# terms

id: GO:0004193
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds. Similar to cathepsin D, but slightly broader specificity.","definition_xrefs":["EC:3.4.23.34"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin E activity (obsolete GO:0004193)","synonyms":[{"name":"EMAP","type":"related"},{"name":"SMP","type":"related"},{"name":"cathepsin D-like acid proteinase activity","type":"related"},{"name":"cathepsin D-type proteinase activity","type":"related"},{"name":"cathepsin E activity","type":"exact"},{"name":"cathepsin E-like acid proteinase activity","type":"related"},{"name":"erythrocyte membrane aspartic proteinase activity","type":"narrow"},{"name":"non-pepsin proteinase activity","type":"related"},{"name":"slow-moving proteinase activity","type":"related"}],"termid":"GO:0004193"}


id: GO:1903744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anterograde synaptic vesicle transport.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:25329901","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle transport along microtubule","termid":"GO:1901610"},{"relation_name":"is_a","term_name":"positive regulation of synaptic vesicle transport","termid":"GO:1902805"},{"relation_name":"is_a","term_name":"regulation of anterograde synaptic vesicle transport","termid":"GO:1903742"},{"relation_name":"positively_regulates","term_name":"anterograde synaptic vesicle transport","termid":"GO:0048490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of anterograde synaptic vesicle transport","synonyms":[{"name":"activation of anterograde synaptic vesicle transport","type":"narrow"},{"name":"up regulation of anterograde synaptic vesicle transport","type":"exact"},{"name":"up-regulation of anterograde synaptic vesicle transport","type":"exact"},{"name":"upregulation of anterograde synaptic vesicle transport","type":"exact"}],"termid":"GO:1903744"}


id: PBO:0038980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylserine hydrolase","termid":"PBO:0038980"}


id: PBO:0053992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1311","termid":"PBO:0053992"}


id: PBO:0074923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 91B","termid":"PBO:0074923"}


id: PBO:0004165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"siderophore-iron transporter Str1","termid":"PBO:0004165"}


id: PBO:0073405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 8","termid":"PBO:0073405"}


id: PBO:0042118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 190","termid":"PBO:0042118"}


id: PBO:0017538
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor suppressor syndrome","termid":"PBO:0017538"}


id: PBO:0090481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-A chaperone, CHD family Hrp1","termid":"PBO:0090481"}


id: GO:0047263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ceramide + UDP-galactose = D-galactosylceramide + UDP.","definition_xrefs":["GOC:curator"],"gene_count":0,"genotype_count":0,"name":"obsolete N-acylsphingosine galactosyltransferase activity (obsolete GO:0047263)","termid":"GO:0047263"}


id: GO:0015987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers GTP synthesis.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy coupled proton transport, down electrochemical gradient","termid":"GO:0015985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"GTP synthesis coupled proton transport","termid":"GO:0015987"}


id: GO:0052751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-mannose + H2O = GMP + mannose-1-phosphate.","definition_xrefs":["PMID:16766526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"GDP-mannose hydrolase activity","synonyms":[{"name":"GDP-mannose pyrophosphatase activity","type":"related"}],"termid":"GO:0052751"}


id: PBO:0057818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3138","termid":"PBO:0057818"}


id: SO:0000185
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that in its initial state requires modification to be functional.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary_transcript","secondary_identifiers":["http://en.wikipedia.org/wiki/Primary_transcript"],"synonyms":[{"name":"INSDC_feature:precursor_RNA","type":"exact"},{"name":"INSDC_feature:prim_transcript","type":"exact"},{"name":"precursor RNA","type":"exact"},{"name":"primary transcript","type":"exact"}],"termid":"SO:0000185"}


id: FYPO:0003256
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of proline into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abnormal proline import","synonyms":[{"name":"abnormal L-proline import","type":"exact"},{"name":"abnormal L-proline import across plasma membrane","type":"exact"},{"name":"abnormal proline import during mitotic cell cycle","type":"related"},{"name":"abnormal proline import during vegetative growth","type":"exact"},{"name":"abnormal proline import into cell","type":"exact"},{"name":"abnormal proline uptake","type":"exact"}],"termid":"FYPO:0003256"}


id: MOD:01664
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to a 7'-hydroxy-L-tryptophan.","definition_xrefs":["RESID:AA0520","PubMed:20223990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated tryptophan","termid":"MOD:01622"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"7'-hydroxy-L-tryptophan","synonyms":[{"name":"(2S)-2-amino-3-(7-hydroxy-1H-indol-3-yl)propanoic acid","type":"exact"},{"name":"7'-hydroxy-L-tryptophan","type":"exact"},{"name":"7-hydroxy-L-tryptophan","type":"exact"}],"termid":"MOD:01664"}


id: GO:0106346
data:
  {"annotated_genes":["SJAG_01958"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91253],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120048"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from a donor to a nucleoside residue in an snRNA molecule.","definition_xrefs":["PMID:27573892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA methyltransferase activity","termid":"GO:0008173"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01958":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"snRNA methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106346","terms_by_termid":{"GO:0120048":null}}


id: GO:0035515
data:
  {"annotated_genes":["SJAG_00892"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990984"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from one or more nucleosides within a RNA molecule involving the oxidation (i.e. electron loss) of one or more atoms.","definition_xrefs":["PMID:18775698","PMID:12594517","PMID:16482161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"demethylase activity","termid":"GO:0032451"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00892":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0140098","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidative RNA demethylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8857692"],"synonyms":[{"name":"2-oxoglutarate-dependent RNA demethylase","type":"exact"}],"termid":"GO:0035515","terms_by_termid":{"GO:1990984":null}}


id: PBO:0063506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase phosphatase regulatory subunit 2, pseudogene","termid":"PBO:0063506"}


id: PBO:0085001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of actin nucleation-promoting factor activity; interacts with Las17p, a homolog of human Wiskott-Aldrich Syndrome protein (WASP), via an N-terminal SH3 domain, and along with LSB1 cooperatively inhibits the nucleation of actin filaments; short-lived protein whose levels increase in response to thermal stress; induces the formation of the [PIN+] and [RNQ+] prions when overproduced; PIN3 has a paralog, LSB1, that arose from the whole genome duplication","termid":"PBO:0085001"}


id: PBO:0052324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1522","termid":"PBO:0052324"}


id: GO:0008312
data:
  {"annotated_genes":["SJAG_03411","SJAG_01840","SJAG_02456","SJAG_01759","SJAG_03684","SJAG_01282"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86884,87677,110435,111200,112002,112724],"is_not":false,"summary":null,"term":"GO:0008312"}]},"cv_name":"molecular_function","definition":"Binding to a 7S RNA, the RNA component of the signal recognition particle (SRP).","definition_xrefs":["GOC:jl","PMID:6181418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01282":null,"SJAG_01759":null,"SJAG_01840":null,"SJAG_02456":null,"SJAG_03411":null,"SJAG_03684":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"7S RNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008312","terms_by_termid":{"GO:0008312":null}}


id: PBO:0063513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decaprenyl diphosphate synthase subunit 1 pseudogene 2","termid":"PBO:0063513"}


id: PBO:0048659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GK intronic transcript 1","termid":"PBO:0048659"}


id: GO:0140953
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl27-[histone H3] + S-adenosyl-L-methionine = H+ + N6-methyl-L-lysyl27-[histone H3] + S-adenosyl-L-homocysteine. This reaction is the addition of a single methyl group to the unmethylated lysine residue at position 27 of histone H3, producing histone H3K27me.","definition_xrefs":["RHEA:60296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K27 methyltransferase activity","termid":"GO:0046976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0140096","GO:0008276","GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"histone H3K27 monomethyltransferase activity","secondary_identifiers":["EC:2.1.1.369"],"synonyms":[{"name":"histone H3-K27 methylation","type":"broad"},{"name":"histone H3-K27 monomethylase activity","type":"exact"},{"name":"histone H3K27 methylation","type":"broad"},{"name":"histone H3K27 monomethylase activity","type":"exact"},{"name":"histone lysine N-monomethyltransferase activity (H3-K27 specific)","type":"exact"}],"termid":"GO:0140953"}


id: PBO:0039233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKTIP pseudogene 2","termid":"PBO:0039233"}


id: PBO:0040910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 14","termid":"PBO:0040910"}


id: PBO:0041055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 7 pseudogene 6","termid":"PBO:0041055"}


id: PBO:0005774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoamyl acetate hydrolytic enzyme Iah1 (predicted)","termid":"PBO:0005774"}


id: GO:0075733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a virus, or part of a virus, within the host cell.","definition_xrefs":["GOC:bf","GOC:jl","GOC:ai","PMID:11733033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport of virus","termid":"GO:0046794"},{"relation_name":"part_of","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular transport of virus","secondary_identifiers":["GO:0046796","GO:0046795","GO:0046788"],"synonyms":[{"name":"egress of virus within host cell","type":"exact"},{"name":"intracellular transport of viral material","type":"exact"},{"name":"intracellular virion transport","type":"related"},{"name":"movement of virus within host cell","type":"exact"},{"name":"viral egress","type":"related"},{"name":"viral genome transport in host cell","type":"exact"}],"termid":"GO:0075733"}


id: GO:0003030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a hydrogen ion stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of hydrogen ion","termid":"GO:0003030"}


id: PBO:0086660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified as interacting with Hsp82p in a high-throughput two-hybrid screen","termid":"PBO:0086660"}


id: PBO:0041140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTF3 divergent transcript","termid":"PBO:0041140"}


id: PBO:0052765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 57","termid":"PBO:0052765"}


id: GO:1902036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hematopoietic stem cell differentiation.","definition_xrefs":["PMID:23403623","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901532"},{"relation_name":"is_a","term_name":"regulation of stem cell differentiation","termid":"GO:2000736"},{"relation_name":"regulates","term_name":"hematopoietic stem cell differentiation","termid":"GO:0060218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hematopoietic stem cell differentiation","synonyms":[{"name":"regulation of haematopoietic stem cell differentiation","type":"exact"},{"name":"regulation of haemopoietic stem cell differentiation","type":"exact"},{"name":"regulation of hemopoietic stem cell differentiation","type":"exact"}],"termid":"GO:1902036"}


id: GO:0050585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxyphenylpyruvate + O2 = 4-hydroxymandelate + CO2.","definition_xrefs":["MetaCyc:1.13.11.46-RXN","EC:1.13.11.46"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-hydroxymandelate synthase activity","secondary_identifiers":["RHEA:21376","Reactome:R-HSA-9856718"],"synonyms":[{"name":"4-hydroxyphenylpyruvate dioxygenase II activity","type":"narrow"},{"name":"4-hydroxyphenylpyruvate:oxygen oxidoreductase (decarboxylating)","type":"broad"}],"termid":"GO:0050585"}


id: FYPO:0006007
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the duration of localization of a protein to the site of cell division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:26941334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell division site","termid":"FYPO:0002442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal duration of protein localization to cell division site","synonyms":[{"name":"normal duration of protein localisation to cell division site","type":"exact"},{"name":"normal duration of protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"normal duration of protein localization to cell division site during vegetative growth","type":"exact"},{"name":"normal duration of protein recruitment to cell division site","type":"related"}],"termid":"FYPO:0006007"}


id: PBO:0068137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 444","termid":"PBO:0068137"}


id: PBO:0052168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 16","termid":"PBO:0052168"}


id: PBO:0081765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 696","termid":"PBO:0081765"}


id: GO:0030215
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a semaphorin receptor.","definition_xrefs":["GOC:ceb","PMID:12001990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"semaphorin receptor binding","synonyms":[{"name":"plexin binding","type":"narrow"},{"name":"plexin ligand","type":"narrow"},{"name":"semaphorin receptor ligand","type":"narrow"}],"termid":"GO:0030215"}


id: PBO:0031696
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_nuclear_import","termid":"PBO:0031696"}


id: PBO:0055752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA induced by HCV, regulator of SREBF1","termid":"PBO:0055752"}


id: PBO:0061224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein with MIF4G domain 1","termid":"PBO:0061224"}


id: SO:0001733
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 36th residue (a lysine), from the start of the H3 histone protein is methylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_methylation_site","termid":"SO:0001701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K36_methylation_site","synonyms":[{"name":"H3K36 methylation site","type":"exact"}],"termid":"SO:0001733"}


id: SO:0000155
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A self replicating, using the hosts cellular machinery, often circular nucleic acid molecule that is distinct from a chromosome in the organism.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replicon","termid":"SO:0001235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasmid","synonyms":[{"name":"plasmid sequence","type":"exact"}],"termid":"SO:0000155"}


id: GO:0048512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism that recurs with a regularity of approximately 24 hours.","definition_xrefs":["GOC:pr","GOC:go_curators","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhythmic behavior","termid":"GO:0007622"},{"relation_name":"is_a","term_name":"circadian rhythm","termid":"GO:0007623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian behavior","synonyms":[{"name":"circadian rhythm behavior","type":"exact"}],"termid":"GO:0048512"}


id: GO:0021948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a deep nuclear neuron from the rostrodorsal region of the cerebellar plate to their final more ventral position.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:jid","PMID:15157725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron migration","termid":"GO:0001764"},{"relation_name":"is_a","term_name":"cell migration in hindbrain","termid":"GO:0021535"},{"relation_name":"part_of","term_name":"deep nuclear neuron cell migration","termid":"GO:0021946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inward migration of deep nuclear neurons","termid":"GO:0021948"}


id: PBO:0085387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane high glucose sensor that regulates glucose transport; low affinity sesnor that contains 12 predicted transmembrane segments and a long C-terminal tail required for hexose transporter induction; phosphorylation of the tail by Yck1p/Yck2p facilitates binding to the HXT co-repressors, Mth1p and Std1p; RGT2 has a paralog, SNF3, that arose from the whole genome duplication","termid":"PBO:0085387"}


id: PBO:0000247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide 3-kinase family protein","termid":"PBO:0000247"}


id: PBO:0052663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 31","termid":"PBO:0052663"}


id: PBO:0114288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisome mebbrane ubiquitin conjugating enzyme E2 Ubc16 Pex4","termid":"PBO:0114288"}


id: SO:0001787
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes a change at the 5th base pair after the start of the intron in the orientation of the transcript.","definition_xrefs":["EBI:gr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_site_variant","termid":"SO:0001629"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_donor_5th_base_variant","synonyms":[{"name":"splice donor 5th base variant","type":"exact"}],"termid":"SO:0001787"}


id: PBO:0004136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Prp1","termid":"PBO:0004136"}


id: PBO:0085895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; localizes to membrane fraction; YCL049C is not an essential gene","termid":"PBO:0085895"}


id: GO:1904942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac ventricle formation.","definition_xrefs":["GOC:BHF_miRNA","GO_REF:0000058","GOC:BHF","GOC:TermGenie","PMID:23575307","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac chamber formation","termid":"GO:1901210"},{"relation_name":"regulates","term_name":"cardiac ventricle formation","termid":"GO:0003211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac ventricle formation","termid":"GO:1904942"}


id: GO:0048149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in the behavior of an organism as a result of an ethanol stimulus.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult behavior","termid":"GO:0030534"},{"relation_name":"part_of","term_name":"response to ethanol","termid":"GO:0045471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral response to ethanol","synonyms":[{"name":"behavioural response to ethanol","type":"exact"}],"termid":"GO:0048149"}


id: GO:0071475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, an increase in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperosmotic salinity response","termid":"GO:0042538"},{"relation_name":"is_a","term_name":"cellular response to salt stress","termid":"GO:0071472"},{"relation_name":"is_a","term_name":"cellular hyperosmotic response","termid":"GO:0071474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular hyperosmotic salinity response","synonyms":[{"name":"cellular response to hyperosmotic salt stress","type":"exact"}],"termid":"GO:0071475"}


id: PBO:0084381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low-affinity cyclic AMP phosphodiesterase; controls glucose and intracellular acidification-induced cAMP signaling, target of the cAMP-protein kinase A (PKA) pathway; glucose induces transcription and inhibits translation","termid":"PBO:0084381"}


id: PBO:0086039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in actin patch formation; null mutant displays a decreased number of actin cortical patches, increased coat patches, altered patch formation dynamics, and defects in endocytic internalization; interacts with GID complex components and computationally predicted to be involved in fructose-1,6-bisphosphatase (Fbp1p) degradation; non-essential gene","termid":"PBO:0086039"}


id: PBO:0081257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 26","termid":"PBO:0081257"}


id: GO:0002494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a lipid antigen into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:15928678","GOC:add","PMID:15928680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"part_of","term_name":"antigen processing and presentation of lipid antigen via MHC class Ib","termid":"GO:0048003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"lipid antigen transport","termid":"GO:0002494"}


id: PBO:0029953
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_secretion","termid":"PBO:0029953"}


id: GO:0039517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a virus effects a change in host protein serine/threonine phosphatase activity.","definition_xrefs":["GOC:bf","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host protein serine/threonine phosphatase activity (obsolete GO:0039517)","synonyms":[{"name":"modulation by virus of protein serine/threonine phosphatase activity in host","type":"exact"},{"name":"regulation by virus of host protein serine/threonine phosphatase activity","type":"exact"}],"termid":"GO:0039517"}


id: PBO:0030970
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_dimethylation_at_centromere_inner_repeat","termid":"PBO:0030970"}


id: GO:0006403
data:
  {"annotated_genes":["SJAG_03283","SJAG_01467","SJAG_03696","SJAG_00298","SJAG_04083","SJAG_00471","SJAG_04310","SJAG_03847","SJAG_04480","SJAG_03470","SJAG_01529","SJAG_00375","SJAG_03986","SJAG_02209","SJAG_01715","SJAG_01534","SJAG_04721","SJAG_04472","SJAG_04536","SJAG_04148","SJAG_03593","SJAG_02704","SJAG_01374","SJAG_02520","SJAG_02757","SJAG_04656","SJAG_01013","SJAG_04645","SJAG_04202","SJAG_01584","SJAG_02425","SJAG_00992","SJAG_02274","SJAG_03693","SJAG_04347","SJAG_00641","SJAG_00178","SJAG_02661","SJAG_04017","SJAG_03358","SJAG_03002","SJAG_01083","SJAG_05223","SJAG_04589","SJAG_03729","SJAG_00093","SJAG_01185","SJAG_04622","SJAG_01065","SJAG_00752","SJAG_04379","SJAG_05328","SJAG_03300","SJAG_01449","SJAG_04115","SJAG_03156","SJAG_03299","SJAG_02534","SJAG_01652"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008298"},{"annotations":[99061,85548,110959,97210,86666,85062,101430,113337,113466,100008,93165,111583],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006406"},{"annotations":[112496],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031990"},{"annotations":[57984,59219,63921],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051028"},{"annotations":[68984,102210,110523,112646,114087,97923,101791,112391,88239,98713,106482,107179,111584,111057,105910,98023,114993,104749,98810,93014,112128,107812,109313,97449,92599,100009,111871,112498,87004,103690],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016973"},{"annotations":[101105,91037,85073,92187,92571,90050,96476],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006405"},{"annotations":[98619],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006404"},{"annotations":[94010,113743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048254"},{"annotations":[101793,85414,108057,101321,109597],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006409"},{"annotations":[95599],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016031"},{"annotations":[109598],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071528"}]},"cv_name":"biological_process","definition":"A process in which RNA is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule localization","termid":"GO:0033036"}],"gene_count":59,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00375":null,"SJAG_00471":null,"SJAG_00641":null,"SJAG_00752":null,"SJAG_00992":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01467":null,"SJAG_01529":null,"SJAG_01534":null,"SJAG_01584":null,"SJAG_01652":null,"SJAG_01715":null,"SJAG_02209":null,"SJAG_02274":null,"SJAG_02425":null,"SJAG_02520":null,"SJAG_02534":null,"SJAG_02661":null,"SJAG_02704":null,"SJAG_02757":null,"SJAG_03002":null,"SJAG_03156":null,"SJAG_03283":null,"SJAG_03299":null,"SJAG_03300":null,"SJAG_03358":null,"SJAG_03470":null,"SJAG_03593":null,"SJAG_03693":null,"SJAG_03696":null,"SJAG_03729":null,"SJAG_03847":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04083":null,"SJAG_04115":null,"SJAG_04148":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04347":null,"SJAG_04379":null,"SJAG_04472":null,"SJAG_04480":null,"SJAG_04536":null,"SJAG_04589":null,"SJAG_04622":null,"SJAG_04645":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_05223":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"RNA localization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNA localisation","type":"exact"},{"name":"establishment and maintenance of RNA localization","type":"exact"}],"termid":"GO:0006403","terms_by_termid":{"GO:0006404":null,"GO:0006405":null,"GO:0006406":null,"GO:0006409":null,"GO:0008298":null,"GO:0016031":null,"GO:0016973":null,"GO:0031990":null,"GO:0048254":null,"GO:0051028":null,"GO:0071528":null}}


id: PBO:0039227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKT1 substrate 1","termid":"PBO:0039227"}


id: FYPO:0001257
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to the level of oxygen is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein level during cellular response to oxygen","synonyms":[{"name":"normal protein accumulation during cellular response to oxygen","type":"related"},{"name":"normal protein level during cellular response to oxygen during mitotic cell cycle","type":"related"},{"name":"normal protein level during cellular response to oxygen during vegetative growth","type":"exact"},{"name":"normal protein level during cellular response to oxygen levels","type":"exact"}],"termid":"FYPO:0001257"}


