# terms

id: PBO:0047639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 1A pseudogene 2","termid":"PBO:0047639"}


id: GO:1902742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that is involved in anatomical structure development.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","GOC:mtg_apoptosis","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"},{"relation_name":"part_of","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in development","synonyms":[{"name":"activation of apoptosis involved in anatomical structure development","type":"narrow"},{"name":"activation of apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"apoptosis activator activity involved in anatomical structure development","type":"related"},{"name":"apoptosis activator activity involved in development of an anatomical structure","type":"related"},{"name":"apoptosis involved in anatomical structure development","type":"narrow"},{"name":"apoptosis involved in development of an anatomical structure","type":"narrow"},{"name":"apoptosis signaling involved in anatomical structure development","type":"narrow"},{"name":"apoptosis signaling involved in development of an anatomical structure","type":"narrow"},{"name":"apoptotic cell death involved in anatomical structure development","type":"exact"},{"name":"apoptotic cell death involved in development of an anatomical structure","type":"exact"},{"name":"apoptotic process involved in anatomical structure development","type":"exact"},{"name":"apoptotic process involved in development of an anatomical structure","type":"exact"},{"name":"apoptotic program involved in anatomical structure development","type":"narrow"},{"name":"apoptotic program involved in development of an anatomical structure","type":"narrow"},{"name":"apoptotic programmed cell death involved in anatomical structure development","type":"exact"},{"name":"apoptotic programmed cell death involved in development of an anatomical structure","type":"exact"},{"name":"commitment to apoptosis involved in anatomical structure development","type":"related"},{"name":"commitment to apoptosis involved in development of an anatomical structure","type":"related"},{"name":"induction of apoptosis by p53 involved in anatomical structure development","type":"related"},{"name":"induction of apoptosis by p53 involved in development of an anatomical structure","type":"related"},{"name":"induction of apoptosis involved in anatomical structure development","type":"related"},{"name":"induction of apoptosis involved in development of an anatomical structure","type":"related"},{"name":"programmed cell death by apoptosis involved in anatomical structure development","type":"exact"},{"name":"programmed cell death by apoptosis involved in development of an anatomical structure","type":"exact"},{"name":"signaling (initiator) caspase activity involved in anatomical structure development","type":"related"},{"name":"signaling (initiator) caspase activity involved in development of an anatomical structure","type":"related"},{"name":"type I programmed cell death involved in anatomical structure development","type":"narrow"},{"name":"type I programmed cell death involved in development of an anatomical structure","type":"narrow"}],"termid":"GO:1902742"}


id: PBO:0079236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 9B","termid":"PBO:0079236"}


id: PBO:0030597
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_substance_in_cytosol","termid":"PBO:0030597"}


id: GO:0140785
data:
  {"annotated_genes":["SJAG_03405"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140786"}]},"cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of an amino acid.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule sensor activity","termid":"GO:0140299"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03405":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"}],"interesting_parent_ids":["GO:0003674","GO:0140299"],"is_obsolete":false,"name":"amino acid sensor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"amino acid sensing activity","type":"exact"}],"termid":"GO:0140785","terms_by_termid":{"GO:0140786":null}}


id: PBO:0039320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate 5-lipoxygenase activating protein","termid":"PBO:0039320"}


id: PBO:0029343
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_tRNA_3'-end_processing","termid":"PBO:0029343"}


id: GO:0050257
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-glucose 1-phosphate + riboflavin = D-glucose + FMN.","definition_xrefs":["RHEA:20409","EC:2.7.1.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"riboflavin phosphotransferase activity","secondary_identifiers":["KEGG_REACTION:R00550","MetaCyc:RIBOFLAVIN-PHOSPHOTRANSFERASE-RXN"],"synonyms":[{"name":"D-glucose-1-phosphate:riboflavin 5'-phosphotransferase activity","type":"related"},{"name":"G-1-P phosphotransferase activity","type":"related"},{"name":"alpha-D-glucose-1-phosphate:riboflavin 5'-phosphotransferase activity","type":"related"},{"name":"riboflavine phosphotransferase activity","type":"related"}],"termid":"GO:0050257"}


id: GO:1903585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone deubiquitination.","definition_xrefs":["GOC:TermGenie","PMID:24526689","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone deubiquitination (obsolete GO:1903585)","synonyms":[{"name":"down regulation of histone deubiquitination","type":"exact"},{"name":"down regulation of histone deubiquitinylation","type":"exact"},{"name":"down regulation of histone deubiquitylation","type":"exact"},{"name":"down-regulation of histone deubiquitination","type":"exact"},{"name":"down-regulation of histone deubiquitinylation","type":"exact"},{"name":"down-regulation of histone deubiquitylation","type":"exact"},{"name":"downregulation of histone deubiquitination","type":"exact"},{"name":"downregulation of histone deubiquitinylation","type":"exact"},{"name":"downregulation of histone deubiquitylation","type":"exact"},{"name":"inhibition of histone deubiquitination","type":"narrow"},{"name":"inhibition of histone deubiquitinylation","type":"narrow"},{"name":"inhibition of histone deubiquitylation","type":"narrow"},{"name":"negative regulation of histone deubiquitinylation","type":"exact"},{"name":"negative regulation of histone deubiquitylation","type":"exact"}],"termid":"GO:1903585"}


id: GO:0070689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-threonine (the L-enantiomer of 2-amino-3-hydroxybutyric acid) to form the compound propionate.","definition_xrefs":["GOC:mah","GOC:bf","MetaCyc:PWY-5437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"threonine catabolic process","termid":"GO:0006567"},{"relation_name":"is_a","term_name":"propionate metabolic process","termid":"GO:0019541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0006629","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"L-threonine catabolic process to propionate","synonyms":[{"name":"L-threonine breakdown to propionate","type":"exact"},{"name":"L-threonine catabolism to propionate","type":"exact"},{"name":"L-threonine degradation to propionate","type":"exact"},{"name":"threonine catabolic process to propionate","type":"broad"}],"termid":"GO:0070689"}


id: PBO:0078077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAM2 antisense RNA 1 (head to head)","termid":"PBO:0078077"}


id: GO:0006352
data:
  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initial step of transcription, consisting of the assembly of the RNA polymerase preinitiation complex (PIC) at a gene promoter, as well as the formation of the first few bonds of the RNA transcript. 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id: PBO:0067807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 109","termid":"PBO:0067807"}


id: PBO:0067288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 371, pseudogene","termid":"PBO:0067288"}


id: PBO:0065133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein activator of interferon induced protein kinase EIF2AK2","termid":"PBO:0065133"}


id: PBO:0063863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piezo type mechanosensitive ion channel component 1 pseudogene 2","termid":"PBO:0063863"}


id: PBO:0067465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 592, pseudogene","termid":"PBO:0067465"}


id: FYPO:0005329
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the repair of pyrimidine-pyrimidone 6-4 photoproducts by error-free translesion synthesis is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:20453833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal error-free translesion synthesis","termid":"FYPO:0005325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000298","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal error-free translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts","synonyms":[{"name":"normal error-free translesion synthesis across TT(6-4)","type":"exact"},{"name":"normal error-free translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts during mitotic cell cycle","type":"related"},{"name":"normal error-free translesion synthesis of pyrimidine-pyrimidone 6-4 photoproducts during vegetative growth","type":"exact"}],"termid":"FYPO:0005329"}


id: PBO:0066601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member T1","termid":"PBO:0066601"}


id: PBO:0076578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3 pseudogene 6","termid":"PBO:0076578"}


id: GO:0016098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving monoterpenoid compounds, terpenoids having a C10 skeleton.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"monoterpenoid metabolic process","synonyms":[{"name":"monoterpenoid metabolism","type":"exact"}],"termid":"GO:0016098"}


id: PBO:0043214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC28 protein kinase regulatory subunit 1B pseudogene 7","termid":"PBO:0043214"}


id: PBO:0112873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lincRNA regulator of IL2RA","termid":"PBO:0112873"}


id: PBO:0059651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 17","termid":"PBO:0059651"}


id: PBO:0067078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 110, pseudogene","termid":"PBO:0067078"}


id: GO:0006523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of alanine, 2-aminopropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine metabolic process","termid":"GO:0006522"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"alanine biosynthetic process","synonyms":[{"name":"alanine anabolism","type":"exact"},{"name":"alanine biosynthesis","type":"exact"},{"name":"alanine formation","type":"exact"},{"name":"alanine synthesis","type":"exact"}],"termid":"GO:0006523"}


id: PR:O43049
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein phosphatase 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein phosphatase T (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3F6.01c","secondary_identifiers":["UniProtKB:O43049"],"synonyms":[{"name":"PPT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPP5C","type":"exact"}],"termid":"PR:O43049"}


id: GO:0002524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An inflammatory response to an exogenous environmental antigen or an endogenous antigen initiated by the adaptive immune system.","definition_xrefs":["ISBN:0781735149","GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute inflammatory response to antigenic stimulus","termid":"GO:0002438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypersensitivity","secondary_identifiers":["Wikipedia:Hypersensitivity"],"synonyms":[{"name":"hypersensitivity response","type":"related"}],"termid":"GO:0002524"}


id: GO:1900134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of renin secretion into blood stream.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein secretion","termid":"GO:0050709"},{"relation_name":"is_a","term_name":"regulation of renin secretion into blood stream","termid":"GO:1900133"},{"relation_name":"negatively_regulates","term_name":"renin secretion into blood stream","termid":"GO:0002001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of renin secretion into blood stream","synonyms":[{"name":"down regulation of renin release into blood stream","type":"exact"},{"name":"down regulation of renin secretion into blood stream","type":"exact"},{"name":"down-regulation of renin release into blood stream","type":"exact"},{"name":"down-regulation of renin secretion into blood stream","type":"exact"},{"name":"downregulation of renin release into blood stream","type":"exact"},{"name":"downregulation of renin secretion into blood stream","type":"exact"},{"name":"inhibition of renin release into blood stream","type":"narrow"},{"name":"inhibition of renin secretion into blood stream","type":"narrow"},{"name":"negative regulation of renin release into blood stream","type":"exact"}],"termid":"GO:1900134"}


id: PBO:0041116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain specific homeobox","termid":"PBO:0041116"}


id: PBO:0005875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"15S rRNA","termid":"PBO:0005875"}


id: GO:0048586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of long-day photoperiodism, where the response associated with the photoperiodism is flowering. Flowering is defined by the switch from the vegetative to the reproductive phase.","definition_xrefs":["GOC:pj","ISBN:0582015952","ISBN:0697037754","GOC:jid","ISBN:0709408862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photoperiodism, flowering","termid":"GO:2000028"},{"relation_name":"regulates","term_name":"long-day photoperiodism, flowering","termid":"GO:0048574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of long-day photoperiodism, flowering","termid":"GO:0048586"}


id: PBO:0044291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome X open reading frame 66","termid":"PBO:0044291"}


id: PBO:0074304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLX4 structure-specific endonuclease subunit","termid":"PBO:0074304"}


id: PBO:0027393
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_phospholipid:diacylglycerol_acyltransferase_activity","termid":"PBO:0027393"}


id: PBO:0081100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger E-box binding homeobox 1","termid":"PBO:0081100"}


id: PBO:0079912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 pseudogene 2","termid":"PBO:0079912"}


id: PR:O60149
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps38 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 38 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.19","synonyms":[{"name":"Spom972h-vps38","type":"exact"}],"termid":"PR:O60149"}


id: FYPO:0000080
data:
  {"alleles_by_uniquename":{"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_03198:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03198","name":"oar2delta","uniquename":"SJAG_03198:allele-1"},"SJAG_03198:allele-2":{"allele_type":"amino_acid_mutation","description":"Y189D cold sensitive","gene_uniquename":"SJAG_03198","name":"oar2-51","uniquename":"SJAG_03198:allele-2"},"SJAG_03198:allele-3":{"allele_type":"amino_acid_mutation","description":"R72A,L75A,R106A,L109A","gene_uniquename":"SJAG_03198","name":"oar2-dm12","synonyms":[{"name":"destruction box mutations","reference":"PMID:23786411","type":"exact"}],"uniquename":"SJAG_03198:allele-3"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115483,115567,115568,115569,115583],"is_not":false,"summary":null,"term":"FYPO:0000080"}]},"cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal at a low temperature.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01946":null,"SJAG_03198":null,"SJAG_05207":null},"genotype_count":5,"genotypes_by_uniquename":{"cem1delta":{"display_name":"cem1delta","display_uniquename":"cem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01946:allele-1","expression":"Null"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression":{"display_name":"oar2-51(Y189D cold sensitive)[Overexpression]","display_uniquename":"oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-2","expression":"Overexpression"}]}]},"oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression":{"display_name":"oar2-dm12(R72A,L75A,R106A,L109A aa)[Overexpression]","display_uniquename":"oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-3","expression":"Overexpression"}]}]},"oar2delta":{"display_name":"oar2delta","display_uniquename":"oar2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002057","FYPO:0002058","FYPO:0002060","FYPO:0000139","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"decreased cell population growth at low temperature","references_by_uniquename":{"PMID:23786411":null,"PMID:32243490":null},"secondary_identifiers":["FYPO:0002175"],"single_locus_annotated_genes":["SJAG_01946","SJAG_05207","SJAG_03198"],"single_locus_genotype_uniquenames":["cem1delta","oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-overexpression","oar2delta","cmp7delta","oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression"],"synonyms":[{"name":"cold sensitive","type":"related"},{"name":"cold sensitivity: increased","type":"related"},{"name":"decreased growth at low temperature","type":"broad"},{"name":"decreased vegetative cell population growth at low temperature","type":"exact"},{"name":"growth defect, slow growth at low temperatures","type":"related"},{"name":"hypersensitive to cold","type":"related"},{"name":"reduced growth at low temperature","type":"related"},{"name":"sensitive to cold","type":"related"},{"name":"sensitive to cold during mitotic cell cycle","type":"related"},{"name":"sensitive to cold during vegetative growth","type":"exact"},{"name":"slow growth at low temperature","type":"related"}],"termid":"FYPO:0000080","terms_by_termid":{"FYECO:0000006":null,"FYECO:0000137":null,"FYPO:0000080":null,"FYPO_EXT:0000001":null}}


id: GO:0035966
data:
  {"annotated_genes":["SJAG_00681","SJAG_04262","SJAG_03611","SJAG_00270","SJAG_00173","SJAG_04118","SJAG_00219","SJAG_04283","SJAG_00226","SJAG_03345","SJAG_01160","SJAG_04471","SJAG_05022","SJAG_01737","SJAG_00790","SJAG_03841","SJAG_04435","SJAG_01516","SJAG_00530","SJAG_02341","SJAG_00054","SJAG_03815","SJAG_02601","SJAG_02419","SJAG_04103","SJAG_00564","SJAG_01556","SJAG_04567","SJAG_04187","SJAG_01858","SJAG_01768","SJAG_00552","SJAG_00403","SJAG_04612","SJAG_03657","SJAG_03482"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84143,106055,101257,106056,100273,108351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071218"},{"annotations":[98989,106057,106058],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034620"},{"annotations":[109688,106386,105692,104057,105796],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071629"},{"annotations":[90554,89599,85730,94772,105615,103228,109876,112859,88998,113303,112100,110276,110143,113459,97295],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030968"},{"annotations":[85323,83866,109052,99473],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180027"},{"annotations":[89143,85582],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036498"},{"annotations":[84398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034514"},{"annotations":[86476,106912],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071630"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a protein that is not folded in its correct three-dimensional structure.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00054":null,"SJAG_00173":null,"SJAG_00219":null,"SJAG_00226":null,"SJAG_00270":null,"SJAG_00403":null,"SJAG_00530":null,"SJAG_00552":null,"SJAG_00564":null,"SJAG_00681":null,"SJAG_00790":null,"SJAG_01160":null,"SJAG_01516":null,"SJAG_01556":null,"SJAG_01737":null,"SJAG_01768":null,"SJAG_01858":null,"SJAG_02341":null,"SJAG_02419":null,"SJAG_02601":null,"SJAG_03345":null,"SJAG_03482":null,"SJAG_03611":null,"SJAG_03657":null,"SJAG_03815":null,"SJAG_03841":null,"SJAG_04103":null,"SJAG_04118":null,"SJAG_04187":null,"SJAG_04262":null,"SJAG_04283":null,"SJAG_04435":null,"SJAG_04471":null,"SJAG_04567":null,"SJAG_04612":null,"SJAG_05022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to topologically incorrect protein","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to misfolded or unfolded protein","type":"related"}],"termid":"GO:0035966","terms_by_termid":{"GO:0030968":null,"GO:0034514":null,"GO:0034620":null,"GO:0036498":null,"GO:0071218":null,"GO:0071629":null,"GO:0071630":null,"GO:0180027":null}}


id: GO:0010047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process leading to the spontaneous opening of the fruit permitting the escape of seeds.","definition_xrefs":["GOC:tb","ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dehiscence","termid":"GO:0009900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fruit dehiscence","termid":"GO:0010047"}


id: GO:0015076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of heavy metal ions into, out of or within a cell, or between cells. Heavy metals are those that can form a coordination bond with a protein, as opposed to an alkali or alkaline-earth metal that can only form an ionic bond; this definition includes the following biologically relevant heavy metals: Cd, Co, Cu, Fe, Hg, Mn, Mo, Ni, V, W, Zn.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete heavy metal ion transporter activity (obsolete GO:0015076)","synonyms":[{"name":"heavy metal ion transporter activity","type":"exact"}],"termid":"GO:0015076"}


id: GO:0050761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving depsipeptides, a linear or cyclic compound composed of both amino acids and hydroxy acids in peptide and ester bonds respectively.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"depsipeptide metabolic process","synonyms":[{"name":"depsipeptide metabolism","type":"exact"}],"termid":"GO:0050761"}


id: PBO:0080259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 22 pseudogene","termid":"PBO:0080259"}


id: PBO:0001997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein Erj5 (predicted)","termid":"PBO:0001997"}


id: FYPO:0001330
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115635,115633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115634,115636],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004573"}],"single_locus_phenotype":[{"annotations":[115174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004695"},{"annotations":[115173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002227"},{"annotations":[115621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004982"},{"annotations":[115586,115585,115587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001327"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of a specific substance measured in a cell is higher than normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell","termid":"FYPO:0000990"},{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_01956":null,"SJAG_02621":null,"SJAG_03118":null,"SJAG_03198":null,"SJAG_03351":null,"SJAG_03575":null,"SJAG_03689":null},"genotype_count":7,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02621","SJAG_03689","SJAG_03118"],"name":"increased level of substance in cell during vegetative growth","references_by_uniquename":{"PMID:23786411":null,"PMID:25318672":null,"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_01956","SJAG_03351","SJAG_03689","SJAG_00426","SJAG_03575"],"single_locus_genotype_uniquenames":["dcr1delta","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased accumulation of substance in cell during vegetative growth","type":"related"},{"name":"increased level of substance in cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001330","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0001327":null,"FYPO:0002227":null,"FYPO:0004573":null,"FYPO:0004695":null,"FYPO:0004982":null}}


id: FYPO:0007288
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein galactosylation is normal (i.e. indistinguishable from wild type). Protein galactosylation is the addition of a galactose residue to a protein amino acid.","definition_xrefs":["GO:0042125","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein glycosylation during vegetative growth","termid":"FYPO:0001909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein galactosylation during vegetative growth","synonyms":[{"name":"normal protein galactosylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007288"}


id: PBO:0071251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 92","termid":"PBO:0071251"}


id: PR:Q10262
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug115 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 115 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.14c","synonyms":[{"name":"Spom972h-mug115","type":"exact"}],"termid":"PR:Q10262"}


id: GO:0035134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring after embryonic development, by which the anatomical structures of the dorsal fin are generated and organized. A dorsal fin is an unpaired medial fin on the dorsal aspect of a fish that provides lateral stability while swimming. Generally fish have one or two dorsal fins.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic medial fin morphogenesis","termid":"GO:0035132"},{"relation_name":"is_a","term_name":"dorsal fin morphogenesis","termid":"GO:0035142"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic dorsal fin morphogenesis","termid":"GO:0035134"}


id: GO:2001006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellulose biosynthetic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of beta-glucan biosynthetic process","termid":"GO:0032951"},{"relation_name":"regulates","term_name":"cellulose biosynthetic process","termid":"GO:0030244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of cellulose biosynthetic process","synonyms":[{"name":"regulation of cellulose anabolism","type":"exact"},{"name":"regulation of cellulose biosynthesis","type":"exact"},{"name":"regulation of cellulose formation","type":"exact"},{"name":"regulation of cellulose synthesis","type":"exact"}],"termid":"GO:2001006"}


id: PBO:0028061
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_during_mitotic_G2_phase","termid":"PBO:0028061"}


id: PBO:0084781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial peroxiredoxin with thioredoxin peroxidase activity; has a role in reduction of hydroperoxides; reactivation requires Trr2p and glutathione; induced during respiratory growth and oxidative stress; phosphorylated; protein abundance increases in response to DNA replication stress","termid":"PBO:0084781"}


id: PBO:0077006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 8","termid":"PBO:0077006"}


id: PBO:0056796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifunctional ROCO family signaling regulator 1","termid":"PBO:0056796"}


id: PATO:0000731
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000731 body position value (obsolete PATO:0000731)","termid":"PATO:0000731"}


id: PBO:0067357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 455, pseudogene","termid":"PBO:0067357"}


id: RO:0002570
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is a conduit for y iff y overlaps through the lumen_of of x, and y has parts on either side of the lumen of x.","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conduit_for","termid":"RO:0002570"}


id: GO:0004344
data:
  {"annotated_genes":["SJAG_02148"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047935"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucose + acceptor = D-glucono-1,5-lactone + reduced acceptor.","definition_xrefs":["PMID:22027299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02148":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glucose dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.1.99.35","GO:0008708","RHEA:24540"],"synonyms":[{"name":"glucose dehydrogenase (acceptor) activity","type":"exact"},{"name":"soluble glucose dehydrogenase","type":"exact"}],"termid":"GO:0004344","terms_by_termid":{"GO:0047935":null}}


id: FYPO:0006606
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally dynamically localized to a specific place in the cell shows an abnormal temporal pattern of localization. For example, a protein may move to or from the location more or less frequently than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal dynamic protein localization pattern","synonyms":[{"name":"abnormal dynamic pattern of protein localization","type":"exact"},{"name":"abnormal dynamic protein localisation pattern","type":"exact"},{"name":"abnormal protein exchange","type":"exact"},{"name":"abnormal protein turnover","type":"exact"},{"name":"abnormal temporal protein localization pattern","type":"related"}],"termid":"FYPO:0006606"}


id: GO:0090280
data:
  {"annotated_genes":["SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the directed movement of calcium ions into a cell or organelle.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion transport","termid":"GO:0051928"},{"relation_name":"is_a","term_name":"regulation of calcium ion import","termid":"GO:0090279"},{"relation_name":"positively_regulates","term_name":"calcium ion import","termid":"GO:0070509"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of calcium ion import","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of transmembrane calcium influx","type":"related"}],"termid":"GO:0090280","terms_by_termid":{"GO:1905665":null}}


id: GO:1990206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: jasmonyl-Ile + H2O = jasmonic acid + L-isoleucine.","definition_xrefs":["PMID:23943861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"jasmonyl-Ile conjugate hydrolase activity","synonyms":[{"name":"JA-Ile hydrolase","type":"related"}],"termid":"GO:1990206"}


