is_a","term_name":"regulation of receptor binding","termid":"GO:1900120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of receptor binding","synonyms":[{"name":"activation of receptor binding","type":"narrow"},{"name":"up regulation of receptor binding","type":"exact"},{"name":"upregulation of receptor binding","type":"exact"}],"termid":"GO:1900122"}


id: GO:1905085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of bioluminescence.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:rph","PMID:10913092","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"regulates","term_name":"bioluminescence","termid":"GO:0008218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of bioluminescence","termid":"GO:1905085"}


id: GO:0010929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of auxin mediated signaling pathway. Auxin mediated signaling pathway is the series of molecular signals generated in response to detection of auxin.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of auxin mediated signaling pathway","termid":"GO:0010928"},{"relation_name":"positively_regulates","term_name":"auxin-activated signaling pathway","termid":"GO:0009734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of auxin mediated signaling pathway","synonyms":[{"name":"positive regulation of auxin mediated signalling pathway","type":"exact"}],"termid":"GO:0010929"}


id: PBO:0026802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_meiotic_recombination_double-strand_break_repair","termid":"PBO:0026802"}


id: PBO:0069396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 656, pseudogene","termid":"PBO:0069396"}


id: PBO:0075423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated antigen 9","termid":"PBO:0075423"}


id: PBO:0061154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide nucleotide adenylyltransferase 2","termid":"PBO:0061154"}


id: MOD:02075
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-tyrosine residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal or metal cluster coordinated L-tyrosine residue","termid":"MOD:02075"}


id: GO:0001988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of heart contraction as a result of the baroreceptor response to decreased blood pressure.","definition_xrefs":["ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heart rate","termid":"GO:0010460"},{"relation_name":"part_of","term_name":"baroreceptor response to decreased systemic arterial blood pressure","termid":"GO:0001982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heart rate involved in baroreceptor response to decreased systemic arterial blood pressure","synonyms":[{"name":"activation of heart contraction rate in baroreceptor response to decreased blood pressure","type":"narrow"},{"name":"positive control of heart contraction rate in baroreceptor response to decreased blood pressure","type":"exact"},{"name":"positive regulation of cardiac contraction rate in baroreceptor response to decreased blood pressure","type":"exact"},{"name":"positive regulation of heart contraction rate in baroreceptor response to decreased blood pressure","type":"related"},{"name":"stimulation of heart contraction rate in baroreceptor response to decreased blood pressure","type":"narrow"},{"name":"up regulation of heart contraction rate in baroreceptor response to decreased blood pressure","type":"exact"},{"name":"up-regulation of heart contraction rate in baroreceptor response to decreased blood pressure","type":"exact"},{"name":"upregulation of heart contraction rate in baroreceptor response to decreased blood pressure","type":"exact"}],"termid":"GO:0001988"}


id: PBO:0082943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic GTPase/eEF2-like factor involved in ribosomal biogenesis; with Sdo1p, a guanine nucleotide exchange factor (GEF), promotes release of Tif6p from 60S ribosomal subunits in the cytoplasm so that they can assemble with 40S subunits to generate mature ribosomes; required for quality control check of newly made large ribosomal subunits before they are released into the pool of translating ribosomes","termid":"PBO:0082943"}


id: MOD:02040
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-alanine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-alanine residue","synonyms":[{"name":"XlnkAla","type":"exact"}],"termid":"MOD:02040"}


id: PBO:0043211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC28 protein kinase regulatory subunit 1B pseudogene 4","termid":"PBO:0043211"}


id: CHEBI:26948
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine","termid":"CHEBI:26948"}


id: GO:0046035
data:
  {"annotated_genes":["SJAG_03708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving CMP, cytidine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate metabolic process","termid":"GO:0009173"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03708":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"CMP metabolic process","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"CMP metabolism","type":"exact"}],"termid":"GO:0046035","terms_by_termid":{"GO:0009224":null}}


id: PBO:0067603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 767, pseudogene","termid":"PBO:0067603"}


id: PBO:0059989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 9","termid":"PBO:0059989"}


id: GO:0014811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of skeletal muscle contraction via the regulation of the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol. The sarcoplasmic reticulum is the endoplasmic reticulum of striated muscle, specialised for the sequestration of calcium ions that are released upon receipt of a signal relayed by the T tubules from the neuromuscular junction.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion","termid":"GO:0014809"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle contraction","termid":"GO:0045988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion","termid":"GO:0014811"}


id: GO:0004103
data:
  {"annotated_genes":["SJAG_01918"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84871],"is_not":false,"summary":null,"term":"GO:0004103"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + choline = ADP + choline phosphate + 2 H+.","definition_xrefs":["RHEA:12837","EC:2.7.1.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01918":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"choline kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1483004","KEGG_REACTION:R01021","MetaCyc:CHOLINE-KINASE-RXN"],"synonyms":[{"name":"ATP:choline phosphotransferase activity","type":"related"},{"name":"choline kinase (phosphorylating)","type":"related"},{"name":"choline phosphokinase activity","type":"related"},{"name":"choline-ethanolamine kinase activity","type":"related"}],"termid":"GO:0004103","terms_by_termid":{"GO:0004103":null}}


id: PBO:0043047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHORDC1 pseudogene 4","termid":"PBO:0043047"}


id: PBO:0045885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 epsilon 1","termid":"PBO:0045885"}


id: GO:0043165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of an outer membrane of the type formed in Gram-negative bacteria. This membrane is enriched in polysaccharide and protein, and the outer leaflet of the membrane contains specific lipopolysaccharide structures.","definition_xrefs":["ISBN:0135712254","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane assembly","termid":"GO:0071709"},{"relation_name":"part_of","term_name":"cell envelope organization","termid":"GO:0043163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0061024"],"is_obsolete":false,"name":"Gram-negative-bacterium-type cell outer membrane assembly","synonyms":[{"name":"cell outer membrane biogenesis","type":"related"}],"termid":"GO:0043165"}


id: PBO:0063298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily C, 5","termid":"PBO:0063298"}


id: GO:0110070
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plasma membrane invagination at the site of separation of a multi-nucleate cell or syncytium into individual cells.","definition_xrefs":["GOC:ha","PMID:27226317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane region","termid":"GO:0098590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"cellularization cleavage furrow","termid":"GO:0110070"}


id: GO:0070355
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptotagmin, synaptobrevin 2 (VAMP2), SNAP-25, syntaxin 1a, syntaxin1b, Rab3a, and complexin II (or orthologs thereof).","definition_xrefs":["PMID:7654227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"synaptotagmin-synaptobrevin 2-SNAP-25-syntaxin-1a-syntaxin-1b-Rab3a-complexin II complex","synonyms":[{"name":"SNARE complex (STX1a, STX1b, SNAP25, RAB3a, SYT1, VAMP2, CPLX2)","type":"narrow"},{"name":"STX1a-STX1b-SNAP25-RAB3a-SYT1-VAMP2-CPLX2 complex","type":"narrow"}],"termid":"GO:0070355"}


id: FYPO:0004342
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any RNA transcribed from long terminal repeat elements (LTRs) measured in a cell is higher than normal.","definition_xrefs":["PMID:24095277","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased repeat element RNA level","termid":"FYPO:0003558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased LTR-derived RNA level","synonyms":[{"name":"increased LTR-derived RNA accumulation","type":"related"},{"name":"increased LTR-derived RNA level during mitotic cell cycle","type":"related"},{"name":"increased LTR-derived RNA level during vegetative growth","type":"exact"},{"name":"increased LTR-derived transcript level","type":"exact"},{"name":"increased accumulation of LTR-derived RNAs","type":"related"},{"name":"increased long terminal repeat-derived RNA level","type":"exact"}],"termid":"FYPO:0004342"}


id: PBO:0043544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type I alpha 1 chain","termid":"PBO:0043544"}


id: MOD:00663
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to a methylated lysine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated lysine","synonyms":[{"name":"MeLys","type":"exact"}],"termid":"MOD:00663"}


id: GO:0047462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phenylalanine + ATP + H2O = D-phenylalanine + AMP + diphosphate + 2 H+.","definition_xrefs":["EC:5.1.1.11","RHEA:20201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phenylalanine racemase (ATP-hydrolyzing) activity","secondary_identifiers":["MetaCyc:5.1.1.11-RXN","KEGG_REACTION:R00686"],"synonyms":[{"name":"gramicidin S synthetase I","type":"related"},{"name":"phenylalanine racemase (ATP-hydrolysing)","type":"broad"},{"name":"phenylalanine racemase (adenosine triphosphate-hydrolysing)","type":"related"},{"name":"phenylalanine racemase activity","type":"related"}],"termid":"GO:0047462"}


id: GO:0070871
data:
  {"annotated_genes":["SJAG_02718","SJAG_03646","SJAG_01171","SJAG_03444","SJAG_01888","SJAG_05001","SJAG_00667","SJAG_01017"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104124,98005,85158,107378,96207,84348,98006,90081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904541"}]},"cv_name":"biological_process","definition":"A process of cell wall organization that contributes to conjugation with cellular fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall organization","termid":"GO:0071555"},{"relation_name":"part_of","term_name":"conjugation with cellular fusion","termid":"GO:0000747"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01888":null,"SJAG_02718":null,"SJAG_03444":null,"SJAG_03646":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0000747","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall organization involved in conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell wall organisation involved in conjugation with cellular fusion","type":"exact"}],"termid":"GO:0070871","terms_by_termid":{"GO:1904541":null}}


