# terms

id: GO:1905951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA recombination that takes place in mitochondrion.","definition_xrefs":["GO_REF:0000062","PMID:8087883","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"},{"relation_name":"is_a","term_name":"mitochondrial DNA metabolic process","termid":"GO:0032042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259","GO:0007005"],"is_obsolete":false,"name":"mitochondrion DNA recombination","synonyms":[{"name":"DNA recombination in mitochondria","type":"exact"}],"termid":"GO:1905951"}


id: GO:0140363
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein granule located in the cytoplasm that is formed by the RNA-binding protein TIS11B and RNA molecules, enriched in membrane protein-encoding mRNAs with multiple AU-rich elements. TIS granules are reticular meshworks intertwined with the endoplasmic reticulum (ER).","definition_xrefs":["PMID:30449617","PMID:30479375","Wikipedia:TIGER_domain"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ribonucleoprotein granule","termid":"GO:0036464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"TIS granule","termid":"GO:0140363"}


id: PBO:0059313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L53","termid":"PBO:0059313"}


id: GO:0007270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of synaptic transmission from a neuron to another neuron across a synapse.","definition_xrefs":["GOC:add","GOC:jl","GOC:dos","MeSH:D009435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"neuron-neuron synaptic transmission","synonyms":[{"name":"nerve-nerve synaptic transmission","type":"related"}],"termid":"GO:0007270"}


id: GO:1904139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microglial cell migration.","definition_xrefs":["GOC:BHF","GOC:nc","PMID:19100238","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glial cell migration","termid":"GO:1903975"},{"relation_name":"is_a","term_name":"regulation of macrophage migration","termid":"GO:1905521"},{"relation_name":"regulates","term_name":"microglial cell migration","termid":"GO:1904124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of microglial cell migration","termid":"GO:1904139"}


id: PBO:0059736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 10","termid":"PBO:0059736"}


id: SO:0002134
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A constant (C) gene, a gene that codes the constant region of a T-cell receptor chain.","definition_xrefs":["IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php","GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T_cell_receptor_gene","termid":"SO:0002133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TR_C_Gene","synonyms":[{"name":"T_cell_receptor_C_gene","type":"exact"}],"termid":"SO:0002134"}


id: PBO:0064163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IVA","termid":"PBO:0064163"}


id: PBO:0061738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexophilin and PC-esterase domain family member 2","termid":"PBO:0061738"}


id: PBO:0016519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi localized Arf binding gamma-adaptin ortholog Gga21","termid":"PBO:0016519"}


id: PBO:0051026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein 6","termid":"PBO:0051026"}


id: FYPO:0004585
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of linear elements is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal linear element morphology","termid":"FYPO:0004585"}


id: PBO:0041049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain containing 7","termid":"PBO:0041049"}


id: GO:0000709
data:
  {"annotated_genes":["SJAG_04950","SJAG_00623","SJAG_02708","SJAG_03221","SJAG_03751","SJAG_01044","SJAG_02267","SJAG_01708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84549,88929,92985,96606,97579,103720,106357,113178],"is_not":false,"summary":null,"term":"GO:0000709"}]},"cv_name":"biological_process","definition":"The conversion of the paired broken DNA and homologous duplex DNA into a four-stranded branched intermediate, known as a joint molecule, formed during meiotic recombination. These joint molecules contain Holliday junctions on either side of heteroduplex DNA.","definition_xrefs":["PMID:8521495","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00623":null,"SJAG_01044":null,"SJAG_01708":null,"SJAG_02267":null,"SJAG_02708":null,"SJAG_03221":null,"SJAG_03751":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0006259","GO:0006310","GO:0140013"],"is_obsolete":false,"name":"meiotic joint molecule formation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000709","terms_by_termid":{"GO:0000709":null}}


id: PBO:0034485
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_meiosis_I","termid":"PBO:0034485"}


id: PBO:0043637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coordinator of PRMT5 and differentiation stimulator","termid":"PBO:0043637"}


id: PBO:0003209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP protein Utp15 (predicted)","termid":"PBO:0003209"}


id: GO:1901649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of actomyosin contractile ring localization.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of actomyosin contractile ring localization (obsolete GO:1901649)","termid":"GO:1901649"}


id: PR:Q9P6N7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A threonine aspartase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01085","PANTHER:PTHR10188:SF8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine aspartase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.09c","secondary_identifiers":["UniProtKB:Q9P6N7"],"synonyms":[{"name":"Spom972h-TASP1","type":"exact"},{"name":"taspase-1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6N7"}


id: PBO:0027439
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitochondrial_protein_level","termid":"PBO:0027439"}


id: GO:2001228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to gamma radiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to gamma radiation","termid":"GO:0010332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to gamma radiation","synonyms":[{"name":"regulation of response to gamma ray","type":"related"},{"name":"regulation of response to gamma-ray photon","type":"related"}],"termid":"GO:2001228"}


id: PBO:0057363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ag-1","termid":"PBO:0057363"}


id: _global:has_part_structure_that_is_capable_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"s 'has part structure that is capable of' p if and only if there exists some part x such that s 'has part' x and x 'capable of' p","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_material_entity_and_a_process","termid":"_global:causal_relation_between_material_entity_and_a_process"},{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_part_structure_that_is_capable_of","secondary_identifiers":["RO:0002584"],"termid":"_global:has_part_structure_that_is_capable_of"}


id: PBO:0049196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor delta type subunit 2","termid":"PBO:0049196"}


id: PBO:0036164
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_spindle_elongation_without_chromosome_separation_with_centromeric_DNA_associated_with_spindle","termid":"PBO:0036164"}


id: GO:0042072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cell adhesion receptor inhibitor activity (obsolete GO:0042072)","synonyms":[{"name":"cell adhesion receptor inhibitor activity","type":"exact"}],"termid":"GO:0042072"}


id: GO:0060235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling at short range between the head ectoderm and the optic vesicle that results in the head ectoderm forming a lens.","definition_xrefs":["GOC:dph","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental induction","termid":"GO:0031128"},{"relation_name":"part_of","term_name":"lens morphogenesis in camera-type eye","termid":"GO:0002089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens induction in camera-type eye","termid":"GO:0060235"}


id: FYPO:0000806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which Golgi organization is abnormal. Golgi organization results in the assembly, arrangement of constituent parts, or disassembly of the Golgi apparatus.","definition_xrefs":["GO:0007030","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endomembrane system organization","termid":"FYPO:0000804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal Golgi organization","synonyms":[{"name":"abnormal Golgi organisation","type":"exact"},{"name":"abnormal Golgi organization during mitotic cell cycle","type":"related"},{"name":"abnormal Golgi organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000806"}


id: PBO:0043034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 4C","termid":"PBO:0043034"}


id: GO:0061329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a Malpighian tubule principal cell. A Malpighian tubule principal cell is an epithelial secretory cell that transports cations into the lumen of the tubule.","definition_xrefs":["GOC:dph","PMID:19783135","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"part_of","term_name":"Malpighian tubule development","termid":"GO:0072002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Malpighian tubule principal cell differentiation","termid":"GO:0061329"}


id: PBO:0080078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 40","termid":"PBO:0080078"}


id: PBO:0113555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase compex delta subunit, Swp1","termid":"PBO:0113555"}


id: SO:0001852
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence ACAAT, found in promoters of mating type M-specific genes in fission yeast and bound by the transcription factor Mat1-Mc.","definition_xrefs":["PMID:9233811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating_type_M_box","synonyms":[{"name":"mating type M-box","type":"exact"}],"termid":"SO:0001852"}


id: GO:0097016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a L27 domain of a protein. L27 is composed of conserved negatively charged amino acids and a conserved aromatic amino acid. L27 domains can assemble proteins involved in signaling and establishment and maintenance of cell polarity into complexes by interacting in a heterodimeric manner.","definition_xrefs":["GOC:BHF","PMID:15241471","PMID:17237226","Prosite:PDOC51022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"L27 domain binding","termid":"GO:0097016"}


id: GO:0061073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the ciliary body generated and organized. The ciliary body is the circumferential tissue inside the eye composed of the ciliary muscle and ciliary processes.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"camera-type eye morphogenesis","termid":"GO:0048593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ciliary body morphogenesis","termid":"GO:0061073"}


id: PBO:0058759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6883","termid":"PBO:0058759"}


id: PBO:0000423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase regulatory subunit Reg1 (predicted)","termid":"PBO:0000423"}


id: PBO:0075654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splA/ryanodine receptor domain and SOCS box containing 3","termid":"PBO:0075654"}


id: PBO:0029934
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mononucleate_monoseptate_vegetative_cell","termid":"PBO:0029934"}


id: FYPO:0003581
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Kms1 accumulates is greater than normal.","definition_xrefs":["PomBase:mah","PMID:24943839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased number of Kms1 foci","synonyms":[{"name":"increased number of Kms1 foci during mitotic cell cycle","type":"related"},{"name":"increased number of Kms1 foci during vegetative growth","type":"exact"}],"termid":"FYPO:0003581"}


id: GO:0042908
data:
  {"annotated_genes":["SJAG_03363","SJAG_01145","SJAG_03951"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114022,92555,113100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990961"}]},"cv_name":"biological_process","definition":"The directed movement of a xenobiotic into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A xenobiotic is a compound foreign to the organism exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GOC:go_curators","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01145":null,"SJAG_03363":null,"SJAG_03951":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"xenobiotic transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015893"],"synonyms":[{"name":"drug transport","type":"related"}],"termid":"GO:0042908","terms_by_termid":{"GO:1990961":null}}


id: PR:Q9P7N2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vas2(aps1) gene.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 complex subunit sigma-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.06c","secondary_identifiers":["UniProtKB:Q9P7N2"],"synonyms":[{"name":"SPAP27G11.06c","type":"related"},{"name":"Spom972h-vas2(aps1)","type":"exact"},{"name":"aps1","type":"related"},{"name":"sigma1-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"valproic acid-sensitive protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7N2"}


id: FYPO:0002336
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the silent mating-type cassettes is normal (i.e. indistinguishable from wild type). Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin silencing","termid":"FYPO:0002335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal chromatin silencing at silent mating-type cassette","synonyms":[{"name":"normal chromatin silencing at mating-type region heterochromatin","type":"exact"},{"name":"normal chromatin silencing at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"normal chromatin silencing at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0002336"}


id: PBO:0040581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bile acid-CoA:amino acid N-acyltransferase","termid":"PBO:0040581"}


id: PBO:0040975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BNIP3 pseudogene 46","termid":"PBO:0040975"}


id: PBO:0044277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine receptor 1","termid":"PBO:0044277"}


id: PBO:0057082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 181b-1","termid":"PBO:0057082"}


id: GO:0035138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the pectoral fin are generated and organized. Pectoral fins are bilaterally paired fins mounted laterally and located behind the gill covers of fish. These fins are used for lateral mobility and propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fin morphogenesis","termid":"GO:0033334"},{"relation_name":"part_of","term_name":"pectoral fin development","termid":"GO:0033339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pectoral fin morphogenesis","termid":"GO:0035138"}


id: GO:0014007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of microglia differentiation, the process in which a relatively unspecialized cell acquires specialized features of a microglial cell.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microglia differentiation","termid":"GO:0014006"},{"relation_name":"is_a","term_name":"negative regulation of macrophage differentiation","termid":"GO:0045650"},{"relation_name":"is_a","term_name":"negative regulation of glial cell differentiation","termid":"GO:0045686"},{"relation_name":"negatively_regulates","term_name":"microglia differentiation","termid":"GO:0014004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of microglia differentiation","synonyms":[{"name":"down regulation of microglia differentiation","type":"exact"},{"name":"down-regulation of microglia differentiation","type":"exact"},{"name":"downregulation of microglia differentiation","type":"exact"},{"name":"inhibition of microglia differentiation","type":"narrow"},{"name":"negative regulation of microglial cell differentiation","type":"exact"}],"termid":"GO:0014007"}


id: GO:0006971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hypotonic environment, i.e. an environment with a lower concentration of solutes than the organism or cell.","definition_xrefs":["PMID:12598593","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to osmotic stress","termid":"GO:0006970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypotonic response","synonyms":[{"name":"hypo-osmotic response","type":"exact"}],"termid":"GO:0006971"}