id: GO:0018272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-lysine to form N6-pyridoxal phosphate-L-lysine.","definition_xrefs":["RESID:AA0119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"is_a","term_name":"protein-pyridoxal-5-phosphate linkage","termid":"GO:0018352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-pyridoxal-5-phosphate linkage via peptidyl-N6-pyridoxal phosphate-L-lysine","termid":"GO:0018272"}


id: GO:0019550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutamate into other compounds, including aspartate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate metabolic process","termid":"GO:0006531"},{"relation_name":"is_a","term_name":"glutamate catabolic process","termid":"GO:0006538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520","GO:0044248"],"is_obsolete":false,"name":"glutamate catabolic process to aspartate","secondary_identifiers":["MetaCyc:GLUTDEG-PWY"],"synonyms":[{"name":"glutamate breakdown to aspartate","type":"exact"},{"name":"glutamate degradation to aspartate","type":"exact"}],"termid":"GO:0019550"}


id: GO:0071608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of macrophage inflammatory protein 1 alpha due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"macrophage inflammatory protein-1 alpha production","synonyms":[{"name":"CCL3 production","type":"exact"},{"name":"MIP-1a production","type":"exact"},{"name":"chemokine (C-C motif) ligand 3 production","type":"exact"},{"name":"macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071608"}


id: PBO:0051079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 7-27","termid":"PBO:0051079"}


id: PBO:0044418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYP2U1 and SGMS2 antisense RNA 1","termid":"PBO:0044418"}


id: FYPO:0006759
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromosome organization is abnormal during the meiotic cell cycle.","definition_xrefs":["PomBase:mah","GO:0070192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000641","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal meiotic chromosome organization","synonyms":[{"name":"abnormal chromosome organization during meiotic cell cycle","type":"exact"},{"name":"abnormal chromosome organization involved in meiotic cell cycle","type":"exact"},{"name":"abnormal meiotic chromosome organisation","type":"exact"}],"termid":"FYPO:0006759"}


id: GO:2000790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal cell proliferation involved in lung development.","definition_xrefs":["PMID:21513708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation","termid":"GO:0010464"},{"relation_name":"regulates","term_name":"mesenchymal cell proliferation involved in lung development","termid":"GO:0060916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell proliferation involved in lung development","termid":"GO:2000790"}


id: PBO:0060563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBL1, DAN family BMP antagonist","termid":"PBO:0060563"}


id: GO:2000714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of maintenance of meiotic sister chromatid cohesion along the chromosome arms.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of maintenance of meiotic sister chromatid cohesion, arms (obsolete GO:2000714)","synonyms":[{"name":"positive regulation of maintenance of meiotic sister chromatin cohesion along arms","type":"exact"},{"name":"positive regulation of maintenance of sister chromatin cohesion along arms at meiosis I","type":"exact"}],"termid":"GO:2000714"}


id: SO:0001404
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified proline amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_proline","secondary_identifiers":["MOD:00915"],"synonyms":[{"name":"ModPro","type":"exact"},{"name":"modified L proline","type":"exact"},{"name":"modified L-proline ","type":"exact"}],"termid":"SO:0001404"}


id: FYPO:0003914
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is higher than normal when the population in which the cell is found is in stationary phase. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level","termid":"FYPO:0000836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased protein level in stationary phase","synonyms":[{"name":"increased protein accumulation in stationary phase","type":"related"}],"termid":"FYPO:0003914"}


id: GO:0047402
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + protein alpha-D-glucosyl-1,2-beta-D-galactosyl-L-hydroxylysine = protein beta-D-galactosyl-L-hydroxylysine + beta-D-glucose. The enzyme specifically hydrolyzes glucose from alpha-D-glucosyl- (1->2)-beta-D-galactosyl disaccharide units that are linked to hydroxylysine residues of collagen and collagen-like proteins.","definition_xrefs":["MetaCyc:3.2.1.107-RXN","EC:3.2.1.107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosidase activity","termid":"GO:0015926"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0003674","GO:0140096","GO:0016787"],"is_obsolete":false,"name":"protein-glucosylgalactosylhydroxylysine glucosidase activity","secondary_identifiers":["RHEA:11068"],"synonyms":[{"name":"2-O-alpha-D-glucopyranosyl-5-O-alpha-D-galactopyranosylhydroxy-L-lysine glucohydrolase activity","type":"related"},{"name":"protein-alpha-D-glucosyl-1,2-beta-D-galactosyl-L-hydroxylysine glucohydrolase activity","type":"related"}],"termid":"GO:0047402"}


id: PR:000050484
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Ras GTPase-activating-like protein rng2 (Schizosaccharomyces pombe) that has been phosphorylated at the positions equivalent to Ser-199 and Ser-207 of the amino acid sequence represented by UniProtKB:O14188. Example: UniProtKB:O14188, Ser-199/Ser-207, MOD:00046.","definition_xrefs":["PMID:33131769","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ras GTPase-activating-like protein rng2 (Schizosaccharomyces pombe)","termid":"PR:000050483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rng2/Phos:(S199,S207)","pombase_gene_id":"SPAC4F8.13c","synonyms":[{"name":"PomBase_original_PRO_term_name: Ras GTPase-activating-like protein rng2 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rng2/Phos:1","type":"exact"},{"name":"UniProtKB:O14188, Ser-199/Ser-207, MOD:00046","type":"narrow"},{"name":"rng2/Phos:(S199,S207)","type":"exact"}],"termid":"PR:000050484"}


id: PBO:0069477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 744, pseudogene","termid":"PBO:0069477"}


id: GO:0016977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of beta-1,4-linkages between N-acetyl-D-glucosamine and D-glucosamine residues in a partly acetylated chitosan.","definition_xrefs":["EC:3.2.1.132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"chitosanase activity","secondary_identifiers":["MetaCyc:3.2.1.132-RXN"],"synonyms":[{"name":"chitosan N-acetylglucosaminohydrolase activity","type":"related"}],"termid":"GO:0016977"}


id: PBO:0090652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex NOT box subunit 3/5","termid":"PBO:0090652"}


id: GO:0032636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-7 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-7 production","secondary_identifiers":["GO:0072605","GO:0042227"],"synonyms":[{"name":"IL-7 production","type":"exact"},{"name":"interleukin-7 biosynthetic process","type":"narrow"},{"name":"interleukin-7 secretion","type":"narrow"}],"termid":"GO:0032636"}


id: MOD:01074
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a napthylacetyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"napthylacetyl modified residue","termid":"MOD:01074"}


id: PBO:0090224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGEF for Cdc42 (Gef1)","termid":"PBO:0090224"}


id: GO:0052040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont gene product alters or subverts host programmed cell death, leading to a change in the frequency, rate or extent of host programmed cell death in the host cell. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host programmed cell death","secondary_identifiers":["GO:0052152"],"synonyms":[{"name":"modulation by symbiont of host non-apoptotic programmed cell death","type":"narrow"},{"name":"modulation by symbiont of host programmed cell death","type":"exact"},{"name":"modulation of host PCD","type":"exact"}],"termid":"GO:0052040"}


id: GO:0030747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-pyruvate + S-adenosyl-L-methionine = (R)-3-(indol-3-yl)-2-oxobutanoate + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"indolepyruvate C-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-17530","RHEA:12112"],"synonyms":[{"name":"S-adenosyl-L-methionine:(indol-3-yl)pyruvate C-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:indolepyruvate C-methyltransferase activity","type":"related"},{"name":"indolepyruvate 3-methyltransferase activity","type":"related"},{"name":"indolepyruvate methyltransferase activity","type":"related"},{"name":"indolepyruvic acid methyltransferase activity","type":"related"}],"termid":"GO:0030747"}


id: PBO:0058636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6768","termid":"PBO:0058636"}


id: GO:0050065
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + pyruvate = L-alanine + L-allysine.","definition_xrefs":["EC:2.6.1.71","RHEA:19393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016769","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"lysine-pyruvate 6-transaminase activity","secondary_identifiers":["KEGG_REACTION:R00453","MetaCyc:LYSINE--PYRUVATE-6-AMINOTRANSFERASE-RXN","MetaCyc:PWY-5324"],"synonyms":[{"name":"L-lysine:pyruvate aminotransferase activity","type":"related"},{"name":"Lys-AT","type":"related"},{"name":"lysine--pyruvate 6-aminotransferase activity","type":"exact"},{"name":"lysine-pyruvate aminotransferase activity","type":"related"}],"termid":"GO:0050065"}


id: PR:O94274
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP8B7.26 gene.","definition_xrefs":["UniProtKB:O94274","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P8B7.26 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.26","synonyms":[{"name":"Spom972h-SPBP8B7.26","type":"exact"}],"termid":"PR:O94274"}


id: GO:0120215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of histidine biosynthetic process.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of histidine biosynthetic process","termid":"GO:0120213"},{"relation_name":"is_a","term_name":"positive regulation of amino acid biosynthetic process","termid":"GO:2000284"},{"relation_name":"positively_regulates","term_name":"L-histidine biosynthetic process","termid":"GO:0000105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"positive regulation of histidine biosynthetic process","synonyms":[{"name":"activation of histidine anabolism","type":"narrow"},{"name":"activation of histidine biosynthesis","type":"narrow"},{"name":"activation of histidine biosynthetic process","type":"narrow"},{"name":"activation of histidine formation","type":"narrow"},{"name":"activation of histidine synthesis","type":"narrow"},{"name":"positive regulation of histidine anabolism","type":"exact"},{"name":"positive regulation of histidine biosynthesis","type":"exact"},{"name":"positive regulation of histidine formation","type":"exact"},{"name":"positive regulation of histidine synthesis","type":"exact"},{"name":"up regulation of histidine anabolism","type":"exact"},{"name":"up regulation of histidine biosynthesis","type":"exact"},{"name":"up regulation of histidine biosynthetic process","type":"exact"},{"name":"up regulation of histidine formation","type":"exact"},{"name":"up regulation of histidine synthesis","type":"exact"},{"name":"up-regulation of histidine anabolism","type":"exact"},{"name":"up-regulation of histidine biosynthesis","type":"exact"},{"name":"up-regulation of histidine biosynthetic process","type":"exact"},{"name":"up-regulation of histidine formation","type":"exact"},{"name":"up-regulation of histidine synthesis","type":"exact"},{"name":"upregulation of histidine anabolism","type":"exact"},{"name":"upregulation of histidine biosynthesis","type":"exact"},{"name":"upregulation of histidine biosynthetic process","type":"exact"},{"name":"upregulation of histidine formation","type":"exact"},{"name":"upregulation of histidine synthesis","type":"exact"}],"termid":"GO:0120215"}


id: GO:0034116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of heterotypic cell-cell adhesion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"regulation of heterotypic cell-cell adhesion","termid":"GO:0034114"},{"relation_name":"positively_regulates","term_name":"heterotypic cell-cell adhesion","termid":"GO:0034113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of heterotypic cell-cell adhesion","termid":"GO:0034116"}


id: GO:0055114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.","definition_xrefs":["GOC:ecd","GOC:jh2","GOC:dhl","GOC:mlg","GOC:rph","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidation-reduction process (obsolete GO:0055114)","synonyms":[{"name":"oxidation reduction","type":"exact"},{"name":"oxidoreductase process","type":"exact"}],"termid":"GO:0055114"}


id: SO:0000283
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transposable_element that is engineered and foreign.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"has_quality","term_name":"foreign","termid":"SO:0000784"},{"relation_name":"is_a","term_name":"transposable_element_gene","termid":"SO:0000111"},{"relation_name":"is_a","term_name":"engineered_foreign_gene","termid":"SO:0000281"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_foreign_transposable_element_gene","synonyms":[{"name":"engineered foreign transposable element gene","type":"exact"}],"termid":"SO:0000283"}


id: PBO:0072838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP30BP antisense RNA 1","termid":"PBO:0072838"}


id: GO:0021575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the hindbrain is generated and organized. The hindbrain is the region consisting of the medulla, pons and cerebellum. Areas of the hindbrain control motor and autonomic functions.","definition_xrefs":["GOC:cls","ISBN:0838580343","GOC:dph","GOC:jid","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"hindbrain development","termid":"GO:0030902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hindbrain morphogenesis","synonyms":[{"name":"rhombencephalon morphogenesis","type":"related"}],"termid":"GO:0021575"}


id: GO:2000086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesenchymal to epithelial transition involved in mesonephros morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal to epithelial transition involved in mesonephros morphogenesis","termid":"GO:2000084"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000698"},{"relation_name":"positively_regulates","term_name":"mesenchymal to epithelial transition involved in mesonephros morphogenesis","termid":"GO:0061261"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal to epithelial transition involved in mesonephros morphogenesis","synonyms":[{"name":"positive regulation of mesonephric mesenchyme to epithelial transition","type":"related"}],"termid":"GO:2000086"}


id: PBO:0044733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 18 pseudogene 1","termid":"PBO:0044733"}


id: PBO:0068941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 184, pseudogene","termid":"PBO:0068941"}


id: GO:0033902
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the phosphodiester linkage between guanosine and adenosine residues at one specific position in 28S rRNA from rat ribosomes.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA nuclease activity","termid":"GO:0004540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787","GO:0140098"],"is_obsolete":false,"name":"rRNA endonuclease activity","secondary_identifiers":["EC:4.6.1.23","MetaCyc:3.1.27.10-RXN"],"synonyms":[{"name":"alpha-sarcin","type":"related"}],"termid":"GO:0033902"}


id: RO:0002446
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A biotic interaction relationship in which one partner is an organism and the other partner is inorganic. For example, the relationship between a sponge and the substrate to which is it anchored.","direct_ancestors":[{"relation_name":"is_a","term_name":"biotically_interacts_with","termid":"RO:0002437"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"participates_in_a_abiotic-biotic_interaction_with","synonyms":[{"name":"semibiotically interacts with","type":"related"}],"termid":"RO:0002446"}


id: GO:0052146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on or near its host organism towards a higher level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive energy taxis on or near host (obsolete GO:0052146)","termid":"GO:0052146"}


id: PBO:0067952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 254","termid":"PBO:0067952"}


id: PBO:0061473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor binding protein 2","termid":"PBO:0061473"}


id: PBO:0053354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 251","termid":"PBO:0053354"}


id: GO:2001270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cysteine-type endopeptidase activity involved in execution phase of apoptosis.","definition_xrefs":["GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cysteine-type endopeptidase activity involved in apoptotic process","termid":"GO:0043281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis","synonyms":[{"name":"regulation of effector caspase activity","type":"narrow"}],"termid":"GO:2001270"}


id: PBO:0038442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP2 associated kinase 1","termid":"PBO:0038442"}


id: PBO:0081375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF213 antisense RNA 1 (head to head)","termid":"PBO:0081375"}


id: PBO:0002272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine-rich repeat protein, unknown","termid":"PBO:0002272"}


id: GO:1990700
data:
  {"annotated_genes":["SJAG_03982","SJAG_01075","SJAG_00883","SJAG_03844","SJAG_02778","SJAG_00934","SJAG_01579"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110488,104217,103289,108169,109363,88120,100157],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000183"}]},"cv_name":"biological_process","definition":"Any process that results in the specification, formation or maintenance of the physical structure of nucleolar chromatin.","definition_xrefs":["PMID:18362178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin organization","termid":"GO:0006325"},{"relation_name":"part_of","term_name":"nucleolus organization","termid":"GO:0007000"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_00934":null,"SJAG_01075":null,"SJAG_01579":null,"SJAG_02778":null,"SJAG_03844":null,"SJAG_03982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0006325"],"is_obsolete":false,"name":"nucleolar chromatin organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment or maintenance of nucleolar chromatin architecture","type":"exact"},{"name":"nucleolar chromatin organisation","type":"exact"}],"termid":"GO:1990700","terms_by_termid":{"GO:0000183":null}}


id: GO:0098582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vocalisation behavior that is innate, i.e. that does not need to be learned in order to occur.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vocalization behavior","termid":"GO:0071625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"innate vocalization behavior","termid":"GO:0098582"}


id: PBO:0056145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M6PR pseudogene 1","termid":"PBO:0056145"}


id: PBO:0041382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5 open reading frame 15","termid":"PBO:0041382"}


id: GO:1901997
data:
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id: PBO:0043146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 14","termid":"PBO:0043146"}


id: PR:O43087
data:
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id: GO:0009056
data:
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id: PBO:0057227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 382","termid":"PBO:0057227"}


id: GO:0010904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of UDP-glucose catabolism. UDP-glucose catabolic processes are the chemical reactions and pathways resulting in the breakdown of UDP-glucose, uridinediphosphoglucose, a substance composed of glucose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"regulation of glucose metabolic process","termid":"GO:0010906"},{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of phosphorus metabolic process","termid":"GO:0051174"},{"relation_name":"regulates","term_name":"UDP-glucose catabolic process","termid":"GO:0006258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"regulation of UDP-glucose catabolic process","synonyms":[{"name":"regulation of UDP-glucose catabolism","type":"exact"}],"termid":"GO:0010904"}


id: PBO:0005111
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrin","termid":"PBO:0005111"}


id: PBO:0001944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap-binding complex large subunit (predicted)","termid":"PBO:0001944"}


id: GO:0097341
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that prevents the proteolytic processing of an inactive enzyme to an active form.","definition_xrefs":["PMID:20383739","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein processing","termid":"GO:0010955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"zymogen inhibition","synonyms":[{"name":"prevention of zymogen activation","type":"exact"}],"termid":"GO:0097341"}


id: GO:0075183
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organized mass of hyphae is formed and numerous infective hyphae develop from the hyphae mass.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of infection structure","termid":"GO:0075015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"infection cushion formation","synonyms":[{"name":"infection cushion formation on or near host","type":"exact"}],"termid":"GO:0075183"}


id: PBO:0026662
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_vegetative_cell_with_fragmented_DNA_during_cellular_response_to_ionizing_radiation","termid":"PBO:0026662"}


id: PR:Q10104
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine hydroxymethyltransferase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00915","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydroxymethyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.04c","secondary_identifiers":["UniProtKB:Q10104"],"synonyms":[{"name":"SHMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SHMT2","type":"exact"},{"name":"glycine hydroxymethyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"serine methylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10104"}


id: GO:0032621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-18 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-18 production","secondary_identifiers":["GO:0072616","GO:0042241"],"synonyms":[{"name":"IGIF production","type":"exact"},{"name":"IL-18 production","type":"exact"},{"name":"IL1F4 production","type":"narrow"},{"name":"interleukin-18 biosynthetic process","type":"narrow"},{"name":"interleukin-18 secretion","type":"narrow"}],"termid":"GO:0032621"}


id: PBO:0045052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in lymphocytic leukemia 1","termid":"PBO:0045052"}


id: PBO:0003235
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Diamond Blackfan Anemia","termid":"PBO:0003235"}


id: PBO:0069605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 882, pseudogene","termid":"PBO:0069605"}


id: PBO:0090758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-polyphosphate 5-phosphatase, synaptojanin homolog 2","termid":"PBO:0090758"}


id: PBO:0002810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-galactosyltransferase Gmh3","termid":"PBO:0002810"}


id: PBO:0060683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDRG family member 3","termid":"PBO:0060683"}


id: internal:systematic
data:
  {"annotation_feature_type":"gene","cv_name":"synonym_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systematic","termid":"internal:systematic"}


id: GO:0090091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of extracellular matrix disassembly. Extracellular matrix disassembly is a process that results in the breakdown of the extracellular matrix.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extracellular matrix disassembly","termid":"GO:0010715"},{"relation_name":"is_a","term_name":"positive regulation of extracellular matrix organization","termid":"GO:1903055"},{"relation_name":"positively_regulates","term_name":"extracellular matrix disassembly","termid":"GO:0022617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of extracellular matrix disassembly","termid":"GO:0090091"}


id: SO:0000883
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A stop codon redefined to be a new amino acid.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recoded_codon","termid":"SO:0000145"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stop_codon_read_through","synonyms":[{"name":"stop codon read through","type":"exact"},{"name":"stop codon readthrough","type":"related"}],"termid":"SO:0000883"}


id: PBO:0025452
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial complex III deficiency","termid":"PBO:0025452"}


id: PBO:0078423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 2-4","termid":"PBO:0078423"}


id: PBO:0066625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIC8 guanine nucleotide exchange factor B","termid":"PBO:0066625"}


id: PBO:0059600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 12","termid":"PBO:0059600"}


id: GO:0031319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate) stimulus is received by a cell and converted into a molecular signal; cAMP is the nucleotide cyclic AMP.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"response to cAMP","termid":"GO:0051591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of cAMP","synonyms":[{"name":"3',5'-cAMP detection","type":"exact"},{"name":"3',5'-cAMP sensing","type":"exact"},{"name":"cAMP detection","type":"exact"},{"name":"cAMP sensing","type":"exact"},{"name":"cyclic AMP detection","type":"exact"},{"name":"detection of 3',5' cAMP","type":"exact"},{"name":"detection of 3',5'-cAMP","type":"exact"},{"name":"detection of adenosine 3',5'-cyclophosphate","type":"exact"},{"name":"detection of cyclic AMP","type":"exact"}],"termid":"GO:0031319"}