id: GO:0004464
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: leukotriene C(4) = glutathione + leukotriene A(4).","definition_xrefs":["EC:4.4.1.20","RHEA:17617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"leukotriene-C4 synthase activity","secondary_identifiers":["Reactome:R-HSA-266050","KEGG_REACTION:R03059","MetaCyc:LEUKOTRIENE-C4-SYNTHASE-RXN"],"synonyms":[{"name":"(7E,9E,11Z,14Z)-(5S,6R)-5,6-epoxyicosa-7,9,11,14-tetraenoate:glutathione leukotriene-transferase (epoxide-ring-opening)","type":"related"},{"name":"(7E,9E,11Z,14Z)-(5S,6R)-6-(glutathion-S-yl)-5-hydroxyicosa-7,9,11,14-tetraenoate glutathione-lyase (epoxide-forming)","type":"related"},{"name":"LTC(4) synthase activity","type":"related"},{"name":"LTC(4) synthetase activity","type":"related"},{"name":"LTC4 synthase activity","type":"related"},{"name":"LTC4 synthetase activity","type":"related"},{"name":"leukotriene A(4):glutathione S-leukotrienyltransferase activity","type":"related"},{"name":"leukotriene A4:glutathione S-leukotrienyltransferase activity","type":"related"},{"name":"leukotriene C(4) synthetase activity","type":"related"},{"name":"leukotriene C4 synthetase activity","type":"related"},{"name":"leukotriene-C4 glutathione-lyase (leukotriene-A4-forming)","type":"related"}],"termid":"GO:0004464"}


id: GO:0048481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ovule over time, from its formation to the mature structure. The ovule is the structure in seed plants enclosing the female gametophyte, and is composed of the nucellus, one or two integuments, and the funiculus; it develops into the seed.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"plant organ development","termid":"GO:0099402"},{"relation_name":"part_of","term_name":"plant-type ovary development","termid":"GO:0035670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plant ovule development","termid":"GO:0048481"}


id: GO:0071036
data:
  {"annotated_genes":["SJAG_03745","SJAG_03984"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88294,109333],"is_not":false,"summary":null,"term":"GO:0071036"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the nucleus and resulting in the breakdown of a small nucleolar RNA (snoRNA) molecule, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target snoRNA.","definition_xrefs":["GOC:dgf","GOC:krc","PMID:15935758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA catabolic process","termid":"GO:0016077"},{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03745":null,"SJAG_03984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016074"}],"interesting_parent_ids":["GO:0016074","GO:0008150"],"is_obsolete":false,"name":"nuclear polyadenylation-dependent snoRNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear poly(A)-dependent snoRNA catabolic process","type":"related"}],"termid":"GO:0071036","terms_by_termid":{"GO:0071036":null}}


id: PBO:0011505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anthranilate synthase component II, multifunctional enzyme (predicted)","termid":"PBO:0011505"}


id: PBO:0085485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Processing alpha glucosidase I; ER type II integral membrane N-glycoprotein involved in assembly of cell wall beta 1,6 glucan and asparagine-linked protein glycosylation; also involved in ER protein quality control and sensing of ER stress","termid":"PBO:0085485"}


id: GO:0045335
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded intracellular vesicle that arises from the ingestion of particulate material by phagocytosis.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytic vesicle","termid":"GO:0030139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"phagocytic vesicle","secondary_identifiers":["Wikipedia:Phagosome"],"synonyms":[{"name":"phagosome","type":"exact"}],"termid":"GO:0045335"}


id: GO:0047013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholate + NADP+ = 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanate + H+ + NADPH.","definition_xrefs":["RHEA:14129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cholate 12-alpha dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.176-RXN","EC:1.1.1.176","KEGG_REACTION:R02793"],"synonyms":[{"name":"12-alpha-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"12alpha-hydroxy steroid dehydrogenase activity","type":"broad"},{"name":"12alpha-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"12alpha-hydroxysteroid:NADP+ 12-oxidoreductase activity","type":"broad"},{"name":"NAD-dependent 12alpha-hydroxysteroid dehydrogenase activity","type":"broad"},{"name":"NADP-12alpha-hydroxysteroid dehydrogenase activity","type":"broad"}],"termid":"GO:0047013"}


id: PBO:0059353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S16 pseudogene 1","termid":"PBO:0059353"}


id: GO:0070063
data:
  {"annotated_genes":["SJAG_00139","SJAG_04353","SJAG_00809","SJAG_01744","SJAG_03118","SJAG_01151","SJAG_02203","SJAG_01610","SJAG_04933","SJAG_00483","SJAG_00448","SJAG_02691","SJAG_02898","SJAG_01707"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76636],"is_not":false,"summary":null,"term":"GO:0070063"},{"annotations":[66499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043175"},{"annotations":[70531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001042"},{"annotations":[64414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099122"},{"annotations":[76902,71446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"},{"annotations":[70131,75076,77467,77486,71390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000993"},{"annotations":[75353,77151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001139"},{"annotations":[72585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000994"}]},"cv_name":"molecular_function","definition":"Binding to an RNA polymerase molecule or complex.","definition_xrefs":["GOC:txnOH","GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00139":null,"SJAG_00448":null,"SJAG_00483":null,"SJAG_00809":null,"SJAG_01151":null,"SJAG_01610":null,"SJAG_01707":null,"SJAG_01744":null,"SJAG_02203":null,"SJAG_02691":null,"SJAG_02898":null,"SJAG_03118":null,"SJAG_04353":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0070063","terms_by_termid":{"GO:0000993":null,"GO:0000994":null,"GO:0001042":null,"GO:0001139":null,"GO:0043175":null,"GO:0070063":null,"GO:0099122":null,"GO:1990269":null}}


id: GO:0097099
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of albumen (also called egg white). Albumen is the clear liquid contained within an egg and consists of water and proteins, among which are ovomucin and ovomucoid. It protects the egg yolk and provides additional nutrition for the growth of the embryo.","definition_xrefs":["GOC:jj","Wikipedia:Albumen"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of albumen","synonyms":[{"name":"structural constituent of egg white","type":"exact"}],"termid":"GO:0097099"}


id: PBO:0070381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho associated coiled-coil containing protein kinase 2","termid":"PBO:0070381"}


id: PBO:0027260
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-S10_phosphorylation","termid":"PBO:0027260"}


id: GO:0099110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of a protein to the cortex of the cell tip, driven by polymerization of a microtubule to which the protein is attached.","definition_xrefs":["GOC:vw","PMID:11018050","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule polymerization based protein transport","termid":"GO:0099112"},{"relation_name":"is_a","term_name":"protein localization to cell cortex of cell tip","termid":"GO:1990896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"microtubule polymerization based protein transport to cell tip cortex","termid":"GO:0099110"}


id: PBO:0047975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 1 family member B, pseudogene","termid":"PBO:0047975"}


id: FYPO:0000866
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"abnormal histone H3-K9 dimethylation during vegetative growth","synonyms":[{"name":"abnormal histone H3 K9 dimethylation during vegetative growth","type":"exact"},{"name":"abnormal histone H3-K9 dimethylation during mitotic cell cycle","type":"related"},{"name":"abnormal histone H3K9 dimethylation during vegetative growth","type":"exact"},{"name":"abnormal histone H3K9me2 during vegetative growth","type":"exact"},{"name":"abnormal histone lysine H3 K9 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000866"}


id: PBO:0080067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 32 pseudogene 4","termid":"PBO:0080067"}


id: GO:2000300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic vesicle exocytosis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter secretion","termid":"GO:0046928"},{"relation_name":"is_a","term_name":"regulation of regulated secretory pathway","termid":"GO:1903305"},{"relation_name":"regulates","term_name":"synaptic vesicle exocytosis","termid":"GO:0016079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192","GO:0023052"],"is_obsolete":false,"name":"regulation of synaptic vesicle exocytosis","termid":"GO:2000300"}


id: GO:0140650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The radial migration of a pyramidal neuron along radial glial cells.","definition_xrefs":["PMID:3760547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron migration","termid":"GO:0001764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"radial glia-guided pyramidal neuron migration","synonyms":[{"name":"radial glia-dependent neuronal migration","type":"exact"}],"termid":"GO:0140650"}


id: PBO:0015691
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homologue of Parp Zinc finger","termid":"PBO:0015691"}


id: PBO:0034269
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_progenesis_relationship_with","termid":"PBO:0034269"}


id: PBO:0009641
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.-.-","termid":"PBO:0009641"}


id: PBO:0086437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative integral membrane protein with a role in calcium uptake; non-essential protein; mutant has cell wall defects and Ca+ uptake deficiencies; transcription is induced under conditions of zinc deficiency","termid":"PBO:0086437"}


id: PBO:0049903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hes family bHLH transcription factor 4","termid":"PBO:0049903"}


id: PBO:0056327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 9","termid":"PBO:0056327"}


id: GO:0103117
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-3-O-[(3R)-3-hydroxytetradecanoyl]-N-acetylglucosamine(2-) + H2O = UDP-3-O-[(3R)-3-hydroxytetradecanoyl]-alpha-D-glucosamine(1-) + acetate.","definition_xrefs":["GOC:pz","EC:3.5.1.108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"UDP-3-O-acyl-N-acetylglucosamine deacetylase activity","secondary_identifiers":["MetaCyc:UDPACYLGLCNACDEACETYL-RXN","RHEA:25209"],"termid":"GO:0103117"}


id: PBO:0083000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic seryl-tRNA synthetase; class II aminoacyl-tRNA synthetase that aminoacylates tRNA(Ser), displays tRNA-dependent amino acid recognition which enhances discrimination of the serine substrate, interacts with peroxin Pex21p","termid":"PBO:0083000"}


id: PBO:0085964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overexpression suppresses the high-frequency loss of mini-chromosomes, probably by increasing the rate of proper chromosome segregation; translated gene product of YCR041W, but not its transcript, is responsible for suppression; suppression ability of YCR041W is completely dependent on silencing protein Sir4p","termid":"PBO:0085964"}