id: GO:0035624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a receptor is activated by another receptor. Receptor transactivation can occur through different mechanisms and includes cross-talk between signaling pathways where one receptor activates a receptor for a different ligand, and also activation of subunits within a receptor oligomer.","definition_xrefs":["PMID:16870826","GOC:BHF","GOC:al","GOC:bf","PMID:21063387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signaling receptor activity","termid":"GO:2000273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"receptor transactivation","termid":"GO:0035624"}


id: GO:0034428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of the mRNA transcript body that occurs when the 5' end is not protected by a 5'-cap; degradation proceeds in the 5' to 3' direction.","definition_xrefs":["GOC:krc","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear-transcribed mRNA catabolic process, exonucleolytic, 5'-3' (obsolete GO:0034428)","termid":"GO:0034428"}


id: PBO:0047138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM174A divergent transcript","termid":"PBO:0047138"}


id: GO:0016138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycosides, compounds in which a glycosyl group is substituted into a hydroxyl, thiol or selenol group in another compound.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside metabolic process","termid":"GO:0016137"},{"relation_name":"is_a","term_name":"glycosyl compound biosynthetic process","termid":"GO:1901659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycoside biosynthetic process","secondary_identifiers":["GO:0016141"],"synonyms":[{"name":"O-glycoside anabolism","type":"exact"},{"name":"O-glycoside biosynthesis","type":"exact"},{"name":"O-glycoside biosynthetic process","type":"exact"},{"name":"O-glycoside formation","type":"exact"},{"name":"O-glycoside synthesis","type":"exact"},{"name":"glycoside anabolism","type":"exact"},{"name":"glycoside biosynthesis","type":"exact"},{"name":"glycoside formation","type":"exact"},{"name":"glycoside synthesis","type":"exact"}],"termid":"GO:0016138"}


id: PBO:0067756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 55","termid":"PBO:0067756"}


id: FYPO:0002136
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which an RNA catabolic process is abnormal.","definition_xrefs":["GO:0006401","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype during vegetative growth","termid":"FYPO:0001347"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal RNA catabolic process","termid":"FYPO:0003551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal RNA catabolic process during vegetative growth","synonyms":[{"name":"abnormal RNA breakdown during vegetative growth","type":"exact"},{"name":"abnormal RNA catabolic process during mitotic cell cycle","type":"related"},{"name":"abnormal RNA catabolism during vegetative growth","type":"exact"},{"name":"abnormal RNA degradation during vegetative growth","type":"exact"}],"termid":"FYPO:0002136"}


id: PBO:0034463
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_phosphorylation_during_cellular_response_to_bleomycin","termid":"PBO:0034463"}


id: GO:0060951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neural crest cell acquires the specialized features of a glial cell of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac glial cell differentiation","termid":"GO:0060950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest-derived cardiac glial cell differentiation","termid":"GO:0060951"}


id: PBO:0086548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YDR278C is not an essential gene","termid":"PBO:0086548"}


id: FYPO:0006429
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in subtelomeric regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation at subtelomeric heterochromatin during vegetative growth","termid":"FYPO:0005864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K9 dimethylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"normal histone H3 K9 methylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at subtelomeres during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 methylation at telomeric heterochromatin during vegetative growth","type":"related"},{"name":"normal histone H3K9me2 at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 methylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0006429"}


id: PBO:0004401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex non-SMC subunit Cnd1","termid":"PBO:0004401"}


id: PBO:0068605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 56, pseudogene","termid":"PBO:0068605"}


id: GO:0016109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tetraterpenoid compounds, terpenoids with eight isoprene units.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetraterpenoid metabolic process","termid":"GO:0016108"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"tetraterpenoid biosynthetic process","synonyms":[{"name":"tetraterpene biosynthesis","type":"narrow"},{"name":"tetraterpene biosynthetic process","type":"narrow"},{"name":"tetraterpenoid anabolism","type":"exact"},{"name":"tetraterpenoid biosynthesis","type":"exact"},{"name":"tetraterpenoid formation","type":"exact"},{"name":"tetraterpenoid synthesis","type":"exact"}],"termid":"GO:0016109"}


id: GO:0031346
data:
  {"annotated_genes":["SJAG_02379","SJAG_01794","SJAG_00514","SJAG_03453","SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107426,89530,83963,85933,86902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the process involved in the formation, arrangement of constituent parts, or disassembly of cell projections.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection organization","termid":"GO:0031344"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"positively_regulates","term_name":"cell projection organization","termid":"GO:0030030"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell projection organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell projection organization","type":"narrow"},{"name":"positive regulation of cell projection organisation","type":"exact"},{"name":"positive regulation of cell projection organization and biogenesis","type":"related"},{"name":"stimulation of cell projection organization","type":"narrow"},{"name":"up regulation of cell projection organization","type":"exact"},{"name":"up-regulation of cell projection organization","type":"exact"},{"name":"upregulation of cell projection organization","type":"exact"}],"termid":"GO:0031346","terms_by_termid":{"GO:1902917":null}}


id: GO:2000793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cell proliferation that is involved in heart valve development.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"heart valve development","termid":"GO:0003170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in heart valve development","synonyms":[{"name":"cell proliferation of cardiac valve development","type":"exact"},{"name":"cell proliferation of heart valve development","type":"exact"}],"termid":"GO:2000793"}


id: PBO:0035709
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_cytoplasmic_microtubule","termid":"PBO:0035709"}


id: PBO:0060938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFE2L1 divergent transcript","termid":"PBO:0060938"}


id: GO:0060068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reproductive developmental process whose specific outcome is the progression of the vagina over time, from its formation to the mature structure.","definition_xrefs":["GOC:ebc","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female genitalia development","termid":"GO:0030540"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vagina development","termid":"GO:0060068"}


id: PBO:0079126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teashirt zinc finger homeobox 2","termid":"PBO:0079126"}


id: PBO:0057065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 147b","termid":"PBO:0057065"}


id: PBO:0025476
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysinuric protein intolerance","termid":"PBO:0025476"}


id: PBO:0086722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; non-essential gene identified in a screen for mutants with increased levels of rDNA transcription; weak similarity with uridine kinases and with phosphoribokinases","termid":"PBO:0086722"}


id: GO:0046092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving deoxycytidine, 2-deoxyribosylcytosine, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside metabolic process","termid":"GO:0046125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"deoxycytidine metabolic process","synonyms":[{"name":"deoxycytidine metabolism","type":"exact"}],"termid":"GO:0046092"}


id: PBO:0082429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Blocked reading frame, contains two in-frame stops in translation; this ORF is conserved, without the stops, in Saccharomyces paradoxus, S. mikatae, and S. bayanus; RNA sequencing data indicate the presence of a transcription unit at this reading frame","termid":"PBO:0082429"}


id: PBO:0026721
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_oligomerization","termid":"PBO:0026721"}


id: PBO:0045728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 7","termid":"PBO:0045728"}


id: PATO:0002409
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Bounded structure filled with fluid.","definition_xrefs":["PATOC:MPATH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure, cavities","termid":"PATO:0002014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluid-filled","termid":"PATO:0002409"}


id: GO:0002122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Aggressive behavior associated with attempts to flee from a threat.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aggressive behavior","termid":"GO:0002118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fear-induced aggressive behavior","synonyms":[{"name":"fear-induced aggression","type":"exact"}],"termid":"GO:0002122"}


id: FYPO:0004372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to the mitotic G2 DNA damage checkpoint is decreased. The mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the mitotic cell cycle in response to DNA damage. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["GO:0072435","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G2 DNA damage checkpoint","termid":"FYPO:0004373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000631","FYPO:0000298"],"is_obsolete":false,"name":"decreased response to mitotic G2 DNA damage checkpoint signaling","synonyms":[{"name":"decreased G2 DNA damage checkpoint during mitotic cell cycle","type":"related"},{"name":"decreased mitotic G2 DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"reduced response to mitotic G2 DNA damage checkpoint signaling","type":"exact"}],"termid":"FYPO:0004372"}


id: GO:0008993
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-rhamnulose = ADP + L-rhamnulose 1-phosphate.","definition_xrefs":["EC:2.7.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"carbohydrate kinase activity","termid":"GO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"rhamnulokinase activity","secondary_identifiers":["MetaCyc:RHAMNULOKIN-RXN","RHEA:20117"],"synonyms":[{"name":"ATP:L-rhamnulose 1-phosphotransferase activity","type":"related"},{"name":"L-rhamnulokinase activity","type":"related"},{"name":"L-rhamnulose kinase activity","type":"related"},{"name":"RhuK","type":"related"},{"name":"rhamnulokinase (phosphorylating)","type":"related"},{"name":"rhamnulose kinase activity","type":"related"}],"termid":"GO:0008993"}


id: GO:1900719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of uterine smooth muscle relaxation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of relaxation of smooth muscle","termid":"GO:1901080"},{"relation_name":"regulates","term_name":"uterine smooth muscle relaxation","termid":"GO:0044558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of uterine smooth muscle relaxation","synonyms":[{"name":"regulation of smooth muscle relaxation of the uterus","type":"exact"}],"termid":"GO:1900719"}


id: GO:0035507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of myosin-light-chain-phosphatase activity.","definition_xrefs":["GOC:bf","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of myosin-light-chain-phosphatase activity (obsolete GO:0035507)","termid":"GO:0035507"}


id: PBO:0002334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ureidoglycolate hydrolase (predicted)","termid":"PBO:0002334"}


id: GO:0003112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secretion of epinephrine from nerve endings increases the rate of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heart rate by epinephrine","termid":"GO:0003065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heart rate by neuronal epinephrine","synonyms":[{"name":"positive regulation of heart rate by neuronal adrenaline","type":"exact"}],"termid":"GO:0003112"}


id: GO:0039661
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer, i.e. cytoplasm-facing in a cellular organelle, lipid bilayer of an organelle envelope, occurring in a host cell.","definition_xrefs":["GOC:bf","GOC:ch"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host outer membrane","termid":"GO:0044384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host organelle outer membrane","termid":"GO:0039661"}


id: PBO:0000549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine carboxypeptidase Sxa2","termid":"PBO:0000549"}


id: PBO:0058505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5695","termid":"PBO:0058505"}


id: PBO:0071011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 13","termid":"PBO:0071011"}


id: PBO:0111894
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat protein","termid":"PBO:0111894"}


id: GO:0051021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a GDP-dissociation inhibitor protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"GDP-dissociation inhibitor binding","synonyms":[{"name":"GDI binding","type":"exact"}],"termid":"GO:0051021"}


id: PR:O14009
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29A4.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear speckle splicing regulatory protein 1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.06c","synonyms":[{"name":"Spom972h-SPAC29A4.06c","type":"exact"},{"name":"coiled-coil domain-containing protein 55 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14009"}


id: SO:0001669
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The minimal portion of the promoter required to properly initiate transcription in RNA polymerase II transcribed genes.","definition_xrefs":["PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNApol_II_core_promoter","synonyms":[{"name":"RNApol II core promoter","type":"exact"}],"termid":"SO:0001669"}


id: PBO:0050721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 7","termid":"PBO:0050721"}


id: PBO:0040656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBOX1 antisense RNA 1","termid":"PBO:0040656"}


id: PBO:0042158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 19","termid":"PBO:0042158"}


id: GO:0006250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete CDP reduction (obsolete GO:0006250)","synonyms":[{"name":"CDP reduction","type":"exact"}],"termid":"GO:0006250"}


id: PBO:0081436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF286A-TBC1D26 readthrough (NMD candidate)","termid":"PBO:0081436"}


id: MOD:00220
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to a 4-hydroxy-L-arginine.","definition_xrefs":["PubMed:10966817","RESID:AA0215","PubMed:7650037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"hydroxylated arginine","termid":"MOD:00682"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-hydroxy-L-arginine","synonyms":[{"name":"(2S,4Xi)-2-amino-5-[(diaminomethylidene)amino]-4-hydroxypentanoic acid","type":"exact"},{"name":"2-amino-5-(carbamimidamido)-4-hydroxypentanoic acid [tautomer]","type":"exact"},{"name":"2-amino-5-[(aminoiminomethyl)amino]-4-hydroxypentanoic acid [tautomer]","type":"exact"},{"name":"2-amino-5-guanidino-4-hydroxypentanoic acid","type":"exact"},{"name":"4-hydroxy-L-arginine","type":"exact"},{"name":"4-hydroxylated L-arginine","type":"exact"},{"name":"4HyArg","type":"exact"},{"name":"C(gamma)-hydroxyarginine","type":"exact"},{"name":"MOD_RES 4-hydroxyarginine","type":"exact"},{"name":"gamma-hydroxyarginine","type":"exact"}],"termid":"MOD:00220"}