id: GO:0047504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-menthol + NADP+ = (2S,5R)-menthone + H+ + NADPH.","definition_xrefs":["RHEA:13917","EC:1.1.1.207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(-)-menthol dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r1182","MetaCyc:--MENTHOL-DEHYDROGENASE-RXN","KEGG_REACTION:R02177"],"synonyms":[{"name":"(-)-menthol:NADP+ oxidoreductase activity","type":"related"},{"name":"monoterpenoid dehydrogenase activity","type":"broad"}],"termid":"GO:0047504"}


id: PBO:0031141
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-septation_following_abnormal_mitotic_chromosome_segregation","termid":"PBO:0031141"}


id: GO:0047989
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-3-[(R)-3-hydroxybutanoyloxy]butanoate + H2O = 2 (R)-3-hydroxybutanoate + H+.","definition_xrefs":["EC:3.1.1.22","RHEA:10172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"hydroxybutyrate-dimer hydrolase activity","secondary_identifiers":["KEGG_REACTION:R00048","MetaCyc:HYDROXYBUTYRATE-DIMER-HYDROLASE-RXN"],"synonyms":[{"name":"(R)-3-((R)-3-hydroxybutanoyloxy)butanoate hydroxybutanoylhydrolase activity","type":"related"},{"name":"D-(-)-3-hydroxybutyrate-dimer hydrolase activity","type":"related"}],"termid":"GO:0047989"}


id: GO:0016627
data:
  {"annotated_genes":["SJAG_02007","SJAG_01786","SJAG_04810","SJAG_01041","SJAG_01362","SJAG_01671","SJAG_00174","SJAG_02151","SJAG_04944","SJAG_03240","SJAG_03024","SJAG_04954","SJAG_04107","SJAG_00197","SJAG_02291","SJAG_00203","SJAG_03236","SJAG_02876","SJAG_04652","SJAG_00260","SJAG_02717"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96726,61005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003865"},{"annotations":[88899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004109"},{"annotations":[100516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050613"},{"annotations":[88592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000246"},{"annotations":[94561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106430"},{"annotations":[94562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004152"},{"annotations":[96804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004318"},{"annotations":[91068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141148"},{"annotations":[86232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016156"},{"annotations":[100743,105686,85524,114486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106414"},{"annotations":[97645,97644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016628"},{"annotations":[88390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004729"},{"annotations":[96070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102389"},{"annotations":[93860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043115"},{"annotations":[110875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008977"},{"annotations":[110876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004665"},{"annotations":[84886,85251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008177"},{"annotations":[107385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019166"},{"annotations":[105687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102262"},{"annotations":[105688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102263"},{"annotations":[100744],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102264"},{"annotations":[114487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102266"},{"annotations":[114488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102267"},{"annotations":[85525],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102265"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["EC:1.3.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00174":null,"SJAG_00197":null,"SJAG_00203":null,"SJAG_00260":null,"SJAG_01041":null,"SJAG_01362":null,"SJAG_01671":null,"SJAG_01786":null,"SJAG_02007":null,"SJAG_02151":null,"SJAG_02291":null,"SJAG_02717":null,"SJAG_02876":null,"SJAG_03024":null,"SJAG_03236":null,"SJAG_03240":null,"SJAG_04107":null,"SJAG_04652":null,"SJAG_04810":null,"SJAG_04944":null,"SJAG_04954":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-CH group of donors","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2995334","Reactome:R-HSA-9661710"],"synonyms":[{"name":"oxidoreductase activity, acting on the CH-CH group of donors, other acceptors","type":"narrow"}],"termid":"GO:0016627","terms_by_termid":{"GO:0000246":null,"GO:0003865":null,"GO:0004109":null,"GO:0004152":null,"GO:0004318":null,"GO:0004665":null,"GO:0004729":null,"GO:0008177":null,"GO:0008977":null,"GO:0016156":null,"GO:0016628":null,"GO:0019166":null,"GO:0043115":null,"GO:0050613":null,"GO:0102262":null,"GO:0102263":null,"GO:0102264":null,"GO:0102265":null,"GO:0102266":null,"GO:0102267":null,"GO:0102389":null,"GO:0106414":null,"GO:0106430":null,"GO:0141148":null}}


id: PBO:0088234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein","termid":"PBO:0088234"}


id: PBO:0080208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vestigial like family member 2","termid":"PBO:0080208"}


id: PBO:0083593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a protein, based on available experimental and comparative sequence data; YAR069C has a paralog, YHR214C-D, that arose from a segmental duplication","termid":"PBO:0083593"}


id: PBO:0015212
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(2)","termid":"PBO:0015212"}


id: GO:0007132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase, following prophase I, during which chromosomes become aligned on the equatorial plate of the cell as part of meiosis I.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle phase","termid":"GO:0098764"},{"relation_name":"part_of","term_name":"metaphase","termid":"GO:0051323"},{"relation_name":"part_of","term_name":"meiotic M phase","termid":"GO:0051327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051327"}],"interesting_parent_ids":["GO:0008150","GO:0051327"],"is_obsolete":false,"name":"meiotic metaphase I","termid":"GO:0007132"}


id: GO:0021878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into an astrocyte that resides in the forebrain.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","GOC:dgh","GOC:jid","PMID:16226447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocyte fate commitment","termid":"GO:0060018"},{"relation_name":"part_of","term_name":"forebrain astrocyte differentiation","termid":"GO:0021896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain astrocyte fate commitment","termid":"GO:0021878"}


id: GO:0021806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial stages of cell motility involved in the glial-mediated movement of cells in the developing cerebral cortex.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","GOC:cls","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"ameboidal-type cell migration","termid":"GO:0001667"},{"relation_name":"part_of","term_name":"cell motility involved in cerebral cortex radial glia guided migration","termid":"GO:0021814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"initiation of movement involved in cerebral cortex radial glia guided migration","synonyms":[{"name":"initiation of movement involved in cerebral cortex glial-mediated radial migration","type":"related"}],"termid":"GO:0021806"}


id: PBO:0055872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC2 pseudogene 1","termid":"PBO:0055872"}


id: PBO:0088488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein N-terminal amidase Nta1","termid":"PBO:0088488"}


id: PBO:0076702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 3 pseudogene 1","termid":"PBO:0076702"}


id: PBO:0017459
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-hyperparasite_of","termid":"PBO:0017459"}


id: PBO:0048675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLCCI1 divergent transcript","termid":"PBO:0048675"}


id: GO:0002577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"regulates","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation","termid":"GO:0002577"}


id: SO:0000844
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence which is a promoter for RNA polymerase II.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000844 RNApol_II_promoter_region (obsolete SO:0000844)","termid":"SO:0000844"}


id: GO:2000760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of N-terminal peptidyl-lysine acetylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein maturation","termid":"GO:1903318"},{"relation_name":"is_a","term_name":"negative regulation of peptidyl-lysine acetylation","termid":"GO:2000757"},{"relation_name":"is_a","term_name":"regulation of N-terminal peptidyl-lysine acetylation","termid":"GO:2000759"},{"relation_name":"negatively_regulates","term_name":"N-terminal peptidyl-lysine acetylation","termid":"GO:0018076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"negative regulation of N-terminal peptidyl-lysine acetylation","termid":"GO:2000760"}


id: PR:P36631
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor ste11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PomBase:MAH","PMID:11702950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor ste11","termid":"PR:000027538"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor ste11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32C12.02","secondary_identifiers":["PR:000027539","UniProtKB:P36631"],"synonyms":[{"name":"SPBC32C12.02","type":"related"},{"name":"Spom972h-ste11","type":"exact"}],"termid":"PR:P36631"}


id: PBO:0062148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 21","termid":"PBO:0062148"}


id: PBO:0051367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3D-7","termid":"PBO:0051367"}


id: PBO:0088298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Velum formation protein 1-like conserved fungal family","termid":"PBO:0088298"}


id: PBO:0058265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4643","termid":"PBO:0058265"}


id: GO:0016861
data:
  {"annotated_genes":["SJAG_02648","SJAG_01346","SJAG_03614","SJAG_04192","SJAG_01455","SJAG_00070","SJAG_00839"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003949"},{"annotations":[99710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004347"},{"annotations":[104443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004476"},{"annotations":[99569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004640"},{"annotations":[85004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004751"},{"annotations":[103060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046523"},{"annotations":[112431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004807"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which the hydrogen donor and acceptor, which is an aldose or a ketose, are the same molecule, and no oxidized product appears.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_00839":null,"SJAG_01346":null,"SJAG_01455":null,"SJAG_02648":null,"SJAG_03614":null,"SJAG_04192":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:5.3.1.-"],"synonyms":[{"name":"intramolecular isomerase activity, interconverting aldoses and ketoses","type":"exact"}],"termid":"GO:0016861","terms_by_termid":{"GO:0003949":null,"GO:0004347":null,"GO:0004476":null,"GO:0004640":null,"GO:0004751":null,"GO:0004807":null,"GO:0046523":null}}


id: PR:Q9HDV8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proline-rich protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P19A11.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP19A11.02c","secondary_identifiers":["UniProtKB:Q9HDV8"],"synonyms":[{"name":"Spom972h-PROL1","type":"exact"}],"termid":"PR:Q9HDV8"}


id: PBO:0062704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily F member 3 pseudogene","termid":"PBO:0062704"}


id: MOD:01620
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two cysteine residues by formation of a chain of three or more bonded sulfur atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"},{"relation_name":"is_a","term_name":"multisulfide crosslinked residues","termid":"MOD:01619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polysulfide crosslinked residues","termid":"MOD:01620"}


id: PBO:0052673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 41","termid":"PBO:0052673"}


id: PBO:0001039
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Atf1","termid":"PBO:0001039"}


id: FYPO:0007624
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitochondrial cytochrome c oxidase (respiratory chain complex IV) assembly is decreased.","definition_xrefs":["PomBase:mah","GO:0033617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitochondrial respiratory chain complex assembly","termid":"FYPO:0007122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased mitochondrial respiratory chain complex IV assembly","synonyms":[{"name":"decreased mitochondrial cytochrome c oxidase assembly","type":"exact"},{"name":"decreased mitochondrial respiratory chain complex IV assembly during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial respiratory chain complex IV assembly during vegetative growth","type":"exact"},{"name":"decreased respiratory chain complex IV assembly","type":"exact"}],"termid":"FYPO:0007624"}


id: PBO:0110268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II complex subunit Rpb3","termid":"PBO:0110268"}


id: PBO:0081766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 697","termid":"PBO:0081766"}


id: GO:0006228
data:
  {"annotated_genes":["SJAG_02887"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96134],"is_not":false,"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside triphosphate biosynthetic process","termid":"GO:0009209"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide biosynthetic process","termid":"GO:0009220"},{"relation_name":"is_a","term_name":"UTP metabolic process","termid":"GO:0046051"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"UTP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"UTP anabolism","type":"exact"},{"name":"UTP biosynthesis","type":"exact"},{"name":"UTP formation","type":"exact"},{"name":"UTP synthesis","type":"exact"}],"termid":"GO:0006228","terms_by_termid":{"GO:0006228":null}}


id: GO:0051150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of smooth muscle cell differentiation.","definition_xrefs":["CL:0000192","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle cell differentiation","termid":"GO:0051147"},{"relation_name":"regulates","term_name":"smooth muscle cell differentiation","termid":"GO:0051145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of smooth muscle cell differentiation","termid":"GO:0051150"}


id: PBO:0047897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(7)(p13)","termid":"PBO:0047897"}


id: PBO:0079772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UFM1 specific peptidase 2","termid":"PBO:0079772"}


id: PBO:0005585
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cerevisiae YBR194W","termid":"PBO:0005585"}


id: GO:0004467
data:
  {"annotated_genes":["SJAG_03471","SJAG_03909"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101648,109489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090432"},{"annotations":[101649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090434"},{"annotations":[101650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090433"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain fatty acid + ATP + CoA = a long-chain fatty acyl-CoA + AMP + diphosphate. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["RHEA:15421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid-CoA ligase activity","termid":"GO:0120515"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03471":null,"SJAG_03909":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"long-chain fatty acid-CoA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-159425","MetaCyc:PWY-5143","Reactome:R-HSA-193727","Reactome:R-HSA-193766","Reactome:R-HSA-548843","Reactome:R-HSA-2046098","Reactome:R-HSA-193743","MetaCyc:RXN-7904","Reactome:R-HSA-192137","GO:0003996","Reactome:R-HSA-193401","Reactome:R-HSA-201035","Reactome:R-HSA-9734535","Reactome:R-HSA-2046085","Reactome:R-HSA-193424","Reactome:R-HSA-5696004","Reactome:R-HSA-193711","Reactome:R-HSA-193407","EC:6.2.1.3"],"synonyms":[{"name":"LCFA synthetase activity","type":"related"},{"name":"acyl-CoA ligase activity","type":"related"},{"name":"acyl-CoA synthetase activity","type":"related"},{"name":"acyl-activating enzyme activity","type":"broad"},{"name":"fatty acid thiokinase (long-chain) activity","type":"related"},{"name":"lignoceroyl-CoA synthase activity","type":"related"},{"name":"long chain fatty acyl-CoA synthetase activity","type":"related"},{"name":"long-chain acyl CoA synthetase activity","type":"related"},{"name":"long-chain acyl-CoA synthetase activity","type":"exact"},{"name":"long-chain acyl-coenzyme A synthetase activity","type":"related"},{"name":"long-chain fatty acid activation","type":"related"},{"name":"long-chain fatty acyl coenzyme A synthetase activity","type":"related"},{"name":"long-chain-fatty-acid-CoA ligase activity","type":"exact"},{"name":"long-chain-fatty-acyl-CoA synthetase activity","type":"exact"},{"name":"pristanoyl-CoA synthetase","type":"narrow"},{"name":"stearoyl-CoA synthetase","type":"narrow"},{"name":"thiokinase","type":"related"}],"termid":"GO:0004467","terms_by_termid":{"GO:0090432":null,"GO:0090433":null,"GO:0090434":null}}


id: GO:0039570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host STAT2 (signal transducer and activator of transcription-2) activity by retaining STAT2 in the cytoplasm, so STAT2 is unable to translocate to the nucleus to activate transcription of its target genes.","definition_xrefs":["PMID:14557668"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host STAT2 activity by negative regulation of STAT protein import into nucleus (obsolete GO:0039570)","synonyms":[{"name":"cytoplasmic sequestering of STAT2","type":"exact"},{"name":"cytoplasmic sequestration of STAT2","type":"exact"}],"termid":"GO:0039570"}


id: GO:0071527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a semaphorin receptor (composed of a plexin and a neurophilin) binding to a semaphorin ligand that contributes to outflow tract morphogenesis.","definition_xrefs":["GOC:vk","GOC:BHF","GOC:mah","PMID:15239959"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway involved in heart development","termid":"GO:0061311"},{"relation_name":"is_a","term_name":"semaphorin-plexin signaling pathway","termid":"GO:0071526"},{"relation_name":"part_of","term_name":"outflow tract morphogenesis","termid":"GO:0003151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"semaphorin-plexin signaling pathway involved in outflow tract morphogenesis","synonyms":[{"name":"semaphorin-plexin signalling pathway involved in outflow tract morphogenesis","type":"exact"}],"termid":"GO:0071527"}


id: PBO:0069147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 398, pseudogene","termid":"PBO:0069147"}


id: PBO:0030486
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_lithium","termid":"PBO:0030486"}


id: GO:0085004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released by the other (symbiont) organism via the haustorium, a projection from a cell or tissue that penetrates the host's cell wall. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via secreted substance released from haustorium (obsolete GO:0085004)","termid":"GO:0085004"}


id: PBO:0051616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin like domain containing receptor 1","termid":"PBO:0051616"}


id: GO:0047609
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetylputrescine + H2O = acetate + putrescine.","definition_xrefs":["EC:3.5.1.62","RHEA:23412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0019213","GO:0003824"],"is_obsolete":false,"name":"acetylputrescine deacetylase activity","secondary_identifiers":["MetaCyc:ACETYLPUTRESCINE-DEACETYLASE-RXN","KEGG_REACTION:R01156"],"synonyms":[{"name":"N-acetylputrescine acetylhydrolase activity","type":"related"}],"termid":"GO:0047609"}


id: PBO:0076917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor AP-2 epsilon","termid":"PBO:0076917"}


id: GO:0009682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A response to non-pathogenic bacteria that confers broad spectrum systemic resistance to disease that does not depend upon salicylic acid signaling.","definition_xrefs":["PMID:23386685","PMID:10234273","PMID:15233292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to bacterium","termid":"GO:0042742"},{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induced systemic resistance","termid":"GO:0009682"}


id: GO:0006829
data:
  {"annotated_genes":["SJAG_03528","SJAG_00328","SJAG_00222","SJAG_02968","SJAG_01078","SJAG_04185","SJAG_01990","SJAG_01803"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140147"},{"annotations":[100239,109280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071578"},{"annotations":[89828,89827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140209"},{"annotations":[100376,86506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904257"},{"annotations":[100377,86507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062111"},{"annotations":[100378,97286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071577"}]},"cv_name":"biological_process","definition":"The directed movement of zinc (Zn II) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transport","termid":"GO:0000041"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00222":null,"SJAG_00328":null,"SJAG_01078":null,"SJAG_01803":null,"SJAG_01990":null,"SJAG_02968":null,"SJAG_03528":null,"SJAG_04185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"zinc ion transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"zinc II ion transport","type":"exact"},{"name":"zinc transport","type":"exact"}],"termid":"GO:0006829","terms_by_termid":{"GO:0062111":null,"GO:0071577":null,"GO:0071578":null,"GO:0140147":null,"GO:0140209":null,"GO:1904257":null}}


id: FYPO:0008135
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is decreased during G1/S ofinterphase.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle pole body during interphase","termid":"FYPO:0002821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization tomitotic spindle pole body during G1/S","termid":"FYPO:0008135"}


id: PBO:0073380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC14 and spectrin domain containing 1","termid":"PBO:0073380"}


id: GO:0009697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of salicylic acid (2-hydroxybenzoic acid), a derivative of benzoic acid.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salicylic acid metabolic process","termid":"GO:0009696"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"salicylic acid biosynthetic process","secondary_identifiers":["MetaCyc:PWY-981"],"synonyms":[{"name":"salicylate biosynthetic process","type":"exact"},{"name":"salicylic acid anabolism","type":"exact"},{"name":"salicylic acid biosynthesis","type":"exact"},{"name":"salicylic acid formation","type":"exact"},{"name":"salicylic acid synthesis","type":"exact"}],"termid":"GO:0009697"}


id: PBO:0071590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 7","termid":"PBO:0071590"}


id: PR:000044777
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proliferating cell nuclear antigen monoubiquitinated form in Schizosaccharomyces pombe. Example: UniProtKB:Q03392, Lys-164, PR:000044771.","definition_xrefs":["PomBase:MAH","PMID:16641370","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pcn1/Ubiq(K164)","termid":"PR:000044776"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pcn1/MonoUbiq(K164)","pombase_gene_id":"SPBC16D10.09","synonyms":[{"name":"PCNA monoubiquitinated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"PomBase_original_PRO_term_name: proliferating cell nuclear antigen monoubiquitinated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-PCNA/MonoUbiq+","type":"exact"},{"name":"monoubiquitinated PCNA (Schizosaccharomyces pombe)","type":"exact"},{"name":"pcn1/MonoUbiq(K164)","type":"exact"}],"termid":"PR:000044777"}


id: PBO:0041635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA1C intronic transcript 1","termid":"PBO:0041635"}


id: PBO:0108907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1191 pseudogene 1","termid":"PBO:0108907"}


id: PBO:0004053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cysteine desulfurase Nfs1 (predicted)","termid":"PBO:0004053"}


id: PBO:0077849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triosephosphate isomerase 1","termid":"PBO:0077849"}


id: GO:0070428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the nucleotide-binding oligomerization domain containing 1 (NOD1) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0070424"},{"relation_name":"regulates","term_name":"nucleotide-binding oligomerization domain containing 1 signaling pathway","termid":"GO:0070427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway","synonyms":[{"name":"regulation of NOD1 signaling pathway","type":"exact"},{"name":"regulation of nucleotide-binding oligomerization domain containing 1 signalling pathway","type":"exact"}],"termid":"GO:0070428"}


id: PBO:0031244
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_silencing_by_small_RNA","termid":"PBO:0031244"}


id: PBO:0073161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC62 homolog, preprotein translocation factor","termid":"PBO:0073161"}


id: PBO:0056038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"latent transforming growth factor beta binding protein 3","termid":"PBO:0056038"}


id: PBO:0091274
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.682994delC","termid":"PBO:0091274"}


id: GO:0061053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a somite from its initial formation to the mature structure. Somites are mesodermal clusters that are arranged segmentally along the anterior posterior axis of an embryo.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"embryo development","termid":"GO:0009790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somite development","termid":"GO:0061053"}


id: GO:0009320
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses phosphoribosylaminoimidazole carboxylase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase complex","termid":"GO:0009320"}