id: PBO:0034436
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_mitotic_cell_cycle_arrest_in_interphase_during_cellular_response_to_UV","termid":"PBO:0034436"}


id: GO:0005702
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region of the polytene chromosome where the diameter is considerably decreased, probably resulting from local differences in chromosome organization.","definition_xrefs":["GOC:bf","ISBN:0120649012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"polytene chromosome","termid":"GO:0005700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"polytene chromosome weak point","synonyms":[{"name":"constriction","type":"broad"}],"termid":"GO:0005702"}


id: GO:0015927
data:
  {"annotated_genes":["SJAG_04859"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004555"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of trehalose or a trehalose derivative.","definition_xrefs":["PMID:31925485","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"trehalase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015927","terms_by_termid":{"GO:0004555":null}}


id: PBO:0067489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 623, pseudogene","termid":"PBO:0067489"}


id: PBO:0052215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily S member 2","termid":"PBO:0052215"}


id: PBO:0018201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-X homolog, FANCM-MHF complex subunit Mhf2","termid":"PBO:0018201"}


id: MOD:01436
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to cyclo[(prolylserin)-O-yl] cysteinate.","definition_xrefs":["PubMed:7961166","RESID:AA0489#CYS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclo[(prolylserin)-O-yl] cysteinate","termid":"MOD:01629"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclo[(prolylserin)-O-yl] cysteinate (Cys)","synonyms":[{"name":"(3,6-dioxopyrrolo[4,5-a]piperazin-2-yl)methyl cysteinate","type":"exact"},{"name":"MOD_RES Cyclo[(prolylserin)-O-yl] cysteinate","type":"exact"},{"name":"[(3S,8aS)-1,4-dioxooctahydropyrrolo[1,2-a]pyrazin-3-yl]methyl (2R)-2-amino-3-sulfanylpropanoate","type":"exact"},{"name":"cyclo[(prolylserin)-O-yl] cysteinate","type":"exact"}],"termid":"MOD:01436"}


id: PBO:0080385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting 13 homolog C","termid":"PBO:0080385"}


id: GO:0050325
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + NAD+ + tauropine = H+ + NADH + pyruvate + taurine.","definition_xrefs":["RHEA:12580","EC:1.5.1.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"tauropine dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R01683","MetaCyc:TAUROPINE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"2-N-(D-1-carboxyethyl)taurine:NAD+ oxidoreductase (taurine-forming)","type":"related"},{"name":"N2-(D-1-carboxyethyl)taurine:NAD+ oxidoreductase (taurine-forming)","type":"related"}],"termid":"GO:0050325"}


id: PBO:0068108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 415","termid":"PBO:0068108"}


id: PBO:0087971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trichostatin A-insensitive homodimeric histone deacetylase (HDAC); specificity in vitro for histones H3, H4, H2A, and H2B; similar to Hda1p, Rpd3p, Hos1p, and Hos2p; deletion results in increased histone acetylation at rDNA repeats","termid":"PBO:0087971"}


id: PBO:0050879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDI1 pseudogene 2","termid":"PBO:0050879"}


id: PBO:0085490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proline permease; required for high-affinity transport of proline; also transports the toxic proline analog azetidine-2-carboxylate (AzC); PUT4 transcription is repressed in ammonia-grown cells","termid":"PBO:0085490"}


id: PBO:0027006
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_prospore_membrane_formation","termid":"PBO:0027006"}


id: GO:0045506
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-24 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-24 receptor activity","synonyms":[{"name":"IL-24 receptor activity","type":"exact"},{"name":"IL-24R","type":"exact"}],"termid":"GO:0045506"}


id: PBO:0084959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYND domain-containing protein; component of the Mub1p-Ubr2p-Rad6p ubiquitin ligase complex, required for ubiquitination and degradation of Rpn4p; interacts with Ubr2p (E3) and indirectly with Rad6p (E2); short-lived protein degraded in a Ubr2p/Rad6p dependent manner; proposed to function as both a partner and substrate of the Ubr2p/Rad6p ubiquitin ligase; similar to the A. nidulans samB gene","termid":"PBO:0084959"}


id: PBO:0027600
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_actomyosin_contractile_ring_contraction","termid":"PBO:0027600"}


id: GO:0052116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism in response to a specific chemical concentration gradient on, within or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete chemotaxis in host environment (obsolete GO:0052116)","synonyms":[{"name":"chemotaxis in response to host environment","type":"exact"}],"termid":"GO:0052116"}


id: GO:1903137
data:
  {"annotated_genes":["SJAG_01114","SJAG_05000","SJAG_03263","SJAG_04522","SJAG_02392","SJAG_01787","SJAG_00424","SJAG_04825","SJAG_00610","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99870,91911,103096,114380,95500,103666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[85502,86826,88464,98909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903139"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a cell integrity MAPK cascade.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stress-activated MAPK cascade","termid":"GO:0032872"},{"relation_name":"regulates","term_name":"cell integrity MAPK cascade","termid":"GO:0000196"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01114":null,"SJAG_01787":null,"SJAG_02392":null,"SJAG_03263":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of cell integrity MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of MAPK cascade involved in cell wall biogenesis","type":"narrow"},{"name":"regulation of MAPK cascade involved in cell wall organization or biogenesis","type":"exact"},{"name":"regulation of MAPKKK cascade involved in cell wall biogenesis","type":"exact"},{"name":"regulation of Mpk1 cascade","type":"narrow"},{"name":"regulation of PMK1-MAPK signal transduction pathway","type":"narrow"},{"name":"regulation of Pmk1 MAPK cell integrity signaling","type":"narrow"},{"name":"regulation of Pmk1 mitogen-activated protein kinase (MAPK) cell integrity pathway","type":"narrow"},{"name":"regulation of Slt2 cascade","type":"narrow"},{"name":"regulation of cell integrity MAPK pathway","type":"exact"},{"name":"regulation of cell wall biogenesis, MAPKKK cascade","type":"exact"},{"name":"regulation of cell wall integrity MAPK cascade","type":"narrow"}],"termid":"GO:1903137","terms_by_termid":{"GO:1903138":null,"GO:1903139":null}}


id: PBO:0109088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm microtubule inner protein 2","termid":"PBO:0109088"}


id: PBO:0039796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2","termid":"PBO:0039796"}


id: PBO:0043761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX10 divergent transcript","termid":"PBO:0043761"}


id: PBO:0075740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP54 antisense RNA 1","termid":"PBO:0075740"}


id: GO:1990751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a Schwann cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["PMID:16203995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schwann cell migration","termid":"GO:0036135"},{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Schwann cell chemotaxis","termid":"GO:1990751"}


id: SO:0001018
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the molecule, interacts selectively and non-covalently with antibodies, B cells or T cells.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding_site","termid":"SO:0000409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epitope","secondary_identifiers":["http://en.wikipedia.org/wiki/Epitope"],"termid":"SO:0001018"}


id: PBO:0040729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-carotene oxygenase 1","termid":"PBO:0040729"}


id: PBO:0000781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup124","termid":"PBO:0000781"}


id: FYPO:0002388
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of riboflavin binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abnormal riboflavin binding","termid":"FYPO:0002388"}


id: PBO:0028678
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_mating-type_region_heterochromatin","termid":"PBO:0028678"}


id: SO:0000591
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tertiary structure in RNA where nucleotides in a loop form base pairs with a region of RNA downstream of the loop.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_secondary_structure","termid":"SO:0000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudoknot","secondary_identifiers":["http://en.wikipedia.org/wiki/Pseudoknot"],"termid":"SO:0000591"}


id: PBO:0043251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 10","termid":"PBO:0043251"}


id: PBO:0090985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-phospholipase A2 activity regulator Pga3","termid":"PBO:0090985"}


id: PBO:0056445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 18","termid":"PBO:0056445"}


id: PBO:0112876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP, with CRAL-TRIO domain Rga10","termid":"PBO:0112876"}


id: PR:Q92348
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug183 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 183 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.03c","synonyms":[{"name":"Spom972h-mug183","type":"exact"}],"termid":"PR:Q92348"}


id: FYPO:0001297
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of palmitoyl-CoA ligase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal long-chain fatty acid-CoA ligase activity","termid":"FYPO:0001305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0005447","FYPO:0000652","FYPO:0000002","FYPO:0000654"],"is_obsolete":false,"name":"abnormal palmitoyl-CoA ligase activity","synonyms":[{"name":"abnormal palmitoyl-CoA synthetase activity","type":"exact"}],"termid":"FYPO:0001297"}


id: PBO:0030410
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_raffinose","termid":"PBO:0030410"}


id: PBO:0017924
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nemaline Myopathy","termid":"PBO:0017924"}


id: MOD:01505
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ4plex-116 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-116 reporter+balance reagent acylated residue","termid":"MOD:01499"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex-116 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex","type":"related"}],"termid":"MOD:01505"}


id: GO:0005891
data:
  {"annotated_genes":["SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95688],"is_not":false,"summary":null,"term":"GO:0005891"}]},"cv_name":"cellular_component","definition":"A protein complex that forms a transmembrane channel through which calcium ions may pass in response to changes in membrane potential.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium channel complex","termid":"GO:0034704"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"voltage-gated calcium channel complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"voltage gated calcium channel complex","type":"exact"},{"name":"voltage-dependent calcium channel complex","type":"exact"},{"name":"voltage-sensitive calcium channel complex","type":"exact"}],"termid":"GO:0005891","terms_by_termid":{"GO:0005891":null}}


id: PBO:0082974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic serine/threonine protein kinase; identified as a high-copy suppressor of the synthetic lethality of a sis2 sit4 double mutant, suggesting a role in G1/S phase progression; VHS1 has a paralog, SKS1, that arose from the whole genome duplication","termid":"PBO:0082974"}