id: PR:Q9Y7Q6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Q6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain-containing protein 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC297.04c","synonyms":[{"name":"Spom972h-set7","type":"exact"}],"termid":"PR:Q9Y7Q6"}


id: GO:1902413
data:
  {"annotated_genes":["SJAG_03048","SJAG_04943","SJAG_04551","SJAG_00845","SJAG_01386","SJAG_01464"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88892,95728,98208,98431,103147],"is_not":false,"summary":null,"term":"GO:1902413"},{"annotations":[98430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[99765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903472"},{"annotations":[98435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905757"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mitotic cytokinesis.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokinesis","termid":"GO:0032466"},{"relation_name":"is_a","term_name":"regulation of mitotic cytokinesis","termid":"GO:1902412"},{"relation_name":"negatively_regulates","term_name":"mitotic cytokinesis","termid":"GO:0000281"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_01386":null,"SJAG_01464":null,"SJAG_03048":null,"SJAG_04551":null,"SJAG_04943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"negatively_regulates","termid":"GO:0000281"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000281","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mitotic cytokinesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cytokinesis after mitosis","type":"exact"},{"name":"down regulation of mitotic cytokinesis","type":"exact"},{"name":"down-regulation of cytokinesis after mitosis","type":"exact"},{"name":"down-regulation of mitotic cytokinesis","type":"exact"},{"name":"downregulation of cytokinesis after mitosis","type":"exact"},{"name":"downregulation of mitotic cytokinesis","type":"exact"},{"name":"inhibition of cytokinesis after mitosis","type":"narrow"},{"name":"inhibition of mitotic cytokinesis","type":"narrow"},{"name":"negative regulation of cytokinesis after mitosis","type":"exact"}],"termid":"GO:1902413","terms_by_termid":{"GO:1902413":null,"GO:1903472":null,"GO:1903500":null,"GO:1905757":null}}


id: PBO:0083956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP dissociation inhibitor; regulates vesicle traffic in secretory pathways by regulating the dissociation of GDP from the Sec4/Ypt/rab family of GTP binding proteins","termid":"PBO:0083956"}


id: GO:0033488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cholesterol, cholest-5-en-3 beta-ol, via the intermediate 24,25-dihydrolanosterol.","definition_xrefs":["GOC:mah","MetaCyc:PWY66-3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol biosynthetic process","termid":"GO:0006695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"cholesterol biosynthetic process via 24,25-dihydrolanosterol","synonyms":[{"name":"cholesterol anabolism via 24,25-dihydrolanosterol","type":"exact"},{"name":"cholesterol biosynthesis via 24,25-dihydrolanosterol","type":"exact"},{"name":"cholesterol formation via 24,25-dihydrolanosterol","type":"exact"},{"name":"cholesterol synthesis via 24,25-dihydrolanosterol","type":"exact"}],"termid":"GO:0033488"}


id: PBO:0004917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain protein 2","termid":"PBO:0004917"}


id: GO:1901007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving (S)-scoulerine.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00319"],"gene_count":0,"genotype_count":0,"name":"obsolete (S)-scoulerine metabolic process (obsolete GO:1901007)","synonyms":[{"name":"(S)-scoulerine metabolism","type":"exact"}],"termid":"GO:1901007"}


id: GO:0102824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: quercetin-7-olate + UDP-L-rhamnose = H+ + quercetin 3-O-rhamnoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-L-rhamnose:quercetin 3-O-rhamnosyltransferase activity (obsolete GO:0102824)","termid":"GO:0102824"}


id: GO:1901844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell communication by electrical coupling involved in cardiac conduction.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:TermGenie","PMID:17130302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication by electrical coupling","termid":"GO:0010649"},{"relation_name":"regulates","term_name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell communication by electrical coupling involved in cardiac conduction","termid":"GO:1901844"}


id: GO:0031249
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a denatured protein.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"denatured protein binding","termid":"GO:0031249"}


id: PBO:0015682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion defective protein","termid":"PBO:0015682"}


id: PBO:0049094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 151","termid":"PBO:0049094"}


id: PBO:0084078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein that couples the Ski complex and exosome; putative pseudo-translational GTPase involved in 3'-to-5' mRNA decay pathway; interacts with both the cytoplasmic exosome and the Ski complex; eRF3-like domain targets nonstop mRNA for degradation; null mutants have a superkiller phenotype; SKI7 has a paralog, HBS1, that arose from the whole genome duplication","termid":"PBO:0084078"}


id: GO:0008951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a palmitoleoyl-[acyl-carrier protein] + alpha-KDO-(2->4)-alpha-KDO-(2->6)-lipid IVA = KDO2-(palmitoleoyl)-lipid IVA + a holo-[acyl-carrier protein].","definition_xrefs":["MetaCyc:PALMITOTRANS-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity","secondary_identifiers":["RHEA:44012"],"synonyms":[{"name":"palmitoleoyl ACP-dependent acyltransferase activity","type":"exact"}],"termid":"GO:0008951"}


id: GO:0097330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 5-fluoro-2'-deoxyuridine stimulus. 5-fluoro-2'-deoxyuridine is a pyrimidine 2'-deoxyribonucleoside compound having 5-fluorouracil as the nucleobase; it is used to treat hepatic metastases of gastrointestinal adenocarcinomas and for palliation in malignant neoplasms of the liver and gastrointestinal tract.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 5-fluoro-2'-deoxyuridine","termid":"GO:0097330"}


id: SO:0001902
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region surrounding a cis_splice site, either within 1-3 bases of the exon or 3-8 bases of the intron.","definition_xrefs":["SO:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript_region","termid":"SO:0000835"},{"relation_name":"part_of","term_name":"primary_transcript","termid":"SO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_region","synonyms":[{"name":"splice region","type":"related"}],"termid":"SO:0001902"}


id: GO:0009494
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete chloroplast-type ferredoxin (obsolete GO:0009494)","synonyms":[{"name":"chloroplast-type ferredoxin","type":"exact"}],"termid":"GO:0009494"}


id: PBO:0090548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S17","termid":"PBO:0090548"}


id: PBO:0083548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps uncharacterized ORF YDL063C; YDL062W is not essential","termid":"PBO:0083548"}


id: PBO:0091112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger, Sec23/Sec24-type","termid":"PBO:0091112"}


id: PR:Q9USJ7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nro1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USJ7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of ofd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.07","synonyms":[{"name":"Spom972h-nro1","type":"exact"}],"termid":"PR:Q9USJ7"}


id: GO:1901533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hematopoietic progenitor cell differentiation.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901532"},{"relation_name":"negatively_regulates","term_name":"hematopoietic progenitor cell differentiation","termid":"GO:0002244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hematopoietic progenitor cell differentiation","synonyms":[{"name":"down regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"down regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"down regulation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"down regulation of hemopoietic progenitor cell differentiation","type":"exact"},{"name":"down-regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"down-regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"down-regulation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"down-regulation of hemopoietic progenitor cell differentiation","type":"exact"},{"name":"downregulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"downregulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"downregulation of hematopoietic progenitor cell differentiation","type":"related"},{"name":"downregulation of hemopoietic progenitor cell differentiation","type":"exact"},{"name":"inhibition of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"inhibition of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"inhibition of hematopoietic progenitor cell differentiation","type":"related"},{"name":"inhibition of hemopoietic progenitor cell differentiation","type":"narrow"},{"name":"negative regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"negative regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"negative regulation of hemopoietic progenitor cell differentiation","type":"exact"}],"termid":"GO:1901533"}


id: PBO:0050072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox containing 1","termid":"PBO:0050072"}


id: GO:1990072
data:
  {"annotated_genes":["SJAG_04837","SJAG_02525","SJAG_01415","SJAG_00850","SJAG_02655","SJAG_03467","SJAG_00820","SJAG_04021"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84729,93376,95166,98591,99805,100938,101008,105875],"is_not":false,"summary":null,"term":"GO:1990072"}]},"cv_name":"cellular_component","definition":"A complex that functions in anterograde transport at the Golgi and also regulates autophagy. In yeast it includes at least the following subunits: Bet3 (as homodimer), Bet5, Trs20, Trs23, Trs31, Trs33, Trs85. TRAPPIII may include further, as yet undescribed, proteins.","definition_xrefs":["PMID:22669257","GOC:bhm","PMID:20375281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TRAPP complex","termid":"GO:0030008"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00820":null,"SJAG_00850":null,"SJAG_01415":null,"SJAG_02525":null,"SJAG_02655":null,"SJAG_03467":null,"SJAG_04021":null,"SJAG_04837":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005794","GO:0032991"],"is_obsolete":false,"name":"TRAPPIII protein complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990072","terms_by_termid":{"GO:1990072":null}}


id: PBO:0070502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 1","termid":"PBO:0070502"}


id: PBO:0061638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 16 like 2, pseudogene","termid":"PBO:0061638"}


id: PBO:0002735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S30 (predicted)","termid":"PBO:0002735"}


id: GO:1900499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of butyryl-CoA catabolic process to butanol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"positive regulation of purine nucleotide catabolic process","termid":"GO:0033123"},{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of fatty acid metabolic process","termid":"GO:0045923"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"positive regulation of lipid catabolic process","termid":"GO:0050996"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"regulation of butyryl-CoA catabolic process to butanol","termid":"GO:1900497"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"butyryl-CoA catabolic process to butanol","termid":"GO:0044582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044248","GO:0006790","GO:0055086","GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of butyryl-CoA catabolic process to butanol","synonyms":[{"name":"activation of butyryl-CoA catabolic process to butanol","type":"narrow"},{"name":"activation of butyryl-CoA catabolism to butanol","type":"exact"},{"name":"positive regulation of butyryl-CoA catabolism to butanol","type":"exact"},{"name":"up regulation of butyryl-CoA catabolic process to butanol","type":"exact"},{"name":"up regulation of butyryl-CoA catabolism to butanol","type":"exact"},{"name":"up-regulation of butyryl-CoA catabolic process to butanol","type":"exact"},{"name":"up-regulation of butyryl-CoA catabolism to butanol","type":"exact"},{"name":"upregulation of butyryl-CoA catabolic process to butanol","type":"exact"},{"name":"upregulation of butyryl-CoA catabolism to butanol","type":"exact"}],"termid":"GO:1900499"}


id: GO:0001025
data:
  {"annotated_genes":["SJAG_03007"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001156"}]},"cv_name":"molecular_function","definition":"Binding to an RNA polymerase III transcription factor, a protein required to initiate or regulate transcription by RNA polymerase III.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"general transcription initiation factor binding","termid":"GO:0140296"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"RNA polymerase III general transcription initiation factor binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"RNA polymerase III transcription factor binding","type":"broad"}],"termid":"GO:0001025","terms_by_termid":{"GO:0001156":null}}


id: PBO:0030932
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glutamate-ammonia_ligase_activity","termid":"PBO:0030932"}


id: PBO:0030768
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_stress_during_vegetative_growth","termid":"PBO:0030768"}


id: PR:Q10250
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A disco-interacting protein 2 homolog B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C56F8.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.02","secondary_identifiers":["UniProtKB:Q10250"],"synonyms":[{"name":"Spom972h-DIP2B","type":"exact"}],"termid":"PR:Q10250"}


id: PBO:0079156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 15","termid":"PBO:0079156"}


id: PBO:0072727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ryanodine receptor 2","termid":"PBO:0072727"}


id: PBO:0110386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3123","termid":"PBO:0110386"}


id: GO:0032866
data:
  {"annotated_genes":["SJAG_04660","SJAG_03958"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91816,97241],"is_not":false,"summary":null,"term":"GO:0032866"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-xylitol + NADP+ = D-xylose + NADPH + H+.","definition_xrefs":["PMID:15184173","RHEA:27445","PMID:12724380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldose reductase (NADPH) activity","termid":"GO:0004032"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03958":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"D-xylose reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-8773"],"synonyms":[{"name":"D-xylose reductase activity","type":"broad"},{"name":"D-xylose:NADP reductase activity","type":"exact"},{"name":"xylose reductase activity","type":"broad"}],"termid":"GO:0032866","terms_by_termid":{"GO:0032866":null}}