id: GO:0000387
data:
  {"annotated_genes":["SJAG_02915","SJAG_04497","SJAG_03983","SJAG_00414","SJAG_04898","SJAG_05195","SJAG_00278","SJAG_00643","SJAG_01217","SJAG_04529","SJAG_02843","SJAG_03214","SJAG_01547","SJAG_03070","SJAG_03894","SJAG_03469","SJAG_01301","SJAG_01870","SJAG_01761","SJAG_03279","SJAG_00147","SJAG_02304","SJAG_03323"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85538,87697,91245,91669,92041,92907,97361,98613,100602,101924,104594,105039,106121,106690,109346,111186],"is_not":false,"summary":null,"term":"GO:0000387"},{"annotations":[110453,101541,108311,94079,93470,102595,107770,98252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000244"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of one or more snRNA and multiple protein components to form a ribonucleoprotein complex that is involved in formation of the spliceosome.","definition_xrefs":["GOC:mah","ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"mRNA splicing, via spliceosome","termid":"GO:0000398"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00147":null,"SJAG_00278":null,"SJAG_00414":null,"SJAG_00643":null,"SJAG_01217":null,"SJAG_01301":null,"SJAG_01547":null,"SJAG_01761":null,"SJAG_01870":null,"SJAG_02304":null,"SJAG_02843":null,"SJAG_02915":null,"SJAG_03070":null,"SJAG_03214":null,"SJAG_03279":null,"SJAG_03323":null,"SJAG_03469":null,"SJAG_03894":null,"SJAG_03983":null,"SJAG_04497":null,"SJAG_04529":null,"SJAG_04898":null,"SJAG_05195":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0010467","GO:0044085","GO:0008150","GO:0065003","GO:0016071"],"is_obsolete":false,"name":"spliceosomal snRNP assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"spliceosomal snRNP biogenesis","type":"related"}],"termid":"GO:0000387","terms_by_termid":{"GO:0000244":null,"GO:0000387":null}}


id: PBO:0041606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CA15 pseudogene 3","termid":"PBO:0041606"}


id: PBO:0089001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein, HSR1-related","termid":"PBO:0089001"}


id: PBO:0039184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKAP13 antisense RNA 1","termid":"PBO:0039184"}


id: GO:0019858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cytosine, 4-amino-2-hydroxypyrimidine, a pyrimidine derivative that is one of the five main bases found in nucleic acids; it occurs widely in cytidine derivatives.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase metabolic process","termid":"GO:0006206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cytosine metabolic process","synonyms":[{"name":"cytosine metabolism","type":"exact"}],"termid":"GO:0019858"}


id: PBO:0082480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Carboxyl methyltransferase; methylates the C terminus of the protein phosphatase 2A catalytic subunit (Pph21p or Pph22p), which is important for complex formation with regulatory subunits; required for methionine to inhibit autophagy and promote growth","termid":"PBO:0082480"}


id: PBO:0030980
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_trimethylation_at_centromere_inner_repeat","termid":"PBO:0030980"}


id: PR:O94602
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC622.15c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C622.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.15c","synonyms":[{"name":"Spom972h-SPCC622.15c","type":"exact"}],"termid":"PR:O94602"}


id: GO:0031066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the removal of acetyl groups from histones in centromeric DNA.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone deacetylation at centromere (obsolete GO:0031066)","termid":"GO:0031066"}


id: GO:0001678
data:
  {"annotated_genes":["SJAG_04334","SJAG_04026","SJAG_01699","SJAG_00574","SJAG_00472","SJAG_01754","SJAG_02444","SJAG_04312","SJAG_03081","SJAG_01254","SJAG_04495"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90586,94060],"is_not":false,"summary":null,"term":"GO:0001678"},{"annotations":[105569,102539,90287,111601,97906,105066,101948,102893,112641],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of glucose within a cell.","definition_xrefs":["GOC:go_curators","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose homeostasis","termid":"GO:0042593"},{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00574":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null,"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular glucose homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell glucose homeostasis","type":"exact"},{"name":"cellular glucose homeostasis","type":"exact"}],"termid":"GO:0001678","terms_by_termid":{"GO:0001678":null,"GO:0010619":null}}


id: PBO:0054001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1326","termid":"PBO:0054001"}


id: GO:0034548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-cyclopropylammeline + H2O = N-cyclopropylammelide + NH3.","definition_xrefs":["UM-BBD_reactionID:r0826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"N-cyclopropylammeline deaminase activity","secondary_identifiers":["MetaCyc:RXN-8019"],"termid":"GO:0034548"}


id: PBO:0078034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 24","termid":"PBO:0078034"}


id: PR:O13687
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vma4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit E (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.07","synonyms":[{"name":"Spom972h-vma4","type":"exact"},{"name":"V-ATPase subunit E (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit E (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13687"}


id: PBO:0027584
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_ferrozine","termid":"PBO:0027584"}


id: PBO:0086272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with 2-aminoadipate transaminase activity; shares amino acid similarity with the aminotransferases Aro8p and Aro9p; YER152C is not an essential gene","termid":"PBO:0086272"}


id: PR:Q10344
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translationally-controlled tumor protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11991:SF0","OMA:SCHPO01574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translationally-controlled tumor protein homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F12.02c","secondary_identifiers":["UniProtKB:Q10344"],"synonyms":[{"name":"Spom972h-TPT1","type":"exact"},{"name":"TCTP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"p23fyp (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10344"}


id: GO:1903687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of border follicle cell migration.","definition_xrefs":["GO_REF:0000058","GOC:als","PMID:18394891","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell migration","termid":"GO:0010633"},{"relation_name":"is_a","term_name":"regulation of border follicle cell migration","termid":"GO:1903684"},{"relation_name":"negatively_regulates","term_name":"border follicle cell migration","termid":"GO:0007298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of border follicle cell migration","synonyms":[{"name":"inhibition of border follicle cell migration","type":"narrow"}],"termid":"GO:1903687"}


id: PBO:0063239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 4","termid":"PBO:0063239"}


id: PATO:0000089
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000089 relative disease sensitivity (obsolete PATO:0000089)","termid":"PATO:0000089"}


id: PBO:0028318
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_mitochondrial_fission_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0028318"}


id: RO:0001023
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a condition (a phenotype or disease) of a host and a material entity, in which the material entity is part of the host itself, and the condition results in pathological processes that include an abnormally strong immune response against the material entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"causes_or_contributes_to_condition","termid":"RO:0003302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_autoimmune_trigger","termid":"RO:0001023"}


id: FYPO:0001671
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of GDP binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal GDP binding","termid":"FYPO:0001670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased GDP binding","synonyms":[{"name":"reduced GDP binding","type":"exact"}],"termid":"FYPO:0001671"}


id: PBO:0042075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 144B, pseudogene","termid":"PBO:0042075"}


id: GO:0110160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the cell cycle process in which the distance is lengthened between poles of the mitotic spindle during mitotic prophase (spindle phase one).","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic spindle formation (spindle phase one)","termid":"GO:0110159"},{"relation_name":"is_a","term_name":"negative regulation of spindle assembly","termid":"GO:1905831"},{"relation_name":"negatively_regulates","term_name":"mitotic spindle formation (spindle phase one)","termid":"GO:0061804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"negatively_regulates","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0007049","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"negative regulation of mitotic spindle formation (spindle phase one)","termid":"GO:0110160"}


id: PBO:0003016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 protein family 5","termid":"PBO:0003016"}


id: GO:0002522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a leukocyte within or between different tissues and organs of the body as part of an immune response.","definition_xrefs":["PMID:7507411","PMID:14708592","PMID:14680625","PMID:8600538","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"is_a","term_name":"leukocyte migration","termid":"GO:0050900"},{"relation_name":"part_of","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte migration involved in immune response","synonyms":[{"name":"immune cell migration during immune response","type":"exact"},{"name":"immune cell trafficking during immune response","type":"exact"},{"name":"leucocyte migration during immune response","type":"exact"},{"name":"leucocyte trafficking during immune response","type":"exact"},{"name":"leukocyte trafficking during immune response","type":"exact"}],"termid":"GO:0002522"}


id: PBO:0002408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase family A22","termid":"PBO:0002408"}


id: GO:0046713
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140159"},{"annotations":[57304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035445"}]},"cv_name":"biological_process","definition":"The directed movement of borate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Borate is the anion (BO3)3-; boron is a group 13 element, with properties which are borderline between metals and non-metals.","definition_xrefs":["PMID:21710975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"borate transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"boron transport","type":"related"}],"termid":"GO:0046713","terms_by_termid":{"GO:0035445":null,"GO:0140159":null}}


id: GO:1990350
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex facilitating glucose transport into, out of or within a cell, or between cells.","definition_xrefs":["GOC:bhm","PMID:15449578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"glucose transporter complex","termid":"GO:1990350"}


id: PBO:0002295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-glucoside transporter Sut1","termid":"PBO:0002295"}


id: PBO:0068188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 495","termid":"PBO:0068188"}


id: PBO:0034224
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_plesiomorphy_relationship_with","termid":"PBO:0034224"}


id: PBO:0081819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 12, Y-linked","termid":"PBO:0081819"}


id: PBO:0045919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EFCAB13 divergent transcript","termid":"PBO:0045919"}


id: GO:2000168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of planar cell polarity pathway involved in neural tube closure.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of planar cell polarity pathway involved in neural tube closure (obsolete GO:2000168)","termid":"GO:2000168"}


id: GO:1990625
data:
  {"annotated_genes":["SJAG_03869","SJAG_00690","SJAG_00169","SJAG_00786","SJAG_01942","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88561,88862,90425,95393,105725,111685],"is_not":false,"summary":null,"term":"GO:1990625"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of cytoplasmic translation initiation as a result of a stimulus indicating the organism is under stress.","definition_xrefs":["PMID:12242291","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation in response to stress","termid":"GO:0032055"},{"relation_name":"is_a","term_name":"negative regulation of translational initiation in response to stress","termid":"GO:0032057"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic translational initiation","termid":"GO:1904689"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational initiation in response to stress","termid":"GO:1990611"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02592":null,"SJAG_03869":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0002181"],"is_obsolete":false,"name":"negative regulation of cytoplasmic translational initiation in response to stress","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990625","terms_by_termid":{"GO:1990625":null}}


id: PR:O13811
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdi2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide-isomerase C17H9.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.14c","synonyms":[{"name":"Spom972h-pdi2","type":"exact"}],"termid":"PR:O13811"}


id: GO:1904583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a polyamine macromolecule stimulus.","definition_xrefs":["PMID:20805360","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to polyamine macromolecule","synonyms":[{"name":"response to polyamine","type":"exact"},{"name":"response to polyamines","type":"exact"}],"termid":"GO:1904583"}


id: GO:0007571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A developmental process that arises as the cell progresses toward the end of its lifespan and cause changes cellular metabolism, resulting in a decline in cell function; for example, one aspect of general metabolic decline is a decrease in the efficiency of protein synthesis.","definition_xrefs":["PMID:9891807","GOC:jh","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent general metabolic decline (obsolete GO:0007571)","synonyms":[{"name":"age-dependent decreased translational activity","type":"narrow"},{"name":"age-dependent increased protein content","type":"narrow"},{"name":"age-dependent yeast cell size increase","type":"related"},{"name":"nucleolar size increase","type":"narrow"}],"termid":"GO:0007571"}


id: PBO:0079305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 2B","termid":"PBO:0079305"}


id: PBO:0060114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 15","termid":"PBO:0060114"}


id: GO:0022870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + mannose(out) = protein histidine + mannose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"mannose transmembrane transporter activity","termid":"GO:0015578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-mannose phosphotransferase system transporter activity","synonyms":[{"name":"mannose PTS transporter activity","type":"exact"}],"termid":"GO:0022870"}


id: PBO:0090044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Imp4","termid":"PBO:0090044"}


id: GO:0042134
data:
  {"annotated_genes":["SJAG_03252","SJAG_02530","SJAG_03952","SJAG_04492","SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87565,92565,94043,102710,109976],"is_not":false,"summary":null,"term":"GO:0042134"}]},"cv_name":"molecular_function","definition":"Binding to an unprocessed ribosomal RNA transcript.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA binding","termid":"GO:0019843"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02530":null,"SJAG_02723":null,"SJAG_03252":null,"SJAG_03952":null,"SJAG_04492":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"rRNA primary transcript binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pre-rRNA binding","type":"exact"}],"termid":"GO:0042134","terms_by_termid":{"GO:0042134":null}}


id: PBO:0068168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 475","termid":"PBO:0068168"}


id: GO:0047902
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formyl-L-aspartate + H2O = formate + L-aspartate.","definition_xrefs":["EC:3.5.1.8","MetaCyc:FORMYLASPARTATE-DEFORMYLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"formylaspartate deformylase activity","secondary_identifiers":["RHEA:22040"],"synonyms":[{"name":"N-formyl-L-aspartate amidohydrolase activity","type":"related"},{"name":"formylaspartic formylase (formylase I, formylase II)","type":"related"}],"termid":"GO:0047902"}


id: PBO:0005601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-ubiquinone reductase complex subunit (predicted)","termid":"PBO:0005601"}


id: PBO:0071395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 1","termid":"PBO:0071395"}


id: PBO:0039559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 52","termid":"PBO:0039559"}


id: PBO:0004116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfide-quinone oxidoreductase","termid":"PBO:0004116"}


id: PR:Q9P783
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glutamate-rich WD repeat-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03150","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly protein rrb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.07","secondary_identifiers":["UniProtKB:Q9P783"],"synonyms":[{"name":"Spom972h-GRWD1","type":"exact"}],"termid":"PR:Q9P783"}


id: GO:0052531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of fluxes of calcium ions that occur as part of the defense response of a host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont calcium ion flux (obsolete GO:0052531)","synonyms":[{"name":"positive regulation by organism of defense-related symbiont Ca2+ flux","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont calcium ion flux","type":"exact"}],"termid":"GO:0052531"}


id: GO:0046402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the O side chain of a lipopolysaccharide, which determines the antigenic specificity of the organism. It is made up of about 50 repeating units of a branched tetrasaccharide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"O antigen metabolic process","synonyms":[{"name":"O antigen metabolism","type":"exact"}],"termid":"GO:0046402"}


id: PBO:0028881
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K36_methylation","termid":"PBO:0028881"}


id: PBO:0086924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pyrimidine nucleotidase; responsible for production of nicotinamide riboside and nicotinic acid riboside; overexpression suppresses the 6-AU sensitivity of transcription elongation factor S-II, as well as resistance to other pyrimidine derivatives; SDT1 has a paralog, PHM8, that arose from the whole genome duplication","termid":"PBO:0086924"}


id: PBO:0003203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate acyltransferase (predicted)","termid":"PBO:0003203"}


id: PBO:0071680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 12","termid":"PBO:0071680"}


id: PBO:0070177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 92 pseudogene","termid":"PBO:0070177"}


id: GO:0097714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a viscosity stimulus.","definition_xrefs":["PMID:7061416","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to viscosity","termid":"GO:0097714"}


id: PBO:0111844
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb family","termid":"PBO:0111844"}


id: GO:0047866
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N,N-dimethylglycine + H2O + O2 = formaldehyde + H2O2 + sarcosine.","definition_xrefs":["RHEA:17077","EC:1.5.3.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"dimethylglycine oxidase activity","secondary_identifiers":["MetaCyc:DIMETHYLGLYCINE-OXIDASE-RXN","KEGG_REACTION:R01564"],"synonyms":[{"name":"N,N-dimethylglycine:oxygen oxidoreductase (demethylating)","type":"related"}],"termid":"GO:0047866"}


id: PBO:0075716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serglycin","termid":"PBO:0075716"}


id: PBO:0091272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4210 domain protein, human FAM214A ortholog, implicated in chromosome segregation","termid":"PBO:0091272"}


id: PBO:0064860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 16A","termid":"PBO:0064860"}


id: GO:0030692
data:
  {"annotated_genes":["SJAG_00838","SJAG_03654"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99712,106148],"is_not":false,"summary":null,"term":"GO:0030692"}]},"cv_name":"cellular_component","definition":"A heterodimer associated with precursors of the eukaryotic small ribosomal subunit, including the 90S preribosome; involved in small subunit biogenesis.","definition_xrefs":["PMID:12446671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Noc complex","termid":"GO:0030689"},{"relation_name":"part_of","term_name":"90S preribosome","termid":"GO:0030686"},{"relation_name":"part_of","term_name":"preribosome, small subunit precursor","termid":"GO:0030688"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00838":null,"SJAG_03654":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0030684"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0030684","GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"Noc4p-Nop14p complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Nop7 complex","type":"exact"},{"name":"Nop7 subcomplex","type":"exact"}],"termid":"GO:0030692","terms_by_termid":{"GO:0030692":null}}


id: GO:0030425
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A neuron projection that has a short, tapering, morphology. Dendrites receive and integrate signals from other neurons or from sensory stimuli, and conduct nerve impulses towards the axon or the cell body. In most neurons, the impulse is conveyed from dendrites to axon via the cell body, but in some types of unipolar neuron, the impulse does not travel via the cell body.","definition_xrefs":["GOC:aruk","GOC:bc","GOC:mah","ISBN:0198506732","GOC:dos","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"},{"relation_name":"part_of","term_name":"dendritic tree","termid":"GO:0097447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendrite","secondary_identifiers":["NIF_Subcellular:sao1211023249","Wikipedia:Dendrite"],"termid":"GO:0030425"}


id: GO:0001055
data:
  {"annotated_genes":["SJAG_02101","SJAG_04261","SJAG_01765","SJAG_02070","SJAG_02506","SJAG_04894","SJAG_01313","SJAG_01713","SJAG_04030"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88085,89973,90160,92881,99407,101844,103758,109873,110737],"is_not":false,"summary":null,"term":"GO:0001055"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains an RNA polymerase II specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed 5'-3' RNA polymerase activity","termid":"GO:0003899"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01313":null,"SJAG_01713":null,"SJAG_01765":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02506":null,"SJAG_04030":null,"SJAG_04261":null,"SJAG_04894":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0140098","GO:0016779"],"is_obsolete":false,"name":"RNA polymerase II activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6814559","Reactome:R-HSA-6814549"],"synonyms":[{"name":"DNA-directed RNA polymerase activity involved in transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0001055","terms_by_termid":{"GO:0001055":null}}


id: PBO:0003541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein Nog1 (predicted)","termid":"PBO:0003541"}


id: PBO:0086865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative serine/threonine protein kinase; implicated in the regulation of phospholipid asymmetry through the activation of phospholipid translocases (flippases); involved in the phosphorylation of upstream inhibitory kinase Ypk1p along with Fpk1p; has a redundant role in the cellular response to mating pheromone; KIN82 has a paralog, FPK1, that arose from the whole genome duplication","termid":"PBO:0086865"}


id: PBO:0047590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGGY carbohydrate kinase domain containing","termid":"PBO:0047590"}


id: PBO:0072302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 21","termid":"PBO:0072302"}


id: GO:1900790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pseurotin A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactam biosynthetic process","termid":"GO:0072339"},{"relation_name":"is_a","term_name":"pseurotin A metabolic process","termid":"GO:1900788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pseurotin A biosynthetic process","synonyms":[{"name":"pseurotin A biosynthesis","type":"exact"},{"name":"pseurotin A formation","type":"exact"},{"name":"pseurotin A synthesis","type":"exact"},{"name":"Pseurotin anabolism","type":"related"},{"name":"Pseurotin biosynthesis","type":"related"},{"name":"Pseurotin biosynthetic process","type":"related"},{"name":"Pseurotin formation","type":"related"},{"name":"Pseurotin synthesis","type":"related"},{"name":"pseurotin A anabolism","type":"exact"}],"termid":"GO:1900790"}


id: PBO:0017095
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Extender of Chronological Lifespan","termid":"PBO:0017095"}


id: PR:O94584
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pps1 gene.","definition_xrefs":["UniProtKB:O94584","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDP-diacylglycerol--serine O-phosphatidyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.12","synonyms":[{"name":"Spom972h-pps1","type":"exact"},{"name":"phosphatidylserine synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94584"}


id: PBO:0091606
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human SHFM1","termid":"PBO:0091606"}


id: PBO:0043546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL1A2 antisense RNA 1","termid":"PBO:0043546"}


id: PBO:0043658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q3, methyltransferase","termid":"PBO:0043658"}


id: GO:1900841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of helvolic acid biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid biosynthetic process","termid":"GO:0010894"},{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of helvolic acid biosynthetic process","termid":"GO:1900840"},{"relation_name":"negatively_regulates","term_name":"helvolic acid biosynthetic process","termid":"GO:1900812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"negative regulation of helvolic acid biosynthetic process","synonyms":[{"name":"down regulation of helvolic acid biosynthetic process","type":"exact"},{"name":"down-regulation of helvolic acid biosynthetic process","type":"exact"},{"name":"downregulation of helvolic acid biosynthetic process","type":"exact"}],"termid":"GO:1900841"}


id: FYPO:0002657
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the switch from the monopolar to bipolar mode of cell growth (new end take-off; NETO) occurs to the same extent as in wild-type cells.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal NETO","termid":"FYPO:0001396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal occurrence of NETO","synonyms":[{"name":"normal NETO frequency","type":"exact"},{"name":"normal NETO occurrence","type":"exact"},{"name":"normal frequency of NETO","type":"exact"},{"name":"normal occurrence of NETO during mitotic cell cycle","type":"related"},{"name":"normal occurrence of NETO during vegetative growth","type":"exact"},{"name":"normal occurrence of activation of bipolar cell growth","type":"related"},{"name":"normal occurrence of cell growth mode switching, monopolar to bipolar","type":"exact"},{"name":"normal occurrence of new end take-off","type":"exact"},{"name":"normal occurrence of switch from monopolar to bipolar cell growth","type":"exact"}],"termid":"FYPO:0002657"}