id: PBO:0079083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon ATA) 1-1","termid":"PBO:0079083"}


id: PBO:0113185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid-binding ER tricalbin involved in ER-plasma membrane tethering; one of at least 7 proteins (Ice2p, Ist2p, Scs2/Scs22p, Tcb1-Tcb3p) that affect cER tethering and contact with the plasma membrane; regulates PI4P levels by controlling access of Sac1p to its substrate PI4P in the PM; regulates PM phospholipid homeostasis; involved in intermembrane phospholipid transfer; also localizes to the mitochondria in a phosphorylated state and is enriched in bud membranes; mRNA is targeted to the bud tip","termid":"PBO:0113185"}


id: GO:0018302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 4Fe-4S iron-sulfur cluster via tris-L-cysteinyl-L-N1'-histidino tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0284"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via tris-L-cysteinyl-L-N1'-histidino tetrairon tetrasulfide (obsolete GO:0018302)","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl-L-N1'-histidino tetrairon tetrasulphide","type":"exact"}],"termid":"GO:0018302"}


id: GO:1990166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, a region of a chromosome at which a DNA double-strand break has occurred.","definition_xrefs":["PMID:23080121","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome","termid":"GO:0034502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to site of double-strand break","synonyms":[{"name":"protein localisation to site of double-strand break","type":"exact"},{"name":"protein localization to double-strand break site","type":"exact"},{"name":"protein localization to site of DSB","type":"exact"}],"termid":"GO:1990166"}


id: PBO:0060529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase 2","termid":"PBO:0060529"}


id: GO:0045982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving purine nucleobases.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of purine nucleobase metabolic process","termid":"GO:0006141"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"purine nucleobase metabolic process","termid":"GO:0006144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"negative regulation of purine nucleobase metabolic process","synonyms":[{"name":"down regulation of purine base metabolic process","type":"exact"},{"name":"down-regulation of purine base metabolic process","type":"exact"},{"name":"downregulation of purine base metabolic process","type":"exact"},{"name":"inhibition of purine base metabolic process","type":"narrow"},{"name":"negative regulation of purine base metabolic process","type":"exact"},{"name":"negative regulation of purine base metabolism","type":"exact"}],"termid":"GO:0045982"}


id: PBO:0066448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA exonuclease 1 homolog","termid":"PBO:0066448"}


id: PBO:0003334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3074 family protein","termid":"PBO:0003334"}


id: PATO:0001000
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001000 relative alternation (obsolete PATO:0001000)","termid":"PATO:0001000"}


id: PBO:0065425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 10","termid":"PBO:0065425"}


id: PBO:0017686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb family protein, RNA polymerase I termination factor Eta2 (predicted)","termid":"PBO:0017686"}


id: GO:0097212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a lysosomal membrane. A lysosomal membrane is the lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm.","definition_xrefs":["GOC:yaf","PMID:20544854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"lysosome organization","termid":"GO:0007040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"lysosomal membrane organization","synonyms":[{"name":"lysosomal membrane organisation","type":"exact"},{"name":"lysosome membrane organization","type":"exact"}],"termid":"GO:0097212"}


id: GO:0060940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where an epicardial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell that will mature into a cardiac fibroblast.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac epithelial to mesenchymal transition","termid":"GO:0060317"},{"relation_name":"part_of","term_name":"epicardium-derived cardiac fibroblast cell development","termid":"GO:0060939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial to mesenchymal transition involved in cardiac fibroblast development","termid":"GO:0060940"}


id: GO:0050930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of positive chemotaxis","termid":"GO:0050927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction of positive chemotaxis","termid":"GO:0050930"}


id: FYPO:0006968
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of SAICAR measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular SAICAR level","synonyms":[{"name":"decreased cellular SAICAR level during mitotic cell cycle","type":"related"},{"name":"decreased cellular SAICAR level during vegetative growth","type":"exact"},{"name":"reduced cellular SAICAR level","type":"exact"}],"termid":"FYPO:0006968"}


id: PATO:0002423
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A round or lobulated protruding form resembling a nipple.","definition_xrefs":["PATOC:MPATH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillomatous","termid":"PATO:0002423"}


id: FYPO:0000958
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing mercaptoethanol.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002058","FYPO:0002057","FYPO:0000003","FYPO:0000139","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on mercaptoethanol","synonyms":[{"name":"normal cell population growth in presence of mercaptoethanol","type":"exact"},{"name":"normal cell population growth on 2-sulfanylethanol","type":"exact"},{"name":"normal cell population growth on mercaptoethanol","type":"exact"},{"name":"normal cellular response to mercaptoethanol","type":"related"},{"name":"normal vegetative cell population growth on mercaptoethanol","type":"exact"}],"termid":"FYPO:0000958"}


id: PR:O13705
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exocyst complex component 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00901","PANTHER:PTHR12100:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component sec10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13F5.06c","secondary_identifiers":["UniProtKB:O13705"],"synonyms":[{"name":"Spom972h-EXOC5","type":"exact"}],"termid":"PR:O13705"}


id: PBO:0049481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.5 linker histone, cluster member","termid":"PBO:0049481"}


id: PBO:0034301
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-tributary_of","termid":"PBO:0034301"}


id: GO:0070338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a 5'-flap structure in DNA. A DNA flap structure is one in which a single-stranded 5'-end of DNA or RNA protrudes from a double-stranded DNA molecule. 5'-flap structures can be formed during DNA repair or lagging strand synthesis; in the latter case RNA flaps form from lagging strand RNA primers.","definition_xrefs":["GOC:mah","PMID:15189154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flap-structured DNA binding","termid":"GO:0070336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"5'-flap-structured DNA binding","termid":"GO:0070338"}


id: PBO:0046553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 7","termid":"PBO:0046553"}


id: PBO:0048057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 6","termid":"PBO:0048057"}


id: PBO:0059930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 16","termid":"PBO:0059930"}


id: FYPO:0003508
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing mercury ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on mercury","synonyms":[{"name":"normal cell population growth in presence of mercury","type":"exact"},{"name":"normal cell population growth on mercury","type":"exact"},{"name":"normal cell population growth on mercury ion","type":"exact"},{"name":"normal cellular response to mercury","type":"related"},{"name":"normal growth on mercury ions","type":"exact"},{"name":"normal vegetative cell population growth on mercury","type":"exact"}],"termid":"FYPO:0003508"}


id: GO:0061568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into GDP, guanosine diphosphate, to produce GTP.","definition_xrefs":["GOC:dph","PMID:23416111"],"gene_count":0,"genotype_count":0,"name":"obsolete GDP phosphorylation (obsolete GO:0061568)","termid":"GO:0061568"}


id: PBO:0086319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to GPI-anchored aspartic proteases; such proteases are Yap1p and Yap3p; mCherry fusion protein localizes to the vacuole","termid":"PBO:0086319"}


id: PR:Q9USX3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rad60 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USX3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rad60 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1921.02","synonyms":[{"name":"Spom972h-rad60","type":"exact"}],"termid":"PR:Q9USX3"}


id: GO:0015345
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ferric enterobactin(out) + H+(out) = ferric enterobactin(in) + H+(in).","definition_xrefs":["TC:2.A.1.16.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"iron chelate transmembrane transporter activity","termid":"GO:0015603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ferric enterobactin:proton symporter activity","synonyms":[{"name":"ferric enterobactin:hydrogen symporter activity","type":"exact"},{"name":"ferric-enterobactin:proton symporter activity","type":"exact"}],"termid":"GO:0015345"}


id: GO:0017162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an aryl hydrocarbon receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"},{"relation_name":"is_a","term_name":"RNA polymerase II-specific DNA-binding transcription factor binding","termid":"GO:0061629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"aryl hydrocarbon receptor binding","termid":"GO:0017162"}


id: PBO:0040814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICD family like 3, pseudogene","termid":"PBO:0040814"}


id: PBO:0083710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein involved in a late step of GPI anchor assembly; involved in the addition of phosphoethanolamine to the multiply mannosylated glycosylphosphatidylinositol (GPI) intermediate; human PIG-Fp is a functional homolog","termid":"PBO:0083710"}


id: GO:2001078
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to (1->6)-beta-D-glucan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"(1->6)-beta-D-glucan binding","synonyms":[{"name":"(1,6)-beta-D-glucan binding","type":"exact"},{"name":"1,6-beta-D-glucan binding","type":"exact"},{"name":"1->6-beta-D-glucan binding","type":"exact"},{"name":"beta-(1,6)-D-glucan binding","type":"exact"},{"name":"beta-(1->6)-D-glucan binding","type":"exact"},{"name":"beta-1,6-D-glucan binding","type":"exact"},{"name":"beta-1->6-D-glucan binding","type":"exact"}],"termid":"GO:2001078"}


id: GO:0048255
data:
  {"annotated_genes":["SJAG_04825","SJAG_03696","SJAG_02573","SJAG_04946","SJAG_03283","SJAG_00797"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85549,92315],"is_not":false,"summary":null,"term":"GO:0048255"},{"annotations":[96153,77567,114379,86252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"}]},"cv_name":"biological_process","definition":"Prevention of degradation of mRNA molecules. In the absence of compensating changes in other processes, the slowing of mRNA degradation can result in an overall increase in the population of active mRNA molecules.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA stability","termid":"GO:0043488"},{"relation_name":"is_a","term_name":"RNA stabilization","termid":"GO:0043489"},{"relation_name":"is_a","term_name":"negative regulation of mRNA catabolic process","termid":"GO:1902373"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00797":null,"SJAG_02573":null,"SJAG_03283":null,"SJAG_03696":null,"SJAG_04825":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"mRNA stabilization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0048255","terms_by_termid":{"GO:0048255":null,"GO:0070935":null}}