id: PBO:0085808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; encoded within an intron of the mitochondrial COX1 gene; translational initiation codon is predicted to be ATA rather than ATG","termid":"PBO:0085808"}


id: PBO:0075703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serum response factor","termid":"PBO:0075703"}


id: PBO:0042885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP298-TCP10L readthrough","termid":"PBO:0042885"}


id: PBO:0041248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 146","termid":"PBO:0041248"}


id: PBO:0075116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 165","termid":"PBO:0075116"}


id: PBO:0048064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 13","termid":"PBO:0048064"}


id: FYPO:0008278
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 5-diphospho-1D-myo-inositol 1,2,3,4,6-pentakisphosphate (5-IP7) is higher than normal.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular myo-inositol level","termid":"FYPO:0006950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular 5-IP7 level","termid":"FYPO:0008278"}


id: FYECO:0000201
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing peptone, yeast extract and other components. The concentration of glucose is typically around 2-3%. Note that peptone, which is a mixture of nutrients generated by proteolytic digestion of animal protein with trypsin, is not normally a component of S. pombe rich media (it is however normally present in S. cerevisiae rich media).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YPD","synonyms":[{"name":"glucose rich medium, peptone/YE nitrogen source","type":"broad"}],"termid":"FYECO:0000201"}


id: GO:0043574
data:
  {"annotated_genes":["SJAG_03781","SJAG_04428","SJAG_05950","SJAG_02997","SJAG_00702","SJAG_03324","SJAG_04763","SJAG_02619","SJAG_03440","SJAG_02797","SJAG_02693","SJAG_00891","SJAG_00326","SJAG_04857","SJAG_05315","SJAG_01165","SJAG_01854","SJAG_02034"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98326,92535,101286,94295,86285,86489,106097,107452,62907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016558"},{"annotations":[93023,99157,107914],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016560"},{"annotations":[94635,97364,113383,111371],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016562"},{"annotations":[91488,107453,86481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045046"}]},"cv_name":"biological_process","definition":"Transport of substances into, out of or within a peroxisome, a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_00891":null,"SJAG_01165":null,"SJAG_01854":null,"SJAG_02034":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02797":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03781":null,"SJAG_04428":null,"SJAG_04763":null,"SJAG_04857":null,"SJAG_05315":null,"SJAG_05950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"peroxisomal transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0043574","terms_by_termid":{"GO:0016558":null,"GO:0016560":null,"GO:0016562":null,"GO:0045046":null}}


id: PBO:0034440
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_Rad52_focus_presence_during_cellular_response_to_ionizing_radiation","termid":"PBO:0034440"}


id: GO:0034769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled breakdown of the basement membrane in the context of a normal process such as imaginal disc eversion.","definition_xrefs":["PMID:17301221","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix disassembly","termid":"GO:0022617"},{"relation_name":"is_a","term_name":"basement membrane organization","termid":"GO:0071711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basement membrane disassembly","secondary_identifiers":["GO:0060881"],"synonyms":[{"name":"basal lamina disassembly","type":"related"}],"termid":"GO:0034769"}


id: GO:0043160
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed within the acrosome membrane.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule lumen","termid":"GO:0034774"},{"relation_name":"is_a","term_name":"lysosomal lumen","termid":"GO:0043202"},{"relation_name":"part_of","term_name":"acrosomal vesicle","termid":"GO:0001669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005773","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"acrosomal lumen","termid":"GO:0043160"}


id: PBO:0053920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1217","termid":"PBO:0053920"}


id: PBO:0086852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative Rheb-related GTPase; involved in regulating canavanine resistance and arginine uptake; member of the Ras superfamily of G-proteins","termid":"PBO:0086852"}


id: GO:0050376
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucosamine = UDP-galactosamine.","definition_xrefs":["EC:5.1.3.16","MetaCyc:UDP-GLUCOSAMINE-EPIMERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"UDP-glucosamine 4-epimerase activity","secondary_identifiers":["RHEA:23492"],"synonyms":[{"name":"UDP-glucosamine epimerase activity","type":"exact"},{"name":"UDPglucosamine 4-epimerase activity","type":"related"}],"termid":"GO:0050376"}


id: PBO:0050021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DP alpha 2 (pseudogene)","termid":"PBO:0050021"}


id: GO:0009293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of horizontal gene transfer in which genetic material is introduced into a cell mediated by a virus.","definition_xrefs":["PMID:33597173","PMID:18265289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"horizontal gene transfer","termid":"GO:0009292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transduction","secondary_identifiers":["Wikipedia:Transduction_(genetics)"],"termid":"GO:0009293"}


id: PATO:0000407
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's having a horizontal surface without a slope, tilt, or curvature.","definition_xrefs":["web:http://www.merriam-webster.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flattened","termid":"PATO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flat","synonyms":[{"name":"plate-like","type":"related"}],"termid":"PATO:0000407"}


id: FYPO:0008190
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to chromatin at the centromere central core is increased during the meiotic prophase I.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to chromatin at centromere central core during meiotic prophase I","termid":"FYPO:0008190"}


id: PBO:0069913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1205, pseudogene","termid":"PBO:0069913"}


id: GO:0047629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP + H2O = IDP + NH3.","definition_xrefs":["MetaCyc:ADP-DEAMINASE-RXN","EC:3.5.4.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine-phosphate deaminase activity","termid":"GO:0047623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"ADP deaminase activity","secondary_identifiers":["RHEA:12741"],"synonyms":[{"name":"ADP aminohydrolase activity","type":"related"},{"name":"adenosine diphosphate deaminase activity","type":"related"},{"name":"adenosinepyrophosphate deaminase activity","type":"related"}],"termid":"GO:0047629"}


id: PBO:0075077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 127","termid":"PBO:0075077"}


id: GO:0002124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Aggressive behavior performed in defence of a fixed area against intruders, typically conspecifics.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aggressive behavior","termid":"GO:0002118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"territorial aggressive behavior","synonyms":[{"name":"territorial aggression","type":"exact"}],"termid":"GO:0002124"}


id: PR:O14318
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- php4 gene.","definition_xrefs":["UniProtKB:O14318","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT-binding factor complex subunit php4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.01c","synonyms":[{"name":"Spom972h-php4","type":"exact"}],"termid":"PR:O14318"}


id: PBO:0060148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation release factor 1","termid":"PBO:0060148"}


id: PR:U3H040
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC18E5.09c gene.","definition_xrefs":["UniProtKB:U3H040","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein SPBC18E5.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.09c","synonyms":[{"name":"Spom972h-SPBC18E5.09c","type":"exact"}],"termid":"PR:U3H040"}


id: PBO:0001029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geranylgeranyltransferase II beta subunit Ptb1","termid":"PBO:0001029"}


id: PATO:0002429
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of the letter X.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"x-shaped","termid":"PATO:0002429"}


id: PBO:0061293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal PAS domain protein 4","termid":"PBO:0061293"}


id: GO:0061221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a mesonephric mesenchymal tissue are generated and organized. Mesonephric mesenchyme is the tissue made up of loosely connected mesenchymal cells in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney mesenchyme morphogenesis","termid":"GO:0072131"},{"relation_name":"part_of","term_name":"mesonephric mesenchyme development","termid":"GO:0061219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric mesenchyme morphogenesis","termid":"GO:0061221"}


id: PBO:0034464
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_vacuole","termid":"PBO:0034464"}


id: PBO:0073336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 12","termid":"PBO:0073336"}


id: FYPO:0006899
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation after cytokinesis is abnormally asymmetric, i.e. cells separate asymmetrically by usually detaching one side of the new ends before the other. Normally, separate symmetrically by detaching both sides of the new ends from each other simultaneously.","definition_xrefs":["PMID:31116668","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell separation after cytokinesis","termid":"FYPO:0000164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"asymmetric cell separation after cytokinesis","synonyms":[{"name":"asymmetric cell separation after cytokinesis during mitotic cell cycle","type":"related"},{"name":"asymmetric cell separation after cytokinesis during vegetative growth","type":"exact"},{"name":"asymmetric mitotic cytokinetic cell separation","type":"exact"},{"name":"asymmetric septum digestion after cytokinesis","type":"exact"}],"termid":"FYPO:0006899"}


id: GO:0035650
data:
  {"annotated_genes":["SJAG_01381"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95767],"is_not":false,"summary":null,"term":"GO:0035650"}]},"cv_name":"molecular_function","definition":"Binding to an AP-1 adaptor complex. The AP-1 adaptor complex is a heterotetrameric AP-type membrane coat adaptor complex that consists of beta1, gamma, mu1 and sigma1 subunits and links clathrin to the membrane surface of a vesicle. In at least humans, the AP-1 complex can be heterogeneric due to the existence of multiple subunit isoforms encoded by different genes (gamma1 and gamma2, mu1A and mu1B, and sigma1A, sigma1B and sigma1C).","definition_xrefs":["PMID:21097499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01381":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"AP-1 adaptor complex binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0035650","terms_by_termid":{"GO:0035650":null}}


id: PBO:0043043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHODL antisense RNA 1","termid":"PBO:0043043"}


id: GO:0000494
data:
  {"annotated_genes":["SJAG_02350","SJAG_00943"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104147,106254],"is_not":false,"summary":null,"term":"GO:0000494"}]},"cv_name":"biological_process","definition":"Any process involved in forming the mature 3' end of a box C/D RNA molecule.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sno(s)RNA 3'-end processing","termid":"GO:0031126"},{"relation_name":"is_a","term_name":"box C/D sno(s)RNA processing","termid":"GO:0034963"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00943":null,"SJAG_02350":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016074"],"is_obsolete":false,"name":"box C/D sno(s)RNA 3'-end processing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"box C/D RNA 3' end processing","type":"exact"},{"name":"box C/D sRNA 3'-end processing","type":"narrow"},{"name":"box C/D snoRNA 3'-end processing","type":"narrow"}],"termid":"GO:0000494","terms_by_termid":{"GO:0000494":null}}


id: PBO:0041797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase recruitment domain family member 6","termid":"PBO:0041797"}


id: GO:0019885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002474"},{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous peptide antigen","termid":"GO:0002483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen via MHC class I","secondary_identifiers":["GO:0048004"],"synonyms":[{"name":"antigen presentation, endogenous peptide antigen","type":"broad"},{"name":"antigen processing, endogenous antigen via MHC class I","type":"broad"},{"name":"antigen processing, endogenous antigen via major histocompatibility complex class I","type":"broad"},{"name":"endogenous peptide antigen processing and presentation via MHC class I","type":"exact"}],"termid":"GO:0019885"}


id: GO:0008038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuronal cell in a multicellular organism interprets its surroundings.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell recognition","termid":"GO:0008037"},{"relation_name":"part_of","term_name":"neuron development","termid":"GO:0048666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron recognition","synonyms":[{"name":"neuronal cell recognition","type":"exact"}],"termid":"GO:0008038"}


id: PBO:0042894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement factor D","termid":"PBO:0042894"}


id: GO:0016635
data:
  {"annotated_genes":["SJAG_01671","SJAG_00197","SJAG_00260"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106430"},{"annotations":[84886,85251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008177"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a quinone or related compound.","definition_xrefs":["EC:1.3.5.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00260":null,"SJAG_01671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0016635","terms_by_termid":{"GO:0008177":null,"GO:0106430":null}}


id: PBO:0071526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 29","termid":"PBO:0071526"}


id: GO:0018443
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient phosphorylation of peptidyl-aspartic acid to form L-aspartic 4-phosphoric anhydride.","definition_xrefs":["RESID:AA0033"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via L-aspartic 4-phosphoric anhydride (obsolete GO:0018443)","termid":"GO:0018443"}


id: GO:0060112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process which controls the timing of the type of sexual cycle seen in female mammals.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"generation of ovulation cycle rhythm","synonyms":[{"name":"generation of estrus cycle rhythm","type":"exact"},{"name":"generation of menstrual cycle rhythm","type":"related"},{"name":"generation of oestrus cycle rhythm","type":"exact"}],"termid":"GO:0060112"}


id: PBO:0025508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Coa6 (predicted)","termid":"PBO:0025508"}


id: PBO:0047367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 20","termid":"PBO:0047367"}


id: PBO:0028409
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_superoxide_dismutase_activity","termid":"PBO:0028409"}


id: PBO:0053222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat LGI family member 2","termid":"PBO:0053222"}


id: FYPO:0002449
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer signal recognition particles (SRPs) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"signal recognition particles present in decreased numbers","synonyms":[{"name":"SRPs present in decreased numbers","type":"exact"},{"name":"decreased level of SRPs","type":"related"},{"name":"decreased signal recognition particle formation during vegetative growth","type":"related"},{"name":"fewer signal recognition particles present during vegetative growth","type":"exact"},{"name":"signal recognition particles present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"signal recognition particles present in decreased numbers during vegetative growth","type":"exact"},{"name":"signal recognition particles present in reduced numbers","type":"exact"}],"termid":"FYPO:0002449"}


id: GO:1900238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of regulation of metanephric mesenchymal cell migration, by platelet-derived growth factor receptor-beta signaling pathway.","definition_xrefs":["GOC:mtg_kidney_jan10","PMID:19019919","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"platelet-derived growth factor receptor-beta signaling pathway","termid":"GO:0035791"},{"relation_name":"is_a","term_name":"regulation of metanephric mesenchymal cell migration","termid":"GO:2000589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway","synonyms":[{"name":"regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signalling pathway","type":"exact"},{"name":"regulation of metanephric mesenchyme chemotaxis by platelet-derived growth factor receptor-beta signaling pathway","type":"related"}],"termid":"GO:1900238"}


id: PBO:0071308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 31","termid":"PBO:0071308"}


id: FYPO:0005992
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to P-bodies is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to P-bodies","synonyms":[{"name":"decreased protein localisation to P-bodies","type":"exact"},{"name":"decreased protein localization to P-bodies during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to P-bodies during vegetative growth","type":"exact"},{"name":"decreased protein localization to P-body","type":"exact"},{"name":"decreased protein localization to cytoplasmic P-bodies","type":"exact"},{"name":"reduced protein localization to P-bodies","type":"exact"}],"termid":"FYPO:0005992"}


id: PBO:0075343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SORL1 antisense RNA 1","termid":"PBO:0075343"}


id: PBO:0039617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A2 receptor","termid":"PBO:0039617"}


id: PBO:0091062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid/polyamine transporter","termid":"PBO:0091062"}


id: PBO:0036332
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by human COQ9 with an S. pombe MTS","termid":"PBO:0036332"}


id: PR:Q09707
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC18B11.09c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyltransferase C18B11.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18B11.09c","synonyms":[{"name":"Spom972h-SPAC18B11.09c","type":"exact"}],"termid":"PR:Q09707"}


id: GO:0042174
data:
  {"annotated_genes":["SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075297"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sporulation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporulation resulting in formation of a cellular spore","termid":"GO:0042173"},{"relation_name":"is_a","term_name":"negative regulation of sporulation","termid":"GO:0043939"},{"relation_name":"negatively_regulates","term_name":"sporulation resulting in formation of a cellular spore","termid":"GO:0030435"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sporulation resulting in formation of a cellular spore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of sporulation","type":"exact"},{"name":"down-regulation of sporulation","type":"exact"},{"name":"downregulation of sporulation","type":"exact"},{"name":"inhibition of sporulation","type":"narrow"}],"termid":"GO:0042174","terms_by_termid":{"GO:0075297":null}}


id: PBO:0017615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Saf5","termid":"PBO:0017615"}


id: GO:1902258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apoptotic process involved in outflow tract morphogenesis.","definition_xrefs":["GOC:mtg_apoptosis","GOC:dph","GOC:TermGenie","PMID:16839542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in outflow tract morphogenesis","termid":"GO:1902256"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process involved in morphogenesis","termid":"GO:1902339"},{"relation_name":"positively_regulates","term_name":"apoptotic process involved in outflow tract morphogenesis","termid":"GO:0003275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptotic process involved in outflow tract morphogenesis","synonyms":[{"name":"activation of apoptosis involved in outflow tract morphogenesis","type":"narrow"},{"name":"activation of apoptotic process involved in outflow tract morphogenesis","type":"narrow"},{"name":"positive regulation of apoptosis involved in outflow tract morphogenesis","type":"narrow"},{"name":"up regulation of apoptosis involved in outflow tract morphogenesis","type":"narrow"},{"name":"up regulation of apoptotic process involved in outflow tract morphogenesis","type":"exact"},{"name":"up-regulation of apoptosis involved in outflow tract morphogenesis","type":"narrow"},{"name":"up-regulation of apoptotic process involved in outflow tract morphogenesis","type":"exact"},{"name":"upregulation of apoptosis involved in outflow tract morphogenesis","type":"narrow"},{"name":"upregulation of apoptotic process involved in outflow tract morphogenesis","type":"exact"}],"termid":"GO:1902258"}


id: GO:1905291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CAMKK-AMPK signaling cascade.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22128786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium-mediated signaling","termid":"GO:0050850"},{"relation_name":"is_a","term_name":"regulation of CAMKK-AMPK signaling cascade","termid":"GO:1905289"},{"relation_name":"positively_regulates","term_name":"CAMKK-AMPK signaling cascade","termid":"GO:0061762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of CAMKK-AMPK signaling cascade","synonyms":[{"name":"activation of CAMKK-AMPK signaling cascade","type":"narrow"},{"name":"activation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"positive regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"up regulation of CAMKK-AMPK signaling cascade","type":"exact"},{"name":"up regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"up-regulation of CAMKK-AMPK signaling cascade","type":"exact"},{"name":"up-regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"upregulation of CAMKK-AMPK signaling cascade","type":"exact"},{"name":"upregulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"}],"termid":"GO:1905291"}


id: GO:0071394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a testosterone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to testosterone","termid":"GO:0033574"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to testosterone stimulus","termid":"GO:0071394"}


id: PBO:0113494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translational activator involved in mitochondrial translation; role in mitochondrial ribosome assembly","termid":"PBO:0113494"}


id: GO:0047414
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2Z)-2-(acetamidomethylene)-3-(hydroxymethyl)succinate + 2 H2O + H+ = 2-(hydroxymethyl)-4-oxobutanoate + acetate + CO2 + NH4.","definition_xrefs":["EC:3.5.1.66","RHEA:17677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"2-(hydroxymethyl)-3-(acetamidomethylene)succinate hydrolase activity","secondary_identifiers":["Wikipedia:2-(hydroxymethyl)-3-(acetamidomethylene)succinate_amidohydrolase_(deaminating\\,_decarboxylating)","KEGG_REACTION:R04397","MetaCyc:3.5.1.66-RXN"],"synonyms":[{"name":"2-(hydroxymethyl)-3-(acetamidomethylene)succinate amidohydrolase (deaminating, decarboxylating)","type":"related"},{"name":"alpha-hydroxymethyl-alpha'-(N-acetylaminomethylene)succinic acid hydrolase activity","type":"related"},{"name":"compound B hydrolase activity","type":"related"}],"termid":"GO:0047414"}


id: PBO:0048433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosylceramidase beta pseudogene 1","termid":"PBO:0048433"}


id: GO:0044742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the modulation of the sensory perception of pain in the bitten organism.","definition_xrefs":["GOC:fj","PMID:23034652","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of process in another organism","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of sensory perception of pain in another organism","synonyms":[{"name":"envenomation resulting in modulation of sensory perception of pain in other organism","type":"exact"},{"name":"envenomation resulting in regulation of sensory perception of pain in other organism","type":"exact"}],"termid":"GO:0044742"}


id: PBO:0027579
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_transposon-derived_cDNA_in_cell","termid":"PBO:0027579"}


id: GO:1904878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of calcium ion transmembrane transport via high voltage-gated calcium channel.","definition_xrefs":["GOC:TermGenie","PMID:23071515","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transport via high voltage-gated calcium channel","termid":"GO:1902514"},{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transport","termid":"GO:1903170"},{"relation_name":"negatively_regulates","term_name":"calcium ion transmembrane transport via high voltage-gated calcium channel","termid":"GO:0061577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of calcium ion transmembrane transport via high voltage-gated calcium channel","synonyms":[{"name":"down regulation of generation of L-type calcium current","type":"exact"},{"name":"down-regulation of generation of L-type calcium current","type":"exact"},{"name":"downregulation of generation of L-type calcium current","type":"exact"},{"name":"inhibition of generation of L-type calcium current","type":"narrow"},{"name":"negative regulation of generation of L-type calcium current","type":"related"}],"termid":"GO:1904878"}


id: PBO:0046531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum protein 44","termid":"PBO:0046531"}


id: PBO:0091658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ferric-chelate reductase Frp1","termid":"PBO:0091658"}


id: PBO:0038563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin binding transcription modulator","termid":"PBO:0038563"}


id: PATO:0000813
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000813 odor type value (obsolete PATO:0000813)","termid":"PATO:0000813"}


id: PBO:0072430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S28 pseudogene 4","termid":"PBO:0072430"}


id: GO:0006133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_electron_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete 5,10-methylenetetrahydrofolate oxidation (obsolete GO:0006133)","synonyms":[{"name":"5,10-methylenetetrahydrofolate oxidation","type":"exact"}],"termid":"GO:0006133"}


id: PBO:0063143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate and testis expressed 3","termid":"PBO:0063143"}


id: PBO:0039678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 5 subunit zeta 1","termid":"PBO:0039678"}


id: PBO:0055971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRFIP2 pseudogene 1","termid":"PBO:0055971"}


id: PBO:0080080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 42","termid":"PBO:0080080"}


id: GO:0061760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An defense response against a fungus mediated through an innate immune response. An innate immune response is mediated by germline encoded components that directly recognize components of potential pathogens.","definition_xrefs":["GOC:dph","PMID:22470487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"},{"relation_name":"is_a","term_name":"defense response to fungus","termid":"GO:0050832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antifungal innate immune response","termid":"GO:0061760"}


id: PBO:0004208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-TEFB associated cyclin, cyclin T Pch1","termid":"PBO:0004208"}


id: PR:Q7LKZ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein FAM50A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04439","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM50 family protein C1020.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.12c","secondary_identifiers":["UniProtKB:Q7LKZ5"],"synonyms":[{"name":"Spom972h-FAM50A","type":"exact"}],"termid":"PR:Q7LKZ5"}


id: GO:0009855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of an organism's body plan or part of an organism with respect to a single longitudinal plane. The pattern can either be symmetric, such that the halves are mirror images, or asymmetric where the pattern deviates from this symmetry.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of symmetry","termid":"GO:0009799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of bilateral symmetry","synonyms":[{"name":"determination of bilateral asymmetry","type":"exact"}],"termid":"GO:0009855"}


id: PBO:0030284
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_sulfide","termid":"PBO:0030284"}


id: PBO:0075770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine and arginine rich splicing factor 2","termid":"PBO:0075770"}


id: PBO:0041837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 17","termid":"PBO:0041837"}


id: GO:0006479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein alkylation","termid":"GO:0008213"},{"relation_name":"is_a","term_name":"macromolecule methylation","termid":"GO:0043414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein methylation","synonyms":[{"name":"protein amino acid methylation","type":"exact"}],"termid":"GO:0006479"}


id: PBO:0049408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase 1 soluble subunit alpha 1","termid":"PBO:0049408"}


id: GO:1902979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA replication termination involved in mitotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear DNA replication termination","termid":"GO:1902317"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0007049","GO:0006260","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"mitotic DNA replication termination","synonyms":[{"name":"DNA replication termination involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902979"}


id: PBO:0057057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 142","termid":"PBO:0057057"}