id: PBO:0080973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 8 opposite strand pseudogene 2","termid":"PBO:0080973"}


id: PBO:0080665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 10B","termid":"PBO:0080665"}


id: PBO:0001322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase, meiotic Pit1","termid":"PBO:0001322"}


id: PBO:0110231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rixosome complex WD repeat subunit Crb3","termid":"PBO:0110231"}


id: PBO:0000039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"comment","termid":"PBO:0000039"}


id: GO:0045476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a nurse cell. During late oogenesis, following the transfer of substances from the nurse cells to the oocyte, nurse cell remnants are cleared from the egg chamber by apoptotic process.","definition_xrefs":["PMID:11973306","CL:0000026","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"programmed cell death involved in cell development","termid":"GO:0010623"},{"relation_name":"is_a","term_name":"apoptotic process involved in development","termid":"GO:1902742"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nurse cell apoptotic process","synonyms":[{"name":"apoptosis of nurse cells","type":"exact"},{"name":"invertebrate nurse cell apoptosis","type":"narrow"},{"name":"nurse cell apoptosis","type":"narrow"},{"name":"nurse cell programmed cell death by apoptosis","type":"exact"},{"name":"programmed cell death of nurse cells by apoptosis","type":"exact"}],"termid":"GO:0045476"}


id: PBO:0086913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative Y' element ATP-dependent helicase; YLL066C is not an essential gene","termid":"PBO:0086913"}


id: MOD:01884
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a 4-aminobutyl group, usually derived from spermidine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylated residue","termid":"MOD:00001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-aminobutylated residue","termid":"MOD:01884"}


id: PBO:0082011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZSWIM8 antisense RNA 1","termid":"PBO:0082011"}


id: PBO:0047238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 230 member J","termid":"PBO:0047238"}


id: PBO:0081380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 221","termid":"PBO:0081380"}


id: PBO:0057437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 554","termid":"PBO:0057437"}


id: GO:1904459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of substance P secretion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11278900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"is_a","term_name":"regulation of substance P secretion","termid":"GO:1904458"},{"relation_name":"negatively_regulates","term_name":"substance P secretion","termid":"GO:1990772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"negative regulation of substance P secretion","synonyms":[{"name":"down regulation of substance P secretion","type":"exact"},{"name":"down-regulation of substance P secretion","type":"exact"},{"name":"downregulation of substance P secretion","type":"exact"},{"name":"inhibition of substance P secretion","type":"narrow"}],"termid":"GO:1904459"}


id: PBO:0072127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 4","termid":"PBO:0072127"}


id: MOD:00636
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to S-ethylcysteine.","definition_xrefs":["Unimod:327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-ethylcysteine (Ser)","synonyms":[{"name":"Delta:H(4)C(2)O(-1)S(1)","type":"related"},{"name":"S-Ethylcystine from Serine","type":"related"}],"termid":"MOD:00636"}


id: PBO:0014610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulphate transmembrane transporter (predicted)","termid":"PBO:0014610"}


id: PBO:0062436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 100 pseudogene","termid":"PBO:0062436"}


id: PBO:0114113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1C complex WD repeat subunit Swd2.1","termid":"PBO:0114113"}


id: PBO:0062348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily L member 1 pseudogene","termid":"PBO:0062348"}


id: PBO:0005464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine kinase (predicted)","termid":"PBO:0005464"}


id: PBO:0030187
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_cell_at_low_temperature","termid":"PBO:0030187"}


id: GO:0046912
data:
  {"annotated_genes":["SJAG_04499","SJAG_04688","SJAG_01922","SJAG_02841"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003852"},{"annotations":[95524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004108"},{"annotations":[97988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004410"},{"annotations":[94104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004421"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor), with the acyl group being converted into alkyl on transfer.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity","termid":"GO:0016746"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01922":null,"SJAG_02841":null,"SJAG_04499":null,"SJAG_04688":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acyltransferase activity, acyl groups converted into alkyl on transfer","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.3.3.-"],"synonyms":[{"name":"acyltransferase, acyl groups converted into alkyl on transfer","type":"exact"},{"name":"transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer","type":"exact"}],"termid":"GO:0046912","terms_by_termid":{"GO:0003852":null,"GO:0004108":null,"GO:0004410":null,"GO:0004421":null}}


id: PBO:0068261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 45S pre-ribosomal N3","termid":"PBO:0068261"}


id: PBO:0043080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor nicotinic alpha 10 subunit","termid":"PBO:0043080"}


id: PBO:0055923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A11, pseudogene","termid":"PBO:0055923"}


id: PBO:0085833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery; msc3 mutants are defective in directing meiotic recombination events to homologous chromatids; potential Cdc28p substrate; protein abundance increases in response to DNA replication stress","termid":"PBO:0085833"}


id: PBO:0056622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 4","termid":"PBO:0056622"}


id: GO:0062002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency or rate of all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity.","definition_xrefs":["PMID:23407971"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity","termid":"GO:0062002"}


id: PBO:0083429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YCL045C","termid":"PBO:0083429"}


id: GO:0045937
data:
  {"annotated_genes":["SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving phosphates.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phosphorus metabolic process","termid":"GO:0010562"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"positively_regulates","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00685":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of phosphate metabolic process","type":"narrow"},{"name":"positive regulation of phosphate metabolism","type":"exact"},{"name":"stimulation of phosphate metabolic process","type":"narrow"},{"name":"up regulation of phosphate metabolic process","type":"exact"},{"name":"up-regulation of phosphate metabolic process","type":"exact"},{"name":"upregulation of phosphate metabolic process","type":"exact"}],"termid":"GO:0045937","terms_by_termid":{"GO:1905857":null}}


id: GO:0048320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the axial mesoderm. This process pertains to the initial formation of the structure from unspecified parts.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm formation","termid":"GO:0001707"},{"relation_name":"part_of","term_name":"axial mesoderm morphogenesis","termid":"GO:0048319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axial mesoderm formation","termid":"GO:0048320"}


id: GO:0018596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dimethylsilanediol + O2 + 2 H+ + 2 e- = H2O + hydroxymethylmethylsilanediol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dimethylsilanediol hydroxylase activity (obsolete GO:0018596)","synonyms":[{"name":"DMSD hydroxylase activity","type":"exact"}],"termid":"GO:0018596"}


id: PBO:0047259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 242 member B","termid":"PBO:0047259"}


id: GO:1901763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of oxytetracycline.","definition_xrefs":["UniPathway:UPA00926","GOC:TermGenie","GOC:yaf","PMID:8163168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"oxytetracycline metabolic process","termid":"GO:1901761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"oxytetracycline biosynthetic process","synonyms":[{"name":"oxytetracycline anabolism","type":"exact"},{"name":"oxytetracycline biosynthesis","type":"exact"},{"name":"oxytetracycline formation","type":"exact"},{"name":"oxytetracycline synthesis","type":"exact"}],"termid":"GO:1901763"}


id: GO:1904814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to chromosome, telomeric region.","definition_xrefs":["GOC:BHF","GOC:nc","PMID:19487455","GOC:BHF_telomere","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to chromosome, telomeric region","termid":"GO:0070198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to chromosome, telomeric region","synonyms":[{"name":"regulation of protein localisation to chromosome, telomeric region","type":"exact"},{"name":"regulation of protein localization to telomere","type":"exact"}],"termid":"GO:1904814"}


id: PBO:0069105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 353, pseudogene","termid":"PBO:0069105"}


id: PBO:0089040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase, Adh1-like","termid":"PBO:0089040"}


id: GO:0099501
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding an exocytic vesicle.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle membrane","termid":"GO:0030658"},{"relation_name":"part_of","term_name":"exocytic vesicle","termid":"GO:0070382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"exocytic vesicle membrane","synonyms":[{"name":"secretory vesicle membrane","type":"broad"}],"termid":"GO:0099501"}


id: PBO:0078021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 11","termid":"PBO:0078021"}


id: PBO:0027030
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nuclear_envelope","termid":"PBO:0027030"}


id: MOD:01901
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks two L-threonine residues to form L-threonine 5-methyloxazole-4-carboxylic acid.","definition_xrefs":["PubMed:21568297","PubMed:21950656","RESID:AA0572"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues (Thr)","termid":"MOD:01422"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-threonine 5-methyloxazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S,2R)-1-amino-2-hydroxypropyl]-5-methyl-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"2-[(1S,2R)-1-azanyl-2-hydroxypropyl]-5-methyl-1,3-oxazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK 5-methyloxazole-4-carboxylic acid (Thr-Thr)","type":"exact"},{"name":"L-threonine 5-methyloxazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01901"}


id: GO:1900716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of violaceol II biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"violaceol II biosynthetic process","termid":"GO:1900593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of violaceol II biosynthetic process","synonyms":[{"name":"regulation of violaceol II anabolism","type":"exact"},{"name":"regulation of violaceol II biosynthesis","type":"exact"},{"name":"regulation of violaceol II formation","type":"exact"},{"name":"regulation of violaceol II synthesis","type":"exact"}],"termid":"GO:1900716"}


id: PBO:0053174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine, glutamate and lysine rich 1","termid":"PBO:0053174"}


id: PBO:0016050
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of Tsm One","termid":"PBO:0016050"}


id: PBO:0001236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family GTPase Cdc42","termid":"PBO:0001236"}


id: PBO:0061254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide synthase interacting protein","termid":"PBO:0061254"}


id: PBO:0068686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 67, pseudogene","termid":"PBO:0068686"}


id: PBO:0054280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1671","termid":"PBO:0054280"}


id: PBO:0043815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copine 6","termid":"PBO:0043815"}


id: GO:0009611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to wounding","secondary_identifiers":["GO:0002245"],"synonyms":[{"name":"physiological response to wounding","type":"exact"}],"termid":"GO:0009611"}


id: GO:0044719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the size of an imaginal disc-derived wing.","definition_xrefs":["PMID:21393605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure size","termid":"GO:0090066"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of imaginal disc-derived wing size","termid":"GO:0044719"}


id: PBO:0071097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 99","termid":"PBO:0071097"}


id: PBO:0091129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase complex subunit Sap18","termid":"PBO:0091129"}


id: PBO:0085875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; identified by expression profiling and mass spectrometry","termid":"PBO:0085875"}


id: FYPO:0003552
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of an RNA catabolic process is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased RNA level","termid":"FYPO:0001890"},{"relation_name":"is_a","term_name":"abnormal RNA catabolic process","termid":"FYPO:0003551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA catabolic process","synonyms":[{"name":"decreased RNA breakdown","type":"exact"},{"name":"decreased RNA catabolism","type":"exact"},{"name":"decreased RNA degradation","type":"exact"},{"name":"reduced RNA catabolic process","type":"exact"}],"termid":"FYPO:0003552"}


id: _global:gained
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X gained Y if X is a variant_of X' and Y part of X but not X'.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gained","termid":"_global:gained"}


id: PR:Q9USQ8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC577.11 gene.","definition_xrefs":["UniProtKB:Q9USQ8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C577.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.11","synonyms":[{"name":"Spom972h-SPBC577.11","type":"exact"}],"termid":"PR:Q9USQ8"}


id: PR:Q9P7N6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mgr3 gene.","definition_xrefs":["UniProtKB:Q9P7N6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat-containing protein P27G11.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.02","synonyms":[{"name":"Spom972h-mgr3","type":"exact"}],"termid":"PR:Q9P7N6"}


id: FYPO:0001664
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell is higher than normal during a cellular response to glucose stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular cAMP level","termid":"FYPO:0001661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular cAMP level during cellular response to glucose stimulus","synonyms":[{"name":"increased cAMP accumulation during cellular response to glucose stimulus","type":"related"},{"name":"increased cellular cAMP level in response to glucose stimulus","type":"exact"},{"name":"increased cellular cyclic AMP level during cellular response to glucose stimulus","type":"exact"}],"termid":"FYPO:0001664"}


id: GO:0043435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a corticotropin-releasing hormone stimulus. Corticotropin-releasing hormone is a peptide hormone involved in the stress response.","definition_xrefs":["Wikipedia:Corticotropin-releasing_hormone","PMID:15134857","PMID:11027914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to corticotropin-releasing hormone","synonyms":[{"name":"response to CRF stimulus","type":"exact"},{"name":"response to CRH stimulus","type":"exact"},{"name":"response to corticoliberin stimulus","type":"exact"},{"name":"response to corticotropin-releasing factor stimulus","type":"exact"},{"name":"response to corticotropin-releasing hormone stimulus","type":"exact"}],"termid":"GO:0043435"}


id: GO:0036384
data:
  {"annotated_genes":["SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110032],"is_not":false,"summary":null,"term":"GO:0036384"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP + H2O = CMP + phosphate.","definition_xrefs":["GOC:al","RHEA:64880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate phosphatase activity","termid":"GO:0017110"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"CDP phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CDP diphosphatase activity","type":"broad"},{"name":"CDPase activity","type":"exact"},{"name":"cytidine diphosphatase activity","type":"exact"},{"name":"cytidine-diphosphatase activity","type":"exact"}],"termid":"GO:0036384","terms_by_termid":{"GO:0036384":null}}


id: PBO:0077512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 230","termid":"PBO:0077512"}


id: GO:0021514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells in the neural tube acquire specialized structural and/or functional features of ventral spinal cord interneurons. Ventral spinal cord interneurons are cells located in the ventral portion of the spinal cord that transmit signals between sensory and motor neurons and are required for reflexive responses. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GO_REF:0000021","GOC:cls","PMID:11262869","GOC:dph","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in spinal cord","termid":"GO:0021515"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"ventral spinal cord development","termid":"GO:0021517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral spinal cord interneuron differentiation","termid":"GO:0021514"}


id: PBO:0088805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protor homolog, Bit61","termid":"PBO:0088805"}


id: PBO:0078649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 2-5","termid":"PBO:0078649"}


id: PR:O94672
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec2302 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec23-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.04","synonyms":[{"name":"Spom972h-sec2302","type":"exact"}],"termid":"PR:O94672"}


id: FYPO:0002988
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ammonium. Cells stop growing (and may die) at a concentration of ammonium that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to ammonium","synonyms":[{"name":"hypersensitive to ammonium","type":"exact"},{"name":"sensitive to NH4+","type":"related"},{"name":"sensitive to ammonium during mitotic cell cycle","type":"related"},{"name":"sensitive to ammonium during vegetative growth","type":"exact"}],"termid":"FYPO:0002988"}


id: SO:0001191
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An oligo composed of TNA residues.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"TNA","termid":"SO:0001190"},{"relation_name":"is_a","term_name":"synthetic_oligo","termid":"SO:0001247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNA_oligo","secondary_identifiers":["http://en.wikipedia.org/wiki/Threose_nucleic_acid"],"synonyms":[{"name":"TNA oligo","type":"exact"},{"name":"threose nucleic acid","type":"exact"}],"termid":"SO:0001191"}


id: PBO:0027198
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cytoplasmic_microtubule_formation_from_nuclear_microtubules","termid":"PBO:0027198"}


id: PBO:0056417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCHF11 divergent transcript","termid":"PBO:0056417"}


id: GO:0071830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a triglyceride-rich lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma lipoprotein particle clearance","termid":"GO:0034381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"triglyceride-rich lipoprotein particle clearance","termid":"GO:0071830"}


id: PBO:0051948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-trisphosphate 3-kinase B","termid":"PBO:0051948"}


id: PBO:0028712
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_global_homologous_chromosome_pairing","termid":"PBO:0028712"}


id: GO:0099548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse mediated by nitric oxide.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic signaling by nitric oxide","termid":"GO:0099163"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by soluble gas","termid":"GO:0099543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"trans-synaptic signaling by nitric oxide","termid":"GO:0099548"}


id: GO:2000758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of peptidyl-lysine acetylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein acetylation","termid":"GO:1901985"},{"relation_name":"is_a","term_name":"regulation of peptidyl-lysine acetylation","termid":"GO:2000756"},{"relation_name":"positively_regulates","term_name":"peptidyl-lysine acetylation","termid":"GO:0018394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peptidyl-lysine acetylation","termid":"GO:2000758"}


id: GO:0102905
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate(3-) = (+)-valencene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.73","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"valencene synthase activity","secondary_identifiers":["MetaCyc:RXN-8608","RHEA:29511"],"termid":"GO:0102905"}


id: GO:0042184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of xylene, a mixture of three colorless, aromatic hydrocarbon liquids, ortho-, meta- and para-xylene.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylene metabolic process","termid":"GO:0018948"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150"],"is_obsolete":false,"name":"xylene catabolic process","synonyms":[{"name":"xylene breakdown","type":"exact"},{"name":"xylene catabolism","type":"exact"},{"name":"xylene degradation","type":"exact"}],"termid":"GO:0042184"}


id: GO:0061784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) from peptidoglycan.","definition_xrefs":["PMID:22748813","GOC:jh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosaminidase activity","termid":"GO:0015929"},{"relation_name":"is_a","term_name":"peptidoglycan muralytic activity","termid":"GO:0061783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"peptidoglycan N-acetylglucosaminidase activity","termid":"GO:0061784"}


id: PBO:0091959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-1-semialdehyde 2,1-aminomutase","termid":"PBO:0091959"}


id: GO:0038068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in a MAP kinase (MAPK) substrate, as part of a MAPK signaling cascade that contributes to cell wall organization or biogenesis.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase kinase activity involved in cell wall organization or biogenesis (obsolete GO:0038068)","synonyms":[{"name":"MAP kinase kinase activity involved in cell wall biogenesis","type":"narrow"},{"name":"MAP2K activity involved in cell wall integrity","type":"exact"},{"name":"MAPKK activity involved in cell wall integrity","type":"exact"}],"termid":"GO:0038068"}


id: GO:0007144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the first meiotic division occurs in the female germline.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I","termid":"GO:0007127"},{"relation_name":"is_a","term_name":"female meiotic nuclear division","termid":"GO:0007143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"female meiosis I","synonyms":[{"name":"female meiosis I nuclear division","type":"exact"}],"termid":"GO:0007144"}


id: GO:1990732
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A non-membrane-bounded organelle found within the chloroplasts of algae and hornworts; responsible for carbon dioxide fixation.","definition_xrefs":["Wikipedia:Pyrenoid","GOC:cjm","GOC:pr","PMID:23345319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"pyrenoid","termid":"GO:1990732"}


id: PBO:0000530
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.2.2","termid":"PBO:0000530"}


id: GO:0140314
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a calcium ion to prevent it from interacting with other partners or to inhibit its localization to the area of the cell or complex where it is active.","definition_xrefs":["PMID:13130076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion sequestering activity","termid":"GO:0140487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140313"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140313","GO:0003674"],"is_obsolete":false,"name":"calcium ion sequestering activity","termid":"GO:0140314"}


id: PBO:0016061
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae XRN1","termid":"PBO:0016061"}


id: GO:0102045
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-chlorobenzoate + O2 + a reduced electron acceptor = 3-chlorobenzoate-cis-3,4-diol + an oxidized electron acceptor.","definition_xrefs":["GOC:pz","PMID:8285670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3-chlorobenzoate-3,4-oxygenase activity","secondary_identifiers":["MetaCyc:RXN-10422"],"termid":"GO:0102045"}


id: PBO:0000765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Moeb/ThiF domain","termid":"PBO:0000765"}