id: FYPO:0007081
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the initial release of duplicated spindle pole bodies that begins with the nucleation of microtubules from each SPB within the nucleus, and normally occurs as part of the first meiotic nuclear division, does not occur.","definition_xrefs":["PomBase:mah","PMID:31532702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal initial meiotic spindle pole body separation in meiosis I","termid":"FYPO:0007080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000054","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished initial meiotic spindle pole body separation in meiosis I","synonyms":[{"name":"abolished initial meiotic spindle pole body separation in first meiotic nuclear division","type":"exact"},{"name":"abolished initial mitotic SPB separation in meiosis I","type":"exact"},{"name":"abolished meiotic spindle pole body separation during meiosis I","type":"exact"},{"name":"initial meiotic spindle pole body separation in meiosis I abolished","type":"exact"}],"termid":"FYPO:0007081"}


id: GO:0051547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of keratinocyte migration.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell migration","termid":"GO:0010632"},{"relation_name":"regulates","term_name":"keratinocyte migration","termid":"GO:0051546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of keratinocyte migration","termid":"GO:0051547"}


id: GO:0004795
data:
  {"annotated_genes":["SJAG_00432"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96897],"is_not":false,"summary":null,"term":"GO:0004795"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: O-phospho-L-homoserine + H2O = L-threonine + phosphate.","definition_xrefs":["EC:4.2.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00432":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"threonine synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:THRESYN-RXN","RHEA:10840"],"synonyms":[{"name":"O-phospho-L-homoserine phospho-lyase (adding water)","type":"related"},{"name":"O-phospho-L-homoserine phospho-lyase (adding water; L-threonine-forming)","type":"related"},{"name":"threonine synthetase activity","type":"related"}],"termid":"GO:0004795","terms_by_termid":{"GO:0004795":null}}


id: PBO:0089148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA:L-glutamate N-acetyltransferase","termid":"PBO:0089148"}


id: PBO:0039119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AIDA pseudogene 2","termid":"PBO:0039119"}


id: GO:1900008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of extrachromosomal rDNA circle accumulation involved in replicative cell aging.","definition_xrefs":["GOC:TermGenie","PMID:15020466"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of extrachromosomal rDNA circle accumulation involved in replicative cell aging (obsolete GO:1900008)","synonyms":[{"name":"down regulation of extrachromosomal rDNA circle accumulation during replicative cell ageing","type":"related"},{"name":"down regulation of extrachromosomal rDNA circle accumulation during replicative cell aging","type":"related"},{"name":"down regulation of extrachromosomal rDNA circle accumulation involved in replicative cell aging","type":"related"},{"name":"down regulation of extrachromosomal ribosomal DNA circle accumulation during replicative cell aging","type":"related"},{"name":"negative regulation of extrachromosomal rDNA circle accumulation during replicative cell ageing","type":"related"},{"name":"negative regulation of extrachromosomal rDNA circle accumulation during replicative cell aging","type":"related"},{"name":"negative regulation of extrachromosomal ribosomal DNA circle accumulation during replicative cell aging","type":"related"}],"termid":"GO:1900008"}


id: GO:1904714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chaperone-mediated autophagy.","definition_xrefs":["GO_REF:0000058","PMID:20176123","GOC:pad","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of autophagy","termid":"GO:0010506"},{"relation_name":"is_a","term_name":"regulation of protein catabolic process","termid":"GO:0042176"},{"relation_name":"regulates","term_name":"chaperone-mediated autophagy","termid":"GO:0061684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0030163","GO:0006914","GO:0008150"],"is_obsolete":false,"name":"regulation of chaperone-mediated autophagy","synonyms":[{"name":"regulation of CMA","type":"related"}],"termid":"GO:1904714"}


id: GO:0009881
data:
  {"annotated_genes":["SJAG_02860"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009882"}]},"cv_name":"molecular_function","definition":"The function of absorbing and responding to incidental electromagnetic radiation, particularly visible light. The response may involve a change in conformation.","definition_xrefs":["GOC:ai","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02860":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"photoreceptor activity","references_by_uniquename":{"PMID:23873862":null},"synonyms":[{"name":"UV-sensitive opsin","type":"narrow"},{"name":"blue-sensitive opsin","type":"narrow"},{"name":"green-sensitive opsin","type":"narrow"},{"name":"long-wave-sensitive opsin","type":"narrow"},{"name":"opsin","type":"narrow"},{"name":"red-sensitive opsin","type":"narrow"},{"name":"short-wave-sensitive opsin","type":"narrow"},{"name":"violet-sensitive opsin","type":"narrow"}],"termid":"GO:0009881","terms_by_termid":{"GO:0009882":null}}


id: PBO:0087175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit B32; forms dissociable heterodimer with Rpb7p; Rpb4/7 dissociates from RNAPII as Ser2 CTD phosphorylation increases; Rpb4/7 regulates cellular lifespan via mRNA decay process; involved in recruitment of 3'-end processing factors to transcribing RNAPII complex, export of mRNA to cytoplasm under stress conditions; also involved in translation initiation","termid":"PBO:0087175"}


id: GO:0017070
data:
  {"annotated_genes":["SJAG_00531","SJAG_03070","SJAG_04117","SJAG_04898","SJAG_04497"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89004,92910,94086,104598,113299],"is_not":false,"summary":null,"term":"GO:0017070"}]},"cv_name":"molecular_function","definition":"Binding to a U6 small nuclear RNA (U6 snRNA).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00531":null,"SJAG_03070":null,"SJAG_04117":null,"SJAG_04497":null,"SJAG_04898":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"U6 snRNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0017070","terms_by_termid":{"GO:0017070":null}}


id: PR:O14036
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A small nuclear ribonucleoprotein Sm D2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12777:SF0","PRO:DNx","OMA:SCHPO01766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein Sm D2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.03c","secondary_identifiers":["UniProtKB:O14036"],"synonyms":[{"name":"Sm-D2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SNRPD2","type":"exact"},{"name":"complexed with cdc5 protein 9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"snRNP core protein D2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14036"}


id: PBO:0061915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily D member 3 pseudogene","termid":"PBO:0061915"}


id: PBO:0085073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-transcribed region of the rDNA repeat between the 3'ETS and RDN5; required for rDNA repeat expansion; contains RNA polymerase I termination site","termid":"PBO:0085073"}


id: GO:0090481
data:
  {"annotated_genes":["SJAG_04406","SJAG_00434","SJAG_04162","SJAG_04697","SJAG_01177"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111636,84436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097624"},{"annotations":[111637,108434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072334"},{"annotations":[89156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015786"},{"annotations":[108435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120112"},{"annotations":[101026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990569"},{"annotations":[65800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015790"}]},"cv_name":"biological_process","definition":"The process in which a pyrimidine nucleotide-sugar is transported across a membrane. Pyrimidine nucleotide-sugars are pyrimidine nucleotides in glycosidic linkage with a monosaccharide or monosaccharide derivative.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar transmembrane transport","termid":"GO:0015780"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00434":null,"SJAG_01177":null,"SJAG_04162":null,"SJAG_04406":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"pyrimidine nucleotide-sugar transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0015781"],"synonyms":[{"name":"pyrimidine nucleotide-sugar membrane transport","type":"exact"},{"name":"pyrimidine nucleotide-sugar transport","type":"related"}],"termid":"GO:0090481","terms_by_termid":{"GO:0015786":null,"GO:0015790":null,"GO:0072334":null,"GO:0097624":null,"GO:0120112":null,"GO:1990569":null}}


id: GO:1901245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a B cell receptor (BCR) from the plasma membrane to the inside of the cell, which results in positive regulation of toll-like receptor 9 (TLR9) signaling. For example, internalized BCR signals to recruit TLR9 from multiple small endosomes to large autophagosome-like compartments to enhance TLR9 signaling.","definition_xrefs":["PMID:18513998","GOC:TermGenie","GOC:bf","GOC:amm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of toll-like receptor 9 signaling pathway","termid":"GO:0034165"},{"relation_name":"is_a","term_name":"B cell receptor internalization","termid":"GO:0036300"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction by receptor internalization","termid":"GO:0038010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0051179","GO:0023052","GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 9 signaling pathway by B cell receptor internalization","synonyms":[{"name":"BCR-induced TLR9 recruitment","type":"narrow"},{"name":"positive regulation of TLR9 signaling pathway by B cell receptor internalization","type":"exact"},{"name":"positive regulation of TLR9 signaling pathway by BCR endocytosis","type":"exact"},{"name":"positive regulation of TLR9 signaling pathway by BCR receptor internalization","type":"exact"},{"name":"positive regulation of toll-like receptor 9 signaling pathway by BCR endocytosis","type":"exact"},{"name":"positive regulation of toll-like receptor 9 signaling pathway by BCR receptor internalization","type":"exact"},{"name":"positive regulation of toll-like receptor 9 signalling pathway by B cell receptor internalization","type":"exact"},{"name":"positive regulation of toll-like receptor 9 signalling pathway by BCR endocytosis","type":"exact"},{"name":"positive regulation of toll-like receptor 9 signalling pathway by BCR receptor internalization","type":"exact"}],"termid":"GO:1901245"}


id: GO:0034972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of a methyl group to arginine at position 26 of the histone.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-R26 methylation (obsolete GO:0034972)","synonyms":[{"name":"histone H3 R26 methylation","type":"exact"},{"name":"histone H3R26me","type":"exact"},{"name":"histone lysine H3 R26 methylation","type":"exact"}],"termid":"GO:0034972"}


id: PBO:0075501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis and centriole associated 1","termid":"PBO:0075501"}