id: GO:0016832
data:
  {"annotated_genes":["SJAG_02450","SJAG_01310","SJAG_04242","SJAG_00706","SJAG_00815","SJAG_02230","SJAG_03373"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103207],"is_not":false,"summary":null,"term":"GO:0016832"},{"annotations":[107896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106359"},{"annotations":[100990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004150"},{"annotations":[110668,96116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097023"},{"annotations":[101872,101871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004332"},{"annotations":[90265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008732"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of a C-C bond in a molecule containing a hydroxyl group and a carbonyl group to form two smaller molecules, each being an aldehyde or a ketone.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00706":null,"SJAG_00815":null,"SJAG_01310":null,"SJAG_02230":null,"SJAG_02450":null,"SJAG_03373":null,"SJAG_04242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"aldehyde-lyase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:4.1.2.-","Reactome:R-HSA-200735","GO:0016228","Reactome:R-HSA-200651","Reactome:R-HSA-71249"],"synonyms":[{"name":"aldolase activity","type":"broad"}],"termid":"GO:0016832","terms_by_termid":{"GO:0004150":null,"GO:0004332":null,"GO:0008732":null,"GO:0016832":null,"GO:0097023":null,"GO:0106359":null}}


id: PBO:0084075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein involved in beta-tubulin (Tub2p) folding; isolated as mutant with increased chromosome loss and sensitivity to benomyl; regulated by the GTPase-activating protein, Cin2p, the human retinitis pigmentosa 2 (RP2) homolog","termid":"PBO:0084075"}


id: PBO:0082811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved component of the MICOS complex; MICOS (formerly MINOS or MitOS) is a mitochondrial inner membrane complex that extends into the intermembrane space and has a role in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane; forms a subcomplex with Mic12p and Mic27p whose assembly and stability requires cardiolipin; homo-oligomers cause membrane bending; ortholog of human MINOS1","termid":"PBO:0082811"}


id: PBO:0090722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic glutaminyl-tRNA ligase Qrs1","termid":"PBO:0090722"}


id: FYPO:0001568
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular glutamate level","synonyms":[{"name":"increased cellular L-glutamate level","type":"exact"},{"name":"increased cellular glutamate level during mitotic cell cycle","type":"related"},{"name":"increased cellular glutamate level during vegetative growth","type":"exact"},{"name":"increased glutamate accumulation","type":"related"}],"termid":"FYPO:0001568"}


id: PBO:0001157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin-6 (predicted)","termid":"PBO:0001157"}


id: GO:0006615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an SRP-bound ribosome forms a complex with the SRP receptor in the ER membrane, allowing the ribosome to bind to the membrane, during cotranslational membrane targeting.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein to membrane docking","termid":"GO:0022615"},{"relation_name":"part_of","term_name":"SRP-dependent cotranslational protein targeting to membrane","termid":"GO:0006614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006605","GO:0008150"],"is_obsolete":false,"name":"SRP-dependent cotranslational protein targeting to membrane, docking","synonyms":[{"name":"SRP-dependent cotranslational membrane targeting, docking","type":"exact"},{"name":"SRP-dependent cotranslational protein-membrane targeting, docking","type":"exact"},{"name":"protein docking during SRP-dependent cotranslational protein targeting to membrane","type":"exact"}],"termid":"GO:0006615"}


id: PBO:0042876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 144","termid":"PBO:0042876"}


id: PBO:0058262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4640","termid":"PBO:0058262"}


id: PBO:0039469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 17","termid":"PBO:0039469"}


id: PBO:0040991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 2 pseudogene 1","termid":"PBO:0040991"}


id: FYPO:0003683
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which any process of spliceosomal complex assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mRNA splicing, via spliceosome","termid":"FYPO:0000189"},{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"},{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex assembly","termid":"FYPO:0003628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0000294"],"is_obsolete":false,"name":"abnormal spliceosomal complex assembly","synonyms":[{"name":"abnormal spliceosomal complex assembly during mitotic cell cycle","type":"related"},{"name":"abnormal spliceosomal complex assembly during vegetative growth","type":"exact"},{"name":"abnormal spliceosome assembly","type":"broad"}],"termid":"FYPO:0003683"}


id: PBO:0030346
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete,_unequal_mitotic_sister_chromatid_segregation,_with_unseparated_DNA","termid":"PBO:0030346"}


id: GO:0061660
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of Atg12 to a substrate protein via the reaction X-Atg12 + S = X + S-Atg12, where X is either an E2 or E3 enzyme, the X-Atg12 linkage is a thioester bond, and the S-Atg12 linkage is an isopeptide bond between the C-terminal amino acid of Atg12 and the epsilon-amino group of lysine residues in the substrate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Atg12 transferase activity","termid":"GO:0019777"},{"relation_name":"is_a","term_name":"ubiquitin-like protein ligase activity","termid":"GO:0061659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0019787","GO:0003674","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"Atg12 ligase activity","synonyms":[{"name":"E3","type":"broad"}],"termid":"GO:0061660"}


id: GO:1901132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of kanamycin.","definition_xrefs":["UniPathway:UPA00965","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside antibiotic catabolic process","termid":"GO:0030649"},{"relation_name":"is_a","term_name":"polyol catabolic process","termid":"GO:0046174"},{"relation_name":"is_a","term_name":"kanamycin metabolic process","termid":"GO:1901131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"kanamycin catabolic process","synonyms":[{"name":"kanamycin breakdown","type":"exact"},{"name":"kanamycin catabolism","type":"exact"},{"name":"kanamycin degradation","type":"exact"}],"termid":"GO:1901132"}


id: PBO:0061566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal asparagine amidase","termid":"PBO:0061566"}


id: PBO:0064547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 9, pseudogene","termid":"PBO:0064547"}


id: PBO:0089660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIP/FAR complex WD repeat (scaffold) subunit, striatin, Far8/Csc3","termid":"PBO:0089660"}


id: GO:1903849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of aorta morphogenesis.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:TermGenie","GO_REF:0000058","PMID:22269326","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aorta morphogenesis","termid":"GO:1903847"},{"relation_name":"is_a","term_name":"positive regulation of artery morphogenesis","termid":"GO:1905653"},{"relation_name":"positively_regulates","term_name":"aorta morphogenesis","termid":"GO:0035909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aorta morphogenesis","synonyms":[{"name":"activation of aorta morphogenesis","type":"narrow"},{"name":"up regulation of aorta morphogenesis","type":"exact"},{"name":"up-regulation of aorta morphogenesis","type":"exact"},{"name":"upregulation of aorta morphogenesis","type":"exact"}],"termid":"GO:1903849"}


id: GO:0035243
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the addition of a second methyl group to methylated peptidyl-arginine. Methylation is on the terminal nitrogen (omega nitrogen) residue that is not already methylated, resulting in symmetrical peptidyl-N(omega),N'(omega)-dimethyled arginine residues.","definition_xrefs":["EC:2.1.1.320","PMID:14705965","RESID:AA0067","RESID:AA0069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-arginine N-methyltransferase activity","termid":"GO:0016274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0008276","GO:0140096","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"protein-arginine omega-N symmetric methyltransferase activity","secondary_identifiers":["RHEA:48108","Reactome:R-HSA-6804383"],"synonyms":[{"name":"S-adenosyl-L-methionine:[protein]-L-arginine N-methyltransferase ([protein]-Nomega,Nomega'-dimethyl-L-arginine-forming)","type":"related"},{"name":"protein arginine omega-N symmetric methylase activity","type":"exact"},{"name":"protein arginine omega-N symmetric methyltransferase activity","type":"exact"},{"name":"type II PRMT activity","type":"related"},{"name":"type II protein arginine methyltransferase activity","type":"related"}],"termid":"GO:0035243"}


id: GO:0018874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving benzoate, the anion of benzoic acid (benzenecarboxylic acid), a fungistatic compound widely used as a food preservative; it is conjugated to glycine in the liver and excreted as hippuric acid.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"benzoate metabolic process","secondary_identifiers":["UM-BBD_pathwayID:benz2","MetaCyc:P321-PWY"],"synonyms":[{"name":"benzoate metabolism","type":"exact"}],"termid":"GO:0018874"}


id: PR:P87142
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssz1 gene.","definition_xrefs":["UniProtKB:P87142","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 70 homolog C57A7.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.12","synonyms":[{"name":"Spom972h-ssz1","type":"exact"}],"termid":"PR:P87142"}


id: PBO:0058722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6850","termid":"PBO:0058722"}


id: PBO:0000264
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor suppressor syndrome, tuberous sclereosis","termid":"PBO:0000264"}


id: GO:0035179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Fine-tuning the spatial position of a larva in response to variability in their environment. For example, reorientation of a larva in the direction of a food source.","definition_xrefs":["PMID:10880478"],"gene_count":0,"genotype_count":0,"name":"obsolete larval turning behavior (obsolete GO:0035179)","synonyms":[{"name":"larval turning behaviour","type":"exact"}],"termid":"GO:0035179"}


id: PBO:0030821
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_sodium_export","termid":"PBO:0030821"}


id: PR:O75005
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vas2(valRS) gene.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"valine--tRNA ligase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.08c","secondary_identifiers":["UniProtKB:O75005"],"synonyms":[{"name":"SPBC1709.02c","type":"related"},{"name":"Spom972h-vas2(valRS)","type":"exact"},{"name":"ValRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"valyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O75005"}


id: PBO:0086744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; possibly involved in zinc homeostasis; Bdf1p-dependent transcription induced by salt stress; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus","termid":"PBO:0086744"}


id: PBO:0078523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 14","termid":"PBO:0078523"}


id: PR:O13636
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import inner membrane translocase subunit TIM50 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12210:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim50 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.01c","secondary_identifiers":["UniProtKB:O13636"],"synonyms":[{"name":"Spom972h-TIMM50","type":"exact"},{"name":"pi044","type":"related"}],"termid":"PR:O13636"}


id: MOD:01456
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue amino or imino group with a phosphono group (H2PO3 or 'phosphate').","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylated residue","termid":"MOD:00696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"N-phosphorylated residue","synonyms":[{"name":"NPhosRes","type":"exact"}],"termid":"MOD:01456"}


id: GO:0090656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A telomere maintenance process that results in the formation of a telomeric circle, or t-circle. A t-circle is an extrachromosomal duplex or single-stranded circular DNA molecule composed of t-arrays. T-circles are involved in the control of telomere length via alternative-lengthening of telomeres (ALT) pathway and telomere rapid deletion (TRD).","definition_xrefs":["GOC:BHF_telomere","PMID:19214183","GOC:nc","PMID:19581589","PMID:19809492","PMID:19858100","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of extrachromosomal circular DNA","termid":"GO:0001325"},{"relation_name":"part_of","term_name":"telomere maintenance via telomere trimming","termid":"GO:0090737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0032200"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0044085","GO:0032200"],"is_obsolete":false,"name":"t-circle formation","synonyms":[{"name":"telomeric circle formation","type":"exact"}],"termid":"GO:0090656"}


id: GO:0021869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The mitotic division of a basal progenitor giving rise to two neurons.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:cls","GOC:jid","PMID:16226447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"},{"relation_name":"part_of","term_name":"cell proliferation in forebrain","termid":"GO:0021846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain ventricular zone progenitor cell division","termid":"GO:0021869"}


id: MOD:01897
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to 5-hydroxy-3-methyl-L-proline.","definition_xrefs":["PubMed:8557573","PubMed:7592021","RESID:AA0473","PubMed:21788474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclized residue","termid":"MOD:00601"},{"relation_name":"is_a","term_name":"carbon oxygenated residue","termid":"MOD:00679"},{"relation_name":"is_a","term_name":"modified L-isoleucine residue","termid":"MOD:00910"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"5-hydroxy-3-methyl-L-proline","termid":"MOD:01905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxy-3-methyl-L-proline (Ile)","synonyms":[{"name":"(2S,3S,5Xi)-5-hydroxy-3-methylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"5-hydroxy-3-methyl-L-proline","type":"exact"},{"name":"5-hydroxy-3-methylproline","type":"exact"},{"name":"5Hy3MePro(Ile)","type":"exact"},{"name":"MOD_RES 5-hydroxy-3-methylproline (Ile)","type":"exact"},{"name":"beta-methyl-delta-hydroxyproline","type":"exact"}],"termid":"MOD:01897"}


id: GO:0019033
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure lying between the capsid and envelope of a virus, varying in thickness and often distributed asymmetrically.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral tegument","secondary_identifiers":["Wikipedia:Viral_tegument"],"termid":"GO:0019033"}


id: SO:0001106
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of five consecutive residues and two H-bonds in which: Residue(i) is Aspartate or Asparagine (Asx), side-chain O of residue(i) is H-bonded to the main-chain NH of residue(i+2) or (i+3), main-chain CO of residue(i) is H-bonded to the main-chain NH of residue(i+3) or (i+4).","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"asx_motif","secondary_identifiers":["BS:00202"],"synonyms":[{"name":"asx motif","type":"exact"}],"termid":"SO:0001106"}


id: PBO:0074555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 8","termid":"PBO:0074555"}


id: GO:1905238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cyclosporin A stimulus.","definition_xrefs":["GOC:TermGenie","PMID:24914722","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to cyclosporin A","termid":"GO:1905237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cyclosporin A","synonyms":[{"name":"cellular response to cyclophilin","type":"exact"}],"termid":"GO:1905238"}


id: PBO:0027186
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actin_cytoskeleton_during_vegetative_growth","termid":"PBO:0027186"}


id: GO:0052681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (E,R)-alpha-bisabolene + diphosphate.","definition_xrefs":["RHEA:25436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"alpha-bisabolene synthase activity","secondary_identifiers":["EC:4.2.3.38","KEGG_REACTION:R08370","MetaCyc:RXN-8550"],"synonyms":[{"name":"(2E,6E)-farnesyl-diphosphate diphosphate-lyase [(E)-alpha-bisabolene-forming] activity","type":"exact"},{"name":"bisabolene synthase activity","type":"broad"}],"termid":"GO:0052681"}


id: PBO:0074186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 7","termid":"PBO:0074186"}


id: _global:is_consecutive_sequence_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"R is_consecutive_sequence_of R iff every instance of R is equivalent to a collection of instances of U:u1, u2, un, such that no pair of ux uy is overlapping and for all ux, it is adjacent to ux-1 and ux+1, with the exception of the initial and terminal u1,and un (which may be identical).","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_consecutive_sequence_of","termid":"_global:is_consecutive_sequence_of"}


id: _global:ends_during
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"_global:temporally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ends_during","secondary_identifiers":["RO:0002093"],"termid":"_global:ends_during"}


id: PBO:0048234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 2E","termid":"PBO:0048234"}


id: PBO:0088695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-T, Gpi16","termid":"PBO:0088695"}


id: PBO:0063766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphate regulating endopeptidase X-linked","termid":"PBO:0063766"}


id: PBO:0071912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 51","termid":"PBO:0071912"}


id: PBO:0089889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoside-triphosphate reductase, anaerobic","termid":"PBO:0089889"}


id: PBO:0027049
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_ionizing_radiation_during_mitotic_G1_phase","termid":"PBO:0027049"}


id: PBO:0086436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative integral membrane protein of unknown function; interacts with Ulp1p at the nuclear periphery; member of DUP240 gene family","termid":"PBO:0086436"}


id: PBO:0051004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin (CD79A) binding protein 1 pseudogene 1","termid":"PBO:0051004"}


id: GO:0070827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chromatin organization process that preserves chromatin in a stable functional or structural state.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete chromatin maintenance (obsolete GO:0070827)","termid":"GO:0070827"}


id: GO:1990405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein antigen.","definition_xrefs":["PMID:9360996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen binding","termid":"GO:0003823"},{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"protein antigen binding","termid":"GO:1990405"}


id: SO:0000293
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repetitive element that is engineered and foreign.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"has_quality","term_name":"foreign","termid":"SO:0000784"},{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"},{"relation_name":"is_a","term_name":"engineered_foreign_region","termid":"SO:0000805"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_foreign_repetitive_element","synonyms":[{"name":"engineered foreign repetitive element","type":"exact"}],"termid":"SO:0000293"}


id: FYPO:0005420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more iron assimilation RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Iron assimilation RNAs are transcribed from genes whose products are involved in any process in which iron is solubilized and transported into a cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased level of iron assimilation gene mRNA during vegetative growth","synonyms":[{"name":"increased iron assimilation gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of iron assimilation gene RNA during vegetative growth","type":"exact"},{"name":"increased level of iron assimilation gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of iron assimilation gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0005420"}


id: FYPO:0003232
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115632,115631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[115624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone methylation during vegetative growth","termid":"FYPO:0000861"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03689","SJAG_02621","SJAG_03118"],"name":"normal histone H3-K9 methylation during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"normal histone H3 K9 methylation during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation during mitotic cell cycle","type":"related"},{"name":"normal histone H3K9me during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0003232","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0006989":null}}


id: GO:0048184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to the peptide hormone follistatin.","definition_xrefs":["GOC:jid","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete follistatin binding (obsolete GO:0048184)","synonyms":[{"name":"follistatin binding","type":"exact"}],"termid":"GO:0048184"}


id: GO:0016132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of brassinosteroids, any of a group of steroid derivatives that occur at very low concentrations in plant tissues and may have hormone-like effects.","definition_xrefs":["ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phytosteroid biosynthetic process","termid":"GO:0016129"},{"relation_name":"is_a","term_name":"brassinosteroid metabolic process","termid":"GO:0016131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"brassinosteroid biosynthetic process","secondary_identifiers":["MetaCyc:PWY-2582","MetaCyc:PWY-699"],"synonyms":[{"name":"brassinosteroid anabolism","type":"exact"},{"name":"brassinosteroid biosynthesis","type":"exact"},{"name":"brassinosteroid formation","type":"exact"},{"name":"brassinosteroid synthesis","type":"exact"}],"termid":"GO:0016132"}


id: PBO:0083131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual endo- and exopolyphosphatase with a role in phosphate metabolism; acts as both an endopolyphosphatase cleaving long chains of polyphosphate distributively to generate shorter polymer chains and as an exopolyphosphatase catalyzing the hydrolysis of terminal phosphate from polyphosphate; localizes to the vacuole, nucleus and cytosol; functions as a homodimer; relocalizes from vacuole to cytoplasm upon DNA replication stress","termid":"PBO:0083131"}


id: PBO:0044715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 2 (pseudogene)","termid":"PBO:0044715"}


id: GO:0002000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the juxtaglomerular cells of the kidneys receive information about the amount of blood flowing through the arterioles and converts the information to a molecular signal.","definition_xrefs":["ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of mechanical stimulus","termid":"GO:0050982"},{"relation_name":"part_of","term_name":"renal response to blood flow involved in circulatory renin-angiotensin regulation of systemic arterial blood pressure","termid":"GO:0001999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of renal blood flow","termid":"GO:0002000"}


id: PR:O14158
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4A8.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AB hydrolase superfamily protein C4A8.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.06c","synonyms":[{"name":"Spom972h-SPAC4A8.06c","type":"exact"}],"termid":"PR:O14158"}


id: PBO:0075255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 8","termid":"PBO:0075255"}


id: GO:0120198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the size of an imaginal disc-derived wing.","definition_xrefs":["PIMD:23485686","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of imaginal disc-derived wing size","termid":"GO:0044719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of imaginal disc-derived wing size","termid":"GO:0120198"}


id: GO:0007080
data:
  {"annotated_genes":["SJAG_03540","SJAG_01278","SJAG_02045","SJAG_05220","SJAG_00768","SJAG_02286","SJAG_01370","SJAG_02731","SJAG_04412","SJAG_00302","SJAG_00207","SJAG_03327","SJAG_04745","SJAG_05266","SJAG_00930","SJAG_01224","SJAG_03048","SJAG_00082","SJAG_02451","SJAG_01613","SJAG_01082","SJAG_04140","SJAG_00418","SJAG_03989","SJAG_04076","SJAG_02346","SJAG_04884","SJAG_00335","SJAG_00794","SJAG_05319","SJAG_04623","SJAG_03217","SJAG_03220","SJAG_02336","SJAG_01775","SJAG_02761","SJAG_04040","SJAG_01601","SJAG_04259","SJAG_01371","SJAG_00678","SJAG_02624","SJAG_00918","SJAG_01837","SJAG_01297","SJAG_03437","SJAG_03543","SJAG_01805","SJAG_01211","SJAG_00646"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87435,106410,112606,114725,93967,91367,91622,96441,109847,105958,114208,84071,86103,97388,107745,101524,83826,98499,106367,94681,87045],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051315"},{"annotations":[104308],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099607"},{"annotations":[105959,90827],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099606"},{"annotations":[95288,94684,99962,90257,104312],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990942"},{"annotations":[112995,87033,98074,108678,98073,110564,105943,109851,85426,85812,89888,90258,85205,96579,98075,103557,94685,99610,99963,104313,109296,112750,98501,95187,110162,114757,108680,108679,104936,94686],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990758"},{"annotations":[89862,86063,98445,107262,112759],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140429"},{"annotations":[112763],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140273"}]},"cv_name":"biological_process","definition":"A chromosome localization process whereby chromosomes are positioned in a specific order and orientation at the metaphase plate (spindle equator), during mitotic chromosome segregation. This alignment ensures that each daughter cell will receive the correct number of chromosomes during cell division.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metaphase chromosome alignment","termid":"GO:0051310"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic sister chromatid segregation","termid":"GO:0000070"}],"gene_count":50,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00207":null,"SJAG_00302":null,"SJAG_00335":null,"SJAG_00418":null,"SJAG_00646":null,"SJAG_00678":null,"SJAG_00768":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_00930":null,"SJAG_01082":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01278":null,"SJAG_01297":null,"SJAG_01370":null,"SJAG_01371":null,"SJAG_01601":null,"SJAG_01613":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02346":null,"SJAG_02451":null,"SJAG_02624":null,"SJAG_02731":null,"SJAG_02761":null,"SJAG_03048":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03543":null,"SJAG_03989":null,"SJAG_04040":null,"SJAG_04076":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04412":null,"SJAG_04623":null,"SJAG_04745":null,"SJAG_04884":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0051179","GO:0000070"],"is_obsolete":false,"name":"mitotic metaphase chromosome alignment","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0007080","terms_by_termid":{"GO:0051315":null,"GO:0099606":null,"GO:0099607":null,"GO:0140273":null,"GO:0140429":null,"GO:1990758":null,"GO:1990942":null}}


id: GO:1905279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retrograde transport, endosome to Golgi.","definition_xrefs":["PMID:23395371","GOC:TermGenie","GOC:bf","GOC:PARL","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"regulates","term_name":"retrograde transport, endosome to Golgi","termid":"GO:0042147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of retrograde transport, endosome to Golgi","synonyms":[{"name":"regulation of retrograde (endosome to Golgi) transport","type":"exact"}],"termid":"GO:1905279"}


id: GO:0050914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required to receive a salty taste stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of taste","termid":"GO:0050909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of salty taste","synonyms":[{"name":"salty taste perception","type":"exact"}],"termid":"GO:0050914"}


id: PBO:0000444
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.7","termid":"PBO:0000444"}


id: PBO:0052090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch repeat and BTB domain containing 7","termid":"PBO:0052090"}