id: GO:0090150
data:
  {"annotated_genes":["SJAG_00277","SJAG_00330","SJAG_01951","SJAG_00144","SJAG_02320","SJAG_01809","SJAG_01282","SJAG_00404","SJAG_00569","SJAG_00175","SJAG_05300","SJAG_04294","SJAG_01240","SJAG_02361","SJAG_01640","SJAG_01178","SJAG_04763","SJAG_03684","SJAG_01120","SJAG_01759","SJAG_02912","SJAG_02065","SJAG_01299","SJAG_02034","SJAG_01782","SJAG_02177","SJAG_01405","SJAG_00895","SJAG_02437","SJAG_01840","SJAG_03781","SJAG_01435","SJAG_04609","SJAG_00959","SJAG_03440","SJAG_00603","SJAG_05414","SJAG_03756","SJAG_02354","SJAG_03838","SJAG_03029","SJAG_01733","SJAG_04203","SJAG_00379","SJAG_02524","SJAG_01917","SJAG_01496","SJAG_05302","SJAG_01349","SJAG_04451","SJAG_01558","SJAG_00916","SJAG_04129","SJAG_01949","SJAG_02914","SJAG_02588","SJAG_01641","SJAG_04684","SJAG_02330","SJAG_04208","SJAG_01112","SJAG_02231","SJAG_02208","SJAG_01780","SJAG_01999","SJAG_03315","SJAG_03865","SJAG_02282","SJAG_04996","SJAG_03502","SJAG_02797","SJAG_01516","SJAG_03411","SJAG_02456","SJAG_01367","SJAG_01940","SJAG_01223","SJAG_03915","SJAG_03515","SJAG_03416","SJAG_02355","SJAG_01127","SJAG_01114","SJAG_00360","SJAG_03396","SJAG_00858","SJAG_03970","SJAG_03930","SJAG_02398","SJAG_03955","SJAG_00064","SJAG_04565","SJAG_00687","SJAG_03633"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006613"},{"annotations":[97188,109072,90951,114949,87342,88330,103422,108847,114564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099638"},{"annotations":[91782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061951"},{"annotations":[97073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140569"},{"annotations":[112381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140570"},{"annotations":[103094,91209,102458,104849,105632,109074,87218,94774,103201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043001"},{"annotations":[84156],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0042997"},{"annotations":[105679,91800,83992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006620"},{"annotations":[86639,94113,93405,102214,104363,105386,106458],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031204"},{"annotations":[107453,91488,86481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045046"},{"annotations":[94656,97249,104452,87713,102215,105387,100537,87296,99579,90886,106454,94429,109908,111162,104364,110456,100835,108314,94114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045048"},{"annotations":[109263,112344,95488,103622,103564,86451,98987,103348,84723,103645,88836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045039"},{"annotations":[109415,96973,95067,84864,110762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"},{"annotations":[110763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051204"},{"annotations":[94645,103623,107856,86961,106452,106098,94296,86431,106462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045040"},{"annotations":[99175,91959,93100,104333,106203,59846,103354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006612"},{"annotations":[87056],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044395"},{"annotations":[105806,105680,86883,90338,112000,112723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006614"},{"annotations":[87676,110434,111199],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006617"},{"annotations":[94115,102216,104365,98645,112001,105388],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006616"},{"annotations":[107060,84015,110195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071816"}]},"cv_name":"biological_process","definition":"The 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of protein localization to membrane","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"establishment of protein localisation in membrane","type":"exact"},{"name":"establishment of protein localization in membrane","type":"exact"}],"termid":"GO:0090150","terms_by_termid":{"GO:0006612":null,"GO:0006613":null,"GO:0006614":null,"GO:0006616":null,"GO:0006617":null,"GO:0006620":null,"GO:0031204":null,"GO:0032979":null,"GO:0042997":null,"GO:0043001":null,"GO:0044395":null,"GO:0045039":null,"GO:0045040":null,"GO:0045046":null,"GO:0045048":null,"GO:0051204":null,"GO:0061951":null,"GO:0071816":null,"GO:0099638":null,"GO:0140569":null,"GO:0140570":null}}


id: PBO:0077855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tropomyosin 1","termid":"PBO:0077855"}


id: PBO:0067695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal pseudogene 3","termid":"PBO:0067695"}


id: FYPO:0009112
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell adhesion phenotype observed in the vegetative growth phase of the life cycle in which flocculation does not occur in conditions where wild-type cells floculate. Flocculation is the non-sexual aggregation of cells.","definition_xrefs":["PMID:35924983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell adhesion during vegetative growth","termid":"FYPO:0000009"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished flocculation during vegetative growth","termid":"FYPO:0009112"}


id: MOD:00256
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that dioxygenates an L-methionine residue to L-methionine sulfone.","definition_xrefs":["PubMed:7786407","PubMed:9252331","OMSSA:115","Unimod:425#M","RESID:AA0251","PubMed:12686488","DeltaMass:205","PubMed:7791219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated L-methionine","termid":"MOD:00709"},{"relation_name":"is_a","term_name":"sulfur dioxygenated residue","termid":"MOD:01855"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-methionine sulfone","synonyms":[{"name":"(2S)-2-amino-4-(methylsulfonyl)butanoic acid","type":"exact"},{"name":"Dioxidation","type":"related"},{"name":"L-methionine S,S-dioxide","type":"exact"},{"name":"L-methionine sulfone","type":"exact"},{"name":"MOD_RES Methionine sulfone","type":"exact"},{"name":"MetO2","type":"exact"},{"name":"MethionylSulphone","type":"exact"},{"name":"Oxidation of Methionine (to Sulphone)","type":"exact"},{"name":"S,S-dioxymethionine","type":"exact"},{"name":"dihydroxy","type":"related"},{"name":"suphonem","type":"exact"}],"termid":"MOD:00256"}


id: PBO:0083481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene SYM1, a mitochondrial protein involved in ethanol metabolism","termid":"PBO:0083481"}


id: GO:0045940
data:
  {"annotated_genes":["SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving steroids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid metabolic process","termid":"GO:0019218"},{"relation_name":"is_a","term_name":"positive regulation of lipid metabolic process","termid":"GO:0045834"},{"relation_name":"positively_regulates","term_name":"steroid metabolic process","termid":"GO:0008202"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of steroid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of steroid metabolic process","type":"narrow"},{"name":"positive regulation of steroid metabolism","type":"exact"},{"name":"stimulation of steroid metabolic process","type":"narrow"},{"name":"up regulation of steroid metabolic process","type":"exact"},{"name":"up-regulation of steroid metabolic process","type":"exact"},{"name":"upregulation of steroid metabolic process","type":"exact"}],"termid":"GO:0045940","terms_by_termid":{"GO:0070452":null}}


id: GO:1901457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to acetate.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to acetate","termid":"GO:0010034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to acetate","termid":"GO:1901457"}


id: PBO:0059824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metadherin pseudogene 4","termid":"PBO:0059824"}


id: GO:0140692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an omega-methyl-very-long-chain fatty acid + O2 + reduced [NADPH-hemoprotein reductase] = an omega-hydroxy-very-long-chain fatty acid + H+ + H2O + oxidized [NADPH-hemoprotein reductase]. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.","definition_xrefs":["RHEA:67952","PMID:16547005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid omega-hydroxylase activity","termid":"GO:0120250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"very long-chain fatty acid omega-hydroxylase activity","termid":"GO:0140692"}


id: GO:0030704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Construction of the vitelline membrane portion of the egg shell, a rigid structure required to maintain the shape of the egg.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"egg coat formation","termid":"GO:0035803"},{"relation_name":"is_a","term_name":"extracellular matrix assembly","termid":"GO:0085029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"vitelline membrane formation","termid":"GO:0030704"}


id: PBO:0045019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent protein kinase domain 2A","termid":"PBO:0045019"}


id: PBO:0043263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 22","termid":"PBO:0043263"}


id: GO:0120132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell death by apoptotic process in the bone marrow.","definition_xrefs":["GOC:BHF_miRNA","GOC:rph","GOC:BHF","PMID:27908889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of apoptotic process in bone marrow cell","termid":"GO:0071865"},{"relation_name":"positively_regulates","term_name":"apoptotic process in bone marrow cell","termid":"GO:0071839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptotic process in bone marrow cell","synonyms":[{"name":"activation of apoptosis in bone marrow","type":"narrow"},{"name":"positive regulation of apoptosis in bone marrow","type":"narrow"},{"name":"positive regulation of apoptotic process in bone marrow","type":"exact"},{"name":"positive regulation of bone marrow cell apoptosis","type":"exact"},{"name":"positive regulation of bone marrow cell programmed cell death by apoptosis","type":"exact"},{"name":"positive regulation of killing of bone marrow cells","type":"exact"},{"name":"positive regulation of programmed cell death of bone marrow cells by apoptosis","type":"exact"},{"name":"positive regulation of programmed cell death, bone marrow cells","type":"exact"},{"name":"up regulation of apoptosis in bone marrow","type":"exact"},{"name":"up-regulation of apoptosis in bone marrow","type":"exact"},{"name":"upregulation of apoptosis in bone marrow","type":"exact"}],"termid":"GO:0120132"}


id: GO:0085011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the symbiont organism by a Sec complex. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via protein secreted by Sec complex (obsolete GO:0085011)","synonyms":[{"name":"interaction with host via protein secreted by Sec secretion system","type":"exact"}],"termid":"GO:0085011"}


id: FYPO:0003549
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects the localization of a protein in a cell during one or both meiotic nuclear divisions. A protein may be observed in a place where it is not normally found, absent from a place where it is normally found, or both.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiotic cell cycle","termid":"FYPO:0004094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization during meiosis","synonyms":[{"name":"abnormal cellular protein localisation during meiosis","type":"exact"},{"name":"abnormal cellular protein localization during meiosis","type":"exact"},{"name":"abnormal protein localisation during meiosis","type":"exact"},{"name":"abnormal protein localization during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003549"}


id: PBO:0029875
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3_acetylation","termid":"PBO:0029875"}


id: PBO:0063987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 21","termid":"PBO:0063987"}


id: GO:0000090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase during which chromosomes separate and migrate towards the poles of the spindle the as part of a mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaphase","termid":"GO:0051322"},{"relation_name":"part_of","term_name":"mitotic M phase","termid":"GO:0000087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000087"}],"interesting_parent_ids":["GO:0008150","GO:0000087"],"is_obsolete":false,"name":"mitotic anaphase","termid":"GO:0000090"}


id: PBO:0034025
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_approver_email","termid":"PBO:0034025"}


id: PBO:0047262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 242 member E","termid":"PBO:0047262"}


id: GO:0050605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: superoxide + reduced rubredoxin + 2 H+ = H2O2 + rubredoxin.","definition_xrefs":["MetaCyc:1.15.1.2-RXN","EC:1.15.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antioxidant activity","termid":"GO:0016209"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on superoxide radicals as acceptor","termid":"GO:0016721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"superoxide reductase activity","secondary_identifiers":["RHEA:21324"],"synonyms":[{"name":"desulfoferrodoxin activity","type":"related"},{"name":"neelaredoxin activity","type":"related"},{"name":"rubredoxin:superoxide oxidoreductase activity","type":"related"}],"termid":"GO:0050605"}


id: GO:1904281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription mediated by RNA polymerase V.","definition_xrefs":["PMID:24726328","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"is_a","term_name":"regulation of transcription by RNA polymerase V","termid":"GO:1904279"},{"relation_name":"positively_regulates","term_name":"transcription by RNA polymerase V","termid":"GO:0001060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0006355","GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"positive regulation of transcription by RNA polymerase V","synonyms":[{"name":"activation of transcription from RNA pol V promoter","type":"narrow"},{"name":"activation of transcription from RNA polymerase V promoter","type":"narrow"},{"name":"positive regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase V promoter","type":"exact"},{"name":"up regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"up regulation of transcription from RNA polymerase V promoter","type":"exact"},{"name":"up-regulation of transcription from RNA pol V promoter","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase V promoter","type":"exact"},{"name":"upregulation of transcription from RNA pol V promoter","type":"exact"},{"name":"upregulation of transcription from RNA polymerase V promoter","type":"exact"}],"termid":"GO:1904281"}


id: GO:0006408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of snRNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA export from nucleus","termid":"GO:0006405"},{"relation_name":"is_a","term_name":"snRNA transport","termid":"GO:0051030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006913","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"snRNA export from nucleus","synonyms":[{"name":"snRNA export from cell nucleus","type":"exact"},{"name":"snRNA export out of nucleus","type":"exact"},{"name":"snRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"snRNA-nucleus export","type":"exact"}],"termid":"GO:0006408"}


id: PBO:0079647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 S","termid":"PBO:0079647"}


id: PBO:0066333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC1 and BTB domain containing protein 2","termid":"PBO:0066333"}


id: PBO:0082969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein that inhibits Gdb1p glycogen debranching activity; required for normal intracellular accumulation of glycogen; phosphorylated in vivo; expression increases during wine fermentation; protein abundance increases in response to DNA replication stress; IGD1 has a paralog, YOL024W, that arose from the whole genome duplication","termid":"PBO:0082969"}


id: FYPO:0008259
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell surface is decreased, and the localizatiion to the endosomal structure is increased. The cell surface refers to the external part of the cell wall and/or plasma membrane.","definition_xrefs":["PMID:22848669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell surface","termid":"FYPO:0008258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to cell surface with increased localization to endosomal structures","termid":"FYPO:0008259"}


id: PBO:0071778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 6","termid":"PBO:0071778"}


id: PBO:0041679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell adhesion molecule 4","termid":"PBO:0041679"}


id: GO:0051721
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to protein phosphatase 2A.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphatase binding","termid":"GO:0019903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"protein phosphatase 2A binding","synonyms":[{"name":"protein phosphatase 2 binding","type":"related"}],"termid":"GO:0051721"}


id: GO:0038025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the secreted glycoprotein reelin, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:bf","PMID:12827279","PMID:20223215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"reelin receptor activity","synonyms":[{"name":"reeler receptor activity","type":"exact"}],"termid":"GO:0038025"}


id: PBO:0082889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin-dependent kinase; has ten cyclin partners; involved in regulating the cellular response to nutrient levels and environmental conditions and progression through the cell cycle; human lissencephaly-associated homolog CDK5 functionally complements null mutation","termid":"PBO:0082889"}


id: PBO:0083945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma-glutamyltranspeptidase; major glutathione-degrading enzyme; involved in detoxification of electrophilic xenobiotics; expression induced mainly by nitrogen starvation","termid":"PBO:0083945"}


id: PBO:0074913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 83B","termid":"PBO:0074913"}


id: GO:0015099
data:
  {"annotated_genes":["SJAG_04830"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044750"}]},"cv_name":"molecular_function","definition":"Enables the transfer of nickel (Ni) cations from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transmembrane transporter activity","termid":"GO:0046915"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04830":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"nickel cation transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:TRANS-RXN-141B","RHEA:29831"],"synonyms":[{"name":"zinc, cadmium, cobalt, nickel, lead-efflux ATPase activity","type":"related"}],"termid":"GO:0015099","terms_by_termid":{"GO:0044750":null}}


id: PBO:0068979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 223, pseudogene","termid":"PBO:0068979"}


id: PBO:0040834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"baculoviral IAP repeat containing 8","termid":"PBO:0040834"}


id: PBO:0070431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome production factor 2 homolog pseudogene 1","termid":"PBO:0070431"}


id: PBO:0079042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 1-4","termid":"PBO:0079042"}


id: PBO:0047069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM131B antisense RNA 2","termid":"PBO:0047069"}


id: GO:0046212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of methyl ethyl ketone, a clear, colorless liquid with a fragrant, mint-like odor. It is used as a solvent and in making plastics, textiles and paints.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete methyl ethyl ketone biosynthetic process (obsolete GO:0046212)","synonyms":[{"name":"methyl ethyl ketone anabolism","type":"exact"},{"name":"methyl ethyl ketone biosynthesis","type":"exact"},{"name":"methyl ethyl ketone biosynthetic process","type":"exact"},{"name":"methyl ethyl ketone formation","type":"exact"},{"name":"methyl ethyl ketone synthesis","type":"exact"}],"termid":"GO:0046212"}


id: GO:0075151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of receptor-mediated signal transduction in response to host (obsolete GO:0075151)","synonyms":[{"name":"positive regulation of symbiont receptor-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075151"}


id: GO:1902001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a fatty acid is transported across a membrane.","definition_xrefs":["GOC:rb","GOC:TermGenie","PMID:9395310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid transport","termid":"GO:0015908"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"fatty acid transmembrane transport","termid":"GO:1902001"}


id: FYPO:0003920
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at the mating-type locus occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork arrest at mating-type locus","termid":"FYPO:0003083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000293","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased replication fork arrest at mating-type locus","synonyms":[{"name":"increased replication fork arrest at mating-type locus during mitotic cell cycle","type":"related"},{"name":"increased replication fork arrest at mating-type locus during vegetative growth","type":"exact"}],"termid":"FYPO:0003920"}


id: PBO:0042448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 pseudogene 1","termid":"PBO:0042448"}


id: PBO:0048148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD domain containing ion transport regulator 7","termid":"PBO:0048148"}


id: PBO:0030479
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_cysteine_level","termid":"PBO:0030479"}


id: PBO:0057651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1244-4","termid":"PBO:0057651"}


id: PBO:0091138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein, human C6orf136 ortholog","termid":"PBO:0091138"}


id: PBO:0087672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Isw1b complex; exhibits nucleosome-stimulated ATPase activity and acts within coding regions to coordinate transcription elongation with termination and processing; contains a PHD finger motif; other complex members are Isw1p and Ioc4p","termid":"PBO:0087672"}


id: PBO:0031689
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_peroxisome_localization","termid":"PBO:0031689"}


id: GO:1903420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within an endoplasmic reticulum tubular network.","definition_xrefs":["GO_REF:0000087","PMID:25103238","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to endoplasmic reticulum","termid":"GO:0070972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to endoplasmic reticulum tubular network","synonyms":[{"name":"protein localisation in endoplasmic reticulum tubular network","type":"exact"},{"name":"protein localisation to endoplasmic reticulum tubular network","type":"exact"},{"name":"protein localization in endoplasmic reticulum tubular network","type":"exact"},{"name":"protein localization to tubular ER","type":"related"}],"termid":"GO:1903420"}


id: PBO:0050056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, W (pseudogene)","termid":"PBO:0050056"}


id: GO:1900982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phenazine biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of phenazine biosynthetic process","termid":"GO:1900980"},{"relation_name":"positively_regulates","term_name":"phenazine biosynthetic process","termid":"GO:0002047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of phenazine biosynthetic process","synonyms":[{"name":"activation of acridizine biosynthesis","type":"related"},{"name":"activation of acridizine biosynthetic process","type":"related"},{"name":"activation of azophenylene biosynthesis","type":"related"},{"name":"activation of azophenylene biosynthetic process","type":"related"},{"name":"activation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"activation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"activation of dibenzopyrazine biosynthesis","type":"related"},{"name":"activation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"activation of phenazine biosynthetic process","type":"narrow"},{"name":"positive regulation of acridizine biosynthesis","type":"related"},{"name":"positive regulation of acridizine biosynthetic process","type":"related"},{"name":"positive regulation of azophenylene biosynthesis","type":"related"},{"name":"positive regulation of azophenylene biosynthetic process","type":"related"},{"name":"positive regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"positive regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"positive regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"positive regulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"up regulation of acridizine biosynthesis","type":"related"},{"name":"up regulation of acridizine biosynthetic process","type":"related"},{"name":"up regulation of azophenylene biosynthesis","type":"related"},{"name":"up regulation of azophenylene biosynthetic process","type":"related"},{"name":"up regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"up regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"up regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"up regulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"up regulation of phenazine biosynthetic process","type":"exact"},{"name":"up-regulation of acridizine biosynthesis","type":"related"},{"name":"up-regulation of acridizine biosynthetic process","type":"related"},{"name":"up-regulation of azophenylene biosynthesis","type":"related"},{"name":"up-regulation of azophenylene biosynthetic process","type":"related"},{"name":"up-regulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"up-regulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"up-regulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"up-regulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"up-regulation of phenazine biosynthetic process","type":"exact"},{"name":"upregulation of acridizine biosynthesis","type":"related"},{"name":"upregulation of acridizine biosynthetic process","type":"related"},{"name":"upregulation of azophenylene biosynthesis","type":"related"},{"name":"upregulation of azophenylene biosynthetic process","type":"related"},{"name":"upregulation of dibenzo-p-diazine biosynthesis","type":"related"},{"name":"upregulation of dibenzo-p-diazine biosynthetic process","type":"related"},{"name":"upregulation of dibenzopyrazine biosynthesis","type":"related"},{"name":"upregulation of dibenzopyrazine biosynthetic process","type":"related"},{"name":"upregulation of phenazine biosynthetic process","type":"exact"}],"termid":"GO:1900982"}


id: PBO:0090176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin Pex28/29","termid":"PBO:0090176"}


id: PBO:0003525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal targeting signal receptor Pex5","termid":"PBO:0003525"}


id: PBO:0045315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA nucleotidylexotransferase","termid":"PBO:0045315"}


id: PBO:0000624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA methyltransferase Tgs1 (predicted)","termid":"PBO:0000624"}


id: PBO:0034273
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-starts","termid":"PBO:0034273"}


id: GO:0044572
data:
  {"annotated_genes":["SJAG_03701","SJAG_02306","SJAG_00972","SJAG_01417","SJAG_02994","SJAG_00455","SJAG_04016"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84289,88827,94992,97667,105299,105914,113928],"is_not":false,"summary":null,"term":"GO:0044572"}]},"cv_name":"biological_process","definition":"The incorporation of four iron atoms and four sulfur atoms into an iron-sulfur cluster.","definition_xrefs":["PMID:15952888","GOC:jl","GOC:tt","GOC:pde","GOC:vw","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster assembly","termid":"GO:0016226"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00455":null,"SJAG_00972":null,"SJAG_01417":null,"SJAG_02306":null,"SJAG_02994":null,"SJAG_03701":null,"SJAG_04016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0016226","GO:0008150"],"is_obsolete":false,"name":"[4Fe-4S] cluster assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"4Fe-4S cluster assembly","type":"exact"},{"name":"[4Fe-4S] cluster biosynthetic process","type":"related"}],"termid":"GO:0044572","terms_by_termid":{"GO:0044572":null}}


id: PBO:0053108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysocardiolipin acyltransferase 1","termid":"PBO:0053108"}