id: SO:0001244
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The 60-70 nucleotide region remain after Drosha processing of the primary transcript, that folds back upon itself to form a hairpin structure.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA_primary_transcript_region","termid":"SO:0001243"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre_miRNA","synonyms":[{"name":"pre-miRNA","type":"exact"}],"termid":"SO:0001244"}


id: PBO:0004264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ypt1","termid":"PBO:0004264"}


id: PBO:0036455
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human COQ8","termid":"PBO:0036455"}


id: GO:0030583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the myxococcal fruiting body over time, from its formation to the mature structure. The process begins when myxococci respond to a lack of nutrients in the environment and ends when the myxococcal fruiting body is a mature structure.","definition_xrefs":["GOC:mtg_sensu","ISBN:0815316194","PMID:11121786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"},{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myxococcal fruiting body development","secondary_identifiers":["GO:0055084"],"synonyms":[{"name":"fruiting body development in cellular response to starvation","type":"broad"},{"name":"fruiting body development in response to starvation","type":"broad"}],"termid":"GO:0030583"}


id: GO:0005608
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha1, beta2 and gamma1 polypeptide chains.","definition_xrefs":["MEDLINE:95005761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"laminin-3 complex","synonyms":[{"name":"laminin-121 complex","type":"exact"}],"termid":"GO:0005608"}


id: GO:1902772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of phosphorelay signal transduction system that is involved in hydrogen peroxide mediated signaling pathway.","definition_xrefs":["PMID:18406331","GOC:TermGenie","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphorelay signal transduction system involved in hydrogen peroxide mediated signaling pathway (obsolete GO:1902772)","synonyms":[{"name":"activation of two-component signal transduction involved in H2O2 mediated signaling pathway","type":"narrow"},{"name":"activation of two-component signal transduction involved in hydrogen peroxide mediated signaling pathway","type":"narrow"},{"name":"activation of two-component signal transduction involved in hydrogen peroxide mediated signalling pathway","type":"narrow"},{"name":"positive regulation of histidyl-aspartyl phosphorelay involved in H2O2 mediated signaling pathway","type":"exact"},{"name":"positive regulation of histidyl-aspartyl phosphorelay involved in hydrogen peroxide mediated signaling pathway","type":"exact"},{"name":"positive regulation of histidyl-aspartyl phosphorelay involved in hydrogen peroxide mediated signalling pathway","type":"exact"},{"name":"positive regulation of phosphorelay signal transduction system involved in H2O2 mediated signaling pathway","type":"exact"},{"name":"positive regulation of phosphorelay signal transduction system involved in hydrogen peroxide mediated signalling pathway","type":"exact"},{"name":"positive regulation of two-component signal transduction system (phosphorelay) involved in H2O2 mediated signaling pathway","type":"narrow"},{"name":"positive regulation of two-component signal transduction system (phosphorelay) involved in hydrogen peroxide mediated signaling pathway","type":"narrow"},{"name":"positive regulation of two-component signal transduction system (phosphorelay) involved in hydrogen peroxide mediated signalling pathway","type":"narrow"},{"name":"stimulation of two-component signal transduction involved in H2O2 mediated signaling pathway","type":"narrow"},{"name":"stimulation of two-component signal transduction involved in hydrogen peroxide mediated signaling pathway","type":"narrow"},{"name":"stimulation of two-component signal transduction involved in hydrogen peroxide mediated signalling pathway","type":"narrow"},{"name":"up regulation of two-component signal transduction involved in H2O2 mediated signaling pathway","type":"exact"},{"name":"up regulation of two-component signal transduction involved in hydrogen peroxide mediated signaling pathway","type":"exact"},{"name":"up regulation of two-component signal transduction involved in hydrogen peroxide mediated signalling pathway","type":"exact"},{"name":"up-regulation of two-component signal transduction involved in H2O2 mediated signaling pathway","type":"exact"},{"name":"up-regulation of two-component signal transduction involved in hydrogen peroxide mediated signaling pathway","type":"exact"},{"name":"up-regulation of two-component signal transduction involved in hydrogen peroxide mediated signalling pathway","type":"exact"},{"name":"upregulation of two-component signal transduction involved in H2O2 mediated signaling pathway","type":"exact"},{"name":"upregulation of two-component signal transduction involved in hydrogen peroxide mediated signaling pathway","type":"exact"},{"name":"upregulation of two-component signal transduction involved in hydrogen peroxide mediated signalling pathway","type":"exact"}],"termid":"GO:1902772"}


id: GO:1905239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of canonical Wnt signaling pathway involved in osteoblast differentiation.","definition_xrefs":["GO_REF:0000058","PMID:19342382","GOC:BHF","GOC:BHF_miRNA","GOC:rph","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of canonical Wnt signaling pathway involved in osteoblast differentiation (obsolete GO:1905239)","synonyms":[{"name":"regulation of canonical Wnt receptor signaling pathway involved in osteoblast differentiation","type":"exact"},{"name":"regulation of canonical Wnt receptor signalling pathway involved in osteoblast differentiation","type":"exact"},{"name":"regulation of canonical Wnt-activated signaling pathway involved in osteoblast differentiation","type":"exact"}],"termid":"GO:1905239"}


id: GO:0071056
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to the transmembrane metallopeptidase ADAM15.","definition_xrefs":["PMID:11882657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alpha9-beta1 integrin-ADAM15 complex","synonyms":[{"name":"ITGA9-ITGB1-ADAM15 complex","type":"narrow"}],"termid":"GO:0071056"}


id: PBO:0051436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-19","termid":"PBO:0051436"}


id: GO:0044214
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plasma membrane consisting of gene products and protein complexes that have some part that spans both leaflets of the membrane.","definition_xrefs":["GOC:ecd"],"gene_count":0,"genotype_count":0,"name":"obsolete spanning component of plasma membrane (obsolete GO:0044214)","synonyms":[{"name":"fully spanning plasma membrane","type":"exact"},{"name":"transmembrane","type":"related"}],"termid":"GO:0044214"}


id: PBO:0064037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 71","termid":"PBO:0064037"}


id: PBO:0066751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 49","termid":"PBO:0066751"}


id: PBO:0077773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of outer mitochondrial membrane 40 like","termid":"PBO:0077773"}


id: GO:0097444
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialization of the endomembrane system found in some classes of dendritic spines consisting of two or more closely apposed lamellae with interspersed electron dense material. The endomembrane component is continuous with the smooth endoplasmic reticulum.","definition_xrefs":["NIF_Subcellular:sao725931194","PMID:20400711","PMID:8987748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane-bounded organelle","termid":"GO:0043227"},{"relation_name":"part_of","term_name":"endomembrane system","termid":"GO:0012505"},{"relation_name":"part_of","term_name":"dendritic spine","termid":"GO:0043197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spine apparatus","synonyms":[{"name":"dense material","type":"narrow"}],"termid":"GO:0097444"}


id: PBO:0081633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF561 antisense RNA 1 (head to head)","termid":"PBO:0081633"}


id: PR:Q10324
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17G8.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.12","synonyms":[{"name":"Spom972h-sec3","type":"exact"}],"termid":"PR:Q10324"}


id: PBO:0078038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 28","termid":"PBO:0078038"}


id: GO:1990173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within the nucleoplasm.","definition_xrefs":["GOC:mah","PMID:22918952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to nucleus","termid":"GO:0034504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to nucleoplasm","secondary_identifiers":["GO:0032066"],"synonyms":[{"name":"nucleolus to nucleoplasm transport","type":"related"},{"name":"protein localisation to nucleoplasm","type":"exact"}],"termid":"GO:1990173"}


id: PBO:0040351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g like","termid":"PBO:0040351"}


id: GO:0008552
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: Me2+(in) + ATP = Me2+(out) + ADP + phosphate, where Me is Zn2+, Cd2+, Co2+, Ni2+ or Pb2+.","definition_xrefs":["TC:3.A.3.6.2"],"gene_count":0,"genotype_count":0,"name":"obsolete zinc, cadmium, cobalt, nickel, lead-efflux ATPase activity (obsolete GO:0008552)","synonyms":[{"name":"zinc, cadmium, cobalt, nickel, lead-efflux ATPase activity","type":"exact"}],"termid":"GO:0008552"}


id: PBO:0055385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2815","termid":"PBO:0055385"}


id: PBO:0049913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEXIM P-TEFb complex subunit 1","termid":"PBO:0049913"}


id: PR:O14463
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thioredoxin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01101","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.07c","secondary_identifiers":["UniProtKB:O14463"],"synonyms":[{"name":"Spom972h-TXN","type":"exact"},{"name":"TR-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Trx-1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14463"}


id: PR:O74510
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bqt3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bouquet formation protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC594.07c","synonyms":[{"name":"Spom972h-bqt3","type":"exact"}],"termid":"PR:O74510"}


id: PBO:0063492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ and LIM domain 1 pseudogene 3","termid":"PBO:0063492"}


id: PBO:0073581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shisa like 2B","termid":"PBO:0073581"}


id: GO:0070329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The substitution of a selenium atom for a sulfur atom in a ribonucleotide in a tRNA molecule.","definition_xrefs":["PMID:14594807","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenium compound metabolic process","termid":"GO:0001887"},{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"tRNA seleno-modification","synonyms":[{"name":"tRNA base modification to selenouridine","type":"exact"}],"termid":"GO:0070329"}


id: PBO:0043111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHUK divergent transcript","termid":"PBO:0043111"}


id: PBO:0046044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit C","termid":"PBO:0046044"}


id: FYPO:0002509
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the palmitoylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein modification","termid":"FYPO:0002499"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation","termid":"FYPO:0002503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"increased protein palmitoylation","termid":"FYPO:0002509"}


id: PBO:0081342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 142","termid":"PBO:0081342"}


id: PBO:0054185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1560","termid":"PBO:0054185"}


id: GO:1902517
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of glycerol-3-phosphate-transporting ATPase activity.","definition_xrefs":["PMID:23013274","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-binding cassette (ABC) transporter complex","termid":"GO:0043190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"glycerol-3-phosphate-transporting ATPase complex","termid":"GO:1902517"}


id: PBO:0046376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTR1 pseudogene 2","termid":"PBO:0046376"}


id: PBO:0029036
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cell_surface","termid":"PBO:0029036"}


id: PBO:0041936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 4","termid":"PBO:0041936"}


id: PR:O94652
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleoporin GLE1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12960:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin gle1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31E1.05","secondary_identifiers":["UniProtKB:O94652"],"synonyms":[{"name":"RNA export factor gle1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC31E1.05","type":"related"},{"name":"Spom972h-GLE1","type":"exact"},{"name":"nuclear pore protein gle1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94652"}


id: GO:0042855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of eugenol, a colorless, aromatic, liquid hydrocarbon (C10H12O2) found in clove oil.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"eugenol metabolic process","termid":"GO:0042854"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"eugenol biosynthetic process","synonyms":[{"name":"4-allyl-2-methoxyphenol biosynthesis","type":"exact"},{"name":"4-allyl-2-methoxyphenol biosynthetic process","type":"exact"},{"name":"eugenic acid biosynthesis","type":"exact"},{"name":"eugenic acid biosynthetic process","type":"exact"},{"name":"eugenol anabolism","type":"exact"},{"name":"eugenol biosynthesis","type":"exact"},{"name":"eugenol formation","type":"exact"},{"name":"eugenol synthesis","type":"exact"}],"termid":"GO:0042855"}


id: SO:0001628
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant located in the intergenic region, between genes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_variant","termid":"SO:0001878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intergenic_variant","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://snpeff.sourceforge.net/SnpEff_manual.html","http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp"],"synonyms":[{"name":"ANNOVAR:intergenic","type":"related"},{"name":"Jannovar:intergenic_variant","type":"exact"},{"name":"Seattleseq:intergenic","type":"exact"},{"name":"VEP:intergenic_variant","type":"exact"},{"name":"intergenic","type":"exact"},{"name":"intergenic variant","type":"exact"},{"name":"snpEff:INTERGENIC","type":"exact"}],"termid":"SO:0001628"}