id: MOD:01435
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between a cysteine residue, a glutamic acid residue and the indole compound 2-carboxy-3-methyl-4-hydroxymethyl--indole.","definition_xrefs":["PubMed:893891","RESID:AA0488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acylated residue","termid":"MOD:00672"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-glutamic acid residue","termid":"MOD:02045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"2-(cystein-S-ylcarbonyl)-3-methyl-4-(glutam-5-yloxy)methylindole","synonyms":[{"name":"2-([(1R)-1-amino-1-carboxyeth-2-yl]sulfanyl)carbonyl-3-methyl-4-([(1S)-1-amino-1-carboxy-4-oxobutan-4-yl]oxy)methyl-1H-indole","type":"exact"},{"name":"2-(cystein-S-ylcarbonyl)-3-methyl-4-(glutam-5-yloxy)methylindole","type":"exact"},{"name":"2-(cystein-S-ylcarbonyl)-4-[(glutam-5-yloxy)methyl]-3-methyl-1H-indole","type":"exact"},{"name":"BINDING 3-methyl-4-hydroxymethylindole-2-carboxylic acid (covalent; via 2 links)","type":"exact"}],"termid":"MOD:01435"}


id: GO:0045338
data:
  {"annotated_genes":["SJAG_03352","SJAG_02719","SJAG_00580","SJAG_03349","SJAG_01474","SJAG_04568","SJAG_04499","SJAG_04865","SJAG_00413","SJAG_03715","SJAG_04307"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94103,105530,92654,107368,109811,90502,84764,102571,110969,97938,95654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010142"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving farnesyl diphosphate, an intermediate in carotenoid, sesquiterpene, squalene and sterol biosynthesis, as well as a substrate in protein farnesylation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_00580":null,"SJAG_01474":null,"SJAG_02719":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_03715":null,"SJAG_04307":null,"SJAG_04499":null,"SJAG_04568":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"farnesyl diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"farnesyl diphosphate metabolism","type":"exact"}],"termid":"GO:0045338","terms_by_termid":{"GO:0010142":null}}


id: PBO:0072440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 4","termid":"PBO:0072440"}


id: FYPO:0004831
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone is decreased during anaphase. The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["GO:1990023","GO:1902967","PMID:16824200","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle midzone","termid":"FYPO:0003841"},{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle during anaphase","termid":"FYPO:0007729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle midzone during anaphase","synonyms":[{"name":"decreased protein localisation to mitotic spindle midzone during anaphase","type":"exact"},{"name":"decreased protein localization to spindle midzone during anaphase during vegetative growth","type":"exact"},{"name":"decreased protein localization to spindle midzone during mitotic anaphase","type":"exact"},{"name":"reduced protein localization to mitotic spindle midzone during anaphase","type":"exact"}],"termid":"FYPO:0004831"}


id: GO:0120034
data:
  {"annotated_genes":["SJAG_02379","SJAG_04509","SJAG_03453","SJAG_00514","SJAG_01794"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107426,83963,89530,86902,85933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of plasma membrane bounded cell projection assembly.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell projection organization","termid":"GO:0031346"},{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120032"},{"relation_name":"positively_regulates","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of plasma membrane bounded cell projection assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120034","terms_by_termid":{"GO:1902917":null}}


id: PBO:0060398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD4 binding protein 2 like 2","termid":"PBO:0060398"}


id: PBO:0083096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage response kinase; signal transduction pathway component required for DNA damage and replication checkpoints, promoting cell cycle arrest and DNA repair; role in initiation of DNA replication; inhibits gene gating through NPC protein phosphorylation, to promote fork stability; activates downstream kinase Dun1p; senses mtDNA depletion and mitochondrial ROS; relocalizes to cytosol under hypoxia; contains two FHA domains; human homolog CHEK2 implicated in breast cancer complements the null","termid":"PBO:0083096"}


id: PBO:0080142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasodilator stimulated phosphoprotein","termid":"PBO:0080142"}


id: GO:1900771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of fumitremorgin B.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete fumitremorgin B catabolic process (obsolete GO:1900771)","synonyms":[{"name":"Lanosulin breakdown","type":"related"},{"name":"Lanosulin catabolic process","type":"related"},{"name":"Lanosulin catabolism","type":"related"},{"name":"Lanosulin degradation","type":"related"},{"name":"fumitremorgin B breakdown","type":"exact"},{"name":"fumitremorgin B catabolism","type":"exact"},{"name":"fumitremorgin B degradation","type":"exact"}],"termid":"GO:1900771"}


id: PBO:0077790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis and ovary specific TOPAZ 1","termid":"PBO:0077790"}


id: PBO:0004932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anthranilate synthase component II (predicted)","termid":"PBO:0004932"}


id: PBO:0065226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 7, synaptic","termid":"PBO:0065226"}


id: PBO:0085545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; overproduction suppresses mutations affecting RNA polymerase III-dependent transcription; homologous to mammalian ribosomal protein S20 and bacterial S10","termid":"PBO:0085545"}


id: PBO:0074228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 46 member 2","termid":"PBO:0074228"}


id: PATO:0000383
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual or a population that only produces gametes that can be fertilised by male gametes.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenotypic sex","termid":"PATO:0001894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"female","termid":"PATO:0000383"}


id: PBO:0000410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy C terminal domain family protein (predicted)","termid":"PBO:0000410"}


id: PBO:0068328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF32 antisense RNA 1","termid":"PBO:0068328"}


id: PBO:0000408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NAD+ transporter (predicted)","termid":"PBO:0000408"}


id: PATO:0002406
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Easily reduced to powder or easily fragmentable or crumbly.","definition_xrefs":["PATOC:MPATH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"friability","termid":"PATO:0002405"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"friable","termid":"PATO:0002406"}


id: PBO:0056264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAM domain containing 4","termid":"PBO:0056264"}


id: GO:0090355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the chemical reactions and pathways involving auxins, plant hormones that regulate aspects of plant growth.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"positive regulation of hormone metabolic process","termid":"GO:0032352"},{"relation_name":"is_a","term_name":"regulation of auxin metabolic process","termid":"GO:0090354"},{"relation_name":"positively_regulates","term_name":"auxin metabolic process","termid":"GO:0009850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of auxin metabolic process","synonyms":[{"name":"positive regulation of auxin metabolism","type":"exact"}],"termid":"GO:0090355"}


id: PBO:0047827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box P1","termid":"PBO:0047827"}


id: PBO:0061196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NNT antisense RNA 1","termid":"PBO:0061196"}


id: PR:Q10219
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4H3.12c gene.","definition_xrefs":["UniProtKB:Q10219","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4H3.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4H3.12c","synonyms":[{"name":"Spom972h-SPAC4H3.12c","type":"exact"}],"termid":"PR:Q10219"}


id: PBO:0054434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1830","termid":"PBO:0054434"}


id: MOD:01789
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an N-terminal L-phenylalanine residue to phenylalanine immonium ion.","definition_xrefs":["PubMed:17074506","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"},{"relation_name":"is_a","term_name":"residue reporter fragment","termid":"MOD:01527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylalanine immonium ion","synonyms":[{"name":"2-phenylethaniminium","type":"exact"}],"termid":"MOD:01789"}


id: GO:0047668
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-amygdalin + H2O = (R)-prunasin + D-glucose.","definition_xrefs":["EC:3.2.1.117","RHEA:14177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"amygdalin beta-glucosidase activity","secondary_identifiers":["MetaCyc:AMYGDALIN-BETA-GLUCOSIDASE-RXN","GO:0080080","KEGG_REACTION:R02985"],"synonyms":[{"name":"(R)-amygdalin beta-glucosidase activity","type":"exact"},{"name":"amygdalin b-glucosidase activity","type":"exact"},{"name":"amygdalin beta-D-glucohydrolase activity","type":"related"},{"name":"amygdalin glucosidase activity","type":"related"},{"name":"amygdalin hydrolase activity","type":"related"},{"name":"amygdalinase","type":"broad"}],"termid":"GO:0047668"}


id: PBO:0047732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin binding protein 1 pseudogene 1","termid":"PBO:0047732"}


id: GO:0061555
data:
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id: GO:0006357
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id: PBO:0073500
data:
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id: PBO:0074159
data:
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id: GO:1905789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of detection of mechanical stimulus involved in sensory perception of touch.","definition_xrefs":["PMID:8692859","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nervous system process","termid":"GO:0031646"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"regulation of detection of mechanical stimulus involved in sensory perception of touch","termid":"GO:1905787"},{"relation_name":"positively_regulates","term_name":"detection of mechanical stimulus involved in sensory perception of touch","termid":"GO:0050976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of detection of mechanical stimulus involved in sensory perception of touch","synonyms":[{"name":"activation of detection of mechanical stimulus involved in sensory perception of touch","type":"narrow"},{"name":"activation of perception of touch, detection of mechanical stimulus","type":"narrow"},{"name":"activation of perception of touch, sensory detection of mechanical stimulus","type":"narrow"},{"name":"activation of perception of touch, sensory transduction of mechanical stimulus","type":"narrow"},{"name":"activation of sensory detection of mechanical stimulus during perception of touch","type":"narrow"},{"name":"activation of sensory transduction of mechanical stimulus during perception of touch","type":"narrow"},{"name":"activation of tactition, sensory detection of mechanical stimulus","type":"narrow"},{"name":"positive regulation of perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"positive regulation of perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"positive regulation of perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"positive regulation of sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"positive regulation of sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"positive regulation of tactition, sensory detection of mechanical stimulus","type":"exact"},{"name":"up regulation of detection of mechanical stimulus involved in sensory perception of touch","type":"exact"},{"name":"up regulation of perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"up regulation of perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"up regulation of perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"up regulation of sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"up regulation of sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"up regulation of tactition, sensory detection of mechanical stimulus","type":"exact"},{"name":"up-regulation of detection of mechanical stimulus involved in sensory perception of touch","type":"exact"},{"name":"up-regulation of perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"up-regulation of perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"up-regulation of perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"up-regulation of sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"up-regulation of sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"up-regulation of tactition, sensory detection of mechanical stimulus","type":"exact"},{"name":"upregulation of detection of mechanical stimulus involved in sensory perception of touch","type":"exact"},{"name":"upregulation of perception of touch, detection of mechanical stimulus","type":"exact"},{"name":"upregulation of perception of touch, sensory detection of mechanical stimulus","type":"exact"},{"name":"upregulation of perception of touch, sensory transduction of mechanical stimulus","type":"exact"},{"name":"upregulation of sensory detection of mechanical stimulus during perception of touch","type":"exact"},{"name":"upregulation of sensory transduction of mechanical stimulus during perception of touch","type":"exact"},{"name":"upregulation of tactition, sensory detection of mechanical stimulus","type":"exact"}],"termid":"GO:1905789"}


id: PBO:0079183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 12, pseudogene","termid":"PBO:0079183"}


id: PBO:0049635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 38","termid":"PBO:0049635"}


id: GO:0044308
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spine that originates from the axon, usually from the initial segment.","definition_xrefs":["NIF_Subcellular:sao18239917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron spine","termid":"GO:0044309"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"axonal spine","synonyms":[{"name":"axon spine","type":"exact"}],"termid":"GO:0044308"}


id: GO:0071896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, and/or maintained at the adherens junction.","definition_xrefs":["GOC:bc","PMID:26412237","GOC:aruk","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell-cell junction","termid":"GO:0150105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to adherens junction","secondary_identifiers":["GO:1904696"],"synonyms":[{"name":"protein localisation in adherens junction","type":"exact"},{"name":"protein localisation in cell-cell adherens junction","type":"exact"},{"name":"protein localisation to adherens junction","type":"exact"},{"name":"protein localisation to cell-cell adherens junction","type":"exact"},{"name":"protein localization in adherens junction","type":"exact"},{"name":"protein localization in cell-cell adherens junction","type":"exact"},{"name":"protein localization to cell-cell adherens junction","type":"exact"}],"termid":"GO:0071896"}


id: PBO:0111382
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentameric","termid":"PBO:0111382"}


id: GO:0090416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nicotinate from one side of a membrane to the other.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"nicotinate transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-8869603"],"termid":"GO:0090416"}


id: GO:0019831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete chromate sensitivity/resistance (obsolete GO:0019831)","synonyms":[{"name":"chromate sensitivity/resistance","type":"exact"}],"termid":"GO:0019831"}


id: GO:1903984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of TRAIL-activated apoptotic signaling pathway.","definition_xrefs":["PMID:24939851","GOC:bf","GOC:PARL","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:1902043"},{"relation_name":"is_a","term_name":"regulation of TRAIL-activated apoptotic signaling pathway","termid":"GO:1903121"},{"relation_name":"positively_regulates","term_name":"TRAIL-activated apoptotic signaling pathway","termid":"GO:0036462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of TRAIL-activated apoptotic signaling pathway","synonyms":[{"name":"activation of TRAIL-activated apoptotic signaling pathway","type":"narrow"},{"name":"activation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"narrow"},{"name":"activation of TRAIL-induced apoptotic signaling pathway","type":"narrow"},{"name":"activation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"narrow"},{"name":"positive regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"positive regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"positive regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"},{"name":"up regulation of TRAIL-activated apoptotic signaling pathway","type":"exact"},{"name":"up regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"up regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"up regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of TRAIL-activated apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"up-regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"},{"name":"upregulation of TRAIL-activated apoptotic signaling pathway","type":"exact"},{"name":"upregulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"upregulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"upregulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"}],"termid":"GO:1903984"}


id: PBO:0046929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 47 member C","termid":"PBO:0046929"}


id: GO:0036238
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gallate + O2 = (1E)-4-oxobut-1-ene-1,2,4-tricarboxylate.","definition_xrefs":["PMID:16030014","EC:1.13.11.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"gallate dioxygenase activity","secondary_identifiers":["MetaCyc:GALLATE-DIOXYGENASE-RXN","RHEA:28927","KEGG_REACTION:R09565"],"termid":"GO:0036238"}


id: PBO:0086004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; similar to Reg1p; expression regulated by glucose and Rgt1p; GFP-fusion protein is induced in response to the DNA-damaging agent MMS; YOR062C has a paralog, YKR075C, that arose from the whole genome duplication","termid":"PBO:0086004"}


id: PBO:0046459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermal growth factor receptor pathway substrate 15 pseudogene 1","termid":"PBO:0046459"}


id: FYPO:0005574
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which nuclear transport is abnormal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport phenotype during vegetative growth","termid":"FYPO:0001336"},{"relation_name":"is_a","term_name":"abnormal nuclear transport","termid":"FYPO:0005573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nuclear transport during meiosis","synonyms":[{"name":"abnormal nuclear transport during meiotic nuclear division","type":"related"}],"termid":"FYPO:0005574"}


id: GO:0001627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete leucine-rich G-protein receptor-like receptor activity (obsolete GO:0001627)","synonyms":[{"name":"LGR-like receptor","type":"exact"},{"name":"leucine-rich G protein receptor-like receptor activity","type":"exact"},{"name":"leucine-rich G-protein receptor-like receptor activity","type":"exact"}],"termid":"GO:0001627"}


id: GO:0005561
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleic acid (obsolete GO:0005561)","synonyms":[{"name":"nucleic acid","type":"exact"}],"termid":"GO:0005561"}


id: GO:0004290
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of the Arg-Xaa bond in Lys-Arg-Xaa and Arg-Arg-Xaa to process Yeast alpha-factor pheromone and killer toxin precursors.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete kexin activity (obsolete GO:0004290)","synonyms":[{"name":"Kex 2p proteinase","type":"narrow"},{"name":"Kex2 endopeptidase","type":"narrow"},{"name":"Kex2 endoprotease","type":"narrow"},{"name":"Kex2 endoproteinase","type":"narrow"},{"name":"Kex2 protease","type":"narrow"},{"name":"Kex2 proteinase","type":"narrow"},{"name":"Kex2-like endoproteinase","type":"narrow"},{"name":"Kex2-like precursor protein processing endoprotease","type":"narrow"},{"name":"andrenorphin-Gly-generating enzyme","type":"related"},{"name":"endoproteinase Kex2p","type":"related"},{"name":"gene KEX2 dibasic proteinase","type":"narrow"},{"name":"kexin activity","type":"exact"},{"name":"paired-basic endopeptidase activity","type":"related"},{"name":"prohormone-processing KEX2 proteinase","type":"narrow"},{"name":"prohormone-processing endoprotease activity","type":"related"},{"name":"prohormone-processing proteinase activity","type":"related"},{"name":"protease KEX2","type":"related"},{"name":"proteinase Kex2p","type":"related"},{"name":"proteinase yscF activity","type":"narrow"},{"name":"yeast KEX2 protease activity","type":"narrow"},{"name":"yeast cysteine proteinase F","type":"related"}],"termid":"GO:0004290"}


id: FYPO:0007172
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the proportion of cells in the population remains viable after entering stationary phase does not change in the presence of micafungin. Normally, wild-type cell populations survive longer in the presence of micafungin than in its absence.","definition_xrefs":["PomBase:mah","PMID:31601154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"stationary phase viability unaffected by micafungin","synonyms":[{"name":"chronological lifespan unaffected by micafungin","type":"related"},{"name":"loss of chronological lifespan extension by micafungin","type":"related"},{"name":"loss of stationary phase viability extension in presence of micafungin","type":"exact"}],"termid":"FYPO:0007172"}


id: SO:0000966
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, single-stranded, circular DNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"circular","termid":"SO:0000988"},{"relation_name":"is_a","term_name":"single_stranded_RNA_chromosome","termid":"SO:0000962"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circular_single_stranded_RNA_chromosome","synonyms":[{"name":"circular single stranded RNA chromosome","type":"exact"}],"termid":"SO:0000966"}


id: GO:0005817
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:clt"],"gene_count":0,"genotype_count":0,"name":"obsolete centrosomal mitotic factor (obsolete GO:0005817)","synonyms":[{"name":"centrosomal mitotic factor","type":"exact"}],"termid":"GO:0005817"}


id: GO:0046638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of alpha-beta T cell differentiation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell differentiation","termid":"GO:0045582"},{"relation_name":"is_a","term_name":"positive regulation of alpha-beta T cell activation","termid":"GO:0046635"},{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell differentiation","termid":"GO:0046637"},{"relation_name":"positively_regulates","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of alpha-beta T cell differentiation","synonyms":[{"name":"activation of alpha-beta T cell differentiation","type":"narrow"},{"name":"positive regulation of alpha-beta T cell development","type":"related"},{"name":"positive regulation of alpha-beta T lymphocyte differentiation","type":"exact"},{"name":"positive regulation of alpha-beta T-cell differentiation","type":"exact"},{"name":"positive regulation of alpha-beta T-lymphocyte differentiation","type":"exact"},{"name":"stimulation of alpha-beta T cell differentiation","type":"narrow"},{"name":"up regulation of alpha-beta T cell differentiation","type":"exact"},{"name":"up-regulation of alpha-beta T cell differentiation","type":"exact"},{"name":"upregulation of alpha-beta T cell differentiation","type":"exact"}],"termid":"GO:0046638"}


id: GO:0070009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a single N-terminal amino acid residue from a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).","direct_ancestors":[{"relation_name":"is_a","term_name":"aminopeptidase activity","termid":"GO:0004177"},{"relation_name":"is_a","term_name":"serine-type exopeptidase activity","termid":"GO:0070008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0008233","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"serine-type aminopeptidase activity","termid":"GO:0070009"}


id: PBO:0035740
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_ubiquitinated_protein_in_cell_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0035740"}


id: PBO:0071466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 7","termid":"PBO:0071466"}


id: GO:1904449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of aspartate secretion.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:2342602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"negative regulation of secretion by cell","termid":"GO:1903531"},{"relation_name":"is_a","term_name":"regulation of aspartate secretion","termid":"GO:1904448"},{"relation_name":"negatively_regulates","term_name":"aspartate secretion","termid":"GO:0061528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of aspartate secretion","synonyms":[{"name":"down regulation of aspartate secretion","type":"exact"},{"name":"down-regulation of aspartate secretion","type":"exact"},{"name":"downregulation of aspartate secretion","type":"exact"},{"name":"inhibition of aspartate secretion","type":"narrow"}],"termid":"GO:1904449"}


id: PBO:0086466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial aconitase isozyme; similarity to Aco1p, an aconitase required for the TCA cycle; expression induced during growth on glucose, by amino acid starvation via Gcn4p, and repressed on ethanol","termid":"PBO:0086466"}


id: GO:1905420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any vascular smooth muscle cell differentiation that is involved in phenotypic switching.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","GOC:BHF_miRNA","PMID:25089138","GOC:BHF","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular associated smooth muscle cell differentiation","termid":"GO:0035886"},{"relation_name":"is_a","term_name":"cell differentiation involved in phenotypic switching","termid":"GO:0090679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell differentiation involved in phenotypic switching","synonyms":[{"name":"VSMC differentiation involved in phenotypic dimorphism","type":"related"},{"name":"VSMC differentiation involved in phenotypic switching","type":"exact"},{"name":"vascular associated smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"vascular smooth muscle cell differentiation involved in phenotypic dimorphism","type":"related"},{"name":"vascular smooth muscle cell differentiation involved in phenotypic switching","type":"exact"}],"termid":"GO:1905420"}


id: MOD:00481
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["OMSSA:130","Unimod:106#C","URL:http://www.appliedbiosystems.com/products/productdetail.cfm?prod_id=153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Applied Biosystems cleavable ICAT(TM) heavy","synonyms":[{"name":"Applied Biosystems cleavable ICAT(TM) heavy","type":"related"},{"name":"ICAT-C:13C(9)","type":"related"},{"name":"icatheavy","type":"exact"}],"termid":"MOD:00481"}


id: PBO:0078886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 1-3","termid":"PBO:0078886"}


id: GO:0042018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-22 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-22 receptor activity","synonyms":[{"name":"IL-22 receptor activity","type":"exact"},{"name":"IL-22R","type":"exact"}],"termid":"GO:0042018"}


id: PBO:0087599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the BLOC-1 complex involved in endosomal maturation; interacts with Msb3p; null mutant is sensitive to drug inducing secretion of vacuolar cargo; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0087599"}


id: PBO:0018163
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae SSO1","termid":"PBO:0018163"}


id: PBO:0031000
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_degradation_during_vegetative_growth","termid":"PBO:0031000"}


id: PBO:0051069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 5-5","termid":"PBO:0051069"}


id: RO:0002405
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"immediately_preceded_by","termid":"RO:0002087"},{"relation_name":"is_a","term_name":"causally_downstream_of","termid":"RO:0002404"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immediately_causally_downstream_of","termid":"RO:0002405"}


id: PBO:0064144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PBX/knotted 1 homeobox 1","termid":"PBO:0064144"}


id: PBO:0057008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 100","termid":"PBO:0057008"}


id: GO:0042458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of nopaline into other compounds, including proline.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete nopaline catabolic process to proline (obsolete GO:0042458)","synonyms":[{"name":"nopaline breakdown to proline","type":"exact"},{"name":"nopaline degradation to proline","type":"exact"}],"termid":"GO:0042458"}


id: MOD:01489
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ4plex-114 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ4plex-114 reporter+balance reagent acylated residue","termid":"MOD:01485"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent N-acylated residue","termid":"MOD:01709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex-114 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex114","type":"related"}],"termid":"MOD:01489"}


id: FYPO:0004238
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 4 of histone H3 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3 acetylation during vegetative growth","termid":"FYPO:0002363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H3-K4 acetylation during vegetative growth","synonyms":[{"name":"increased histone H3-K4 acetylation during mitotic cell cycle","type":"related"},{"name":"increased histone H3K4 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004238"}


id: GO:1901598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (-)-pinoresinol.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"(-)-pinoresinol metabolic process","synonyms":[{"name":"(-)-pinoresinol metabolism","type":"exact"}],"termid":"GO:1901598"}