id: GO:0004314
data:
  {"annotated_genes":["SJAG_04107","SJAG_03972"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84185,96803],"is_not":false,"summary":null,"term":"GO:0004314"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: malonyl-CoA + [acyl-carrier protein] = CoA + malonyl-[acyl-carrier protein].","definition_xrefs":["EC:2.3.1.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-malonyltransferase activity","termid":"GO:0016419"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03972":null,"SJAG_04107":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"[acyl-carrier-protein] S-malonyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:MALONYL-COA-ACP-TRANSACYL-RXN","Reactome:R-HSA-8933547"],"synonyms":[{"name":"ACP S-malonyltransferase activity","type":"exact"},{"name":"FabD","type":"related"},{"name":"MAT","type":"related"},{"name":"MCAT activity","type":"related"},{"name":"[acyl-carrier protein] S-malonyltransferase activity","type":"exact"},{"name":"acyl carrier protein malonyltransferase activity","type":"related"},{"name":"acyl carrier proteinmalonyltransferase activity","type":"related"},{"name":"acyl-carrier-protein S-malonyltransferase activity","type":"related"},{"name":"malonyl coenzyme A-acyl carrier protein transacylase activity","type":"related"},{"name":"malonyl transacylase activity","type":"broad"},{"name":"malonyl transferase activity","type":"broad"},{"name":"malonyl-CoA-acyl carrier protein transacylase activity","type":"related"},{"name":"malonyl-CoA:ACP transacylase activity","type":"related"},{"name":"malonyl-CoA:AcpM transacylase activity","type":"related"},{"name":"malonyl-CoA:acyl carrier protein transacylase activity","type":"related"},{"name":"malonyl-CoA:acyl-carrier-protein S-malonyltransferase activity","type":"related"}],"termid":"GO:0004314","terms_by_termid":{"GO:0004314":null}}


id: GO:0046697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular and vascular changes occurring in the endometrium of the pregnant uterus just after the onset of blastocyst implantation. This process involves the proliferation and differentiation of the fibroblast-like endometrial stromal cells into large, polyploid decidual cells that eventually form the maternal component of the placenta.","definition_xrefs":["ISBN:0721662544","PMID:11133685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"part_of","term_name":"maternal placenta development","termid":"GO:0001893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"decidualization","secondary_identifiers":["Wikipedia:Decidualization"],"synonyms":[{"name":"decidual cell reaction","type":"exact"}],"termid":"GO:0046697"}


id: PBO:0040141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"achaete-scute family bHLH transcription factor 4","termid":"PBO:0040141"}


id: GO:1990893
data:
  {"annotated_genes":["SJAG_00207","SJAG_00646"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84073,107747],"is_not":false,"summary":null,"term":"GO:1990893"}]},"cv_name":"biological_process","definition":"The cell cycle process in which centromere chromatin structure is compacted prior to and during mitosis.","definition_xrefs":["PMID:21633354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic chromosome condensation","termid":"GO:0007076"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00207":null,"SJAG_00646":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0000070","GO:0008150"],"is_obsolete":false,"name":"mitotic chromosome centromere condensation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitotic chromosome condensation at kinetochore","type":"exact"}],"termid":"GO:1990893","terms_by_termid":{"GO:1990893":null}}


id: PBO:0080100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP6 small subunit processome component","termid":"PBO:0080100"}


id: PBO:0067599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 762, pseudogene","termid":"PBO:0067599"}


id: PBO:0018125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malate dehydrogenase Mdh1 (predicted)","termid":"PBO:0018125"}


id: PBO:0073520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain binding protein 2","termid":"PBO:0073520"}


id: GO:0018046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-methionine amide by hydrolysis and oxidation of an interior Met-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0093"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-methionine amidation (obsolete GO:0018046)","termid":"GO:0018046"}


id: PBO:0066136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retina and anterior neural fold homeobox","termid":"PBO:0066136"}


id: PBO:0042138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 2","termid":"PBO:0042138"}


id: GO:0052536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of systemic acquired resistance in the symbiont organism; systemic acquired resistance is a salicylic acid-mediated response that confers broad spectrum systemic resistance. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of systemic acquired resistance in symbiont (obsolete GO:0052536)","synonyms":[{"name":"positive regulation by organism of systemic acquired resistance in symbiont","type":"exact"}],"termid":"GO:0052536"}


id: FYPO:0004783
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a histone methyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"},{"relation_name":"is_a","term_name":"abnormal protein methyltransferase activity","termid":"FYPO:0005723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000641","FYPO:0000661","FYPO:0000652","FYPO:0005447"],"is_obsolete":false,"name":"abnormal histone methyltransferase activity","termid":"FYPO:0004783"}


id: PBO:0078991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon AGT) 1-1","termid":"PBO:0078991"}


id: GO:0036516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a dopaminergic neuron growth cone is directed to a specific target site in response to an attractive chemical signal.","definition_xrefs":["GOC:bf","PMID:21106844","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemoattraction of axon","termid":"GO:0061642"},{"relation_name":"part_of","term_name":"dopaminergic neuron axon guidance","termid":"GO:0036514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction of dopaminergic neuron axon","synonyms":[{"name":"chemoattraction of DA axon","type":"exact"},{"name":"chemoattraction of dopaminergic axon","type":"exact"}],"termid":"GO:0036516"}


id: PBO:0089955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotrimeric G protein beta (WD repeat) subunit Git5","termid":"PBO:0089955"}


id: PATO:0000427
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's occurring or appearing again or repeatedly.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recurrent","termid":"PATO:0000427"}


id: GO:0003394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix that contributes to the process of retrograde extension of a dendrite.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion involved in retrograde extension","termid":"GO:0003392"},{"relation_name":"part_of","term_name":"dendrite development by retrograde extension","termid":"GO:0003390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell adhesion involved in dendrite retrograde extension","termid":"GO:0003394"}


id: GO:0042498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lipopeptide containing a nonprotein moiety consisting of two acyl groups.","definition_xrefs":["GOC:add","PMID:12524386","PMID:12077222","PMID:2757794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipopeptide binding","termid":"GO:0071723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"diacyl lipopeptide binding","synonyms":[{"name":"bacterial diacyl lipopeptide binding","type":"narrow"},{"name":"bacterial diacyl lipoprotein binding","type":"related"},{"name":"diacylated lipopeptide binding","type":"exact"}],"termid":"GO:0042498"}


id: GO:0045051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of protein insertion into the endoplasmic reticulum (ER) membrane in which signal anchor sequences function as both ER signal sequences and membrane anchor sequences.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into ER membrane","termid":"GO:0045048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein insertion into ER membrane by internal uncleaved signal-anchor sequence","synonyms":[{"name":"internal uncleaved signal-anchor sequence mediated protein insertion into ER membrane","type":"exact"},{"name":"protein insertion into ER membrane, internal uncleaved signal-anchor sequence mediated","type":"exact"},{"name":"protein insertion into endoplasmic reticulum membrane by internal uncleaved signal-anchor sequence","type":"exact"},{"name":"protein-ER insertion by internal uncleaved signal-anchor sequence","type":"exact"},{"name":"protein-endoplasmic reticulum insertion by internal uncleaved signal-anchor sequence","type":"exact"}],"termid":"GO:0045051"}


id: PBO:0056666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28 pseudogene 4","termid":"PBO:0056666"}


id: PR:P87216
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vip1 gene.","definition_xrefs":["UniProtKB:P87216","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein vip1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.06","synonyms":[{"name":"Spom972h-vip1","type":"exact"}],"termid":"PR:P87216"}


id: GO:1902893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microRNA (miRNA) gene transcription.","definition_xrefs":["GOC:dph","GOC:kmv","GO_REF:0000058","GOC:TermGenie","PMID:24699545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"is_a","term_name":"regulation of miRNA metabolic process","termid":"GO:2000628"},{"relation_name":"regulates","term_name":"miRNA transcription","termid":"GO:0061614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006355","GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"regulation of miRNA transcription","synonyms":[{"name":"regulation of miRNA gene transcription","type":"exact"},{"name":"regulation of microRNA gene transcription","type":"exact"},{"name":"regulation of pri-miRNA transcription by RNA polymerase II","type":"exact"},{"name":"regulation of pri-miRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of primary miRNA gene transcription","type":"exact"}],"termid":"GO:1902893"}


id: FYPO:0007185
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is abnormally arrested at the mitotic G2/M phase transition during a cellular response to hydroxyurea.","definition_xrefs":["PMID:28377506","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0000400"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to hydroxyurea","termid":"FYPO:0001933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0000298","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during cellular response to hydroxyurea","synonyms":[{"name":"abnormal cell cycle arrest at mitotic G2/M phase transition during cellular response to HU","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic G2 phase during cellular response to hydroxyurea","type":"related"},{"name":"abnormal mitotic cell cycle arrest at mitotic G2/M phase transition during cellular response to hydroxyurea","type":"exact"},{"name":"abolished mitotic G2/M phase transition during cellular response to hydroxyurea","type":"related"},{"name":"cell cycle arrest at mitotic G2/M phase transition during cellular response to hydroxyurea","type":"exact"},{"name":"mitotic G2 phase arrest during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0007185"}