id: FYPO:0005493
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the transport of proteins or other substances from the endosome to the Golgi is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vesicle-mediated transport during vegetative growth","termid":"FYPO:0006432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000138","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal endosome to Golgi transport","synonyms":[{"name":"normal endosome to Golgi protein transport","type":"narrow"},{"name":"normal endosome to Golgi transport during mitotic cell cycle","type":"related"},{"name":"normal endosome to Golgi transport during vegetative growth","type":"exact"},{"name":"normal retrograde transport, endosome to Golgi","type":"exact"}],"termid":"FYPO:0005493"}


id: GO:0008892
data:
  {"annotated_genes":["SJAG_01997"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111099],"is_not":false,"summary":null,"term":"GO:0008892"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: guanine + H2O = xanthine + NH3.","definition_xrefs":["EC:3.5.4.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"guanine deaminase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:14665","MetaCyc:GUANINE-DEAMINASE-RXN","Reactome:R-HSA-74255"],"synonyms":[{"name":"GAH activity","type":"related"},{"name":"guanase activity","type":"related"},{"name":"guanine aminase activity","type":"related"},{"name":"guanine aminohydrolase activity","type":"related"}],"termid":"GO:0008892","terms_by_termid":{"GO:0008892":null}}


id: PBO:0004056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein involved in cytochrome oxidase biogenesis Cmc1 (predicted)","termid":"PBO:0004056"}


id: PBO:0059643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 9","termid":"PBO:0059643"}


id: GO:1904674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of somatic stem cell population maintenance.","definition_xrefs":["GOC:BHF_miRNA","GOC:rph","GOC:TermGenie","GO_REF:0000058","PMID:19409607","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of stem cell population maintenance","termid":"GO:1902459"},{"relation_name":"is_a","term_name":"regulation of somatic stem cell population maintenance","termid":"GO:1904672"},{"relation_name":"positively_regulates","term_name":"somatic stem cell population maintenance","termid":"GO:0035019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of somatic stem cell population maintenance","synonyms":[{"name":"activation of somatic stem cell population maintenance","type":"narrow"},{"name":"up regulation of somatic stem cell population maintenance","type":"exact"},{"name":"up-regulation of somatic stem cell population maintenance","type":"exact"},{"name":"upregulation of somatic stem cell population maintenance","type":"exact"}],"termid":"GO:1904674"}


id: PBO:0040553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6","termid":"PBO:0040553"}


id: GO:0030153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that mediates resistance to a bacteriocin: any of a heterogeneous group of polypeptide antibiotics that are secreted by certain bacterial strains and are able to kill cells of other susceptible (frequently related) strains after adsorption at specific receptors on the cell surface. They include the colicins, and their mechanisms of action vary.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin metabolic process","termid":"GO:0009404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"bacteriocin immunity","termid":"GO:0030153"}


id: GO:1903006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein K63-linked deubiquitination.","definition_xrefs":["GOC:TermGenie","GOC:PARL","GO_REF:0000058","GOC:bf","PMID:22970133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein deubiquitination","termid":"GO:1903003"},{"relation_name":"is_a","term_name":"regulation of protein K63-linked deubiquitination","termid":"GO:1903004"},{"relation_name":"positively_regulates","term_name":"protein K63-linked deubiquitination","termid":"GO:0070536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0070647"},{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"positive regulation of protein K63-linked deubiquitination","synonyms":[{"name":"activation of protein K63-linked deubiquitination","type":"narrow"},{"name":"up regulation of protein K63-linked deubiquitination","type":"exact"},{"name":"up-regulation of protein K63-linked deubiquitination","type":"exact"},{"name":"upregulation of protein K63-linked deubiquitination","type":"exact"}],"termid":"GO:1903006"}


id: GO:0061586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA-dependent transcription using a mechanism that involves the localization of a transcription factor.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006355","GO:0051179","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"positive regulation of transcription by transcription factor localization","termid":"GO:0061586"}


id: PBO:0060496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 1 pseudogene 1","termid":"PBO:0060496"}


id: PBO:0050335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 37","termid":"PBO:0050335"}


id: GO:0102517
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: oleoyl-CoA + NADH + O2 + H+ = ricinoleyl-CoA + NAD + H2O.","definition_xrefs":["EC:1.14.13.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oleate 12-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14487"],"termid":"GO:0102517"}


id: GO:0061115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the proximal/distal axis of the lung. The proximal/distal axis of the lung is defined by a line that runs from the trachea to the alveoli.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal/distal axis specification","termid":"GO:0009946"},{"relation_name":"is_a","term_name":"lung pattern specification process","termid":"GO:0060432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung proximal/distal axis specification","termid":"GO:0061115"}


id: PBO:0087533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Nup84p subcomplex of nuclear pore complex (NPC); contributes to nucleocytoplasmic transport, NPC biogenesis; is involved in establishment of a normal nucleocytoplasmic concentration gradient of GTPase Gsp1p; also plays roles in several processes that may require localization of genes or chromosomes at nuclear periphery, including double-strand break repair, transcription and chromatin silencing; relocalizes to cytosol in response to hypoxia; homolog of human NUP133","termid":"PBO:0087533"}


id: GO:0047895
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 formaldehyde + H2O = methanol + formate.","definition_xrefs":["EC:1.2.98.1","MetaCyc:FORMALDEHYDE-DISMUTASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"formaldehyde dismutase activity","secondary_identifiers":["MetaCyc:RXN-11453","RHEA:19221"],"synonyms":[{"name":"aldehyde dismutase activity","type":"related"},{"name":"cannizzanase activity","type":"related"},{"name":"formaldehyde:formaldehyde oxidoreductase activity","type":"related"},{"name":"nicotinoprotein aldehyde dismutase","type":"related"}],"termid":"GO:0047895"}


id: PBO:0002498
data:
  {"annotation_feature_type":"gene","cv_name":"DNA_binding_specificity","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binds d(GT)n","termid":"PBO:0002498"}


id: PBO:0005340
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.1.2.3","termid":"PBO:0005340"}


id: GO:0031201
data:
  {"annotated_genes":["SJAG_03347","SJAG_02586","SJAG_04023","SJAG_00826","SJAG_03552","SJAG_04513","SJAG_00557","SJAG_00171","SJAG_04739","SJAG_02241","SJAG_03536","SJAG_04909","SJAG_02204","SJAG_01324","SJAG_04978","SJAG_04701","SJAG_03848"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86624,89693,94158,95567,95959,96275,96808,97138,103437,104079,104736,105705,105853,108743,113619,114598,114690],"is_not":false,"summary":null,"term":"GO:0031201"}]},"cv_name":"cellular_component","definition":"A protein complex involved in membrane fusion; a stable ternary complex consisting of a four-helix bundle, usually formed from one R-SNARE and three Q-SNAREs with an ionic layer sandwiched between hydrophobic layers. One well-characterized example is the neuronal SNARE complex formed of synaptobrevin 2, syntaxin 1a, and SNAP-25.","definition_xrefs":["PMID:19450911","GOC:pr","PMID:10872468","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00171":null,"SJAG_00557":null,"SJAG_00826":null,"SJAG_01324":null,"SJAG_02204":null,"SJAG_02241":null,"SJAG_02586":null,"SJAG_03347":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03848":null,"SJAG_04023":null,"SJAG_04513":null,"SJAG_04701":null,"SJAG_04739":null,"SJAG_04909":null,"SJAG_04978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"SNARE complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031201","terms_by_termid":{"GO:0031201":null}}


id: GO:0000083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that regulates transcription such that the target genes are involved in the transition between G1 and S phase of the mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in G1/S transition of mitotic cell cycle (obsolete GO:0000083)","termid":"GO:0000083"}


id: GO:0015537
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: xanthosine(out) + H+(out) = xanthosine(in) + H+(in).","definition_xrefs":["TC:2.A.1.10.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside:proton symporter activity","termid":"GO:0015506"},{"relation_name":"is_a","term_name":"xanthosine transmembrane transporter activity","termid":"GO:0015553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"xanthosine:proton symporter activity","synonyms":[{"name":"xanthosine permease activity","type":"related"},{"name":"xanthosine:hydrogen ion symporter activity","type":"exact"}],"termid":"GO:0015537"}


id: PBO:0112741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 2 (gene/pseudogene)","termid":"PBO:0112741"}


id: GO:0008281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with sulfonylurea, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"sulfonylurea receptor activity","synonyms":[{"name":"sulphonylurea receptor activity","type":"exact"}],"termid":"GO:0008281"}


id: PBO:0079067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Trp (anticodon CCA) 3-1","termid":"PBO:0079067"}


id: SO:0002277
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Crypton is a superfamily of DNA transposons that use tyrosine recombinase (YR) to cut and rejoin the recombining DNA molecules.","definition_xrefs":["PMID:22011512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_transposon","termid":"SO:0000182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Crypton_YR_transposon","synonyms":[{"name":"Crypton YR transposon","type":"exact"},{"name":"Crypton transposon","type":"exact"},{"name":"DYC transposon","type":"exact"}],"termid":"SO:0002277"}


id: GO:0061481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a TNF agonist stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to TNF agonist","termid":"GO:0061481"}


id: MOD:02046
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-glutamine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamine residue","termid":"MOD:00907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-glutamine residue","synonyms":[{"name":"XlnkGln","type":"exact"}],"termid":"MOD:02046"}


id: GO:0010051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that gives rise to the patterning of the conducting tissues. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:tb","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"xylem and phloem pattern formation","synonyms":[{"name":"vascular tissue pattern formation","type":"exact"}],"termid":"GO:0010051"}


id: PBO:0070518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 17","termid":"PBO:0070518"}


id: PBO:0030466
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_pantothenate_import","termid":"PBO:0030466"}


id: PBO:0087800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tail-anchored ER membrane protein of unknown function; interacts with homolog Frt1p; promotes growth in conditions of high Na+, alkaline pH, or cell wall stress, possibly via a role in posttranslational translocation; potential Cdc28p substrate; FRT2 has a paralog, FRT1, that arose from the whole genome duplication","termid":"PBO:0087800"}


id: PBO:0059698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 6","termid":"PBO:0059698"}


id: PBO:0068779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 16, pseudogene","termid":"PBO:0068779"}


id: GO:0005065
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete heterotrimeric G-protein (obsolete GO:0005065)","synonyms":[{"name":"heterotrimeric G-protein","type":"exact"}],"termid":"GO:0005065"}


id: PBO:0091303
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing of all introns, including intron IV, introduces stop codon that leads to production of mitochondrial hydrolase instead of tandem hydrolase/cardiolipin fusion protein","termid":"PBO:0091303"}


id: PBO:0089422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim44","termid":"PBO:0089422"}


id: PBO:0073471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoglycan alpha","termid":"PBO:0073471"}


id: PBO:0071525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 28","termid":"PBO:0071525"}


id: PBO:0076490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TARDBP pseudogene 5","termid":"PBO:0076490"}


id: PBO:0078363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 8-1","termid":"PBO:0078363"}


id: PBO:0017580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Rcf2","termid":"PBO:0017580"}


id: _global:causally_upstream_of_or_within,_positive_effect
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of_or_within","termid":"_global:causally_upstream_of_or_within"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of_or_within,_positive_effect","secondary_identifiers":["RO:0004047"],"termid":"_global:causally_upstream_of_or_within,_positive_effect"}


id: GO:0035048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a pre-mRNA splicing factor from the cytoplasm into the nucleus, across the nuclear membrane.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete splicing factor protein import into nucleus (obsolete GO:0035048)","synonyms":[{"name":"splicing factor protein transport from cytoplasm to nucleus","type":"exact"},{"name":"splicing factor protein-nucleus import","type":"exact"}],"termid":"GO:0035048"}


id: GO:0033845
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxymethylfurfural + NADPH + H+ = 2,5-bis-hydroxymethylfuran + NADP+.","definition_xrefs":["PMID:15338422","GOC:mah","PMID:16652391","GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"hydroxymethylfurfural reductase (NADPH) activity","termid":"GO:0033845"}


id: PBO:0075882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3GAL6 antisense RNA 1","termid":"PBO:0075882"}


id: GO:0008503
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with benzodiazepines, a class of drugs with hypnotic, anxiolytic, anticonvulsive, amnestic and myorelaxant properties, to initiate a change in cell activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter receptor activity","termid":"GO:0030594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"benzodiazepine receptor activity","termid":"GO:0008503"}