id: GO:0019369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving arachidonic acid, a straight chain fatty acid with 20 carbon atoms and four double bonds per molecule. Arachidonic acid is the all-Z-(5,8,11,14)-isomer.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"icosanoid metabolic process","termid":"GO:0006690"},{"relation_name":"is_a","term_name":"unsaturated fatty acid metabolic process","termid":"GO:0033559"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"arachidonate metabolic process","secondary_identifiers":["Wikipedia:Arachidonic_acid"],"synonyms":[{"name":"arachidonic acid metabolic process","type":"exact"},{"name":"arachidonic acid metabolism","type":"exact"}],"termid":"GO:0019369"}


id: GO:0007550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:isa_complete"],"gene_count":0,"genotype_count":0,"name":"obsolete establishment of dosage compensation (obsolete GO:0007550)","synonyms":[{"name":"establishment of dosage compensation","type":"exact"}],"termid":"GO:0007550"}


id: PBO:0046029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF2B5 divergent transcript","termid":"PBO:0046029"}


id: PBO:0034645
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_glycerol_level_during_cellular_response_to_non-ionic_osmotic_stress","termid":"PBO:0034645"}


id: FYPO:0002424
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch localization is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle. Cortical patches are normally present at both old and new ends of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cortical patch localization","termid":"FYPO:0001294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal actin cortical patch localization during mitotic interphase","synonyms":[{"name":"normal F-actin patch localization during mitotic interphase","type":"exact"},{"name":"normal actin cortical patch localisation during mitotic interphase","type":"exact"},{"name":"normal actin cortical patch localization at non-growing end during mitotic interphase","type":"related"},{"name":"normal actin cortical patch localization during mitotic interphase during vegetative growth","type":"exact"},{"name":"normal actin cortical patch location during mitotic interphase","type":"related"},{"name":"normal actin patch localization during mitotic interphase","type":"exact"}],"termid":"FYPO:0002424"}


id: PBO:0028755
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_punctate_nuclear_localization_during_cellular_response_to_ionizing_radiation","termid":"PBO:0028755"}


id: PBO:0075094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 143","termid":"PBO:0075094"}


id: FYPO:0007021
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional methylation of a cytosine residue in a tRNA molecule to form 2'-O-methylcytidine does not occur.","definition_xrefs":["PomBase:mah","PMID:25404562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA methylation","termid":"FYPO:0001766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000294","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"abolished tRNA cytosine 2'-O-methylation","synonyms":[{"name":"2'-O-methylcytidine absent from tRNA","type":"related"},{"name":"abolished tRNA 2'-O-methylcytidine formation","type":"exact"},{"name":"abolished tRNA Cm formation","type":"exact"},{"name":"abolished tRNA cytosine 2'-O-methylation during mitotic cell cycle","type":"related"},{"name":"abolished tRNA cytosine 2'-O-methylation during vegetative growth","type":"exact"},{"name":"tRNA cytosine 2'-O-methylation abolished","type":"related"}],"termid":"FYPO:0007021"}


id: PBO:0059129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPHOSPH6 divergent transcript","termid":"PBO:0059129"}


id: GO:0000478
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any endonucleolytic cleavage involved in the conversion of a primary ribosomal RNA (rRNA) transcript into a mature rRNA molecule. Some endonucleolytic cleavages produce the mature end, while others are a step in the process of generating the mature end from the pre-rRNA.","definition_xrefs":["GOC:krc","PMID:10690410"],"gene_count":0,"genotype_count":0,"name":"obsolete endonucleolytic cleavage involved in rRNA processing (obsolete GO:0000478)","synonyms":[{"name":"endonucleolytic cleavage during rRNA processing","type":"related"}],"termid":"GO:0000478"}


id: GO:0047156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribose 5-phosphate + acetoin = 1-deoxy-D-altro-heptulose 7-phosphate + acetaldehyde.","definition_xrefs":["RHEA:21504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transketolase or transaldolase activity","termid":"GO:0016744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016744"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016744","GO:0003674"],"is_obsolete":false,"name":"acetoin-ribose-5-phosphate transaldolase activity","secondary_identifiers":["EC:2.2.1.4","KEGG_REACTION:R02345","MetaCyc:2.2.1.4-RXN"],"synonyms":[{"name":"1-deoxy-D-altro-heptulose-7-phosphate synthase activity","type":"related"},{"name":"1-deoxy-D-altro-heptulose-7-phosphate synthetase activity","type":"related"},{"name":"3-hydroxybutan-2-one:D-ribose-5-phosphate aldehydetransferase activity","type":"related"},{"name":"3-hydroxybutan-3-one:D-ribose-5-phosphate aldehydetransferase activity","type":"related"}],"termid":"GO:0047156"}


id: GO:0140033
data:
  {"annotated_genes":["SJAG_02500","SJAG_00837","SJAG_00591","SJAG_02701","SJAG_02625","SJAG_05252"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75853,74242,78800,69824,77563,77693],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070577"}]},"cv_name":"molecular_function","definition":"Binding to a protein upon acetylation of the target protein.","definition_xrefs":["PMID:26060076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification-dependent protein binding","termid":"GO:0140030"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00591":null,"SJAG_00837":null,"SJAG_02500":null,"SJAG_02625":null,"SJAG_02701":null,"SJAG_05252":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"acetylation-dependent protein binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0140033","terms_by_termid":{"GO:0070577":null}}


id: GO:0030251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of guanylate cyclase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase inhibitor activity","termid":"GO:0010852"},{"relation_name":"is_a","term_name":"guanylate cyclase regulator activity","termid":"GO:0030249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0003674","GO:0004857","GO:0140678"],"is_obsolete":false,"name":"guanylate cyclase inhibitor activity","termid":"GO:0030251"}


id: PBO:0002221
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leigh syndrome","termid":"PBO:0002221"}


id: PBO:0086549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YEL008W is not an essential gene; predicted to be involved in metabolism","termid":"PBO:0086549"}


id: PBO:0084156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High affinity sulfate permease; sulfate uptake is mediated by specific sulfate transporters Sul1p and Sul2p, which control the concentration of endogenous activated sulfate intermediates","termid":"PBO:0084156"}


id: PBO:0039633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amine oxidase copper containing 1","termid":"PBO:0039633"}


id: PBO:0079332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 18","termid":"PBO:0079332"}


id: PBO:0081069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 2","termid":"PBO:0081069"}


id: PBO:0041147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTF3 pseudogene 2","termid":"PBO:0041147"}


id: PBO:0073424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SF1 divergent transcript","termid":"PBO:0073424"}


id: FYPO:0007559
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing diethylstilbestrol.","definition_xrefs":["PomBase:mah","PMID:33223513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000003","FYPO:0002057","FYPO:0002060","FYPO:0000139","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on diethylstilbestrol","synonyms":[{"name":"normal cell population growth in presence of diethylstilbestrol","type":"exact"},{"name":"normal cell population growth on DES","type":"exact"},{"name":"normal cell population growth on diethylstilbestrol","type":"exact"},{"name":"normal cellular response to diethylstilbestrol","type":"related"},{"name":"normal vegetative cell population growth on diethylstilbestrol","type":"exact"}],"termid":"FYPO:0007559"}


id: PBO:0110030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP144 pseudogene 2","termid":"PBO:0110030"}


id: GO:0021752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the inferior salivary nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:curators","GOC:dph","GOC:dgh","GOC:jid","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary nucleus development","termid":"GO:0021751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inferior salivary nucleus development","termid":"GO:0021752"}


id: GO:0018334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient phosphorylation of peptidyl-tyrosine to form O-phospho-L-tyrosine.","definition_xrefs":["RESID:AA0039"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via O4'-phospho-L-tyrosine (obsolete GO:0018334)","termid":"GO:0018334"}


id: GO:0060029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which an epithelium narrows along one axis and lengthens in a perpendicular axis contribution to the shaping of an organ.","definition_xrefs":["PMID:12062082","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convergent extension","termid":"GO:0060026"},{"relation_name":"part_of","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"convergent extension involved in organogenesis","termid":"GO:0060029"}


id: SO:0001632
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located 3' of a gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intergenic_variant","termid":"SO:0001628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"downstream_gene_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"ANNOVAR:downstream","type":"related"},{"name":"Jannovar:downstream_gene_variant","type":"exact"},{"name":"VEP:downstream_gene_variant","type":"exact"},{"name":"downstream gene variant","type":"exact"},{"name":"snpEff:DOWNSTREAM","type":"exact"}],"termid":"SO:0001632"}


id: GO:0000745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The net movement of nuclei towards one another, leading to the bilateral transfer of genetic material in organisms undergoing conjugation without cellular fusion.","definition_xrefs":["GOC:mah","GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration","termid":"GO:0007097"},{"relation_name":"part_of","term_name":"karyogamy involved in conjugation with mutual genetic exchange","termid":"GO:0000744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nuclear migration involved in conjugation with mutual genetic exchange","synonyms":[{"name":"nuclear exchange during conjugation without cellular fusion","type":"related"},{"name":"nuclear migration involved in conjugation without cellular fusion","type":"exact"}],"termid":"GO:0000745"}


id: PBO:0028848
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_stability_during_cellular_response_to_UV","termid":"PBO:0028848"}


id: PBO:0087583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C); APC/C is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition; component of the platform domain of the APC/C, based on structural analysis; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0087583"}


id: PR:Q09805
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 45 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00316","PANTHER:PTHR11679:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 45 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.03c","secondary_identifiers":["UniProtKB:Q09805"],"synonyms":[{"name":"Spom972h-VPS45","type":"exact"}],"termid":"PR:Q09805"}


id: GO:0052753
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: propan-2-ol + coenzyme F420 = acetone + reduced coenzyme F420.","definition_xrefs":["PMID:8706724","PMID:15016352","GOC:mengo_curators","PMID:1879431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"propan-2-ol:coenzyme F420 oxidoreductase activity","synonyms":[{"name":"F420-dependent propan-2-ol dehydrogenase activity","type":"exact"},{"name":"F420-dependent secondary alcohol dehydrogenase activity","type":"broad"},{"name":"isopropanol:coenzyme F420 oxidoreductase activity","type":"exact"}],"termid":"GO:0052753"}


id: FYPO:0004268
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of septum disassembly is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum disassembly","termid":"FYPO:0000132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased septum disassembly","synonyms":[{"name":"decreased septum disassembly during mitotic cell cycle","type":"related"},{"name":"decreased septum disassembly during vegetative growth","type":"exact"},{"name":"reduced septum disassembly","type":"exact"}],"termid":"FYPO:0004268"}


id: GO:0045806
data:
  {"annotated_genes":["SJAG_03581"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90638],"is_not":false,"summary":null,"term":"GO:0045806"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of endocytosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocytosis","termid":"GO:0030100"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"negatively_regulates","term_name":"endocytosis","termid":"GO:0006897"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"negative regulation of endocytosis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of endocytosis","type":"exact"},{"name":"down-regulation of endocytosis","type":"exact"},{"name":"downregulation of endocytosis","type":"exact"},{"name":"inhibition of endocytosis","type":"narrow"}],"termid":"GO:0045806","terms_by_termid":{"GO:0045806":null}}


id: PBO:0083003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-Amino acid N-acetyltransferase that detoxifies D-amino acids; catalyzes N-acetylation of D-amino acids through ordered bi-bi mechanism in which acetyl-CoA is first substrate bound and CoA is last product liberated; acetylates histones and polyamines, also autoacetylates","termid":"PBO:0083003"}


id: GO:0044850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of ovulation cycle where the endometrium is shed if pregnancy does not occur.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"ovulation cycle","termid":"GO:0042698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"menstrual cycle","secondary_identifiers":["Wikipedia:Menstrual_cycle"],"termid":"GO:0044850"}


id: PBO:0044144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP2 pseudogene 10","termid":"PBO:0044144"}


id: PR:000050464
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell division control protein 12 (Schizosaccharomyces pombe) that has not been phosphorylated on residues equivalent to Thr-20, Thr-22, Ser-64, Thr-95, Thr-151 and Ser-463 of the amino acid sequence represented by UniProtKB:Q10059. Example: UniProtKB:Q10059, Thr-20/Thr-22/Ser-64/Thr-95/Thr-151/Ser-463, PR:000026291.","definition_xrefs":["PMID:29343550","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division control protein 12 (Schizosaccharomyces pombe)","termid":"PR:000044734"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cdc12/UnPhos(T20,T21,S64,T95,T151,S463)","pombase_gene_id":"SPAC1F5.04c","synonyms":[{"name":"PomBase_original_PRO_term_name: cell division control protein 12 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cdc12/UnPhos:1","type":"exact"},{"name":"UniProtKB:Q10059, Thr-20/Thr-22/Ser-64/Thr-95/Thr-151/Ser-463, PR:000026291","type":"narrow"},{"name":"cdc12/UnPhos(T20,T21,S64,T95,T151,S463)","type":"exact"}],"termid":"PR:000050464"}


id: GO:1904321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a forskolin stimulus.","definition_xrefs":["GOC:TermGenie","PMID:15937517","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to forskolin","termid":"GO:1904321"}


id: GO:0140733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a tRNA ligase.","definition_xrefs":["PMID:30943413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"is_a","term_name":"ligase regulator activity","termid":"GO:0055103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0140677","GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"tRNA ligase activator activity","termid":"GO:0140733"}


id: PBO:0018207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OPT oligopeptide transmembrane transporter family protein Opt3","termid":"PBO:0018207"}


id: PBO:0058323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4696","termid":"PBO:0058323"}


id: PR:O60141
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A coiled-coil domain-containing protein 94 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03000","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein saf4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.10c","secondary_identifiers":["UniProtKB:O60141"],"synonyms":[{"name":"Spom972h-CCDC94","type":"exact"}],"termid":"PR:O60141"}


id: PBO:0070300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 6","termid":"PBO:0070300"}


id: GO:0019362
data:
  {"annotated_genes":["SJAG_00633","SJAG_02148","SJAG_03298","SJAG_02618","SJAG_01582","SJAG_03786","SJAG_03091","SJAG_02945","SJAG_05314","SJAG_04192","SJAG_03660","SJAG_03373","SJAG_00839","SJAG_03852","SJAG_02191","SJAG_03934","SJAG_01824","SJAG_01500","SJAG_02853","SJAG_02297","SJAG_00957","SJAG_02696","SJAG_01359","SJAG_00685","SJAG_00070","SJAG_00501","SJAG_04693","SJAG_03903","SJAG_00461","SJAG_01566","SJAG_03669","SJAG_03946","SJAG_00409","SJAG_06622","SJAG_04152","SJAG_02154","SJAG_02889","SJAG_02135","SJAG_04048","SJAG_01012","SJAG_02462","SJAG_01539","SJAG_02369","SJAG_06621","SJAG_02009","SJAG_02785","SJAG_04467","SJAG_04263","SJAG_04334","SJAG_02107","SJAG_02796","SJAG_00605","SJAG_03828","SJAG_01310","SJAG_04495","SJAG_04362","SJAG_00027"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99449,104980,104981,105439,105442,105443,99707,104979,90583,91072,94332,101869,104983,104984,105440,104982,101870,100522,101503,105441,112428,104978,105444,101504,105445,101505,94057],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[100524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[84674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[94250,107639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[87125,86708,95401,109157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034356"},{"annotations":[96125,113376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[101158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019677"},{"annotations":[92519,93534,87964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019674"},{"annotations":[85082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[101159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006734"},{"annotations":[92783,102547,90039,108920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006116"},{"annotations":[92520,93535,87965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"},{"annotations":[101160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006742"},{"annotations":[96924,98157,91166,98158,95839,91167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006740"},{"annotations":[72107,74925],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[113689,85371,99500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046496"},{"annotations":[105670,86709,85083],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019358"},{"annotations":[85003,92426,104481,109880],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0009052"},{"annotations":[111403,114512,92959,90588,93049,94251,107640],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0009051"},{"annotations":[85758],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905857"},{"annotations":[85276],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[74924],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic 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id: PBO:0067300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 385, pseudogene","termid":"PBO:0067300"}


id: PBO:0065717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prader Willi/Angelman region RNA 1","termid":"PBO:0065717"}


id: PBO:0076111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STX17 divergent transcript","termid":"PBO:0076111"}


id: GO:0060113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells, acquire specialized structural and/or functional features of inner ear receptor cells. Inner ear receptor cells are mechanorecptors found in the inner ear responsible for transducing signals involved in balance and sensory perception of sound.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mechanoreceptor differentiation","termid":"GO:0042490"},{"relation_name":"part_of","term_name":"inner ear development","termid":"GO:0048839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner ear receptor cell differentiation","synonyms":[{"name":"inner ear hair cell differentiation","type":"exact"}],"termid":"GO:0060113"}


id: GO:0001721
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Proteins that associate with intermediate filaments and function in the supramolecular organization of cellular intermediate filament networks.","definition_xrefs":["GOC:ajp","PMID:9484600"],"gene_count":0,"genotype_count":0,"name":"obsolete intermediate filament associated protein (obsolete GO:0001721)","synonyms":[{"name":"IFAP","type":"exact"},{"name":"intermediate filament associated protein","type":"exact"}],"termid":"GO:0001721"}


id: PBO:0074017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 11","termid":"PBO:0074017"}


id: PBO:0078205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 6-7 (non-functional)","termid":"PBO:0078205"}


id: GO:0018652
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: toluene-4-sulfonate + NADH + O2 = NAD+ + OH- + 4-sulfobenzyl alcohol.","definition_xrefs":["RHEA:51024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"toluene-sulfonate methyl-monooxygenase activity","secondary_identifiers":["MetaCyc:TSMOS-RXN","UM-BBD_reactionID:r0290"],"synonyms":[{"name":"toluene-sulphonate methyl-monooxygenase activity","type":"exact"}],"termid":"GO:0018652"}


id: GO:0015850
data:
  {"annotated_genes":["SJAG_02323","SJAG_03595","SJAG_01329","SJAG_02152","SJAG_03652","SJAG_03718","SJAG_01722","SJAG_00355","SJAG_01590","SJAG_01407","SJAG_00671","SJAG_02962","SJAG_02375","SJAG_03808","SJAG_04506","SJAG_00261"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102374],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120011"},{"annotations":[102375,97534,97723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032366"},{"annotations":[84479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990556"},{"annotations":[88618,94108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904679"},{"annotations":[86199,86198,113547,114814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903090"},{"annotations":[113548,86200,114815,86201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903091"},{"annotations":[113549,86202,86203,114816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903092"},{"annotations":[104261,105414,107390,112299,90307,98674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015918"}]},"cv_name":"biological_process","definition":"The directed movement of an organic hydroxy compound (organic alcohol) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. An organic hydroxy compound is an organic compound having at least one hydroxy group attached to a carbon atom.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00261":null,"SJAG_00355":null,"SJAG_00671":null,"SJAG_01329":null,"SJAG_01407":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_02152":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_02962":null,"SJAG_03595":null,"SJAG_03652":null,"SJAG_03718":null,"SJAG_03808":null,"SJAG_04506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"organic hydroxy compound transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"organic alcohol transport","type":"exact"}],"termid":"GO:0015850","terms_by_termid":{"GO:0015918":null,"GO:0032366":null,"GO:0120011":null,"GO:1903090":null,"GO:1903091":null,"GO:1903092":null,"GO:1904679":null,"GO:1990556":null}}


id: FYPO:0002878
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a greater extent than normal when the cell is subject to glucose starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription","termid":"FYPO:0002875"},{"relation_name":"is_a","term_name":"abnormal transcription during glucose starvation","termid":"FYPO:0006354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000294","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased transcription during glucose starvation","synonyms":[{"name":"increased transcription during cellular response to glucose starvation","type":"exact"},{"name":"increased transcription during glucose depletion","type":"exact"},{"name":"increased transcription during glucose deprivation","type":"exact"},{"name":"increased transcription during glucose limitation","type":"related"},{"name":"increased transcription in response to glucose starvation","type":"exact"}],"termid":"FYPO:0002878"}


id: MOD:01024
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to one of several monohydroxylated proline residues, including 3-hydroxy-L-proline and 4-hydroxy-L-proline.","definition_xrefs":["OMSSA:62","Unimod:35#P","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"residues isobaric at 113.047678 Da","termid":"MOD:00594"},{"relation_name":"is_a","term_name":"hydroxylated proline","termid":"MOD:00678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monohydroxylated proline","synonyms":[{"name":"Hy1Pro","type":"exact"},{"name":"Hydroxyproline","type":"exact"},{"name":"Hyp","type":"exact"},{"name":"Oxidation","type":"related"},{"name":"hydroxylationp","type":"exact"}],"termid":"MOD:01024"}


id: PBO:0004341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase e1 component beta subunit Pdb1","termid":"PBO:0004341"}


id: GO:0047630
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-ADP-2-phosphoglycerate + H2O = 3-ADP-glycerate + phosphate.","definition_xrefs":["RHEA:15861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ADP-phosphoglycerate phosphatase activity","secondary_identifiers":["EC:3.1.3.28","KEGG_REACTION:R03969","MetaCyc:ADP-PHOSPHOGLYCERATE-PHOSPHATASE-RXN"],"synonyms":[{"name":"3-(ADP)-2-phosphoglycerate phosphohydrolase activity","type":"related"},{"name":"ADPphosphoglycerate phosphatase activity","type":"related"},{"name":"adenosine diphosphate phosphoglycerate phosphatase activity","type":"related"}],"termid":"GO:0047630"}


id: GO:0006527
data:
  {"annotated_genes":["SJAG_03398","SJAG_00495"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019544"},{"annotations":[109270,93413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019547"},{"annotations":[109271,93414,102821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010121"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arginine metabolic process","termid":"GO:0006525"},{"relation_name":"is_a","term_name":"glutamine family amino acid catabolic process","termid":"GO:0009065"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00495":null,"SJAG_03398":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"arginine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"arginine breakdown","type":"exact"},{"name":"arginine catabolism","type":"exact"},{"name":"arginine degradation","type":"exact"}],"termid":"GO:0006527","terms_by_termid":{"GO:0010121":null,"GO:0019544":null,"GO:0019547":null}}


id: PBO:0081186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc fingers and homeoboxes 2","termid":"PBO:0081186"}


id: SO:1000175
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome structure variant that has not been characterized fully.","direct_ancestors":[{"relation_name":"is_a","term_name":"uncharacterized_chromosomal_mutation","termid":"SO:1000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partially_characterized_chromosomal_mutation","synonyms":[{"name":"partially characterized chromosomal mutation","type":"exact"}],"termid":"SO:1000175"}


id: GO:0044327
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Distal part of the dendritic spine, that carries the post-synaptic density.","definition_xrefs":["GOC:BHF","GOC:nln","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"dendritic spine","termid":"GO:0043197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic spine head","secondary_identifiers":["NIF_Subcellular:sao952643730"],"synonyms":[{"name":"spine head","type":"broad"}],"termid":"GO:0044327"}


id: GO:0046790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a virion, either by binding to components of the capsid or the viral envelope.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"virion binding","termid":"GO:0046790"}