id: GO:0008143
data:
  {"annotated_genes":["SJAG_01910","SJAG_03448","SJAG_03214","SJAG_03283","SJAG_01650","SJAG_02808","SJAG_03747","SJAG_04271","SJAG_04601","SJAG_04427","SJAG_00425","SJAG_01222"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72110,73605,85148,85513,85552,87981,93180,93604,94577,100366,103779,105257],"is_not":false,"summary":null,"term":"GO:0008143"}]},"cv_name":"molecular_function","definition":"Binding to a sequence of adenylyl residues in an RNA molecule, such as the poly(A) tail, a sequence of adenylyl residues at the 3' end of eukaryotic mRNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly-purine tract binding","termid":"GO:0070717"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00425":null,"SJAG_01222":null,"SJAG_01650":null,"SJAG_01910":null,"SJAG_02808":null,"SJAG_03214":null,"SJAG_03283":null,"SJAG_03448":null,"SJAG_03747":null,"SJAG_04271":null,"SJAG_04427":null,"SJAG_04601":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"poly(A) binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"poly(A) binding, within an RNA molecule","type":"exact"},{"name":"poly(rA) binding","type":"exact"},{"name":"poly-A binding","type":"exact"},{"name":"polyadenylate binding","type":"exact"}],"termid":"GO:0008143","terms_by_termid":{"GO:0008143":null}}


id: PBO:0028818
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_replication_forks_during_cellular_response_to_hydroxyurea","termid":"PBO:0028818"}


id: PBO:0068469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 46, pseudogene","termid":"PBO:0068469"}


id: PBO:0088186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc-finger protein; involved in transcriptional control of both nuclear and mitochondrial genes, many of which specify products required for glycerol-based growth, respiration, and other functions; RSF2 has a paralog, TDA9, that arose from the whole genome duplication; relocalizes from nucleus to cytoplasm upon DNA replication stress","termid":"PBO:0088186"}


id: GO:0052446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of symbiont processes resulting in the thickening of its cell walls, occurring as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of defense-related symbiont cell wall thickening (obsolete GO:0052446)","synonyms":[{"name":"modulation by organism of defense-related symbiont cell wall thickening","type":"exact"},{"name":"modulation by organism of symbiont defensive cell wall thickening","type":"related"}],"termid":"GO:0052446"}


id: FYPO:0008154
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric heterochromatin is normal (i.e. indistinguishable from wild type.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to centromeric chromatin","termid":"FYPO:0005072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to centromeric heterochromatin","termid":"FYPO:0008154"}


id: PBO:0053302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lin-9 DREAM MuvB core complex component","termid":"PBO:0053302"}


id: FYPO:0005752
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more 2'-deoxyribonucleoside triphosphates (dNTPs) measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular dNTP level","synonyms":[{"name":"increased cellular dNTP level during mitotic cell cycle","type":"related"},{"name":"increased cellular dNTP level during vegetative growth","type":"exact"},{"name":"increased dNTP accumulation","type":"related"}],"termid":"FYPO:0005752"}


id: PBO:0070401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RP1 like 1","termid":"PBO:0070401"}


id: GO:1903839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mRNA 3'-UTR binding.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:19575011","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mRNA binding","termid":"GO:1902416"},{"relation_name":"is_a","term_name":"regulation of mRNA 3'-UTR binding","termid":"GO:1903837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mRNA 3'-UTR binding","synonyms":[{"name":"activation of mRNA 3' UTR binding","type":"narrow"},{"name":"activation of mRNA 3'-UTR binding","type":"narrow"},{"name":"positive regulation of mRNA 3' UTR binding","type":"exact"},{"name":"up regulation of mRNA 3' UTR binding","type":"exact"},{"name":"up regulation of mRNA 3'-UTR binding","type":"exact"},{"name":"up-regulation of mRNA 3' UTR binding","type":"exact"},{"name":"up-regulation of mRNA 3'-UTR binding","type":"exact"},{"name":"upregulation of mRNA 3' UTR binding","type":"exact"},{"name":"upregulation of mRNA 3'-UTR binding","type":"exact"}],"termid":"GO:1903839"}


id: PBO:0044184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTNS antisense RNA 1","termid":"PBO:0044184"}


id: PBO:0033832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase Psk1","termid":"PBO:0033832"}


id: GO:0015413
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Ni2+(out) = ADP + phosphate + Ni2+(in).","definition_xrefs":["RHEA:15557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nickel cation transmembrane transporter activity","termid":"GO:0015099"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type nickel transporter activity","secondary_identifiers":["EC:7.2.2.11","GO:0102016","MetaCyc:ABC-20-RXN"],"synonyms":[{"name":"ATP-dependent nickel transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled nickel transmembrane transporter activity","type":"related"},{"name":"nickel ABC transporter","type":"exact"},{"name":"nickel ABC transporter activity","type":"exact"},{"name":"nickel porter activity","type":"related"},{"name":"nickel transporting ATPase activity","type":"related"},{"name":"nickel-transporting ATPase activity","type":"related"}],"termid":"GO:0015413"}


id: GO:0005819
data:
  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id: PBO:0069050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 296, pseudogene","termid":"PBO:0069050"}


id: GO:0090283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency, or extent of the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid in any compartment of the Golgi apparatus.","definition_xrefs":["GOC:pr","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein glycosylation in Golgi (obsolete GO:0090283)","synonyms":[{"name":"regulation of protein amino acid glycosylation in Golgi","type":"exact"}],"termid":"GO:0090283"}


id: PBO:0062516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily K member 2 pseudogene","termid":"PBO:0062516"}


id: GO:0050796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of insulin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"is_a","term_name":"regulation of peptide hormone secretion","termid":"GO:0090276"},{"relation_name":"regulates","term_name":"insulin secretion","termid":"GO:0030073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of insulin secretion","termid":"GO:0050796"}


id: PBO:0059557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1A","termid":"PBO:0059557"}


id: GO:1901236
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of 4-(trimethylammonio)butanoate from one side of a membrane to the other.","definition_xrefs":["PMID:21784948","GOC:TermGenie","PMID:16952940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quaternary ammonium group transmembrane transporter activity","termid":"GO:0015651"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"4-(trimethylammonio)butanoate transmembrane transporter activity","secondary_identifiers":["RHEA:32835"],"termid":"GO:1901236"}


id: PBO:0078150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 28 (pseudogene)","termid":"PBO:0078150"}


id: PBO:0069726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1007, pseudogene","termid":"PBO:0069726"}


id: SOFP:encoded_symbol
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"dicistronic CDS/proteins are attached to a single gene feature representing the whole cassette - in which case the symbol refers to the cassette. encoded_symbol refers to a gene in the sense of non-overlapping CDS set. cf Adh and Adhr in dmel","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encoded_symbol","termid":"SOFP:encoded_symbol"}


id: PBO:0051779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing B2 pseudogene","termid":"PBO:0051779"}


id: PBO:0084551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the seripauperin multigene family; encoded mainly in subtelomeric region; active during alcoholic fermentation; regulated by anaerobiosis; negatively regulated by oxygen; repressed by heme","termid":"PBO:0084551"}


id: PBO:0040980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biorientation of chromosomes in cell division 1","termid":"PBO:0040980"}


id: FYPO:0005757
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to one or more membranes does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to membrane during vegetative growth","synonyms":[{"name":"abolished protein localisation to membrane during vegetative growth","type":"exact"},{"name":"abolished protein localization to membrane during mitotic cell cycle","type":"related"},{"name":"protein absent from membrane during vegetative growth","type":"related"},{"name":"protein localization to membrane abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0005757"}


id: PBO:0078352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 18-1","termid":"PBO:0078352"}


id: GO:0097518
data:
  {"annotated_genes":["SJAG_04887","SJAG_00938","SJAG_02864"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94349,115643,91342,104181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070648"}]},"cv_name":"cellular_component","definition":"An actin filament bundle in which the filaments are tightly packed (approximately 10-20 nm apart) and oriented with the same polarity.","definition_xrefs":["GOC:mah","ISBN:0815316194","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament bundle","termid":"GO:0032432"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_02864":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"parallel actin filament bundle","references_by_uniquename":{"GO_REF:0000107":null,"PMID:36148799":null},"termid":"GO:0097518","terms_by_termid":{"GO:0070648":null}}


id: PBO:0063517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal dependent decarboxylase domain containing 2, pseudogene","termid":"PBO:0063517"}


id: GO:2000439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of monocyte extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular extravasation","termid":"GO:0002693"},{"relation_name":"is_a","term_name":"positive regulation of mononuclear cell migration","termid":"GO:0071677"},{"relation_name":"is_a","term_name":"regulation of monocyte extravasation","termid":"GO:2000437"},{"relation_name":"positively_regulates","term_name":"monocyte extravasation","termid":"GO:0035696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of monocyte extravasation","termid":"GO:2000439"}


id: PBO:0077806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOX high mobility group box family member 4","termid":"PBO:0077806"}


id: PBO:0049690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAND2 antisense RNA 1","termid":"PBO:0049690"}


id: PBO:0046715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVA1C pseudogene 1","termid":"PBO:0046715"}


id: PBO:0038813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 20","termid":"PBO:0038813"}


id: FYPO:0006220
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell septum does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"},{"relation_name":"is_a","term_name":"abolished protein localization to cell division site","termid":"FYPO:0001880"},{"relation_name":"is_a","term_name":"abnormal protein localization to septum","termid":"FYPO:0002718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to septum","synonyms":[{"name":"abolished protein localisation to septum","type":"exact"},{"name":"abolished protein localization to septum during mitotic cell cycle","type":"related"},{"name":"protein absent from septum","type":"related"},{"name":"protein localization to septum abolished","type":"exact"},{"name":"protein localization to septum abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0006220"}


id: GO:0022016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of a glioblast in the pallium. A glioblast is a dividing precursor cell that gives rise to glial cells.","definition_xrefs":["GOC:jid","GOC:cls","GO_REF:0000021","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glioblast division","termid":"GO:0048860"},{"relation_name":"part_of","term_name":"pallium cell proliferation in forebrain","termid":"GO:0022013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pallium glioblast division","synonyms":[{"name":"glioblast cell division in pallium","type":"exact"}],"termid":"GO:0022016"}