id: GO:0007432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of where the salivary gland forms, the total number of salivary gland cells and how many cells are allocated to each of the specialised cell types within the salivary gland.","definition_xrefs":["PMID:11598957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of animal organ boundary","termid":"GO:0010160"},{"relation_name":"part_of","term_name":"salivary gland development","termid":"GO:0007431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"salivary gland boundary specification","synonyms":[{"name":"salivary gland determination","type":"exact"}],"termid":"GO:0007432"}


id: GO:0010894
data:
  {"annotated_genes":["SJAG_02104"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus.","definition_xrefs":["GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid metabolic process","termid":"GO:0045939"},{"relation_name":"is_a","term_name":"regulation of steroid biosynthetic process","termid":"GO:0050810"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"negatively_regulates","term_name":"steroid biosynthetic process","termid":"GO:0006694"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02104":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of steroid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010894","terms_by_termid":{"GO:0010895":null}}


id: GO:1904066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any G protein-coupled receptor signaling pathway that is involved in dauer larval development.","definition_xrefs":["GOC:kmv","GOC:TermGenie","GO_REF:0000060","PMID:22665789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"},{"relation_name":"part_of","term_name":"dauer larval development","termid":"GO:0040024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled receptor signaling pathway involved in dauer larval development","synonyms":[{"name":"G protein coupled receptor protein signaling pathway involved in dauer larval development","type":"exact"},{"name":"G protein coupled receptor protein signalling pathway involved in dauer larval development","type":"exact"},{"name":"G-protein coupled receptor protein signal transduction involved in dauer larval development","type":"exact"},{"name":"G-protein coupled receptor protein signaling pathway involved in dauer larval development","type":"exact"},{"name":"G-protein coupled receptor signalling pathway involved in dauer larval development","type":"exact"},{"name":"G-protein-coupled receptor protein signalling pathway involved in dauer larval development","type":"exact"},{"name":"GPCR signaling pathway involved in dauer larval development","type":"exact"},{"name":"GPCR signalling pathway involved in dauer larval development","type":"exact"}],"termid":"GO:1904066"}


id: GO:0102009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a dipeptide with proline at the C-terminal = L-proline + a standard alpha amino acid.","definition_xrefs":["EC:3.4.13.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dipeptidase activity","termid":"GO:0016805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0008233","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"proline dipeptidase activity","secondary_identifiers":["MetaCyc:3.4.13.9-RXN","RHEA:76407"],"termid":"GO:0102009"}


id: PBO:0074012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 6 pseudogene 3","termid":"PBO:0074012"}


id: GO:0036151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Remodeling the acyl chains of phosphatidylcholine, through sequential deacylation and re-acylation reactions, to generate phosphatidylcholine containing different types of fatty acid acyl chains.","definition_xrefs":["GOC:mw","PMID:18195019","PMID:18458083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine metabolic process","termid":"GO:0046470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylcholine acyl-chain remodeling","synonyms":[{"name":"phosphatidylcholine acyl-chain remodelling","type":"exact"}],"termid":"GO:0036151"}


id: GO:0006475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of an acetyl group to a non-terminal amino acid in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetylation","termid":"GO:0006473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"internal protein amino acid acetylation","termid":"GO:0006475"}


id: GO:0071152
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the association of the guanine nucleotide exchange factor synembrin with the alpha(q) subunit of a heterotrimeric G protein.","definition_xrefs":["GOC:mah","PMID:12509430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"G-protein alpha(q)-synembrin complex","synonyms":[{"name":"Ric-8A G(q) alpha subunit complex","type":"narrow"}],"termid":"GO:0071152"}


id: PBO:0089075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex/transcription factor TFIID complex subunit Taf9","termid":"PBO:0089075"}


id: PBO:0069995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1290, pseudogene","termid":"PBO:0069995"}


id: PR:Q9P7S3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssr3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7S3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complexes subunit ssr3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.10c","synonyms":[{"name":"Spom972h-ssr3","type":"exact"}],"termid":"PR:Q9P7S3"}


id: PBO:0042683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT enhancer binding protein epsilon","termid":"PBO:0042683"}


id: PBO:0080851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 3 pseudogene 1","termid":"PBO:0080851"}


id: PBO:0017711
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana GRF7","termid":"PBO:0017711"}


id: GO:0031691
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an alpha-1A adrenergic receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor binding","termid":"GO:0031690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"alpha-1A adrenergic receptor binding","synonyms":[{"name":"alpha-1A adrenergic receptor ligand","type":"narrow"}],"termid":"GO:0031691"}


id: GO:0008354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell specialized to produce haploid gametes through the embryo from its site of production to the place where the gonads will form.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"gamete generation","termid":"GO:0007276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ cell migration","synonyms":[{"name":"germ-cell migration","type":"exact"},{"name":"pole cell migration","type":"narrow"},{"name":"primordial germ cell migration","type":"related"}],"termid":"GO:0008354"}


id: PBO:0087195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA-binding protein required for 40S ribosomal subunit biogenesis; contains an RNA recognition motif (RRM); hydrophilin essential to overcome the stress of the desiccation-rehydration process; NOP6 may be a fungal-specific gene as no homologs have been yet identified in higher eukaryotes","termid":"PBO:0087195"}


id: PR:Q9Y7Z8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A myosin-If that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC146.13c","secondary_identifiers":["UniProtKB:Q9Y7Z8"],"synonyms":[{"name":"SPBC146.13c","type":"related"},{"name":"Spom972h-MYO1F","type":"exact"},{"name":"class I unconventional myosin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"type I myosin (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7Z8"}


id: GO:0070603
data:
  {"annotated_genes":["SJAG_04879","SJAG_02869","SJAG_02254","SJAG_01465","SJAG_02872","SJAG_04213","SJAG_02778","SJAG_02385","SJAG_04097","SJAG_02798","SJAG_03145","SJAG_00739","SJAG_03787","SJAG_03982","SJAG_03758","SJAG_05282","SJAG_05192","SJAG_00045","SJAG_02571","SJAG_02500","SJAG_02589","SJAG_03844","SJAG_04755","SJAG_03033","SJAG_02447","SJAG_01016","SJAG_02549","SJAG_01611","SJAG_04989","SJAG_04005","SJAG_01111","SJAG_00735","SJAG_03839","SJAG_01622","SJAG_02466","SJAG_03036","SJAG_04355","SJAG_05020","SJAG_00440","SJAG_00934","SJAG_02303","SJAG_00743","SJAG_00746","SJAG_02990","SJAG_03576","SJAG_03944","SJAG_05313","SJAG_04596","SJAG_03694","SJAG_03579","SJAG_00873"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[69380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008623"},{"annotations":[108297,97743,91531,97615,109211,105110,84934,105625,89556,90064,90178,95447,95199,83871,88840,110286,111469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031011"},{"annotations":[83726,101065,109197,84222,90267,110462,90211,90067,106666,88341,100614,111323,86642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016586"},{"annotations":[109357,104214,108164,88116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070824"},{"annotations":[83727,90193,91950,111073,109198,86643,89559,90212,90268,103494,104515,90068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016514"},{"annotations":[113343,84049,113527,95020,86750,110781,97032,108301,92712,109214,97747,105118,94299,109384,88419,103932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000812"}]},"cv_name":"cellular_component","definition":"A protein complex that contains an ortholog of the Saccharomyces ATPase Swi2/Snf2 as one of the catalytic subunit components (ATPase) and mediates assembly of nucleosomes, changes to the spacing or structure of nucleosomes, or some combination of those activities in a manner that requires ATP.","definition_xrefs":["GOC:bhm","GOC:krc","PMID:16155938","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"ATPase complex","termid":"GO:1904949"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00440":null,"SJAG_00735":null,"SJAG_00739":null,"SJAG_00743":null,"SJAG_00746":null,"SJAG_00873":null,"SJAG_00934":null,"SJAG_01016":null,"SJAG_01111":null,"SJAG_01465":null,"SJAG_01611":null,"SJAG_01622":null,"SJAG_02254":null,"SJAG_02303":null,"SJAG_02385":null,"SJAG_02447":null,"SJAG_02466":null,"SJAG_02500":null,"SJAG_02549":null,"SJAG_02571":null,"SJAG_02589":null,"SJAG_02778":null,"SJAG_02798":null,"SJAG_02869":null,"SJAG_02872":null,"SJAG_02990":null,"SJAG_03033":null,"SJAG_03036":null,"SJAG_03145":null,"SJAG_03576":null,"SJAG_03579":null,"SJAG_03694":null,"SJAG_03758":null,"SJAG_03787":null,"SJAG_03839":null,"SJAG_03844":null,"SJAG_03944":null,"SJAG_03982":null,"SJAG_04005":null,"SJAG_04097":null,"SJAG_04213":null,"SJAG_04355":null,"SJAG_04596":null,"SJAG_04755":null,"SJAG_04879":null,"SJAG_04989":null,"SJAG_05020":null,"SJAG_05192":null,"SJAG_05282":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"SWI/SNF superfamily-type complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0090544"],"synonyms":[{"name":"BAF-type complex","type":"exact"},{"name":"SWI-SNF global transcription activator complex","type":"related"},{"name":"SWI-SNF-type complex","type":"exact"},{"name":"SWI/SNF-type complex","type":"related"},{"name":"SWI2/SNF2 superfamily ATP-dependent chromatin remodeling complex","type":"related"}],"termid":"GO:0070603","terms_by_termid":{"GO:0000812":null,"GO:0008623":null,"GO:0016514":null,"GO:0016586":null,"GO:0031011":null,"GO:0070824":null}}


id: GO:0062126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform primary fatty amides.","definition_xrefs":["PMID:11128635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"fatty acid primary amide metabolic process","synonyms":[{"name":"primary fatty amide metabolic process","type":"exact"}],"termid":"GO:0062126"}


id: FYPO:0003394
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitochondrial electron transport from NADH to ubiquinone is decreased.","definition_xrefs":["PomBase:mah","GO:0006120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular respiration","termid":"FYPO:0000342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased mitochondrial electron transport, NADH to ubiquinone","synonyms":[{"name":"decreased NADH cytochrome c oxidoreductase","type":"related"},{"name":"decreased NADH dehydrogenase (quinone) activity and ubiquinol-cytochrome-c reductase activity","type":"related"},{"name":"decreased mitochondrial electron transport, NADH to ubiquinone, during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial electron transport, NADH to ubiquinone, during vegetative growth","type":"exact"},{"name":"reduced mitochondrial electron transport, NADH to ubiquinone","type":"exact"}],"termid":"FYPO:0003394"}


id: GO:0008682
data:
  {"annotated_genes":["SJAG_00459"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105331],"is_not":false,"summary":null,"term":"GO:0008682"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 6-methoxy-3-methyl-2-all-trans-polyprenyl-1,4-benzoquinol + AH2 + O2 = A + a 3-demethylubiquinol + H2O.","definition_xrefs":["RHEA:50908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-demethoxyubiquinol 3-hydroxylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:OCTAPRENYL-METHYL-METHOXY-BENZOQ-OH-RXN","MetaCyc:RXN-18458","EC:1.14.99.60"],"synonyms":[{"name":"2-octoprenyl-3-methyl-6-methoxy-1,4-benzoquinone hydroxylase activity","type":"narrow"},{"name":"demethoxy-ubiquinone hydroxylase","type":"related"},{"name":"demethoxyubiquinone monooxygenase","type":"related"}],"termid":"GO:0008682","terms_by_termid":{"GO:0008682":null}}


id: PBO:0046012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1 pseudogene 7","termid":"PBO:0046012"}


id: GO:0033933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->2)-alpha-D-glucosidic linkages at the branch points of dextrans and related polysaccharides, producing free D-glucose.","definition_xrefs":["EC:3.2.1.115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucosidase activity","termid":"GO:0090599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"branched-dextran exo-1,2-alpha-glucosidase activity","secondary_identifiers":["MetaCyc:3.2.1.115-RXN"],"synonyms":[{"name":"1,2-alpha-D-glucosyl-branched-dextran 2-glucohydrolase activity","type":"related"},{"name":"dextran 1,2-alpha-glucosidase activity","type":"related"},{"name":"dextran alpha-1,2 debranching enzyme","type":"related"}],"termid":"GO:0033933"}


id: PBO:0038518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABCF2-H2BK1 readthrough","termid":"PBO:0038518"}


id: GO:0051322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase, following metaphase, during which the chromosomes separate and migrate towards the poles of the spindle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"},{"relation_name":"part_of","term_name":"M phase","termid":"GO:0000279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaphase","secondary_identifiers":["Wikipedia:Anaphase"],"termid":"GO:0051322"}


id: GO:0102927
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: beta-chaconine + UDP-L-rhamnose = H+ + alpha-chaconine + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-chaconine rhamnosyltransferase activity (obsolete GO:0102927)","termid":"GO:0102927"}


id: PBO:0076978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trimethylguanosine synthase 1","termid":"PBO:0076978"}


id: GO:0061949
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the discharge, by sperm, of a single, anterior secretory granule before the sperm reaches to the zona pellucida of the oocyte. The process begins with the fusion of the outer acrosomal membrane with the sperm plasma membrane and ends with the exocytosis of the acrosomal contents.","definition_xrefs":["PMID:23430248","PMID:22228629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"premature acrosome loss","termid":"GO:0061948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of premature acrosome loss","termid":"GO:0061949"}


id: PBO:0086280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a potential role in response to iron deprivation; transcription increases during iron deprivation and during treatment with 2-(6-benzyl-2-pyridyl)quinazoline (BPQ) and copper; regulated by Aft1p and, to a lesser extent, by Aft2p; originally identified as a syntenic homolog of an Ashbya gossypii gene; localizes to nucleus and cytoplasm, and nuclear localization is enhanced under iron-replete conditions","termid":"PBO:0086280"}


id: PBO:0091261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, poly(A)-bearing, not reproduced","termid":"PBO:0091261"}


id: PBO:0050908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein with tetratricopeptide repeats 1","termid":"PBO:0050908"}


id: PATO:0002506
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's not having undulating edges forming lobes.","definition_xrefs":["PATOC:DOS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"surface feature shape","termid":"PATO:0001925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alobate","termid":"PATO:0002506"}


id: PBO:0057828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3147","termid":"PBO:0057828"}


id: GO:0019227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The propagation of an action potential along an axon, away from the soma.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"},{"relation_name":"is_a","term_name":"action potential propagation","termid":"GO:0098870"},{"relation_name":"part_of","term_name":"transmission of nerve impulse","termid":"GO:0019226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuronal action potential propagation","termid":"GO:0019227"}


id: PBO:0049353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 11","termid":"PBO:0049353"}


id: PBO:0048647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein beta 7","termid":"PBO:0048647"}


id: PBO:0072945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 26A","termid":"PBO:0072945"}


id: GO:0030211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of heparin, any member of a group of glycosaminoglycans of average Mr (6000-20000), consisting predominantly of alternating alpha-(1->4)-linked D-galactose and N-acetyl-D-glucosamine-6-sulfate residues.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan catabolic process","termid":"GO:0006027"},{"relation_name":"is_a","term_name":"heparin metabolic process","termid":"GO:0030202"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006790"],"is_obsolete":false,"name":"heparin catabolic process","synonyms":[{"name":"heparan sulfate catabolic process","type":"related"},{"name":"heparin breakdown","type":"exact"},{"name":"heparin catabolism","type":"exact"},{"name":"heparin degradation","type":"exact"}],"termid":"GO:0030211"}


id: PBO:0031403
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_cell","termid":"PBO:0031403"}


id: GO:0008822
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete crotonobetaine/carnitine-CoA ligase activity (obsolete GO:0008822)","synonyms":[{"name":"crotonobetaine/carnitine-CoA ligase activity","type":"exact"}],"termid":"GO:0008822"}


id: PBO:0089826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seven transmembrane receptor-like protein","termid":"PBO:0089826"}


id: PR:O94705
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox9 gene.","definition_xrefs":["UniProtKB:O94705","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.05c","synonyms":[{"name":"Spom972h-cox9","type":"exact"},{"name":"cytochrome c oxidase polypeptide VIIA (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94705"}


id: PBO:0069827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1113, pseudogene","termid":"PBO:0069827"}


id: GO:0018719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-aminohexanoate + alpha-ketoglutarate = glutamate + 6-oxohexanoate.","definition_xrefs":["UM-BBD_reactionID:r0449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016769"],"is_obsolete":false,"name":"6-aminohexanoate transaminase activity","secondary_identifiers":["MetaCyc:R562-RXN"],"termid":"GO:0018719"}


id: PR:O94560
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- far8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C1773.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.01","synonyms":[{"name":"Spom972h-far8","type":"exact"}],"termid":"PR:O94560"}


id: PBO:0058593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6724-4","termid":"PBO:0058593"}


id: FYPO:0002545
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine residues three positions C-terminal to arginine residues (i.e. in Arg-X-X-Ser, or RxxS, sequences) does not occur during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein serine phosphorylation at RxxS site during cellular response to hydroxyurea (obsolete FYPO:0002545)","synonyms":[{"name":"abolished protein serine phosphorylation at Arg-X-X-Ser site during cellular response to hydroxyurea","type":"exact"},{"name":"abolished protein serine phosphorylation at PAS site during cellular response to hydroxyurea","type":"exact"},{"name":"abolished protein serine phosphorylation at RxxS site during cellular response to HU","type":"exact"},{"name":"abolished protein serine phosphorylation at RxxS site during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"abolished protein serine phosphorylation at RxxS site during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"abolished protein serine phosphorylation at arginine-X-X-serine site during cellular response to hydroxyurea","type":"exact"},{"name":"abolished protein serine phosphorylation at phospho-Akt site during cellular response to hydroxyurea","type":"exact"},{"name":"protein serine phosphorylation abolished at RxxS site during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0002545"}


id: FYPO:0000188
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which DNA repair is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal response to DNA damage stimulus during vegetative growth","termid":"FYPO:0000157"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal DNA repair","termid":"FYPO:0006567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000293","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000298"],"is_obsolete":false,"name":"abnormal DNA repair during vegetative growth","synonyms":[{"name":"abnormal DNA repair during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000188"}


id: GO:0036441
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-pantolactone + NADP+ = 2-dehydropantolactone + NADPH + H+.","definition_xrefs":["RHEA:18981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2-dehydropantolactone reductase activity","secondary_identifiers":["KEGG_REACTION:R03155"],"termid":"GO:0036441"}


id: GO:0060233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of cell adhesion process in which an oenocyte splits off of an existing epithelial sheet.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"oenocyte delamination","termid":"GO:0060233"}


id: PBO:0081272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 37A","termid":"PBO:0081272"}


id: GO:0032195
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded intracellular vesicle formed late in the endocytic pathway when the pH in the vacuole becomes neutral prior to exocytosis.","definition_xrefs":["PMID:9276759","PMID:23494323","PMID:9394012","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole","termid":"GO:0005773"},{"relation_name":"is_a","term_name":"endocytic vesicle","termid":"GO:0030139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005773","GO:0005737"],"is_obsolete":false,"name":"post-lysosomal vacuole","synonyms":[{"name":"post-lysosome","type":"exact"},{"name":"postlysosome","type":"exact"}],"termid":"GO:0032195"}


id: PR:Q9USH2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCP31B10.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USH2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0651 protein P31B10.02, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.02","synonyms":[{"name":"Spom972h-SPCP31B10.02","type":"exact"}],"termid":"PR:Q9USH2"}


id: GO:1904494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of substance P secretion, neurotransmission.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:15292051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter secretion","termid":"GO:0046928"},{"relation_name":"is_a","term_name":"regulation of substance P secretion","termid":"GO:1904458"},{"relation_name":"regulates","term_name":"substance P secretion, neurotransmission","termid":"GO:1990793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"regulation of substance P secretion, neurotransmission","termid":"GO:1904494"}


id: PBO:0063581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pescadillo ribosomal biogenesis factor 1 pseudogene 1","termid":"PBO:0063581"}


id: GO:0015731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of 3-hydroxyphenyl propanoate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"3-hydroxyphenyl propanoate transport","synonyms":[{"name":"3-hydroxyphenyl propionate transport","type":"exact"}],"termid":"GO:0015731"}


id: GO:0080113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of growth of the seed of an plant.","definition_xrefs":["PMID:19141706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental growth","termid":"GO:0048638"},{"relation_name":"regulates","term_name":"seed growth","termid":"GO:0080112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of seed growth","synonyms":[{"name":"regulation of seed size","type":"exact"}],"termid":"GO:0080113"}


id: GO:0140275
data:
  {"annotated_genes":["SJAG_04237"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[113858],"is_not":false,"summary":null,"term":"GO:0140275"}]},"cv_name":"cellular_component","definition":"A mitochondrial intermembrane space bridging complex consisting of components of the MICOS complex in the inner mitochondrial membrane, the SAM complex in the outer membrane, a conserved DNAJ protein (human DNAJC11) and Metaxin 1.","definition_xrefs":["PMID:26477565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner mitochondrial membrane protein complex","termid":"GO:0098800"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575","GO:0005739"],"is_obsolete":false,"name":"MIB complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial intermembrane space bridging complex","type":"exact"},{"name":"mitofilin complex","type":"exact"}],"termid":"GO:0140275","terms_by_termid":{"GO:0140275":null}}