id: GO:0071886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the amine 1-(4-iodo-2,5-dimethoxyphenyl)propan-2-amine, a serotonin receptor agonist that can act as a psychedelic drug.","definition_xrefs":["GOC:yaf","PMID:19057895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine binding","termid":"GO:0043176"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"1-(4-iodo-2,5-dimethoxyphenyl)propan-2-amine binding","synonyms":[{"name":"(+/-)2-(4-iodo-2,5-dimethoxy-phenyl)-1-methyl-ethylamine binding","type":"exact"},{"name":"1-(4-iodo-2,5-dimethoxyphenyl)-2-aminopropane binding","type":"exact"},{"name":"4-iodo-2,5-dimethoxyphenylisopropylamine binding","type":"exact"}],"termid":"GO:0071886"}


id: GO:1905723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of trypanothione biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18949025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of trypanothione biosynthetic process","termid":"GO:1905722"},{"relation_name":"negatively_regulates","term_name":"trypanothione biosynthetic process","termid":"GO:0019342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"negative regulation of trypanothione biosynthetic process","synonyms":[{"name":"down regulation of trypanothione anabolism","type":"exact"},{"name":"down regulation of trypanothione biosynthesis","type":"exact"},{"name":"down regulation of trypanothione biosynthetic process","type":"exact"},{"name":"down regulation of trypanothione formation","type":"exact"},{"name":"down regulation of trypanothione synthesis","type":"exact"},{"name":"down-regulation of trypanothione anabolism","type":"exact"},{"name":"down-regulation of trypanothione biosynthesis","type":"exact"},{"name":"down-regulation of trypanothione biosynthetic process","type":"exact"},{"name":"down-regulation of trypanothione formation","type":"exact"},{"name":"down-regulation of trypanothione synthesis","type":"exact"},{"name":"downregulation of trypanothione anabolism","type":"exact"},{"name":"downregulation of trypanothione biosynthesis","type":"exact"},{"name":"downregulation of trypanothione biosynthetic process","type":"exact"},{"name":"downregulation of trypanothione formation","type":"exact"},{"name":"downregulation of trypanothione synthesis","type":"exact"},{"name":"inhibition of trypanothione anabolism","type":"narrow"},{"name":"inhibition of trypanothione biosynthesis","type":"narrow"},{"name":"inhibition of trypanothione biosynthetic process","type":"narrow"},{"name":"inhibition of trypanothione formation","type":"narrow"},{"name":"inhibition of trypanothione synthesis","type":"narrow"},{"name":"negative regulation of trypanothione anabolism","type":"exact"},{"name":"negative regulation of trypanothione biosynthesis","type":"exact"},{"name":"negative regulation of trypanothione formation","type":"exact"},{"name":"negative regulation of trypanothione synthesis","type":"exact"}],"termid":"GO:1905723"}


id: FYPO:0005589
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylserine measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular phosphorus level","termid":"FYPO:0001543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular phosphatidylserine level","synonyms":[{"name":"normal cellular PS level","type":"exact"},{"name":"normal cellular phosphatidylserine accumulation","type":"related"},{"name":"normal cellular phosphatidylserine level during mitotic cell cycle","type":"related"},{"name":"normal cellular phosphatidylserine level during vegetative growth","type":"exact"}],"termid":"FYPO:0005589"}


id: PBO:0004298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FANCM-MHF complex subunit Mhf1","termid":"PBO:0004298"}


id: FYPO:0006011
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mating projection assembly occurs along the lateral portion of the long axis of the cell instead of at one cell end.","definition_xrefs":["PomBase:mah","PMID:28410370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal shmoo formation","termid":"FYPO:0000568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000301","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"shmoo formation at cell side","synonyms":[{"name":"lateral shmoo formation","type":"exact"},{"name":"mating projection assembly at cell side","type":"exact"},{"name":"shmoo formation on cell side","type":"exact"}],"termid":"FYPO:0006011"}


id: PBO:0065743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-phosphoxylose phosphatase 1","termid":"PBO:0065743"}


id: PBO:0041090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BR serine/threonine kinase 1","termid":"PBO:0041090"}


id: FYECO:0000109
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition that describes the presence of one or more substances at higher than default levels in growth medium, assay buffer, etc.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical added or excluded","termid":"FYECO:0000059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping excess","termid":"FYECO:0000109"}


id: PBO:0005168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cargo receptor for soluble proteins (predicted)","termid":"PBO:0005168"}


id: GO:0015641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoprotein toxin (obsolete GO:0015641)","synonyms":[{"name":"lipoprotein toxin","type":"exact"}],"termid":"GO:0015641"}


id: PBO:0085330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol transfer protein; has a potential role in regulating lipid and fatty acid metabolism under heme-depleted conditions; interacts specifically with thioredoxin peroxidase; may have a role in oxidative stress resistance; protein abundance increases in response to DNA replication stress","termid":"PBO:0085330"}


id: FYPO:0009064
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of X-rays and ramapycin.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"},{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to X-rays and rapamycin during vegetative growth.","synonyms":[{"name":"decreased vegetative cell population growth when treated with rapamycin and X-rays","type":"exact"}],"termid":"FYPO:0009064"}


id: GO:1902030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H3-K18 acetylation.","definition_xrefs":["PMID:22110608","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K18 acetylation (obsolete GO:1902030)","synonyms":[{"name":"down regulation of histone H3 acetylation at K18","type":"exact"},{"name":"down regulation of histone H3-K18 acetylation","type":"exact"},{"name":"down regulation of histone H3K18 acetylation","type":"exact"},{"name":"down-regulation of histone H3 acetylation at K18","type":"exact"},{"name":"down-regulation of histone H3-K18 acetylation","type":"exact"},{"name":"down-regulation of histone H3K18 acetylation","type":"exact"},{"name":"downregulation of histone H3 acetylation at K18","type":"exact"},{"name":"downregulation of histone H3-K18 acetylation","type":"exact"},{"name":"downregulation of histone H3K18 acetylation","type":"exact"},{"name":"inhibition of histone H3 acetylation at K18","type":"exact"},{"name":"inhibition of histone H3-K18 acetylation","type":"narrow"},{"name":"inhibition of histone H3K18 acetylation","type":"exact"},{"name":"negative regulation of histone H3 acetylation at K18","type":"exact"},{"name":"negative regulation of histone H3K18 acetylation","type":"exact"}],"termid":"GO:1902030"}


id: GO:0060450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of muscle contraction of the hindgut, the posterior part of the alimentary canal, including the rectum, and the large intestine.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hindgut contraction","termid":"GO:0043134"},{"relation_name":"is_a","term_name":"positive regulation of smooth muscle contraction","termid":"GO:0045987"},{"relation_name":"is_a","term_name":"positive regulation of digestive system process","termid":"GO:0060456"},{"relation_name":"positively_regulates","term_name":"hindgut contraction","termid":"GO:0043133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hindgut contraction","termid":"GO:0060450"}


id: PBO:0040760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beclin 1","termid":"PBO:0040760"}


id: GO:1990793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of substance P by a cell, in which the substance P acts as a neurotransmitter.","definition_xrefs":["PMID:15292051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"is_a","term_name":"substance P secretion","termid":"GO:1990772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"substance P secretion, neurotransmission","termid":"GO:1990793"}


id: PBO:0062811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 9 pseudogene 2","termid":"PBO:0062811"}


id: GO:0103083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-(4'-methylthio)butylmalate = 3-(4'-methylthio)butylmalate.","definition_xrefs":["EC:5.4.4.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular hydroxytransferase activity","termid":"GO:0050486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"methylthiobutylmalate isomerase activity","secondary_identifiers":["MetaCyc:RXNQT-4167"],"termid":"GO:0103083"}


id: PBO:0074300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLX1 homolog A, structure-specific endonuclease subunit","termid":"PBO:0074300"}


id: PBO:0044283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine receptor 6","termid":"PBO:0044283"}


id: PBO:0001620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose-phosphate pyrophosphokinase (predicted)","termid":"PBO:0001620"}


id: PR:Q09858
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nnf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein nnf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.04","synonyms":[{"name":"NMS complex subunit nnf1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-nnf1","type":"exact"}],"termid":"PR:Q09858"}


id: PBO:0003176
data:
  {"annotation_feature_type":"gene","cv_name":"ex_tools","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selectable marker, amino acid auxotroph","termid":"PBO:0003176"}


id: FYPO:0003137
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the mitotic spindle pole bodies are normal (i.e. indistinguishable from wild type) with respect to structure, composition, location, and orientation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"is_a","term_name":"normal spindle pole body","termid":"FYPO:0005379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic spindle pole body","synonyms":[{"name":"normal mitotic SPB","type":"exact"},{"name":"normal mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"normal spindle pole body during mitosis","type":"exact"},{"name":"normal spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0003137"}


id: GO:0018646
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (1S,4R)-1-hydroxy-2-oxolimonene + NADPH + O2 = NADP+ + OH- + (3R)-3-isopropenyl-6-oxoheptanoate.","definition_xrefs":["UM-BBD_reactionID:r0736"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-hydroxy-2-oxolimonene 1,2-monooxygenase activity (obsolete GO:0018646)","termid":"GO:0018646"}


id: PBO:0059027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 16","termid":"PBO:0059027"}


id: PATO:0002035
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being on the same side in relation to another structure.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ipsilateral to","synonyms":[{"name":"ipsilateral","type":"exact"}],"termid":"PATO:0002035"}


id: PBO:0056819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 12","termid":"PBO:0056819"}


id: PBO:0054200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1580","termid":"PBO:0054200"}


id: PBO:0061881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oocyte secreted protein family member 4A","termid":"PBO:0061881"}


id: PBO:0087109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal protein P2 beta; a component of the ribosomal stalk, which is involved in the interaction between translational elongation factors and the ribosome; free (non-ribosomal) P2 stimulates the phosphorylation of the eIF2 alpha subunit (Sui2p) by Gcn2p; regulates the accumulation of P1 (Rpp1Ap and Rpp1Bp) in the cytoplasm","termid":"PBO:0087109"}


id: PR:P0CS86
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1348.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CS86"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0494 membrane protein C1348.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1348.01","synonyms":[{"name":"Spom972h-SPBC1348.01","type":"exact"}],"termid":"PR:P0CS86"}


id: GO:0052574
data:
  {"annotated_genes":["SJAG_02954","SJAG_03818","SJAG_02951","SJAG_02950","SJAG_01784"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105645,109778,109785,109786,109796],"is_not":false,"summary":null,"term":"GO:0052574"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UDP-D-galactose, a substance composed of D-galactose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"UDP-D-galactose metabolic process","termid":"GO:0052573"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01784":null,"SJAG_02950":null,"SJAG_02951":null,"SJAG_02954":null,"SJAG_03818":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"UDP-galactose biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-7344"],"synonyms":[{"name":"UDP-D-galactopyranose biosynthesis","type":"exact"},{"name":"UDP-D-galactopyranose biosynthetic process","type":"exact"},{"name":"UDP-D-galactose biosynthesis","type":"exact"},{"name":"UDP-D-galactose biosynthetic process","type":"exact"},{"name":"UDP-alpha-D-galactose biosynthesis","type":"exact"},{"name":"UDP-galactose biosynthesis","type":"exact"},{"name":"uridine diphosphate galactose biosynthesis","type":"exact"},{"name":"uridine diphosphate galactose biosynthetic process","type":"exact"}],"termid":"GO:0052574","terms_by_termid":{"GO:0052574":null}}


id: PATO:0001303
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's disposition to varying or changing.","definition_xrefs":["Dictionary:http://dictionary.reference.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variability","synonyms":[{"name":"variability of a physical quality","type":"related"}],"termid":"PATO:0001303"}


id: GO:1901397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transforming growth factor beta2 activation.","definition_xrefs":["GOC:TermGenie","GOC:sl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transforming growth factor beta2 activation (obsolete GO:1901397)","synonyms":[{"name":"activation of TGF-beta 2 activation","type":"exact"},{"name":"activation of TGFB2 activation","type":"exact"},{"name":"activation of TGFbeta 2 activation","type":"exact"},{"name":"activation of transforming growth factor beta2 activation","type":"narrow"},{"name":"positive regulation of TGF-beta 2 activation","type":"exact"},{"name":"positive regulation of TGFB2 activation","type":"exact"},{"name":"positive regulation of TGFbeta 2 activation","type":"exact"},{"name":"up regulation of TGF-beta 2 activation","type":"exact"},{"name":"up regulation of TGFB2 activation","type":"exact"},{"name":"up regulation of TGFbeta 2 activation","type":"exact"},{"name":"up regulation of transforming growth factor beta2 activation","type":"exact"},{"name":"up-regulation of TGF-beta 2 activation","type":"exact"},{"name":"up-regulation of TGFB2 activation","type":"exact"},{"name":"up-regulation of TGFbeta 2 activation","type":"exact"},{"name":"up-regulation of transforming growth factor beta2 activation","type":"exact"},{"name":"upregulation of TGF-beta 2 activation","type":"exact"},{"name":"upregulation of TGFB2 activation","type":"exact"},{"name":"upregulation of TGFbeta 2 activation","type":"exact"},{"name":"upregulation of transforming growth factor beta2 activation","type":"exact"}],"termid":"GO:1901397"}


id: PBO:0082796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the U5 snRNP complex; required for splicing of U3 precursors; originally described as a splicing factor specifically required for splicing pre-mRNA of the MATa1 cistron","termid":"PBO:0082796"}


id: PBO:0004239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lid2 complex subunit, predicted histone demethylase Lid2","termid":"PBO:0004239"}


id: PBO:0054206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1586","termid":"PBO:0054206"}


id: SO:0001272
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A noncoding RNA that binds to a specific amino acid to allow that amino acid to be used by the ribosome during translation of RNA.","direct_ancestors":[{"relation_name":"has_quality","term_name":"tRNA_encoding","termid":"SO:0000663"},{"relation_name":"is_a","term_name":"sncRNA_gene","termid":"SO:0002342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA_gene","synonyms":[{"name":"tRNA gene","type":"exact"}],"termid":"SO:0001272"}


id: PBO:0073913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 4","termid":"PBO:0073913"}


id: FYPO:0001240
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide, also known as diamide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000257","FYPO:0000139","FYPO:0000003","FYPO:0002058","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on diamide","synonyms":[{"name":"normal cell population growth in presence of diamide","type":"exact"},{"name":"normal cell population growth on N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide","type":"exact"},{"name":"normal cell population growth on diamide","type":"exact"},{"name":"normal cellular response to diamide","type":"related"},{"name":"normal vegetative cell population growth on diamide","type":"exact"}],"termid":"FYPO:0001240"}


id: GO:0047258
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sphingosine + UDP-D-galactose = H+ + psychosine + UDP.","definition_xrefs":["EC:2.4.1.23","RHEA:19485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"sphingosine beta-galactosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.23-RXN","KEGG_REACTION:R01928"],"synonyms":[{"name":"UDP-galactose:sphingosine 1-beta-galactotransferase activity","type":"related"},{"name":"UDPgalactose:sphingosine 1-beta-galactotransferase activity","type":"related"},{"name":"UDPgalactose:sphingosine O-galactosyl transferase activity","type":"related"},{"name":"galactosyl-sphingosine transferase activity","type":"related"},{"name":"psychosine-UDP galactosyltransferase activity","type":"related"},{"name":"psychosine-uridine diphosphate galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-sphingosine beta-galactosyltransferase activity","type":"related"}],"termid":"GO:0047258"}


id: PBO:0090903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, S. pombe SPBC16G5.19 predicted on opposite strand, one is likely incorrect, similarity detected with tblastn (S. j 4008650-4008727) in the SPBC16G5.19 reading frame, unable to get a CDS.","termid":"PBO:0090903"}


id: PR:Q9UUF1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A deoxyribonuclease TATDN1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02854","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease Tat-D (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.08","secondary_identifiers":["UniProtKB:Q9UUF1"],"synonyms":[{"name":"Spom972h-TATDN1","type":"exact"}],"termid":"PR:Q9UUF1"}


id: PBO:0090539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA translocase Rhp16b","termid":"PBO:0090539"}


id: PBO:0083191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the uncharacterized ORF YML133C","termid":"PBO:0083191"}


id: GO:0004425
data:
  {"annotated_genes":["SJAG_01455"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99568],"is_not":false,"summary":null,"term":"GO:0004425"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate = 1-(indol-3-yl)glycerol 3-phosphate + CO2 + H2O.","definition_xrefs":["EC:4.1.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"indole-3-glycerol-phosphate synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:IGPSYN-RXN","RHEA:23476"],"synonyms":[{"name":"1-(2-carboxyphenylamino)-1-deoxy-D-ribulose-5-phosphate carboxy-lyase (cyclizing)","type":"related"},{"name":"1-(2-carboxyphenylamino)-1-deoxy-D-ribulose-5-phosphate carboxy-lyase [cyclizing; 1-C-(3-indolyl)-glycerol-3-phosphate-forming]","type":"related"},{"name":"indole-3-glycerophosphate synthase activity","type":"related"},{"name":"indoleglycerol phosphate synthase activity","type":"related"},{"name":"indoleglycerol phosphate synthetase activity","type":"related"}],"termid":"GO:0004425","terms_by_termid":{"GO:0004425":null}}


id: PBO:0088600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-transcriptional RNA stability regulator Mkt1","termid":"PBO:0088600"}


id: PBO:0090390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-methyl-5-thioadenosine phosphorylase Mta1","termid":"PBO:0090390"}


id: GO:0031593
data:
  {"annotated_genes":["SJAG_03345","SJAG_04384","SJAG_02992","SJAG_00941","SJAG_00052"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70007,74445,74705,76833],"is_not":false,"summary":null,"term":"GO:0031593"},{"annotations":[76140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036435"}]},"cv_name":"molecular_function","definition":"Binding to a protein upon poly-ubiquitination of the target protein.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification-dependent protein binding","termid":"GO:0140030"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00941":null,"SJAG_02992":null,"SJAG_03345":null,"SJAG_04384":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"polyubiquitin modification-dependent protein binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0031593","terms_by_termid":{"GO:0031593":null,"GO:0036435":null}}


id: MOD:01604
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to 4x(15)N labeled L-arginine.","definition_xrefs":["PubMed:18688235","URL:http://www.sigmaaldrich.com/catalog/ProductDetail.do?N4=600113|ALDRICH&N5=SEARCH_CONCAT_PNO|BRAND_KEY&F=SPEC&lang=en_US0.000000E+000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(15)N labeled residue","termid":"MOD:00843"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4x(15)N labeled L-arginine","termid":"MOD:01604"}


id: PR:O13843
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dal1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ureidoglycolate lyase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.04","synonyms":[{"name":"Spom972h-dal1","type":"exact"},{"name":"Ureidoglycolatase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13843"}


id: GO:0043011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a monocyte acquires the specialized features of a dendritic cell, an immunocompetent cell of the lymphoid and hemopoietic systems and skin.","definition_xrefs":["CL:0000782","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid dendritic cell activation","termid":"GO:0001773"},{"relation_name":"is_a","term_name":"myeloid leukocyte differentiation","termid":"GO:0002573"},{"relation_name":"is_a","term_name":"dendritic cell differentiation","termid":"GO:0097028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid dendritic cell differentiation","secondary_identifiers":["Wikipedia:Dendritic_cell"],"termid":"GO:0043011"}


id: PBO:0043782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase B1","termid":"PBO:0043782"}


id: GO:0009544
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The protein complex that catalyzes the phosphorylation of ADP to ATP in chloroplasts.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete chloroplast ATP synthase complex (obsolete GO:0009544)","termid":"GO:0009544"}


id: PBO:0046993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 88 member D","termid":"PBO:0046993"}


id: PBO:0014296
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by N. tabacum Ran-AI","termid":"PBO:0014296"}


id: PBO:0046871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM3 metabolism regulating signaling molecule B","termid":"PBO:0046871"}


id: GO:0004005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane cation-transporting ATPase (obsolete GO:0004005)","synonyms":[{"name":"plasma membrane cation-transporting ATPase","type":"exact"}],"termid":"GO:0004005"}


id: PBO:0003344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tea1 anchoring protein Mod5","termid":"PBO:0003344"}


id: PBO:0027528
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_binucleate_aseptate_cell_with_mitotic_cell_cycle_arrest_in_G2_before_cell_separation","termid":"PBO:0027528"}


id: PBO:0069596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 873, pseudogene","termid":"PBO:0069596"}


id: GO:0140651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation and dephosphorylation of creatine in a futile cycle, which dissipates the high energy charge of phosphocreatine as heat without performing any mechanical or chemical work. The futile creatine cycle takes place in thermogenic fat cells and is part of adaptive thermogenesis.","definition_xrefs":["PMID:33597756","PMID:33981039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"},{"relation_name":"part_of","term_name":"adaptive thermogenesis","termid":"GO:1990845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"futile creatine cycle","termid":"GO:0140651"}


id: PATO:0002530
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"obsolete episodic (obsolete PATO:0002530)","termid":"PATO:0002530"}


id: GO:0035346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of hypoxanthine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound transport","termid":"GO:0032241"},{"relation_name":"is_a","term_name":"regulation of hypoxanthine transport","termid":"GO:0035345"},{"relation_name":"positively_regulates","term_name":"hypoxanthine transport","termid":"GO:0035344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of hypoxanthine transport","synonyms":[{"name":"positive regulation of 6-hydroxypurine transport","type":"exact"}],"termid":"GO:0035346"}


id: GO:0004839
data:
  {"annotated_genes":["SJAG_00853"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99828],"is_not":false,"summary":null,"term":"GO:0004839"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: E1 + ubiquitin + ATP--> E1-ubiquitin + AMP + PPi, where the E1-ubiquitin linkage is a thioester bond between the C-terminal glycine of Ub and a sulfhydryl side group of an E1 cysteine residue. This is the first step in a cascade of reactions in which ubiquitin is ultimately added to a protein substrate.","definition_xrefs":["Wikipedia:Ubiquitin-activating_enzyme","GOC:BioGRID"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like modifier activating enzyme activity","termid":"GO:0008641"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"ubiquitin activating enzyme activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8852132","Reactome:R-HSA-8852133","Reactome:R-HSA-8865050","Reactome:R-HSA-8865090","Reactome:R-HSA-8865098","EC:6.2.1.45","Reactome:R-HSA-8852134"],"synonyms":[{"name":"E1 ubiquitin-activating enzyme","type":"related"}],"termid":"GO:0004839","terms_by_termid":{"GO:0004839":null}}


id: PBO:0040013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 2","termid":"PBO:0040013"}


id: GO:0099009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The circularization of a viral genome following infection of a host cell. This is common amongst bacterial viruses to protect the viral genome ends from nucleases, to convert the linear genome to an integrative precursor or to give rise to the replicative form of the genome. It can be mediated by covalent closure of the DNA sticky ends, recombinaison between redundant terminal sequences or via the binding of a protein at the viral DNA extremities.","definition_xrefs":["PMID:11894948","PMID:15489417","PMID:19523475","PMID:319596","VZ:3968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral genome circularization","termid":"GO:0099009"}


id: GO:0101021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: estrogen + donor-H2 + O2 = 2-hydroxyestrogen + H2O.","definition_xrefs":["GOC:rl","GOC:BHF","PMID:14559847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hydroxylase activity","termid":"GO:0008395"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"estrogen 2-hydroxylase activity","synonyms":[{"name":"oestrogen 2-hydroxylase activity","type":"exact"}],"termid":"GO:0101021"}


id: PBO:0000625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WLM domain protein","termid":"PBO:0000625"}


id: PBO:0086037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function found in the ER and vacuole lumen; overexpression of YIL089W affects endocytic protein trafficking","termid":"PBO:0086037"}