id: PBO:0089051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase with rhodanese domain, unknown specificity","termid":"PBO:0089051"}


id: PBO:0036459
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative transcript","termid":"PBO:0036459"}


id: PBO:0041967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 9B","termid":"PBO:0041967"}


id: PBO:0012530
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_division_of","termid":"PBO:0012530"}


id: PBO:0113231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH diphosphatase (pyrophosphatase); hydrolyzes the pyrophosphate linkage in NADH and related nucleotides; localizes to peroxisomes; enzymatic component of one of several partly redundant surveillance pathways involved in decapping of non-canonical nicotinamide adenine dinucleotide (NAD) capped nuclear mRNAs (NAD-RNAs); also possesses deCoAping activity involved in the decapping of non-canonical dephospho-CoA capped RNA (dpCoA-RNA); nudix hydrolase family member","termid":"PBO:0113231"}


id: GO:0035434
data:
  {"annotated_genes":["SJAG_01493","SJAG_04246","SJAG_02399","SJAG_04743","SJAG_00547","SJAG_01119","SJAG_03079"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61763,65780,84010,99854,100671,110656],"is_not":false,"summary":null,"term":"GO:0035434"},{"annotations":[103906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060003"},{"annotations":[110655,84009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098705"},{"annotations":[97541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097430"}]},"cv_name":"biological_process","definition":"The directed movement of copper cation across a membrane.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transport","termid":"GO:0006825"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00547":null,"SJAG_01119":null,"SJAG_01493":null,"SJAG_02399":null,"SJAG_03079":null,"SJAG_04246":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"copper ion transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:1901473"],"synonyms":[{"name":"copper cation transmembrane transport","type":"exact"},{"name":"copper ion membrane transport","type":"exact"}],"termid":"GO:0035434","terms_by_termid":{"GO:0035434":null,"GO:0060003":null,"GO:0097430":null,"GO:0098705":null}}


id: PBO:0041879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CATIP antisense RNA 1","termid":"PBO:0041879"}


id: PBO:0000854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate aminotransferase (predicted)","termid":"PBO:0000854"}


id: PBO:0041985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC28A antisense RNA 1","termid":"PBO:0041985"}


id: PBO:0027927
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_pheromone_and_nitrogen_starvation","termid":"PBO:0027927"}


id: GO:0102295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-methylumbelliferyl glucoside + malonyl-CoA = 4-methylumbelliferone 6'-O-malonylglucoside + coenzyme A.","definition_xrefs":["GOC:pz","EC:2.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"4-methylumbelliferyl glucoside 6'-O-malonyltransferase activity","secondary_identifiers":["MetaCyc:RXN-12699"],"termid":"GO:0102295"}


id: PBO:0057767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2113","termid":"PBO:0057767"}


id: GO:0035309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that subdivides the wing imaginal disc into the wing and notum (body wall) subfields, thus determining whether cells ultimately differentiate wing or notum-specific structures.","definition_xrefs":["PMID:10860999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"wing disc development","termid":"GO:0035220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wing and notum subfield formation","termid":"GO:0035309"}


id: PBO:0000280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fen1 family nuclease, XP-G family (predicted)","termid":"PBO:0000280"}


id: PBO:0072292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 10","termid":"PBO:0072292"}


id: PATO:0002155
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rotation quality inhering in a bearer by virtue of being rotated towards the middle of an organism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rotated","termid":"PATO:0001599"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medially rotated","synonyms":[{"name":"internally rotated","type":"exact"}],"termid":"PATO:0002155"}


id: MOD:01152
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a carboxylic acid group.","definition_xrefs":["Unimod:299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylated residue","synonyms":[{"name":"Carboxy","type":"related"},{"name":"Carboxylation","type":"related"}],"termid":"MOD:01152"}


id: PBO:0041592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 5A pseudogene 1","termid":"PBO:0041592"}


id: PBO:0060750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B3","termid":"PBO:0060750"}


id: GO:0036489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of neuromelanin. Neuromelanin is a polymer of 5,6-dihydroxyindole monomers.","definition_xrefs":["Wiki:Neuromelanin","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromelanin biosynthetic process","synonyms":[{"name":"neuromelanin anabolism","type":"exact"},{"name":"neuromelanin biosynthesis","type":"exact"},{"name":"neuromelanin formation","type":"exact"},{"name":"neuromelanin synthesis","type":"exact"}],"termid":"GO:0036489"}


id: FYPO:0000795
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glycerol dehydrogenase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal glycerol dehydrogenase activity","termid":"FYPO:0000793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"decreased glycerol dehydrogenase activity","synonyms":[{"name":"reduced glycerol dehydrogenase activity","type":"exact"}],"termid":"FYPO:0000795"}


id: PBO:0049650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 4","termid":"PBO:0049650"}


id: PBO:0051313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-9 (pseudogene)","termid":"PBO:0051313"}


id: GO:0038020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the return of an insulin receptor to an active state at the plasma membrane. An active state is when the receptor is ready to receive an insulin signal. Internalized insulin receptors can be recycled to the plasma membrane or sorted to lysosomes for protein degradation.","definition_xrefs":["GOC:signaling","GOC:bf","PMID:3907718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor recycling","termid":"GO:0001881"},{"relation_name":"part_of","term_name":"positive regulation of insulin receptor signaling pathway","termid":"GO:0046628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"insulin receptor recycling","termid":"GO:0038020"}


id: GO:0046551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a retinal cone cell. A retinal cone cell is one of the two photoreceptor subtypes in a camera-type eye.","definition_xrefs":["GOC:mtg_sensu","PMID:3076112","PMID:3937883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"camera-type eye photoreceptor cell fate commitment","termid":"GO:0060220"},{"relation_name":"part_of","term_name":"retinal cone cell differentiation","termid":"GO:0042670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retinal cone cell fate commitment","termid":"GO:0046551"}


id: SO:0002050
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter that allows for continual transcription of gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter","termid":"SO:0000167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"constitutive_promoter","synonyms":[{"name":"constitutive promoter","type":"exact"}],"termid":"SO:0002050"}


id: GO:0018477
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzaldehyde + NADP+ + H2O = benzoate + NADPH + H+.","definition_xrefs":["RHEA:21660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzaldehyde dehydrogenase [NAD(P)+] activity","termid":"GO:0019115"},{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NADP+) activity","termid":"GO:0033721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"benzaldehyde dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:BENZALDEHYDE-DEHYDROGENASE-NADP+-RXN","EC:1.2.1.7","UM-BBD_enzymeID:r0214","UM-BBD_enzymeID:r0222"],"synonyms":[{"name":"NADP-linked benzaldehyde dehydrogenase","type":"related"},{"name":"benzaldehyde:NADP+ oxidoreductase","type":"related"}],"termid":"GO:0018477"}


id: PBO:0054510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1910","termid":"PBO:0054510"}


id: GO:2000867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of estrone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid hormone secretion","termid":"GO:2000831"},{"relation_name":"regulates","term_name":"estrone secretion","termid":"GO:0035943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of estrone secretion","synonyms":[{"name":"regulation of 3-hydroxy-1,3,5(10)-estratrien-17-one secretion","type":"exact"},{"name":"regulation of folliculin secretion","type":"exact"}],"termid":"GO:2000867"}


id: GO:0016059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of restoring the photoreceptor cell to its unexcited state after termination of the stimulus (photon).","definition_xrefs":["PMID:8316831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of opsin-mediated signaling pathway","termid":"GO:0022400"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"negatively_regulates","term_name":"G protein-coupled opsin signaling pathway","termid":"GO:0016056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of opsin-mediated signaling pathway","synonyms":[{"name":"deactivation of opsin mediated signaling","type":"narrow"},{"name":"deactivation of rhodopsin mediated signalling","type":"narrow"},{"name":"negative regulation of rhodopsin-mediated signaling pathway","type":"narrow"},{"name":"rod response recovery","type":"broad"}],"termid":"GO:0016059"}


id: PBO:0027651
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_phosphatidylcholine_level","termid":"PBO:0027651"}


id: PBO:0077586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymopoietin","termid":"PBO:0077586"}


id: PBO:0078136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 15 (pseudogene)","termid":"PBO:0078136"}


id: PBO:0090723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall 1,3-beta-glucanosyltransferase Gas4","termid":"PBO:0090723"}


id: GO:1900408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to oxidative stress.","definition_xrefs":["GOC:TermGenie","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cellular response to oxidative stress","termid":"GO:1900407"},{"relation_name":"is_a","term_name":"negative regulation of response to oxidative stress","termid":"GO:1902883"},{"relation_name":"negatively_regulates","term_name":"cellular response to oxidative stress","termid":"GO:0034599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to oxidative stress","synonyms":[{"name":"down regulation of adaptive response to oxidative stress","type":"narrow"},{"name":"down regulation of cellular response to oxidative stress","type":"exact"},{"name":"down-regulation of adaptive response to oxidative stress","type":"narrow"},{"name":"down-regulation of cellular response to oxidative stress","type":"exact"},{"name":"downregulation of adaptive response to oxidative stress","type":"narrow"},{"name":"downregulation of cellular response to oxidative stress","type":"exact"},{"name":"inhibition of adaptive response to oxidative stress","type":"narrow"},{"name":"inhibition of cellular response to oxidative stress","type":"narrow"},{"name":"negative regulation of adaptive response to oxidative stress","type":"narrow"}],"termid":"GO:1900408"}


id: FYPO:0006395
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 in heterochromatin at subtelomeric regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 acetylation during vegetative growth","termid":"FYPO:0003223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H3-K9 acetylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"normal histone H3-K9 acetylation at subtelomere during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 acetylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 acetylation at telomeric heterochromatin during vegetative growth","type":"related"},{"name":"normal histone H3K9 acetylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0006395"}