id: GO:0022848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Selectively enables the transmembrane transfer of a cation by a channel that opens upon binding acetylcholine.","definition_xrefs":["PMID:2466967","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excitatory extracellular ligand-gated monoatomic ion channel activity","termid":"GO:0005231"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"},{"relation_name":"is_a","term_name":"transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential","termid":"GO:1904315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215","GO:0038023"],"is_obsolete":false,"name":"acetylcholine-gated monoatomic cation-selective channel activity","secondary_identifiers":["GO:0004889","GO:0016904"],"synonyms":[{"name":"acetylcholine-activated cation-selective channel activity","type":"exact"},{"name":"acetylcholine-gated cation channel activity","type":"exact"},{"name":"acetylcholine-gated cation-selective channel activity","type":"broad"},{"name":"ionotropic acetylcholine receptor activity","type":"exact"},{"name":"nAChR","type":"exact"},{"name":"nicotinergic acetylcholine receptor activity","type":"exact"},{"name":"nicotinic acetylcholine-activated cation-selective channel activity","type":"exact"}],"termid":"GO:0022848"}


id: PBO:0046561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 3","termid":"PBO:0046561"}


id: GO:1901414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tetrapyrrole biosynthetic process from glycine and succinyl-CoA.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of cellular amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide metabolic process","termid":"GO:1900543"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","termid":"GO:1901413"},{"relation_name":"is_a","term_name":"negative regulation of tetrapyrrole biosynthetic process","termid":"GO:1901464"},{"relation_name":"negatively_regulates","term_name":"tetrapyrrole biosynthetic process from glycine and succinyl-CoA","termid":"GO:0033527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0033013"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0006790","GO:0006520","GO:0033013","GO:0044281"],"is_obsolete":false,"name":"negative regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","synonyms":[{"name":"down regulation of tetrapyrrole anabolism from glycine and succinyl-CoA","type":"exact"},{"name":"down regulation of tetrapyrrole biosynthesis from glycine and succinyl-CoA","type":"exact"},{"name":"down regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","type":"exact"},{"name":"down regulation of tetrapyrrole formation from glycine and succinyl-CoA","type":"exact"},{"name":"down regulation of tetrapyrrole synthesis from glycine and succinyl-CoA","type":"exact"},{"name":"down-regulation of tetrapyrrole anabolism from glycine and succinyl-CoA","type":"exact"},{"name":"down-regulation of tetrapyrrole biosynthesis from glycine and succinyl-CoA","type":"exact"},{"name":"down-regulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","type":"exact"},{"name":"down-regulation of tetrapyrrole formation from glycine and succinyl-CoA","type":"exact"},{"name":"down-regulation of tetrapyrrole synthesis from glycine and succinyl-CoA","type":"exact"},{"name":"downregulation of tetrapyrrole anabolism from glycine and succinyl-CoA","type":"exact"},{"name":"downregulation of tetrapyrrole biosynthesis from glycine and succinyl-CoA","type":"exact"},{"name":"downregulation of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","type":"exact"},{"name":"downregulation of tetrapyrrole formation from glycine and succinyl-CoA","type":"exact"},{"name":"downregulation of tetrapyrrole synthesis from glycine and succinyl-CoA","type":"exact"},{"name":"inhibition of tetrapyrrole anabolism from glycine and succinyl-CoA","type":"exact"},{"name":"inhibition of tetrapyrrole biosynthesis from glycine and succinyl-CoA","type":"exact"},{"name":"inhibition of tetrapyrrole biosynthetic process from glycine and succinyl-CoA","type":"narrow"},{"name":"inhibition of tetrapyrrole formation from glycine and succinyl-CoA","type":"exact"},{"name":"inhibition of tetrapyrrole synthesis from glycine and succinyl-CoA","type":"exact"},{"name":"negative regulation of tetrapyrrole anabolism from glycine and succinyl-CoA","type":"exact"},{"name":"negative regulation of tetrapyrrole biosynthesis from glycine and succinyl-CoA","type":"exact"},{"name":"negative regulation of tetrapyrrole formation from glycine and succinyl-CoA","type":"exact"},{"name":"negative regulation of tetrapyrrole synthesis from glycine and succinyl-CoA","type":"exact"}],"termid":"GO:1901414"}


id: GO:0018515
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + pimelyl-CoA = 2,3-didehydropimeloyl-CoA + H+ + NADH.","definition_xrefs":["RHEA:19665","EC:1.3.1.62"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"pimeloyl-CoA dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R05311","MetaCyc:1.3.1.62-RXN","UM-BBD_reactionID:r0194"],"synonyms":[{"name":"pimeloyl-CoA:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018515"}


id: PBO:0073496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small G protein signaling modulator 2","termid":"PBO:0073496"}


id: PATO:0001047
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001047 absolute resistance (obsolete PATO:0001047)","termid":"PATO:0001047"}


id: PBO:0017948
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SEC12","termid":"PBO:0017948"}


id: PBO:0053301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lin-7 homolog C, crumbs cell polarity complex component","termid":"PBO:0053301"}


id: PBO:0052388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 26B","termid":"PBO:0052388"}


id: GO:2000589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metanephric mesenchymal cell migration.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"metanephric mesenchymal cell migration","termid":"GO:0035789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric mesenchymal cell migration","synonyms":[{"name":"regulation of metanephric mesenchyme chemotaxis","type":"related"}],"termid":"GO:2000589"}


id: GO:0030314
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex formed in muscle cells between the membrane of the sarcoplasmic reticulum and invaginations of the plasma membrane (T-tubules).","definition_xrefs":["PMID:11535622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"sarcoplasm","termid":"GO:0016528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"junctional membrane complex","synonyms":[{"name":"triad junction","type":"broad"}],"termid":"GO:0030314"}


id: FYPO:0007748
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of spindle assembly during meiosis I is longer than normal. The total duration of spindle phases I (initial assembly and first stage of elongation) and II (in which elongation normally pauses, and which coincides with metaphase I) is increased due to prolongation of either or both phases.","definition_xrefs":["PMID:32723864","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle assembly during meiosis I","termid":"FYPO:0007745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000054","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of spindle assembly during meiosis I","synonyms":[{"name":"increased duration of meiosis I spindle assembly","type":"exact"},{"name":"increased duration of meiosis I spindle formation","type":"exact"},{"name":"increased duration of meiotic spindle assembly during meiosis I","type":"exact"},{"name":"increased duration of meiotic spindle formation during meiosis I","type":"exact"},{"name":"increased duration of spindle assembly phase I and II during meiosis I","type":"exact"},{"name":"prolonged meiosis I spindle assembly","type":"exact"},{"name":"prolonged meiosis I spindle formation","type":"exact"},{"name":"prolonged meiosis I spindle formation phase I and II","type":"exact"},{"name":"prolonged meiosis I spindle phase I and II","type":"exact"},{"name":"prolonged meiotic spindle assembly during meiosis I","type":"exact"},{"name":"prolonged meiotic spindle formation during meiosis I","type":"exact"}],"termid":"FYPO:0007748"}


id: GO:0001080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of one nitrogen source leads to an increase in the frequency, rate, or extent of transcription, from an RNA polymerase II promoter, of specific genes involved in the metabolism of other nitrogen sources.","definition_xrefs":["PMID:19104072","GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen catabolite regulation of transcription from RNA polymerase II promoter","termid":"GO:0001079"},{"relation_name":"is_a","term_name":"nitrogen catabolite activation of transcription","termid":"GO:0090294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0010467","GO:0006355","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"nitrogen catabolite activation of transcription from RNA polymerase II promoter","synonyms":[{"name":"positive regulation of transcription from RNA polymerase II promoter by nitrogen catabolites","type":"exact"}],"termid":"GO:0001080"}


id: GO:1903306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of regulated secretory pathway.","definition_xrefs":["PMID:12526776","GO_REF:0000058","GOC:PARL","GOC:pad","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of exocytosis","termid":"GO:0045920"},{"relation_name":"is_a","term_name":"regulation of regulated secretory pathway","termid":"GO:1903305"},{"relation_name":"negatively_regulates","term_name":"regulated exocytosis","termid":"GO:0045055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of regulated secretory pathway","synonyms":[{"name":"down regulation of regulated secretory pathway","type":"exact"},{"name":"down-regulation of regulated secretory pathway","type":"exact"},{"name":"downregulation of regulated secretory pathway","type":"exact"},{"name":"inhibition of regulated secretory pathway","type":"narrow"}],"termid":"GO:1903306"}


id: PBO:0061457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrophin receptor associated death domain, pseudogene","termid":"PBO:0061457"}


id: PBO:0000047
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"evidence","termid":"PBO:0000047"}


id: PBO:0068211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 518","termid":"PBO:0068211"}


id: PBO:0075209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide N","termid":"PBO:0075209"}


id: PBO:0056804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFSD2 lysolipid transporter A, lysophospholipid","termid":"PBO:0056804"}


id: PBO:0075621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sprouty related EVH1 domain containing 2","termid":"PBO:0075621"}


id: GO:0102888
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = delta-cuprenene + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:4.2.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"delta-cuprenene synthase activity","secondary_identifiers":["MetaCyc:RXN-8431"],"termid":"GO:0102888"}


id: GO:0033503
data:
  {"annotated_genes":["SJAG_00293","SJAG_03006","SJAG_02319","SJAG_00320"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87284,89439,112285,114905],"is_not":false,"summary":null,"term":"GO:0033503"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex that contains two RING finger proteins, which have ubiquitin ligase activity, in addition to a protein with ubiquitin-conjugating enzyme activity; catalyzes the ubiquitination of histone H2B at lysine 119 (or the equivalent residue). In Schizosaccharomyces the subunits are Rhp6, Shf1, Brl2/Rfp1 and Brl1/Rfp2.","definition_xrefs":["GOC:mah","PMID:17374714","PMID:17363370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"},{"relation_name":"is_a","term_name":"ubiquitin conjugating enzyme complex","termid":"GO:0031371"},{"relation_name":"part_of","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00320":null,"SJAG_02319":null,"SJAG_03006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"HULC complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033503","terms_by_termid":{"GO:0033503":null}}


id: PBO:0003932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein (predicted)","termid":"PBO:0003932"}


id: PBO:0036121
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_onset_of_actomyosin_contractile_ring_assembly","termid":"PBO:0036121"}


id: GO:0016358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dendrite over time, from its formation to the mature structure.","definition_xrefs":["GOC:aruk","ISBN:0198506732","PMID:22683681","GOC:jl","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite development","termid":"GO:0016358"}


id: GO:0050266
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: caffeoyl-CoA + 3-(3,4-dihydroxyphenyl)lactate = CoA + rosmarinate.","definition_xrefs":["EC:2.3.1.140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"rosmarinate synthase activity","secondary_identifiers":["MetaCyc:RXN-7633","RHEA:22344"],"synonyms":[{"name":"4-coumaroyl-CoA:4-hydroxyphenyllactic acid 4-coumaroyl transferase activity","type":"related"},{"name":"caffeoyl-CoA:3-(3,4-dihydroxyphenyl)lactate 2'-O-caffeoyl-transferase activity","type":"related"},{"name":"caffeoyl-coenzyme A:3,4-dihydroxyphenyllactic acid caffeoyltransferase activity","type":"related"},{"name":"rosmarinic acid synthase activity","type":"related"}],"termid":"GO:0050266"}


id: PBO:0002444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornichon family protein (predicted)","termid":"PBO:0002444"}


id: PBO:0054167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1538","termid":"PBO:0054167"}


id: PBO:0060570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 6","termid":"PBO:0060570"}


id: PBO:0075553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatid maturation 1","termid":"PBO:0075553"}


id: GO:0055088
data:
  {"annotated_genes":["SJAG_02064","SJAG_01912","SJAG_04323","SJAG_01422","SJAG_04317","SJAG_04550"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86216,95807,96658],"is_not":false,"summary":null,"term":"GO:0055088"},{"annotations":[98221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090156"},{"annotations":[89089,99583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055091"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of lipid within an organism or cell.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical homeostasis","termid":"GO:0048878"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01422":null,"SJAG_01912":null,"SJAG_02064":null,"SJAG_04317":null,"SJAG_04323":null,"SJAG_04550":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipid homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0055088","terms_by_termid":{"GO:0055088":null,"GO:0055091":null,"GO:0090156":null}}


id: PBO:0041417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C8 alpha chain","termid":"PBO:0041417"}


id: PBO:0082821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved NAPDH-dependent diflavin reductase; component of an early step in the cytosolic Fe-S protein assembly (CIA) machinery; transfers electrons from NADPH to the Fe-S cluster of Dre2p; plays a pro-death role under oxidative stress; Tah18p-dependent nitric oxide synthesis confers high-temperature stress tolerance; possible target for development of antifungal drugs","termid":"PBO:0082821"}


id: FYPO:0004155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein tyrosine phosphorylation during mitotic G1 phase (obsolete FYPO:0004155)","synonyms":[{"name":"increased peptidyl-tyrosine phosphorylation during mitotic G1 phase","type":"exact"},{"name":"increased protein tyrosine phosphorylation during cellular response to heat during G1 phase during vegetative growth","type":"exact"},{"name":"increased protein tyrosine phosphorylation during cellular response to heat during G1 phase of mitotic cell cycle","type":"exact"},{"name":"increased tyrosine phosphorylation during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0004155"}


id: GO:0004383
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate.","definition_xrefs":["EC:4.6.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0009975","GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"guanylate cyclase activity","secondary_identifiers":["MetaCyc:GUANYLCYC-RXN","Reactome:R-HSA-392152","RHEA:13665","Reactome:R-HSA-74885"],"synonyms":[{"name":"GTP diphosphate-lyase (cyclizing) activity","type":"related"},{"name":"GTP diphosphate-lyase (cyclizing; 3',5'-cyclic-GMP-forming) activity","type":"related"},{"name":"guanyl cyclase activity","type":"related"},{"name":"guanylyl cyclase activity","type":"exact"},{"name":"receptor guanylate cyclase activity","type":"narrow"}],"termid":"GO:0004383"}


id: GO:0072377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein activation cascade that contributes to blood coagulation and consists of events leading from the formation of activated factor X to the formation of active thrombin, the cleavage of fibrinogen by thrombin, and the formation of cleaved fibrin into a stable multimeric, cross-linked complex.","definition_xrefs":["GOC:add","PMID:1931959","GOC:mah","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein activation cascade","termid":"GO:0072376"},{"relation_name":"part_of","term_name":"blood coagulation, fibrin clot formation","termid":"GO:0072378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"blood coagulation, common pathway","termid":"GO:0072377"}


id: GO:0048133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The self-renewing division of a germline stem cell in the male gonad, to produce a daughter stem cell and a daughter germ cell, which will divide to form the male gametes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germline stem cell asymmetric division","termid":"GO:0098728"},{"relation_name":"part_of","term_name":"spermatogenesis","termid":"GO:0007283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male germ-line stem cell asymmetric division","synonyms":[{"name":"male germ-line stem cell renewal","type":"exact"}],"termid":"GO:0048133"}


id: PBO:0052955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KxDL motif containing 1","termid":"PBO:0052955"}


id: GO:0072178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the nephric duct are generated and organized. A nephric duct is a tube that drains a primitive kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial tube morphogenesis","termid":"GO:0060562"},{"relation_name":"part_of","term_name":"nephric duct development","termid":"GO:0072176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephric duct morphogenesis","termid":"GO:0072178"}


id: PBO:0080493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor C domain containing 2 like","termid":"PBO:0080493"}


id: PBO:0040643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 associated X, apoptosis regulator","termid":"PBO:0040643"}


id: GO:0042887
data:
  {"annotated_genes":["SJAG_00922","SJAG_05182","SJAG_02779","SJAG_03503","SJAG_02125","SJAG_04725","SJAG_03577","SJAG_01344","SJAG_01983","SJAG_05175","SJAG_02029","SJAG_02780","SJAG_02602","SJAG_02139","SJAG_01660","SJAG_04325","SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015421"},{"annotations":[114270,93121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044604"},{"annotations":[102749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008521"},{"annotations":[70833,88108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015225"},{"annotations":[88109,70831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901604"},{"annotations":[114413,99078,114412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071916"},{"annotations":[103618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008517"},{"annotations":[109204,91589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034634"},{"annotations":[98868,106076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015182"},{"annotations":[104343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015233"},{"annotations":[104039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901584"},{"annotations":[99079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042937"},{"annotations":[103135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015204"}]},"cv_name":"molecular_function","definition":"Enables the transfer of an amide, any compound containing one, two, or three acyl groups attached to a nitrogen atom, from one side of a membrane to the other.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00922":null,"SJAG_01344":null,"SJAG_01660":null,"SJAG_01983":null,"SJAG_02029":null,"SJAG_02125":null,"SJAG_02139":null,"SJAG_02602":null,"SJAG_02779":null,"SJAG_02780":null,"SJAG_03497":null,"SJAG_03503":null,"SJAG_03577":null,"SJAG_04325":null,"SJAG_04725":null,"SJAG_05175":null,"SJAG_05182":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"amide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"amine/amide/polyamine channel activity","type":"narrow"}],"termid":"GO:0042887","terms_by_termid":{"GO:0008517":null,"GO:0008521":null,"GO:0015182":null,"GO:0015204":null,"GO:0015225":null,"GO:0015233":null,"GO:0015421":null,"GO:0034634":null,"GO:0042937":null,"GO:0044604":null,"GO:0071916":null,"GO:1901584":null,"GO:1901604":null}}


id: PBO:0044394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily C member 19","termid":"PBO:0044394"}


id: PBO:0070184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 102 pseudogene","termid":"PBO:0070184"}


id: PR:O13897
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22A12.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized hydrolase C22A12.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.06c","synonyms":[{"name":"Spom972h-SPAC22A12.06c","type":"exact"}],"termid":"PR:O13897"}


id: PBO:0059603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 15","termid":"PBO:0059603"}


id: SO:0000306
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A nucleotide modified by methylation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_DNA_base","termid":"SO:0000305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylated_DNA_base_feature","synonyms":[{"name":"methylated base feature","type":"exact"}],"termid":"SO:0000306"}


id: GO:0042546
data:
  {"annotated_genes":["SJAG_01290","SJAG_00218","SJAG_03123","SJAG_01171","SJAG_04666","SJAG_04868","SJAG_02192","SJAG_00974","SJAG_05285","SJAG_01321","SJAG_03587","SJAG_04184","SJAG_01835","SJAG_04878","SJAG_00610","SJAG_01426","SJAG_03705","SJAG_03057","SJAG_02727","SJAG_00424","SJAG_00661","SJAG_04851","SJAG_01288","SJAG_04771","SJAG_04789","SJAG_00876","SJAG_04850","SJAG_00096","SJAG_01453","SJAG_03483","SJAG_02916","SJAG_04238","SJAG_02684","SJAG_03013","SJAG_01963","SJAG_01028","SJAG_04668","SJAG_02278","SJAG_05272","SJAG_04483","SJAG_03646","SJAG_00310","SJAG_05001","SJAG_04236","SJAG_02222","SJAG_01029","SJAG_04073","SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90522],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[87817,113852,84770,86308,84280],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[105351],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[105127,113853,113862,100235,110148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070591"},{"annotations":[105128,100236,85209,110448,113863],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070600"},{"annotations":[87643,87632,84137,105353,109230,102147,103831,111889],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071970"},{"annotations":[98703,104667],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070880"},{"annotations":[91160,104123,98004,98003],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070879"},{"annotations":[98518,90110,91311,98315,102148,113855,113977,87644,98316,98306,98907,100066,114837,89386,96680,88450,114061,110449,114403,83589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009272"},{"annotations":[102149],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051278"},{"annotations":[83591,88467],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[88473,98913,85504,90995],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"},{"annotations":[88474,88755,96240,98214],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032995"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cell wall. Includes biosynthesis of constituent macromolecules, such as proteins and polysaccharides, and those macromolecular modifications that are involved in synthesis or assembly of the cellular component. A cell wall is the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis.","definition_xrefs":["ISBN:0198506732","GOC:jl","GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component biogenesis","termid":"GO:0044085"},{"relation_name":"is_a","term_name":"cell wall organization or biogenesis","termid":"GO:0071554"}],"gene_count":48,"genes_by_uniquename":{"SJAG_00096":null,"SJAG_00218":null,"SJAG_00310":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_00876":null,"SJAG_00974":null,"SJAG_01028":null,"SJAG_01029":null,"SJAG_01171":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01321":null,"SJAG_01426":null,"SJAG_01453":null,"SJAG_01835":null,"SJAG_01963":null,"SJAG_02192":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02684":null,"SJAG_02727":null,"SJAG_02916":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03123":null,"SJAG_03483":null,"SJAG_03587":null,"SJAG_03646":null,"SJAG_03705":null,"SJAG_04073":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04483":null,"SJAG_04551":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_04789":null,"SJAG_04850":null,"SJAG_04851":null,"SJAG_04868":null,"SJAG_04878":null,"SJAG_05001":null,"SJAG_05272":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"cell wall biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell wall assembly","type":"narrow"}],"termid":"GO:0042546","terms_by_termid":{"GO:0009272":null,"GO:0030476":null,"GO:0032995":null,"GO:0034412":null,"GO:0034413":null,"GO:0051278":null,"GO:0070591":null,"GO:0070600":null,"GO:0070610":null,"GO:0070879":null,"GO:0070880":null,"GO:0071970":null,"GO:0140748":null}}