id: GO:0047865
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N,N-dimethylglycine + electron-transfer flavoprotein + H2O = sarcosine + formaldehyde + reduced electron-transfer flavoprotein.","definition_xrefs":["EC:1.5.8.4","RHEA:52856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, flavin as acceptor","termid":"GO:0046997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dimethylglycine dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R01565","Reactome:R-HSA-6797653","MetaCyc:DIMETHYLGLYCINE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"N,N-dimethylglycine oxidase activity","type":"related"},{"name":"N,N-dimethylglycine:(acceptor) oxidoreductase (demethylating)","type":"related"},{"name":"N,N-dimethylglycine:acceptor oxidoreductase (demethylating)","type":"related"}],"termid":"GO:0047865"}


id: GO:0032086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a type III restriction endodeoxyribonuclease activity.","definition_xrefs":["GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of restriction endodeoxyribonuclease activity","termid":"GO:0032072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of type III site-specific deoxyribonuclease activity","synonyms":[{"name":"regulation of type III restriction endoribonuclease activity","type":"exact"},{"name":"type III restriction endodeoxyribonuclease regulator","type":"related"},{"name":"type III restriction enzyme regulator","type":"related"}],"termid":"GO:0032086"}


id: GO:0102133
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (4R)-limonene + O2 + NADH + H+ = (4R)-perillyl alcohol + NAD + H2O.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"limonene hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-11493"],"termid":"GO:0102133"}


id: PBO:0067804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 106","termid":"PBO:0067804"}


id: GO:0070062
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.","definition_xrefs":["PMID:15908444","GOC:vesicles","PMID:17641064","PMID:19498381","PMID:19442504","GOC:BHF","GOC:mah","PMID:22418571","PMID:24009894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular vesicle","termid":"GO:1903561"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"extracellular exosome","synonyms":[{"name":"exosome","type":"exact"},{"name":"extracellular vesicular exosome","type":"exact"}],"termid":"GO:0070062"}


id: PBO:0045108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrophin","termid":"PBO:0045108"}


id: GO:1901303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cargo loading into a COPII-coated vesicle.","definition_xrefs":["PMID:15899885","GOC:lb","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of cargo loading into COPII-coated vesicle","termid":"GO:1901301"},{"relation_name":"negatively_regulates","term_name":"COPII-coated vesicle cargo loading","termid":"GO:0090110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of cargo loading into COPII-coated vesicle","synonyms":[{"name":"down regulation of COPII coat-cargo complex assembly","type":"related"},{"name":"down regulation of cargo loading into COPII vesicle","type":"exact"},{"name":"down regulation of cargo loading into COPII-coated vesicle","type":"exact"},{"name":"down regulation of cargo selection into COPII-coated vesicle","type":"exact"},{"name":"down-regulation of COPII coat-cargo complex assembly","type":"related"},{"name":"down-regulation of cargo loading into COPII vesicle","type":"exact"},{"name":"down-regulation of cargo loading into COPII-coated vesicle","type":"exact"},{"name":"down-regulation of cargo selection into COPII-coated vesicle","type":"exact"},{"name":"downregulation of COPII coat-cargo complex assembly","type":"related"},{"name":"downregulation of cargo loading into COPII vesicle","type":"exact"},{"name":"downregulation of cargo loading into COPII-coated vesicle","type":"exact"},{"name":"downregulation of cargo selection into COPII-coated vesicle","type":"exact"},{"name":"inhibition of COPII coat-cargo complex assembly","type":"related"},{"name":"inhibition of COPII vesicle protein binding","type":"narrow"},{"name":"inhibition of cargo loading into COPII vesicle","type":"exact"},{"name":"inhibition of cargo loading into COPII-coated vesicle","type":"narrow"},{"name":"inhibition of cargo selection into COPII-coated vesicle","type":"exact"},{"name":"inhibition of protein sorting into COPII-coated vesicles","type":"exact"},{"name":"negative regulation of COPII coat-cargo complex assembly","type":"related"},{"name":"negative regulation of cargo loading into COPII vesicle","type":"exact"},{"name":"negative regulation of cargo selection into COPII-coated vesicle","type":"exact"}],"termid":"GO:1901303"}


id: PBO:0054279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1670","termid":"PBO:0054279"}


id: GO:0023060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is released and/or conveyed from one location to another.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission (obsolete GO:0023060)","synonyms":[{"name":"signal transmission","type":"exact"}],"termid":"GO:0023060"}


id: PBO:0088083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain-containing protein that interacts with Cdc48p; ubiquitin regulatory X is also known as UBX","termid":"PBO:0088083"}


id: GO:0008219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process that results in permanent cessation of all vital functions of a cell. A cell should be considered dead when any one of the following molecular or morphological criteria is met: (1) the cell has lost the integrity of its plasma membrane; (2) the cell, including its nucleus, has undergone complete fragmentation into discrete bodies (frequently referred to as apoptotic bodies). The cell corpse (or its fragments) may be engulfed by an adjacent cell in vivo, but engulfment of whole cells should not be considered a strict criteria to define cell death as, under some circumstances, live engulfed cells can be released from phagosomes (see PMID:18045538).","definition_xrefs":["GOC:mtg_apoptosis","PMID:25236395","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell death","synonyms":[{"name":"accidental cell death","type":"related"},{"name":"necrosis","type":"related"}],"termid":"GO:0008219"}


id: GO:1905009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-lysine import into cell.","definition_xrefs":["GOC:TermGenie","PMID:7499219","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"regulation of L-lysine import across plasma membrane","termid":"GO:1905008"},{"relation_name":"negatively_regulates","term_name":"L-lysine import across plasma membrane","termid":"GO:0097639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of L-lysine import across plasma membrane","secondary_identifiers":["GO:0010806"],"synonyms":[{"name":"down regulation of L-lysine import into cell","type":"exact"},{"name":"down-regulation of L-lysine import into cell","type":"exact"},{"name":"downregulation of L-lysine import into cell","type":"exact"},{"name":"inhibition of L-lysine import into cell","type":"narrow"},{"name":"negative regulation of L-lysine import into cell","type":"exact"},{"name":"negative regulation of lysine import","type":"broad"},{"name":"negative regulation of lysine uptake","type":"exact"}],"termid":"GO:1905009"}


id: PBO:0076122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STXBP5 antisense RNA 1","termid":"PBO:0076122"}


id: PR:O59761
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13930:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1020.08","secondary_identifiers":["UniProtKB:O59761"],"synonyms":[{"name":"SPCC1020.08","type":"related"},{"name":"Spom972h-TYW1","type":"exact"},{"name":"tRNA wybutosine-synthesizing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59761"}


id: PBO:0051665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of CDK, cyclin A1 interacting protein 1","termid":"PBO:0051665"}


id: PBO:0042791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 170","termid":"PBO:0042791"}


id: PBO:0068326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 31","termid":"PBO:0068326"}


id: GO:0098521
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a change in post-synaptic potential that inhibits muscle contraction.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromuscular junction","termid":"GO:0031594"},{"relation_name":"is_a","term_name":"inhibitory synapse","termid":"GO:0060077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"inhibitory neuromuscular junction","termid":"GO:0098521"}


id: GO:0097725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of two methyl groups to lysine at position 79 of the histone.","definition_xrefs":["GOC:hbye","PMID:27541139"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K79 dimethylation (obsolete GO:0097725)","synonyms":[{"name":"histone H3 K79 dimethylation","type":"exact"},{"name":"histone lysine H3 K79 dimethylation","type":"exact"}],"termid":"GO:0097725"}


id: PR:Q9Y7Y5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rtt109 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Y5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase rtt109 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC342.06c","synonyms":[{"name":"Spom972h-rtt109","type":"exact"}],"termid":"PR:Q9Y7Y5"}


id: RO:0002286
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Inverse of developmentally preceded by","direct_ancestors":[{"relation_name":"is_a","term_name":"has_developmental_potential_involving","termid":"RO:0002384"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally_succeeded_by","termid":"RO:0002286"}


id: FYPO:0001636
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular glutamine level","synonyms":[{"name":"normal cellular L-glutamine level","type":"exact"},{"name":"normal cellular glutamine level during mitotic cell cycle","type":"related"},{"name":"normal cellular glutamine level during vegetative growth","type":"exact"},{"name":"normal level of glutamine in cell","type":"exact"}],"termid":"FYPO:0001636"}


id: PBO:0058022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3972","termid":"PBO:0058022"}


id: GO:0097373
data:
  {"annotated_genes":["SJAG_00884","SJAG_00857","SJAG_04210"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102465,103295,111341],"is_not":false,"summary":null,"term":"GO:0097373"}]},"cv_name":"cellular_component","definition":"A protein complex that contains Mcm4, Mcm6, and Mcm7 proteins, and possesses DNA helicase activity. In the heterohexameric MCM complex, the Mcm4/6/7 proteins form a stable core, and Mcm2, Mcm3, and Mcm5 are more peripherally associated.","definition_xrefs":["PMID:9305914","GOC:mah","PMID:10770926","PMID:15007098"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_04210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MCM core complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MCM4/6/7 complex","type":"exact"}],"termid":"GO:0097373","terms_by_termid":{"GO:0097373":null}}


id: GO:0030687
data:
  {"annotated_genes":["SJAG_03496","SJAG_04992","SJAG_03697","SJAG_00271","SJAG_04492","SJAG_01839","SJAG_02830","SJAG_01811","SJAG_03719","SJAG_03012","SJAG_01606","SJAG_04330","SJAG_01454","SJAG_02644","SJAG_04491","SJAG_02759","SJAG_02427","SJAG_01275","SJAG_02436","SJAG_03466","SJAG_01494","SJAG_00689","SJAG_03413","SJAG_04346","SJAG_00311","SJAG_00882","SJAG_00722","SJAG_04395"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78103,85689,86875,88142,88855,88949,89256,90890,94031,94037,95239,95518,96463,98581,99573,102045,104001,106865,108346,112303,112730,113364,114256,114963],"is_not":false,"summary":null,"term":"GO:0030687"},{"annotations":[84002,88051,93941],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030690"},{"annotations":[108496,84003,88052],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030691"}]},"cv_name":"cellular_component","definition":"A preribosomal complex consisting of 27SA, 27SB, and/or 7S pre-rRNA, 5S rRNA, ribosomal proteins including late-associating large subunit proteins, and associated proteins; a precursor of the eukaryotic cytoplasmic large ribosomal subunit.","definition_xrefs":["PMID:10567516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preribosome","termid":"GO:0030684"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00271":null,"SJAG_00311":null,"SJAG_00689":null,"SJAG_00722":null,"SJAG_00882":null,"SJAG_01275":null,"SJAG_01454":null,"SJAG_01494":null,"SJAG_01606":null,"SJAG_01811":null,"SJAG_01839":null,"SJAG_02427":null,"SJAG_02436":null,"SJAG_02644":null,"SJAG_02759":null,"SJAG_02830":null,"SJAG_03012":null,"SJAG_03413":null,"SJAG_03466":null,"SJAG_03496":null,"SJAG_03697":null,"SJAG_03719":null,"SJAG_04330":null,"SJAG_04346":null,"SJAG_04395":null,"SJAG_04491":null,"SJAG_04492":null,"SJAG_04992":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030684"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0030684","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"preribosome, large subunit precursor","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"66S preribosome","type":"narrow"}],"termid":"GO:0030687","terms_by_termid":{"GO:0030687":null,"GO:0030690":null,"GO:0030691":null}}


id: PBO:0027977
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H3-K4_trimethylation","termid":"PBO:0027977"}


id: PBO:0027876
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nucleosome_binding","termid":"PBO:0027876"}


id: PBO:0057259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 486-1","termid":"PBO:0057259"}


id: GO:0006631
data:
  {"annotated_genes":["SJAG_01402","SJAG_03943","SJAG_01356","SJAG_03471","SJAG_04913","SJAG_04570","SJAG_03180","SJAG_01300","SJAG_03526","SJAG_00305","SJAG_02763","SJAG_04972","SJAG_03553","SJAG_02788","SJAG_01238","SJAG_03909","SJAG_01946","SJAG_00947","SJAG_00902","SJAG_02007","SJAG_03130","SJAG_02717","SJAG_04107","SJAG_00099","SJAG_02769","SJAG_01396","SJAG_00706","SJAG_03972","SJAG_02885","SJAG_01458","SJAG_00734","SJAG_00221","SJAG_03313","SJAG_00102","SJAG_03198","SJAG_00630","SJAG_00413"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87852,89568,97280,97699,104766,111833],"is_not":false,"summary":null,"term":"GO:0006631"},{"annotations":[107895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[72181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006635"},{"annotations":[93744,98109,93383,84184,108564,96798,87490,94328,94420,91067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006633"},{"annotations":[87508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009062"},{"annotations":[94264,101928,107383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030497"},{"annotations":[85569,87988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034625"},{"annotations":[85570,87989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019367"},{"annotations":[88248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019395"},{"annotations":[93233,108750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009107"},{"annotations":[96799,93745,100384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042759"},{"annotations":[109826],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042758"},{"annotations":[109485,104417,101644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001676"},{"annotations":[107322],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045717"},{"annotations":[93747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900535"},{"annotations":[95091],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010510"},{"annotations":[69225,110470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006636"},{"annotations":[85572,87992,101930,107384,99538],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"cellular lipid metabolic process","termid":"GO:0044255"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00099":null,"SJAG_00102":null,"SJAG_00221":null,"SJAG_00305":null,"SJAG_00413":null,"SJAG_00630":null,"SJAG_00706":null,"SJAG_00734":null,"SJAG_00902":null,"SJAG_00947":null,"SJAG_01238":null,"SJAG_01300":null,"SJAG_01356":null,"SJAG_01396":null,"SJAG_01402":null,"SJAG_01458":null,"SJAG_01946":null,"SJAG_02007":null,"SJAG_02717":null,"SJAG_02763":null,"SJAG_02769":null,"SJAG_02788":null,"SJAG_02885":null,"SJAG_03130":null,"SJAG_03180":null,"SJAG_03198":null,"SJAG_03313":null,"SJAG_03471":null,"SJAG_03526":null,"SJAG_03553":null,"SJAG_03909":null,"SJAG_03943":null,"SJAG_03972":null,"SJAG_04107":null,"SJAG_04570":null,"SJAG_04913":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"fatty acid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Fatty_acid_metabolism"],"synonyms":[{"name":"fatty acid metabolism","type":"exact"}],"termid":"GO:0006631","terms_by_termid":{"GO:0001561":null,"GO:0001676":null,"GO:0006631":null,"GO:0006633":null,"GO:0006635":null,"GO:0006636":null,"GO:0009062":null,"GO:0009107":null,"GO:0010510":null,"GO:0019367":null,"GO:0019395":null,"GO:0030497":null,"GO:0034625":null,"GO:0042758":null,"GO:0042759":null,"GO:0042761":null,"GO:0045717":null,"GO:1900535":null}}


id: MOD:00274
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the hydrogen atom of a cysteine sulfanyl group with a sulfanyl group, forming a disulfanyl group, and converting an L-cysteine residue to L-cysteine persulfide.","definition_xrefs":["ChEBI:28839","PubMed:15096637","PubMed:8161529","RESID:AA0269","Unimod:421","PubMed:4276457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"thiolated residue","termid":"MOD:01886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine persulfide","synonyms":[{"name":"(R)-2-amino-3-disulfanylpropanoic acid","type":"exact"},{"name":"2-amino-3-disulfanylpropanoic acid","type":"exact"},{"name":"2-amino-3-hydrodisulfidopropanoic acid","type":"exact"},{"name":"2-amino-3-hydropersulfidopropanoic acid","type":"exact"},{"name":"2-amino-3-persulfhydrylpropanoic acid","type":"exact"},{"name":"3-(thiosulfeno)-alanine","type":"exact"},{"name":"3-disulfanylalanine","type":"exact"},{"name":"ACT_SITE Cysteine persulfide intermediate","type":"exact"},{"name":"L-cysteine persulfide","type":"exact"},{"name":"MOD_RES Cysteine persulfide","type":"exact"},{"name":"S-mercaptocysteine","type":"exact"},{"name":"S-sulfanylcysteine","type":"exact"},{"name":"Sulfide","type":"related"},{"name":"persulfide","type":"related"},{"name":"thiocysteine","type":"exact"}],"termid":"MOD:00274"}


id: PBO:0051088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy joining 1","termid":"PBO:0051088"}


id: PBO:0013796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-aminolevulinate synthase Hem1 (predicted)","termid":"PBO:0013796"}


id: PBO:0081432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 285B, pseudogene","termid":"PBO:0081432"}


id: PBO:0089151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi nucleoside-diphosphatase Gda1","termid":"PBO:0089151"}


id: PBO:0062127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily D member 7 pseudogene","termid":"PBO:0062127"}


id: PBO:0028536
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cell_tip,_with_protein_distributed_in_plasma_membrane_or_cortex","termid":"PBO:0028536"}


id: GO:0038202
data:
  {"annotated_genes":["SJAG_02426","SJAG_03371","SJAG_03720","SJAG_01983","SJAG_00457","SJAG_00824","SJAG_02765","SJAG_01142","SJAG_03928","SJAG_04496","SJAG_01032","SJAG_01184","SJAG_02723","SJAG_00209","SJAG_05184","SJAG_03355","SJAG_03501","SJAG_03072","SJAG_02231","SJAG_00167","SJAG_04249","SJAG_02424","SJAG_03405","SJAG_01320","SJAG_03089","SJAG_03799","SJAG_03486","SJAG_04910","SJAG_02605","SJAG_04394","SJAG_00688","SJAG_04235","SJAG_01047","SJAG_00561","SJAG_00875","SJAG_05346","SJAG_00169","SJAG_00991","SJAG_01703","SJAG_03678","SJAG_01509","SJAG_01187"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88136,89263,94620,102705,102731,109092,110992,113205],"is_not":false,"summary":null,"term":"GO:0038202"},{"annotations":[110046,112563,112310,103202,90232,94934,95631,97508,114293,109225,112204,92160,105726,107015,89380,84090,105317,99075,101176,110644,113121,103452],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1904262"},{"annotations":[84381,84091,103203,85485,92161,90378,94070,106597,105318,108925,114432],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1904263"},{"annotations":[103903,88944,111551,90115,101178,113869],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903432"}]},"cv_name":"biological_process","definition":"A series of intracellular molecular signals mediated by TORC1; TOR (target of rapamycin) in complex with at least Raptor (regulatory-associated protein of TOR), or orthologs of, and other signaling components.","definition_xrefs":["GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TOR signaling","termid":"GO:0031929"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00167":null,"SJAG_00169":null,"SJAG_00209":null,"SJAG_00457":null,"SJAG_00561":null,"SJAG_00688":null,"SJAG_00824":null,"SJAG_00875":null,"SJAG_00991":null,"SJAG_01032":null,"SJAG_01047":null,"SJAG_01142":null,"SJAG_01184":null,"SJAG_01187":null,"SJAG_01320":null,"SJAG_01509":null,"SJAG_01703":null,"SJAG_01983":null,"SJAG_02231":null,"SJAG_02424":null,"SJAG_02426":null,"SJAG_02605":null,"SJAG_02723":null,"SJAG_02765":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03355":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03678":null,"SJAG_03720":null,"SJAG_03799":null,"SJAG_03928":null,"SJAG_04235":null,"SJAG_04249":null,"SJAG_04394":null,"SJAG_04496":null,"SJAG_04910":null,"SJAG_05184":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"TORC1 signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"TORC1 signal transduction","type":"exact"}],"termid":"GO:0038202","terms_by_termid":{"GO:0038202":null,"GO:1903432":null,"GO:1904262":null,"GO:1904263":null}}


id: FYPO:0004543
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of heterochromatin organization is abnormal in the vegetative growth phase of the life cycle. Heterochromatin organization results in the specification, formation or maintenance of the physical structure of eukaryotic heterochromatin, a compact and highly condensed form of chromatin.","definition_xrefs":["GO:0070828","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal heterochromatin organization during vegetative growth","synonyms":[{"name":"abnormal heterochromatin organisation during vegetative growth","type":"exact"},{"name":"abnormal heterochromatin organization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004543"}


id: PBO:0074080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A51 pseudogene 4","termid":"PBO:0074080"}


id: GO:0047482
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysine + ATP + UDP-N-acetylmuramoyl-L-alanyl-D-glutamate = ADP + 2 H+ + phosphate + UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysine.","definition_xrefs":["EC:6.3.2.7","RHEA:17969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase activity","secondary_identifiers":["KEGG_REACTION:R02786","MetaCyc:6.3.2.7-RXN"],"synonyms":[{"name":"L-lysine-adding enzyme activity","type":"related"},{"name":"MurE synthetase activity","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:L-lysine gamma-ligase (ADP-forming)","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysine synthetase activity","type":"related"},{"name":"UPD-MurNAc-L-Ala-D-Glu:L-Lys ligase activity","type":"related"},{"name":"uridine diphospho-N-acetylmuramoylalanyl-D-glutamyllysine synthetase activity","type":"related"}],"termid":"GO:0047482"}


id: PBO:0084119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heme a synthase; required for the hydroxylation of heme O to form heme A, an essential prosthetic group for cytochrome c oxidase; oligomerization is required for function","termid":"PBO:0084119"}


id: GO:0009294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The direct uptake and incorporation of exogenous genetic material (DNA or RNA) into a cell from its surroundings through the cell envelope.","definition_xrefs":["PMID:27826682","PMID:12706993","PMID:24509783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"horizontal gene transfer","termid":"GO:0009292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"DNA-mediated transformation","synonyms":[{"name":"DNA mediated transformation","type":"exact"}],"termid":"GO:0009294"}


id: GO:0032292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a Schwann cell membrane closes around an axon in the peripheral nervous system. This can be a myelinating or a non-myelinating neuron-glial interaction.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon ensheathment","termid":"GO:0008366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral nervous system axon ensheathment","synonyms":[{"name":"ensheathment of axons in peripheral nervous system","type":"exact"}],"termid":"GO:0032292"}


id: GO:0050958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a stimulus relating to a magnetic field, convert it to a molecular signal, and recognize and characterize the signal. Stimuli may be chemical, mechanical or electrical and interpreting these stimuli allows an organism to determine the orientation of a magnetic field. Magnetoreception also involves the perception of light; birds cannot orient without the presence of short wavelength (blue/green) light.","definition_xrefs":["Wikipedia:Magnetoception","GOC:ai","PMID:15886990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"magnetoreception","synonyms":[{"name":"magnetoception","type":"exact"},{"name":"sensory perception of magnetic field","type":"exact"}],"termid":"GO:0050958"}


id: PBO:0011974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine diphosphokinase Tnr3/ Nudix hydrolase fusion protein","termid":"PBO:0011974"}


id: MOD:01694
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between an L-cysteine residue and the bioluminescent compound didehydrocoelenterazine to form S-(coelenterazin-3a-yl)-L-cysteine.","definition_xrefs":["ChEBI:2311","RESID:AA0526","PubMed:18997450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(coelenterazin-3a-yl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(4-hydroxyphenyl)(8-benzyl-3-oxo-6-[4-hydroxyphenyl]-3,7-dihydroimidazo[1,2-a]pyrazin-2-yl)methyl]sulfanyl)propanoic acid","type":"exact"},{"name":"MOD_RES S-(coelenterazin-3a-yl)cysteine","type":"exact"},{"name":"S-(coelenterazin-3a-yl)-L-cysteine","type":"exact"},{"name":"dehydrocoelenterazine cysteine adduct","type":"exact"},{"name":"symplectin chromophore","type":"exact"}],"termid":"MOD:01694"}