id: GO:0035610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a glutamate residue from the side chain of a protein. Glutamate side chains are added to glutamic acid residues within the primary protein sequence during polyglutamylation.","definition_xrefs":["GOC:sp","PMID:21074048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deglutamylation","termid":"GO:0035608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein side chain deglutamylation","synonyms":[{"name":"removal of posttranslational polyglutamylation","type":"exact"},{"name":"shortening of glutamate side chain","type":"related"}],"termid":"GO:0035610"}


id: GO:0051758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of homologous chromosomes from the center of the spindle towards the spindle poles, mediated by the shortening of microtubules attached to the chromosomes, during meiosis I anaphase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome movement towards spindle pole","termid":"GO:0016344"},{"relation_name":"part_of","term_name":"homologous chromosome segregation","termid":"GO:0045143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0051179","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"homologous chromosome movement towards spindle pole in meiosis I anaphase","synonyms":[{"name":"homologous chromosome movement towards spindle pole during meiosis I","type":"related"},{"name":"meiosis I, homologous chromosome movement towards spindle pole","type":"exact"}],"termid":"GO:0051758"}


id: PR:O74441
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ctl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline transporter-like protein ctl1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.11c","synonyms":[{"name":"Spom972h-ctl1","type":"exact"}],"termid":"PR:O74441"}


id: PBO:0113245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein that binds the rDNA replication fork barrier site; required for replication fork blocking and recombinational hotspot activity that results in concerted evolution of the rDNA, termed homogenization; role in recruitment of condensin to the replication fork barrier (RFB), contributing to the faithful segregation of rDNA repeats; proposed role in recovery from low rDNA copy number; related to retroviral integrases","termid":"PBO:0113245"}


id: PBO:0052369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 17","termid":"PBO:0052369"}


id: PBO:0053989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1307","termid":"PBO:0053989"}


id: PBO:0056094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ly6/neurotoxin 1","termid":"PBO:0056094"}


id: PR:Q9Y7Q1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lto1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Q1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ORAOV1 family protein C191.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.08","synonyms":[{"name":"Spom972h-lto1","type":"exact"}],"termid":"PR:Q9Y7Q1"}


id: PBO:0027940
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_viability_upon_glucose_starvation","termid":"PBO:0027940"}


id: PBO:0014287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan, predicted GPI anchored","termid":"PBO:0014287"}


id: PBO:0075346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOS1 intronic transcript 1","termid":"PBO:0075346"}


id: PBO:0049681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HuR (ELAVL1) associated fibroblast migratory lncRNA","termid":"PBO:0049681"}


id: PBO:0068696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 77, pseudogene","termid":"PBO:0068696"}


id: GO:0090362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the appearance of any platelet-derived growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of platelet-derived growth factor production","termid":"GO:0090361"},{"relation_name":"positively_regulates","term_name":"platelet-derived growth factor production","termid":"GO:0090360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of platelet-derived growth factor production","termid":"GO:0090362"}


id: GO:0002141
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A stereocilia coupling link that is composed of a fine filament present in developing stereocilia that couples the bases of individual stereocilia to one another. They are not present in mature stereocilia.","definition_xrefs":["PMID:17567809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereocilia coupling link","termid":"GO:0002139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilia ankle link","termid":"GO:0002141"}


id: PR:Q9C0Y8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB24D3.06c gene.","definition_xrefs":["UniProtKB:Q9C0Y8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0613 protein PB24D3.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB24D3.06c","synonyms":[{"name":"Spom972h-SPAPB24D3.06c","type":"exact"}],"termid":"PR:Q9C0Y8"}


id: GO:0018580
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ethylnitronate + O2 = acetaldehyde + nitrite.","definition_xrefs":["EC:1.13.12.16","RHEA:28767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"nitronate monooxygenase activity","secondary_identifiers":["MetaCyc:2-NITROPROPANE-DIOXYGENASE-RXN"],"synonyms":[{"name":"2-nitropropane dioxygenase activity","type":"related"},{"name":"nitronate:oxygen 2-oxidoreductase (nitrite-forming) activity","type":"exact"}],"termid":"GO:0018580"}


id: PBO:0081680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 601, pseudogene","termid":"PBO:0081680"}


id: PBO:0072813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 9","termid":"PBO:0072813"}


id: GO:0046565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-dehydroshikimate = 3,4-dihydroxybenzoate + H2O. 3,4-dihydroxybenzoate is also known as protocatechuate.","definition_xrefs":["EC:4.2.1.118","MetaCyc:DHSHIKIMATE-DEHYDRO-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"3-dehydroshikimate dehydratase activity","secondary_identifiers":["RHEA:24848"],"termid":"GO:0046565"}


id: PBO:0009930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peloto ortholog (predicted)","termid":"PBO:0009930"}


id: PBO:0078330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon CTC) 1-2","termid":"PBO:0078330"}


id: PBO:0046760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome component 2","termid":"PBO:0046760"}


id: GO:0033796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reduction of elemental sulfur or polysulfide to hydrogen sulfide, H2 + n sulfur = H+ + hydrogen sulfide + (n-1) sulfur.","definition_xrefs":["RHEA:35591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sulfur reductase activity","secondary_identifiers":["MetaCyc:RXN-8269","EC:1.12.98.4"],"synonyms":[{"name":"(donor):sulfur oxidoreductase activity","type":"related"},{"name":"sulphur reductase activity","type":"exact"}],"termid":"GO:0033796"}


id: GO:2000105
data:
  {"annotated_genes":["SJAG_02074","SJAG_03160","SJAG_03720","SJAG_03048","SJAG_00364","SJAG_03438","SJAG_03695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99386,108098,113352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"},{"annotations":[98438,112311,102664,85123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904514"},{"annotations":[98442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903465"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA-templated DNA replication.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA replication","termid":"GO:0045740"},{"relation_name":"is_a","term_name":"regulation of DNA-templated DNA replication","termid":"GO:0090329"},{"relation_name":"positively_regulates","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_02074":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03438":null,"SJAG_03695":null,"SJAG_03720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"positive regulation of DNA-templated DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of DNA-dependent DNA replication","type":"exact"}],"termid":"GO:2000105","terms_by_termid":{"GO:1903465":null,"GO:1903468":null,"GO:1904514":null}}


id: MOD:01406
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-threonine residue to form L-threonine thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:11320328","RESID:AA0483"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-threonine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S,2R)-1-amino-2-hydroxypropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-hydroxypropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Thr-Cys)","type":"exact"},{"name":"L-threonine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01406"}


id: PBO:0047166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 193 member B","termid":"PBO:0047166"}


id: GO:0070651
data:
  {"annotated_genes":["SJAG_04321","SJAG_03728","SJAG_04084","SJAG_03507","SJAG_04818","SJAG_03179","SJAG_03745","SJAG_01191","SJAG_01818","SJAG_04283","SJAG_04824","SJAG_04006","SJAG_00854","SJAG_04153","SJAG_01521"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88289,89120,91974,93311,93556,98137,100457,101304,102509,103507,103598,111513,111953,112101,114364],"is_not":false,"summary":null,"term":"GO:0070651"}]},"cv_name":"biological_process","definition":"An rRNA catabolic process that results in the targeted detection and degradation of aberrant rRNAs contained within translationally defective ribosomes, thereby acting as a quality-control system.","definition_xrefs":["GOC:mah","GOC:rn","PMID:17188037","PMID:19390089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA catabolic process","termid":"GO:0016075"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_03179":null,"SJAG_03507":null,"SJAG_03728":null,"SJAG_03745":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04283":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nonfunctional rRNA decay","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NRD","type":"related"}],"termid":"GO:0070651","terms_by_termid":{"GO:0070651":null}}


id: FYPO:0005805
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of movement of one or more proteins within the plasma membrane of the cell tip is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:25837586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein movement within plasma membrane during vegetative growth","termid":"FYPO:0005804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal rate of protein movement within plasma membrane at cell tip","synonyms":[{"name":"normal rate of protein movement within plasma membrane at cell end","type":"exact"},{"name":"normal rate of protein movement within plasma membrane at cell tip during mitotic cell cycle","type":"related"},{"name":"normal rate of protein movement within plasma membrane at cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0005805"}


id: PATO:0000234
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000234 visual (obsolete PATO:0000234)","termid":"PATO:0000234"}


id: GO:0004680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete casein kinase activity (obsolete GO:0004680)","synonyms":[{"name":"casein kinase activity","type":"exact"}],"termid":"GO:0004680"}


id: PBO:0036220
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_protein_movement_within_plasma_membrane_at_cell_tip","termid":"PBO:0036220"}


id: PBO:0053449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 397","termid":"PBO:0053449"}


id: PBO:0054209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1589","termid":"PBO:0054209"}


id: PBO:0070784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 14","termid":"PBO:0070784"}


id: PBO:0063006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet activating factor acetylhydrolase 1b catalytic subunit 2","termid":"PBO:0063006"}


id: PBO:0070160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 74 pseudogene","termid":"PBO:0070160"}


id: PBO:0001581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle checkpoint protein Bub3","termid":"PBO:0001581"}


id: PBO:0054925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2339","termid":"PBO:0054925"}


id: FYPO:0001424
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"},{"relation_name":"is_a","term_name":"abolished protein localization to nucleus","termid":"FYPO:0003450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to nucleus during vegetative growth","synonyms":[{"name":"abolished protein localisation to nucleus during vegetative growth","type":"exact"},{"name":"abolished protein localization to nucleus during mitotic cell cycle","type":"related"},{"name":"nuclear exclusion during vegetative growth","type":"related"},{"name":"nuclear protein exclusion during vegetative growth","type":"related"},{"name":"protein localization to nucleus abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001424"}


id: FYPO:0005923
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of the histone variant H2A.Z found associated with chromatin in subtelomeric regions is higher than normal when the cell is in the vegetative growth phase of the life cycle.","definition_xrefs":["PMID:21437270","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level in chromatin","termid":"FYPO:0005893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased H2A.Z level at subtelomere","synonyms":[{"name":"H2A.Z accumulation at subtelomere","type":"exact"},{"name":"increased H2A.Z level at subtelomere during mitotic cell cycle","type":"related"},{"name":"increased H2A.Z level at subtelomere during vegetative growth","type":"exact"},{"name":"increased H2A.Z level in chromatin at subtelomere","type":"exact"}],"termid":"FYPO:0005923"}


id: PBO:0077470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 191A (pseudogene)","termid":"PBO:0077470"}


id: GO:0015200
data:
  {"annotated_genes":["SJAG_04731"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95314],"is_not":false,"summary":null,"term":"GO:0015200"}]},"cv_name":"molecular_function","definition":"Enables directed movement of methylammonium, CH3NH2, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine transmembrane transporter activity","termid":"GO:0005275"},{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04731":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"methylammonium transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015200","terms_by_termid":{"GO:0015200":null}}


id: PR:P78926
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- map1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheromone receptor transcription activator (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.06","synonyms":[{"name":"Spom972h-map1","type":"exact"},{"name":"protein map1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78926"}


id: FYPO:0004486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the deacetylation of one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abnormal protein deacetylation during vegetative growth","termid":"FYPO:0004485"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0002494","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein deacetylation during vegetative growth","synonyms":[{"name":"abolished protein deacetylation during mitotic cell cycle","type":"related"},{"name":"protein deacetylation abolished during vegetative growth","type":"exact"},{"name":"protein deacetylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0004486"}


id: GO:0015308
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + amiloride(in) = H+(in) + amiloride(out).","definition_xrefs":["TC:2.A.1.2.1"],"gene_count":0,"genotype_count":0,"name":"obsolete amiloride:proton antiporter activity (obsolete GO:0015308)","synonyms":[{"name":"amiloride:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015308"}


id: GO:0010020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of a chloroplast within a cell to form two or more separate chloroplast compartments. This division occurs independently of mitosis.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloroplast organization","termid":"GO:0009658"},{"relation_name":"is_a","term_name":"plastid fission","termid":"GO:0043572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chloroplast fission","synonyms":[{"name":"chloroplast division","type":"exact"}],"termid":"GO:0010020"}


id: PBO:0077014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THBS2 antisense RNA 1","termid":"PBO:0077014"}