id: FYPO:0000884
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in centromere inner repeat regions occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation at centromere inner repeat during vegetative growth","termid":"FYPO:0000865"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 trimethylation at centromere during vegetative growth","termid":"FYPO:0000883"},{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation at centromere inner repeat during vegetative growth","termid":"FYPO:0008200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H3-K9 trimethylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at centromere imr during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 trimethylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me3 at centromere inner repeat during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0000884"}


id: PBO:0001474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier with solute carrier repeats (predicted)","termid":"PBO:0001474"}


id: FYPO:0007713
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell contains fewer, but larger, ERMES foci than normal. An ERMES focus is a site that contains one or more ERMES complex(es).","definition_xrefs":["PomBase:mah","PMID:33483504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"large ERMES foci present in decreased numbers","synonyms":[{"name":"enlarged ERMES foci present in decreased numbers","type":"exact"},{"name":"large ERMES foci present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"large ERMES foci present in decreased numbers during vegetative growth","type":"exact"},{"name":"large ERMES foci present in reduced numbers","type":"exact"}],"termid":"FYPO:0007713"}


id: GO:0050295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesteryl-beta-D-glucoside + H2O = D-glucose + cholesterol.","definition_xrefs":["RHEA:11956","EC:3.2.1.104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"steryl-beta-glucosidase activity","secondary_identifiers":["MetaCyc:STERYL-BETA-GLUCOSIDASE-RXN","KEGG_REACTION:R01460"],"synonyms":[{"name":"cholesteryl-beta-D-glucoside glucohydrolase activity","type":"related"},{"name":"steryl-b-glucosidase activity","type":"exact"}],"termid":"GO:0050295"}


id: GO:0032547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a purine deoxyribonucleoside, a compound consisting of a purine base linked to deoxyribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside binding","termid":"GO:0001883"},{"relation_name":"is_a","term_name":"deoxyribonucleoside binding","termid":"GO:0032546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"purine deoxyribonucleoside binding","termid":"GO:0032547"}


id: PBO:0001819
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.2.3","termid":"PBO:0001819"}


id: PBO:0055542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2978","termid":"PBO:0055542"}


id: PBO:0053937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1237","termid":"PBO:0053937"}


id: GO:0009943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the adaxial / abaxial axis. Adaxial refers to being situated toward an axis of an anatomical structure. Abaxial refers to being situated away from an axis of an anatomical structure.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"part_of","term_name":"adaxial/abaxial pattern specification","termid":"GO:0009955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adaxial/abaxial axis specification","synonyms":[{"name":"adaxial/abaxial determination","type":"related"}],"termid":"GO:0009943"}


id: PBO:0070013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1310, pseudogene","termid":"PBO:0070013"}


id: GO:0008851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ethanolamine = acetaldehyde + NH3.","definition_xrefs":["EC:4.3.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"ethanolamine ammonia-lyase activity","secondary_identifiers":["MetaCyc:ETHAMLY-RXN","RHEA:15313"],"synonyms":[{"name":"ethanolamine ammonia-lyase (acetaldehyde-forming) activity","type":"related"},{"name":"ethanolamine deaminase activity","type":"related"}],"termid":"GO:0008851"}


id: PBO:0027612
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_gamma-tubulin_complex_assembly","termid":"PBO:0027612"}


id: GO:0060848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involved in cell fate commitment of an endothelial cell. Once determination has taken place, a cell becomes committed to differentiate down a particular pathway regardless of its environment.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"endothelial cell fate commitment","termid":"GO:0060839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell fate determination","termid":"GO:0060848"}


id: PATO:0001135
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001135 ig d concentration (obsolete PATO:0001135)","termid":"PATO:0001135"}


id: GO:0046881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of follicle-stimulating hormone.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gonadotropin secretion","termid":"GO:0032278"},{"relation_name":"is_a","term_name":"regulation of follicle-stimulating hormone secretion","termid":"GO:0046880"},{"relation_name":"positively_regulates","term_name":"follicle-stimulating hormone secretion","termid":"GO:0046884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of follicle-stimulating hormone secretion","synonyms":[{"name":"activation of follicle-stimulating hormone secretion","type":"narrow"},{"name":"positive regulation of follicle stimulating hormone secretion","type":"exact"},{"name":"stimulation of follicle-stimulating hormone secretion","type":"narrow"},{"name":"up regulation of follicle-stimulating hormone secretion","type":"exact"},{"name":"up-regulation of follicle-stimulating hormone secretion","type":"exact"},{"name":"upregulation of follicle-stimulating hormone secretion","type":"exact"}],"termid":"GO:0046881"}


id: PBO:0083557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene INP52; identified in a screen for mutants with decreased levels of rDNA transcription","termid":"PBO:0083557"}


id: PBO:0078747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 10B","termid":"PBO:0078747"}


id: PBO:0001253
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.3.1","termid":"PBO:0001253"}


id: GO:1990797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The controlled release of cholecystokinin from a cell. Cholecystokinin is a peptide hormone that participates in pancreatic enzyme release in the gut and is also found in the brain.","definition_xrefs":["PMID:2755938"],"gene_count":0,"genotype_count":0,"name":"obsolete cholecystokinin secretion (obsolete GO:1990797)","synonyms":[{"name":"CCK secretion","type":"exact"}],"termid":"GO:1990797"}


id: GO:0016429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing N1-methyladenine.","definition_xrefs":["EC:2.1.1.36"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA (adenine-N1)-methyltransferase activity (obsolete GO:0016429)","synonyms":[{"name":"1-methyladenine transfer RNA methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:tRNA (adenine-1-N-)-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:tRNA (adenine-N1-)-methyltransferase activity","type":"related"},{"name":"adenine-1-methylase activity","type":"related"},{"name":"tRNA (adenine-N1-)-methyltransferase activity","type":"exact"},{"name":"transfer RNA (adenine-1) methyltransferase activity","type":"related"},{"name":"transfer ribonucleate adenine 1-methyltransferase activity","type":"related"}],"termid":"GO:0016429"}


id: PBO:0078669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 3-4","termid":"PBO:0078669"}


id: PBO:0047272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 247 member D","termid":"PBO:0047272"}


id: GO:0005191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete acidic epididymal glycoprotein (obsolete GO:0005191)","synonyms":[{"name":"acidic epididymal glycoprotein","type":"exact"}],"termid":"GO:0005191"}


id: PBO:0055438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2869","termid":"PBO:0055438"}


id: FYPO:0000141
data:
  {"alleles_by_uniquename":{"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115373,115371,115372],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"FYPO:0000671"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation is abnormal. Mitotic sister chromatid segregation is the entire process in which replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle.","definition_xrefs":["GO:0000070","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome segregation","termid":"FYPO:0000029"},{"relation_name":"is_a","term_name":"abnormal mitosis","termid":"FYPO:0000337"},{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"part_of","term_name":"abnormal mitosis","termid":"FYPO:0000337"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03449":null},"genotype_count":3,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000641","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic sister chromatid segregation","references_by_uniquename":{"PMID:24184107":null},"secondary_identifiers":["FYPO:0001359"],"single_locus_annotated_genes":["SJAG_03449"],"single_locus_genotype_uniquenames":["Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","man1delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal chromosome segregation during vegetative growth","type":"exact"},{"name":"abnormal mitotic chromosome segregation","type":"exact"},{"name":"abnormal mitotic sister chromatid segregation during vegetative growth","type":"exact"},{"name":"abnormal sister chromatid segregation during mitotic cell cycle","type":"related"},{"name":"centromere function defective during vegetative growth","type":"related"},{"name":"chromosome segregation defects during vegetative growth","type":"exact"},{"name":"chromosome segregation defects, mitotic","type":"exact"},{"name":"mitotic chromosome missegregation","type":"related"},{"name":"mitotic sister chromatid missegregation","type":"related"}],"termid":"FYPO:0000141","terms_by_termid":{"FYPO:0000671":null}}


id: FYPO:0001274
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to hypoxia is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"altered protein level during cellular response to hypoxia","termid":"FYPO:0001549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level during cellular response to hypoxia","synonyms":[{"name":"decreased protein accumulation during cellular response to hypoxia","type":"related"},{"name":"decreased protein level during cellular response to hypoxia during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to hypoxia during vegetative growth","type":"exact"},{"name":"decreased protein level during cellular response to hypoxic stress","type":"exact"},{"name":"decreased protein level during cellular response to lowered oxygen tension","type":"exact"},{"name":"reduced protein level during cellular response to hypoxia","type":"exact"}],"termid":"FYPO:0001274"}


id: PBO:0027598
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_cell_division_site","termid":"PBO:0027598"}


id: GO:0007454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from the labial disc are generated and organized. This includes the transformation of a labial imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into recognizable adult structures including parts of the proboscis.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"},{"relation_name":"part_of","term_name":"labial disc development","termid":"GO:0035217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"labial disc morphogenesis","synonyms":[{"name":"labial disc metamorphosis","type":"exact"}],"termid":"GO:0007454"}


id: GO:0010907
data:
  {"annotated_genes":["SJAG_05006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001172"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of glucose metabolism. Glucose metabolic processes are the chemical reactions and pathways involving glucose, the aldohexose gluco-hexose.","definition_xrefs":["GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucose metabolic process","termid":"GO:0010906"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"glucose metabolic process","termid":"GO:0006006"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glucose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of glucose metabolism","type":"exact"}],"termid":"GO:0010907","terms_by_termid":{"GO:2001172":null}}


id: PBO:0081102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger E-box binding homeobox 2","termid":"PBO:0081102"}


id: PBO:0087453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a complex with Ctf8p; shares some subunits with Replication Factor C and is required for sister chromatid cohesion; may have overlapping functions with Rad24p in the DNA damage replication checkpoint","termid":"PBO:0087453"}


id: GO:1903058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of melanosome organization.","definition_xrefs":["GO_REF:0000058","PMID:24769727","GOC:rl","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of melanosome organization","termid":"GO:1903056"},{"relation_name":"positively_regulates","term_name":"melanosome organization","termid":"GO:0032438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of melanosome organization","synonyms":[{"name":"activation of melanosome organisation","type":"narrow"},{"name":"activation of melanosome organization","type":"narrow"},{"name":"activation of melanosome organization and biogenesis","type":"related"},{"name":"positive regulation of melanosome organisation","type":"exact"},{"name":"positive regulation of melanosome organization and biogenesis","type":"related"},{"name":"up regulation of melanosome organisation","type":"exact"},{"name":"up regulation of melanosome organization","type":"exact"},{"name":"up regulation of melanosome organization and biogenesis","type":"related"},{"name":"up-regulation of melanosome organisation","type":"exact"},{"name":"up-regulation of melanosome organization","type":"exact"},{"name":"up-regulation of melanosome organization and biogenesis","type":"related"},{"name":"upregulation of melanosome organisation","type":"exact"},{"name":"upregulation of melanosome organization","type":"exact"},{"name":"upregulation of melanosome organization and biogenesis","type":"related"}],"termid":"GO:1903058"}


id: PBO:0088787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit G","termid":"PBO:0088787"}


id: PBO:0046122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E pseudogene 1","termid":"PBO:0046122"}


id: PBO:0041659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit gamma 4","termid":"PBO:0041659"}


id: GO:0060474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the controlled movement of a flagellated sperm cell is initiated as part of the process required for flagellated sperm to reach fertilization competence.","definition_xrefs":["GOC:cilia","GOC:krc","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"is_a","term_name":"positive regulation of flagellated sperm motility","termid":"GO:1902093"},{"relation_name":"part_of","term_name":"sperm capacitation","termid":"GO:0048240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of flagellated sperm motility involved in capacitation","synonyms":[{"name":"positive regulation of sperm motility involved in capacitation","type":"related"}],"termid":"GO:0060474"}


id: GO:0015278
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a channel that opens when a specific intracellular ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly ligand-gated monoatomic ion channel activity","termid":"GO:0005217"},{"relation_name":"is_a","term_name":"ligand-gated calcium channel activity","termid":"GO:0099604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"intracellularly gated calcium channel activity","secondary_identifiers":["GO:0005218","Reactome:R-HSA-9717215"],"synonyms":[{"name":"calcium-release channel activity","type":"exact"},{"name":"intracellular ligand-gated calcium channel activity","type":"related"}],"termid":"GO:0015278"}


id: PBO:0054365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1758","termid":"PBO:0054365"}


id: PBO:0060927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFAT activating protein with ITAM motif 1","termid":"PBO:0060927"}


id: PBO:0052148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel interacting protein 3","termid":"PBO:0052148"}


id: GO:1900902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hexadecanal biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of hexadecanal metabolic process","termid":"GO:1900905"},{"relation_name":"regulates","term_name":"hexadecanal biosynthetic process","termid":"GO:0006634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hexadecanal biosynthetic process","synonyms":[{"name":"regulation of hexadecanal anabolism","type":"exact"},{"name":"regulation of hexadecanal biosynthesis","type":"exact"},{"name":"regulation of hexadecanal formation","type":"exact"},{"name":"regulation of hexadecanal synthesis","type":"exact"},{"name":"regulation of palmitaldehyde biosynthesis","type":"exact"},{"name":"regulation of palmitaldehyde biosynthetic process","type":"exact"}],"termid":"GO:1900902"}


id: PBO:0043312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride intracellular channel 4 pseudogene 1","termid":"PBO:0043312"}


id: FYPO:0004242
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during the S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity during mitotic interphase","termid":"FYPO:0003331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein kinase activity during mitotic S phase","synonyms":[{"name":"reduced protein kinase activity during mitotic S phase","type":"exact"}],"termid":"FYPO:0004242"}


id: PBO:0030401
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_SAGA_complex_assembly","termid":"PBO:0030401"}


id: PBO:0075234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 6 pseudogene 1","termid":"PBO:0075234"}


id: MOD:00279
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to N-pyruvic acid 2-iminyl-L-cysteine.","definition_xrefs":["PubMed:1388164","Unimod:422#C","RESID:AA0274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"pyruvic acid iminylated residue","termid":"MOD:01170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-pyruvic acid 2-iminyl-L-cysteine","synonyms":[{"name":"(R)-2-(1-carboxy-2-sulfanylethanimino)propanoic acid","type":"exact"},{"name":"MOD_RES N-pyruvate 2-iminyl-cysteine","type":"exact"},{"name":"N-pyruvic acid 2-iminyl","type":"related"},{"name":"N-pyruvic acid 2-iminyl-L-cysteine","type":"exact"},{"name":"PyruvicAcidIminyl","type":"related"}],"termid":"MOD:00279"}


id: GO:0021534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population in the hindbrain.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural precursor cell proliferation","termid":"GO:0061351"},{"relation_name":"part_of","term_name":"hindbrain development","termid":"GO:0030902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation in hindbrain","termid":"GO:0021534"}


id: PBO:0089071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phospholipid scramblase","termid":"PBO:0089071"}


id: GO:1990686
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-lipid-RNA complex containing separate low-density lipoprotein (LDL), lipid and RNA molecules. Separate in this context means not covalently bound to each other.","definition_xrefs":["GOC:vesicles","PMID:23559634"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lipid-RNA complex","termid":"GO:1990684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"LDL-containing protein-lipid-RNA complex","termid":"GO:1990686"}


id: PBO:0070428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose-5-phosphate-3-epimerase pseudogene 6","termid":"PBO:0070428"}


id: PBO:0054552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1953","termid":"PBO:0054552"}


id: GO:0050823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the structure and integrity of a peptide antigen and preventing it from being degraded.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide stabilization","termid":"GO:0050822"},{"relation_name":"part_of","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide antigen stabilization","synonyms":[{"name":"peptide antigen stabilization activity","type":"related"}],"termid":"GO:0050823"}


id: FYPO:0006194
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is spherical, and undergoes one or two rounds of cell division before all cells die, and some cells lyse.","definition_xrefs":["PMID:12456722","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, single or double cell division, abnormal cell shape","termid":"FYPO:0002421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0000004","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division, spherical cell with cell lysis","synonyms":[{"name":"inviable following spore germination, single or double cell division, spherical cell with cell lysis","type":"exact"},{"name":"inviable germinated spore, single or double cell division, spherical cell with cell lysis","type":"exact"},{"name":"lethal after spore germination, single or double cell division, spherical cell with cell lysis","type":"exact"}],"termid":"FYPO:0006194"}


id: GO:1902545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of DNA N-glycosylase activity.","definition_xrefs":["GOC:rph","PMID:15518571","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of DNA N-glycosylase activity (obsolete GO:1902545)","synonyms":[{"name":"down regulation of DNA N-glycosylase activity","type":"exact"},{"name":"down regulation of DNA glycosylase activity","type":"exact"},{"name":"down regulation of endonuclease VIII activity","type":"related"},{"name":"down-regulation of DNA N-glycosylase activity","type":"exact"},{"name":"down-regulation of DNA glycosylase activity","type":"exact"},{"name":"down-regulation of endonuclease VIII activity","type":"related"},{"name":"downregulation of DNA N-glycosylase activity","type":"exact"},{"name":"downregulation of DNA glycosylase activity","type":"exact"},{"name":"downregulation of endonuclease VIII activity","type":"related"},{"name":"inhibition of DNA N-glycosylase activity","type":"narrow"},{"name":"inhibition of DNA glycosylase activity","type":"narrow"},{"name":"inhibition of endonuclease VIII activity","type":"related"},{"name":"negative regulation of DNA glycosylase activity","type":"exact"},{"name":"negative regulation of endonuclease VIII activity","type":"related"}],"termid":"GO:1902545"}


id: GO:0051621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of the neurotransmitter norepinephrine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"norepinephrine uptake","termid":"GO:0051620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of norepinephrine uptake","synonyms":[{"name":"regulation of levarterenol uptake","type":"exact"},{"name":"regulation of noradrenaline uptake","type":"exact"},{"name":"regulation of norepinephrine import","type":"exact"}],"termid":"GO:0051621"}


id: GO:0002879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an acute inflammatory response to a non-antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of acute inflammatory response","termid":"GO:0002675"},{"relation_name":"is_a","term_name":"regulation of acute inflammatory response to non-antigenic stimulus","termid":"GO:0002877"},{"relation_name":"positively_regulates","term_name":"acute inflammatory response to non-antigenic stimulus","termid":"GO:0002525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of acute inflammatory response to non-antigenic stimulus","synonyms":[{"name":"activation of acute inflammatory response to non-antigenic stimulus","type":"narrow"},{"name":"stimulation of acute inflammatory response to non-antigenic stimulus","type":"narrow"},{"name":"up regulation of acute inflammatory response to non-antigenic stimulus","type":"exact"},{"name":"up-regulation of acute inflammatory response to non-antigenic stimulus","type":"exact"},{"name":"upregulation of acute inflammatory response to non-antigenic stimulus","type":"exact"}],"termid":"GO:0002879"}


id: PBO:0051046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 1-20","termid":"PBO:0051046"}


id: GO:0031516
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The function of absorbing and responding to electromagnetic radiation with a wavelength of approximately 730nm. The response may involve a change in conformation.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"red or far-red light photoreceptor activity","termid":"GO:0009883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"far-red light photoreceptor activity","termid":"GO:0031516"}


id: SO:0002172
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_alteration where the source of the alteration is due to an artifact in the base-calling or assembly process.","direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_difference","termid":"SO:0000413"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_alteration_artifact","synonyms":[{"name":"sequence alteration artifact","type":"exact"}],"termid":"SO:0002172"}


id: GO:0038064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a collagen and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:uh","PMID:21568710","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"collagen receptor activity","synonyms":[{"name":"transmembrane collagen receptor activity","type":"exact"}],"termid":"GO:0038064"}


id: GO:0031928
data:
  {"annotated_genes":["SJAG_02152","SJAG_03652","SJAG_02962","SJAG_03808"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86210,86211,113552,114819],"is_not":false,"summary":null,"term":"GO:0031928"}]},"cv_name":"molecular_function","definition":"Enables the transfer of pyridoxine from one side of a membrane to the other. Pyridoxine, 2-methyl-3-hydroxy-4,5-bis(hydroxymethyl)pyridine, is one of the vitamin B6 compounds. Pyridoxal, pyridoxamine and pyridoxine are collectively known as vitamin B6, and are efficiently converted to the biologically active form of vitamin B6, pyridoxal phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transmembrane transporter activity","termid":"GO:1901618"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02152":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"pyridoxine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyridoxine transporter activity","type":"broad"}],"termid":"GO:0031928","terms_by_termid":{"GO:0031928":null}}


id: GO:0009018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose + phosphate = D-fructose + alpha-D-glucose 1-phosphate.","definition_xrefs":["EC:2.4.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,4-alpha-oligoglucan phosphorylase activity","termid":"GO:0004645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"sucrose phosphorylase activity","secondary_identifiers":["RHEA:24048","MetaCyc:SUCROSE-PHOSPHORYLASE-RXN"],"synonyms":[{"name":"disaccharide glucosyltransferase activity","type":"broad"},{"name":"sucrose glucosyltransferase activity","type":"related"},{"name":"sucrose:phosphate alpha-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0009018"}


id: PBO:0003738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP dehydrogenase Gua1 (predicted)","termid":"PBO:0003738"}


id: PBO:0069625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 902, pseudogene","termid":"PBO:0069625"}


id: PBO:0042066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 136","termid":"PBO:0042066"}


id: PBO:0082530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell-wall L-asparaginase II involved in asparagine catabolism; expression induced during nitrogen starvation; ORF contains a short non-coding RNA that enhances expression of full-length gene; likely arose in via horizontal gene transfer from the wine yeast Wickerhamomyces anomalus or a close relative; reference strain S288C has four copies of ASP3; ASP3-1 has a paralog, ASP3-3, that arose from a segmental duplication","termid":"PBO:0082530"}


id: GO:0051567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of one or more methyl groups to lysine at position 9 of the histone.","definition_xrefs":["GOC:pr","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K9 methylation (obsolete GO:0051567)","synonyms":[{"name":"histone H3 K9 methylation","type":"exact"},{"name":"histone H3K9me","type":"exact"},{"name":"histone lysine H3 K9 methylation","type":"exact"}],"termid":"GO:0051567"}


id: GO:0015252
data:
  {"annotated_genes":["SJAG_02598","SJAG_00542","SJAG_MIT09","SJAG_00133","SJAG_03114","SJAG_04122","SJAG_00836","SJAG_MIT37","SJAG_02564","SJAG_00915","SJAG_02105","SJAG_07003","SJAG_00438","SJAG_03925","SJAG_00985","SJAG_05204","SJAG_MIT15"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90900,111917,89333,99721,115127,99102,103957,115133,104843,115139,85197,88908,97878,101053,89928,88909,99750,103867],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046933"}]},"cv_name":"molecular_function","definition":"Enables the facilitated diffusion of a hydrogen ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism.","definition_xrefs":["GOC:pr","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation channel activity","termid":"GO:0005261"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"proton channel activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9729542","RHEA:34979"],"synonyms":[{"name":"hydrogen ion channel activity","type":"exact"}],"termid":"GO:0015252","terms_by_termid":{"GO:0046933":null}}


id: GO:0045780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bone resorption.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bone resorption","termid":"GO:0045124"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"bone resorption","termid":"GO:0045453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bone resorption","synonyms":[{"name":"activation of bone resorption","type":"narrow"},{"name":"stimulation of bone resorption","type":"narrow"},{"name":"up regulation of bone resorption","type":"exact"},{"name":"up-regulation of bone resorption","type":"exact"},{"name":"upregulation of bone resorption","type":"exact"}],"termid":"GO:0045780"}