id: PR:000050511
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiotic recombination protein rec8 (Schizosaccharomyces pombe) that has been phosphorylated at the position equivalent to Ser-450 of the amino acid sequence represented by UniProtKB:P36626. Example: UniProtKB:P36626, Ser-450, MOD:00046.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:33888556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic recombination protein rec8 (Schizosaccharomyces pombe)","termid":"PR:000050510"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rec8/Phos(S450)","pombase_gene_id":"SPBC29A10.14","synonyms":[{"name":"PomBase_original_PRO_term_name: meiotic recombination protein rec8 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rec8/Phos:1","type":"exact"},{"name":"UniProtKB:P36626, Ser-450, MOD:00046","type":"narrow"},{"name":"rec8/Phos(S450)","type":"exact"}],"termid":"PR:000050511"}


id: PBO:0057966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3688-1","termid":"PBO:0057966"}


id: PBO:0049942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyisobutyryl-CoA hydrolase","termid":"PBO:0049942"}


id: PBO:0088024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP protein involved in splicing; required for U1 snRNP biogenesis; contains multiple tetriatricopeptide repeats","termid":"PBO:0088024"}


id: PR:O13739
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- aro7 gene.","definition_xrefs":["UniProtKB:O13739","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorismate mutase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.04c","synonyms":[{"name":"CM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-aro7","type":"exact"}],"termid":"PR:O13739"}


id: PBO:0111937
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of Heat Sensitivity","termid":"PBO:0111937"}


id: SO:0000586
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a tmRNA (SO:0000584).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tmRNA_primary_transcript","synonyms":[{"name":"10Sa RNA primary transcript","type":"related"},{"name":"ssrA RNA primary transcript","type":"related"},{"name":"tmRNA primary transcript","type":"exact"}],"termid":"SO:0000586"}


id: GO:0050847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by a progesterone binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:14744870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor-mediated steroid hormone signaling pathway","termid":"GO:0030518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"progesterone receptor signaling pathway","synonyms":[{"name":"intracellular progesterone receptor signaling pathway","type":"exact"},{"name":"nuclear receptor-mediated progesterone signaling pathway","type":"exact"},{"name":"progesterone receptor signalling pathway","type":"exact"}],"termid":"GO:0050847"}


id: GO:0032451
data:
  {"annotated_genes":["SJAG_03997","SJAG_03635","SJAG_03750","SJAG_03664","SJAG_03286","SJAG_03041","SJAG_01465","SJAG_02401","SJAG_00892"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83466,108294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051864"},{"annotations":[113828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140680"},{"annotations":[83467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032453"},{"annotations":[92718,109129,83468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034647"},{"annotations":[113829,108295],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032454"},{"annotations":[90144,99294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140683"},{"annotations":[84544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008398"},{"annotations":[99163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990984"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a substrate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity","termid":"GO:0003824"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00892":null,"SJAG_01465":null,"SJAG_02401":null,"SJAG_03041":null,"SJAG_03286":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03750":null,"SJAG_03997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674"],"is_obsolete":false,"name":"demethylase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032451","terms_by_termid":{"GO:0008398":null,"GO:0032453":null,"GO:0032454":null,"GO:0034647":null,"GO:0051864":null,"GO:0140680":null,"GO:0140683":null,"GO:1990984":null}}


id: GO:0044866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a host organism effects a change in viral exo-alpha-sialidase activity, the catalysis of the hydrolysis of peptide bonds in a protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of viral catalytic activity","termid":"GO:0044867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation by host of viral exo-alpha-sialidase activity","termid":"GO:0044866"}


id: GO:0045237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CXCR1 chemokine receptor.","definition_xrefs":["GOC:ceb","PMID:11910892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-8 receptor binding","termid":"GO:0005153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"CXCR1 chemokine receptor binding","synonyms":[{"name":"CXCR1 chemokine receptor ligand","type":"narrow"}],"termid":"GO:0045237"}


id: PBO:0069672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 949, pseudogene","termid":"PBO:0069672"}


id: PBO:0081553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 473","termid":"PBO:0081553"}


id: PBO:0062945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferation-associated 2G4 pseudogene 3","termid":"PBO:0062945"}


id: GO:0085019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a symbiont-induced complex organelle that comprises of multiple protein and lipid domains for the purpose of obtaining nutrients from its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of specialized structure for nutrient acquisition","termid":"GO:0052093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of tubovesicular network for nutrient acquisition","synonyms":[{"name":"formation by symbiont of a tubovesicular network for nutrient acquisition from host","type":"related"},{"name":"formation of a symbiont- induced tubovesicular network for nutrient acquisition from host","type":"exact"}],"termid":"GO:0085019"}


id: GO:0016519
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with gastric inhibitory peptide (GIP) and transmitting the signal across the membrane to activate an associated G-protein.","definition_xrefs":["GOC:mah","PMID:8243312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"gastric inhibitory peptide receptor activity","synonyms":[{"name":"GIP receptor activity","type":"exact"},{"name":"glucose-dependent insulinotropic polypeptide receptor activity","type":"exact"}],"termid":"GO:0016519"}


id: CHEBI:53090
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-dicyclohexylcarbodiimide","termid":"CHEBI:53090"}


id: GO:1900895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tridecane metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"regulation of tridecane metabolic process","termid":"GO:1900893"},{"relation_name":"positively_regulates","term_name":"tridecane metabolic process","termid":"GO:1900631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tridecane metabolic process","synonyms":[{"name":"activation of tridecane metabolic process","type":"narrow"},{"name":"activation of tridecane metabolism","type":"narrow"},{"name":"positive regulation of tridecane metabolism","type":"related"},{"name":"up regulation of tridecane metabolic process","type":"exact"},{"name":"up regulation of tridecane metabolism","type":"related"},{"name":"up-regulation of tridecane metabolic process","type":"exact"},{"name":"up-regulation of tridecane metabolism","type":"related"},{"name":"upregulation of tridecane metabolic process","type":"exact"},{"name":"upregulation of tridecane metabolism","type":"related"}],"termid":"GO:1900895"}


id: PBO:0090757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide synthetase Dph6","termid":"PBO:0090757"}


id: PBO:0051633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner mitochondrial membrane peptidase subunit 1 pseudogene 3","termid":"PBO:0051633"}


id: FYPO:0007192
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which rapid, back-and-forth movement of the mitotic spindle pole body (SPB), and associated chromosome movement, do not occur. Normally, SPB oscillation occurs during mitotic interphase (as well as prophase) but is restricted to a small space.","definition_xrefs":["PMID:31483748","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle pole body-led chromosome movement during mitotic interphase","termid":"FYPO:0005348"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished spindle pole body-led chromosome movement during mitotic interphase","synonyms":[{"name":"abolished mitotic SPB oscillation during mitotic interphase","type":"exact"},{"name":"abolished mitotic spindle pole body movement during mitotic interphase","type":"exact"},{"name":"abolished mitotic spindle pole body oscillation during mitotic interphase","type":"exact"},{"name":"abolished spindle pole body-led chromosome movement during interphase of mitotic cell cycle","type":"related"},{"name":"abolished spindle pole body-led chromosome movement during mitotic interphase during vegetative growth","type":"exact"},{"name":"mitotic spindle pole body oscillation abolished during mitotic interphase","type":"exact"}],"termid":"FYPO:0007192"}


id: PBO:0041056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRD7 pseudogene 7","termid":"PBO:0041056"}


id: FYPO:0004786
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the Golgi apparatus is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to Golgi apparatus","termid":"FYPO:0003936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to Golgi apparatus","synonyms":[{"name":"decreased protein localisation to Golgi apparatus","type":"exact"},{"name":"decreased protein localization to Golgi apparatus during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to Golgi apparatus during vegetative growth","type":"exact"},{"name":"reduced protein localization to Golgi apparatus","type":"exact"}],"termid":"FYPO:0004786"}


id: PBO:0030587
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_valine_level","termid":"PBO:0030587"}


id: GO:0043745
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N2-acetyl-L-aminoadipyl-delta-phosphate + NADPH + H+ = N2-acetyl-L-aminoadipate semialdehyde + NADP+ + orthophosphate.","definition_xrefs":["IMG:01449"],"gene_count":0,"genotype_count":0,"name":"obsolete N2-acetyl-L-aminoadipate semialdehyde dehydrogenase activity (obsolete GO:0043745)","termid":"GO:0043745"}


id: PBO:0048875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family member A","termid":"PBO:0048875"}


id: GO:0009193
data:
  {"annotated_genes":["SJAG_00779","SJAG_03676","SJAG_04665","SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[88483,103313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046704"},{"annotations":[111648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[110027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pyrimidine ribonucleoside diphosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside diphosphate metabolic process","termid":"GO:0009138"},{"relation_name":"is_a","term_name":"ribonucleoside diphosphate metabolic process","termid":"GO:0009185"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00779":null,"SJAG_00885":null,"SJAG_03676":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pyrimidine ribonucleoside diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine ribonucleoside diphosphate metabolism","type":"exact"}],"termid":"GO:0009193","terms_by_termid":{"GO:0006225":null,"GO:0006256":null,"GO:0046704":null,"GO:0046705":null}}


id: SO:0001497
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The X element is a conserved region, of the telomere, of ~475 bp that contains an ARS sequence and in most cases an Abf1p binding site.","definition_xrefs":["PMID:8005434","PMID:7785338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"},{"relation_name":"part_of","term_name":"telomere","termid":"SO:0000624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X_element","synonyms":[{"name":"X element","type":"related"},{"name":"X element core sequence","type":"exact"}],"termid":"SO:0001497"}


id: GO:1990957
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is located at the ciliary transition zone and consists of the NPHP4 and NPHP1 proteins. It acts as an organiser of the transition zone inner structure, specifically the Y-shaped links, in conjunction with the MKS complex. It is involved in ciliary protein trafficking and is required for correct functioning of the WNT and Hippo signaling pathways.","definition_xrefs":["PMID:21422230","PMID:18337471","PMID:21498478","PMID:21555462","PMID:25150219","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"ciliary transition zone","termid":"GO:0035869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"NPHP complex","synonyms":[{"name":"NPHP module","type":"exact"}],"termid":"GO:1990957"}


id: GO:0140301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The interactions (or cell to cell communication) that occur between the pollen grain (male gametophyte) and the stigmatic tissues of the female sporophyte after the pollen reaches the stigmatic papillae.","definition_xrefs":["PMID:27899537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pollen-pistil interaction","termid":"GO:0009875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen-stigma interaction","termid":"GO:0140301"}


id: GO:0018567
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: styrene + O2 + NADH + H+ = NAD+ + styrene cis-glycol.","definition_xrefs":["UM-BBD_reactionID:r0256"],"gene_count":0,"genotype_count":0,"name":"obsolete styrene dioxygenase activity (obsolete GO:0018567)","termid":"GO:0018567"}


id: GO:0052024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase by an organism of the levels of hormones or growth regulators in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of hormone or growth regulator levels in host (obsolete GO:0052024)","synonyms":[{"name":"activation by symbiont of hormone or growth regulator levels in host","type":"narrow"},{"name":"positive modulation of hormone or growth regulator levels in host","type":"exact"},{"name":"positive regulation by organism of hormone or growth regulator levels in other organism involved in symbiotic interaction","type":"broad"},{"name":"stimulation by symbiont of hormone or growth regulator levels in host","type":"narrow"},{"name":"up regulation by symbiont of hormone or growth regulator levels in host","type":"exact"},{"name":"up-regulation by symbiont of hormone or growth regulator levels in host","type":"exact"},{"name":"upregulation by symbiont of hormone or growth regulator levels in host","type":"exact"}],"termid":"GO:0052024"}


id: MOD:00153
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to 3'-(8alpha-FAD)-L-histidine.","definition_xrefs":["Unimod:50#H","PubMed:8076","PubMed:241294","RESID:AA0144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD modified residue","termid":"MOD:00895"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-(8alpha-FAD)-L-histidine","synonyms":[{"name":"(2S)-2-amino-3-(3-[8alpha-riboflavin 5'-(trihydrogen diphosphate) 5'->5'-ester with adenosine]imidazol-4-yl)propanoic acid","type":"exact"},{"name":"3'-(8alpha-FAD)-L-histidine","type":"exact"},{"name":"8alpha-(N(delta)-histidyl)FAD","type":"exact"},{"name":"8alpha-(N3'-histidyl)FAD","type":"exact"},{"name":"8alpha-N1-histidyl FAD","type":"related"},{"name":"FAD","type":"related"},{"name":"Flavin adenine dinucleotide","type":"related"},{"name":"MOD_RES Pros-8alpha-FAD histidine","type":"exact"},{"name":"N(pi)-(8alpha-FAD)-histidine","type":"exact"},{"name":"Np8aFADHis","type":"exact"},{"name":"pros-(8alpha-FAD)-histidine","type":"exact"}],"termid":"MOD:00153"}


id: SO:0000417
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A structurally or functionally defined protein region. In proteins with multiple domains, the combination of the domains determines the function of the protein. A region which has been shown to recur throughout evolution.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_structural_region","termid":"SO:0001070"},{"relation_name":"is_a","term_name":"polypeptide_conserved_region","termid":"SO:0100021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_domain","secondary_identifiers":["BS:00134","BS:00012","SO:0001069"],"synonyms":[{"name":"domain","type":"broad"},{"name":"polypeptide domain","type":"exact"},{"name":"polypeptide_structural_domain","type":"exact"},{"name":"structural domain","type":"broad"}],"termid":"SO:0000417"}


id: PBO:0028173
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_double-strand_break_repair_via_nonhomologous_end_joining","termid":"PBO:0028173"}


id: PR:O94692
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A RuvB-like 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02903","PANTHER:PTHR11093:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RuvB-like helicase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.08","secondary_identifiers":["UniProtKB:O94692"],"synonyms":[{"name":"Spom972h-RUVBL2","type":"exact"}],"termid":"PR:O94692"}


id: PBO:0045644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 2","termid":"PBO:0045644"}


id: GO:0090338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of formin-nucleated actin cable assembly. Formin-nucleated actin cable assembly is the aggregation, arrangement and bonding together of a set of components to form a formin-nucleated actin cable. A formin-nucleated actin cable is an actin filament bundle that consists of short filaments organized into bundles of uniform polarity, and is nucleated by formins.","definition_xrefs":["GOC:tb","GOC:jh","PMID:12810699","PMID:15923184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of actin filament bundle assembly","termid":"GO:0032233"},{"relation_name":"is_a","term_name":"regulation of formin-nucleated actin cable assembly","termid":"GO:0090337"},{"relation_name":"positively_regulates","term_name":"formin-nucleated actin cable assembly","termid":"GO:0070649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0030036","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"positive regulation of formin-nucleated actin cable assembly","termid":"GO:0090338"}


id: PATO:0000160
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000160 relative incidence (obsolete PATO:0000160)","termid":"PATO:0000160"}


id: PBO:0001668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA 5'-triphosphatase","termid":"PBO:0001668"}


id: PBO:0046101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4B pseudogene 4","termid":"PBO:0046101"}


id: GO:0033530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving raffinose, the trisaccharide beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranoside.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"raffinose metabolic process","synonyms":[{"name":"raffinose metabolism","type":"exact"}],"termid":"GO:0033530"}


id: GO:0048733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sebaceous gland over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"},{"relation_name":"part_of","term_name":"skin development","termid":"GO:0043588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sebaceous gland development","termid":"GO:0048733"}


id: GO:0001653
data:
  {"annotated_genes":["SJAG_01345","SJAG_01978"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004932"},{"annotations":[84211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036320"}]},"cv_name":"molecular_function","definition":"Combining with an extracellular or intracellular peptide to initiate a change in cell activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01345":null,"SJAG_01978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"peptide receptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"endogenous peptide receptor activity","type":"narrow"},{"name":"exogenous peptide receptor activity","type":"narrow"}],"termid":"GO:0001653","terms_by_termid":{"GO:0004932":null,"GO:0036320":null}}


id: GO:0106099
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction 2-dehydro-3-deoxy-L-rhamnonate = pyruvate + (S)-lactaldehyde.","definition_xrefs":["PMID:18754683","EC:4.1.2.53","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-keto-3-deoxy-L-rhamnonate aldolase activity","secondary_identifiers":["RHEA:25784"],"termid":"GO:0106099"}


id: GO:0098827
data:
  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distinct region of the endoplasmic reticulum.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle subcompartment","termid":"GO:0031984"},{"relation_name":"part_of","term_name":"endoplasmic 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reticulum subcompartment","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21802294":null,"PMID:33495454":null},"termid":"GO:0098827","terms_by_termid":{"GO:0000506":null,"GO:0000836":null,"GO:0005784":null,"GO:0005785":null,"GO:0005787":null,"GO:0005789":null,"GO:0008250":null,"GO:0031207":null,"GO:0032541":null,"GO:0034098":null,"GO:0042765":null,"GO:0043541":null,"GO:0071261":null,"GO:0071782":null,"GO:0072546":null,"GO:0098553":null,"GO:0098554":null,"GO:0098826":null,"GO:0099021":null,"GO:0160005":null,"GO:1990578":null,"GO:1990604":null}}


id: GO:0021542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dentate gyrus over time, from its formation to the mature structure. The dentate gyrus is one of two interlocking gyri of the hippocampus. It contains granule cells, which project to the pyramidal cells and interneurons of the CA3 region of the ammon gyrus.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GOC:jid","ISBN:0838580343","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"hippocampus development","termid":"GO:0021766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dentate gyrus development","termid":"GO:0021542"}


id: PBO:0113345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for 25S rRNA maturation and 60S ribosomal subunit assembly; localizes to the nucleolus and in foci along nuclear periphery; constituent of 66S pre-ribosomal particles; cooperates with Rrs1p and Mps3p to mediate telomere clustering by binding Sir4p, but is not involved in telomere tethering","termid":"PBO:0113345"}


id: GO:0033998
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [(2->1)-beta-D-fructosyl](n) = [(2->1)-beta-D-fructosyl](n-1) + alpha-D-fructofuranose beta-D-fructofuranose 1,2':2,3'-dianhydride. This reaction is the production of alpha-D-fructofuranose beta-D-fructofuranose 1,2':2,3'-dianhydride (DFA III) by successively eliminating the diminishing (2->1)-beta-D-fructan (inulin) chain from the terminal D-fructosyl-D-fructosyl disaccharide.","definition_xrefs":["EC:4.2.2.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"inulin fructotransferase (DFA-III-forming) activity","secondary_identifiers":["MetaCyc:4.2.2.18-RXN"],"synonyms":[{"name":"2,1-beta-D-fructan lyase (alpha-D-fructofuranose-beta-D-fructofuranose-1,2':2,3'-dianhydride-forming) activity","type":"related"},{"name":"inulase II activity","type":"related"},{"name":"inulin D-fructosyl-D-fructosyltransferase (1,2':2,3'-dianhydride-forming) activity","type":"related"},{"name":"inulin D-fructosyl-D-fructosyltransferase (forming alpha-D-fructofuranose beta-D-fructofuranose 1,2':2,3'-dianhydride) activity","type":"related"},{"name":"inulin fructotransferase (DFA-III-producing) activity","type":"related"},{"name":"inulin fructotransferase (depolymerizing) activity","type":"related"},{"name":"inulin fructotransferase (depolymerizing, difructofuranose-1,2':2,3'-dianhydride-forming) activity","type":"related"},{"name":"inulinase II activity","type":"related"}],"termid":"GO:0033998"}


id: GO:0047233
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetylneuraminyl-2,3-alpha-D-galactosyl-1,4-beta-D-glucosylceramide + UDP-N-acetylgalactosamine = N-acetyl-beta-D-galactosaminyl-1,4-(N-acetyl-alpha-neuraminyl-2,3)-beta-D-galactosyl-1,4-beta-D-glucosylceramide + UDP.","definition_xrefs":["MetaCyc:2.4.1.165-RXN","EC:2.4.1.165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"N-acetylneuraminylgalactosylglucosylceramide beta-1,4-N-acetylgalactosaminyltransferase activity","secondary_identifiers":["RHEA:13569"],"synonyms":[{"name":"UDP-N-acetyl-D-galactosamine:N-acetylneuraminyl-2,3-alpha-D-galactosyl-1,4-beta-D-glucosylceramide beta-1,4-N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylgalactosamine-acetylneuraminyl(alpha2->3)galactosyl(beta1->4)glucosyl beta1->4-acetylgalactosaminyltransferase activity","type":"related"}],"termid":"GO:0047233"}


id: PBO:0040282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase Na+/K+ transporting subunit alpha 2","termid":"PBO:0040282"}


id: PR:P40847
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sap1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"switch-activating protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1672.02c","synonyms":[{"name":"Spom972h-sap1","type":"exact"}],"termid":"PR:P40847"}


id: PBO:0003195
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.4.5","termid":"PBO:0003195"}


id: PBO:0090350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase AMPK (beta) regulatory subunit Amk2","termid":"PBO:0090350"}


id: SO:0001656
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the molecule, interacts selectively and non-covalently with metal ions.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding_site","termid":"SO:0000409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal_binding_site","synonyms":[{"name":"metal binding site","type":"related"}],"termid":"SO:0001656"}


id: GO:0072223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric glomerular mesangium over time, from its formation to the mature structure. The metanephric glomerular mesangium is the thin membrane connective tissue composed of mesangial cells in the metanephros, which helps to support the capillary loops in a renal glomerulus.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular mesangium development","termid":"GO:0072109"},{"relation_name":"part_of","term_name":"metanephric glomerulus vasculature development","termid":"GO:0072239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric glomerular mesangium development","termid":"GO:0072223"}


id: PR:O14197
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC5D6.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C5D6.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.04","synonyms":[{"name":"Spom972h-SPAC5D6.04","type":"exact"}],"termid":"PR:O14197"}


id: PBO:0066946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 248","termid":"PBO:0066946"}


id: PBO:0029192
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-merotelic_kinetochore_attachment","termid":"PBO:0029192"}


id: PBO:0049534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.Z histone pseudogene 5","termid":"PBO:0049534"}


id: PBO:0076897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 51","termid":"PBO:0076897"}


id: GO:0004831
data:
  {"annotated_genes":["SJAG_04473","SJAG_00243"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111108,113476],"is_not":false,"summary":null,"term":"GO:0004831"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tyrosine + ATP + tRNA(Tyr) = L-tyrosyl-tRNA(Tyr) + AMP + diphosphate + 2 H+.","definition_xrefs":["RHEA:10220","EC:6.1.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00243":null,"SJAG_04473":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0016874","GO:0140101","GO:0003674"],"is_obsolete":false,"name":"tyrosine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R02918","Reactome:R-HSA-379980","MetaCyc:TYROSINE--TRNA-LIGASE-RXN","Reactome:R-HSA-380170"],"synonyms":[{"name":"L-tyrosine-tRNA(Tyr) ligase (AMP-forming) activity","type":"related"},{"name":"L-tyrosine-tRNATyr ligase (AMP-forming)","type":"related"},{"name":"L-tyrosine:tRNATyr ligase (AMP-forming)","type":"related"},{"name":"tyrosine tRNA synthetase activity","type":"related"},{"name":"tyrosine translase activity","type":"related"},{"name":"tyrosine-transfer RNA ligase activity","type":"related"},{"name":"tyrosine-transfer ribonucleate synthetase activity","type":"related"},{"name":"tyrosyl-tRNA ligase activity","type":"related"},{"name":"tyrosyl-tRNA synthetase activity","type":"exact"},{"name":"tyrosyl-transfer RNA synthetase activity","type":"related"},{"name":"tyrosyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"tyrosyl-transfer ribonucleic acid synthetase activity","type":"related"}],"termid":"GO:0004831","terms_by_termid":{"GO:0004831":null}}


id: PBO:0052596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin subunit alpha 4","termid":"PBO:0052596"}


id: PBO:0000621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid efflux transporter Atg22","termid":"PBO:0000621"}


id: SO:0002289
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"VIPER retrotransposons are members of the YR_retrotransposon (SO:0002286 superfamily with protein domains: RT, RH, YR. RT is a reverse transcriptase. RH is RNAse H. YR is Tyrosine recombinase. Inverted terminal repeats (ITRs) in VIPER are arranged in A-pol-B-A-B order where A and B represent ITRs. VIPER is only found in kinetoplastida genomes.","definition_xrefs":["PMID:16297462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"YR_retrotransposon","termid":"SO:0002286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Viper_YR_retrotransposon","synonyms":[{"name":"RYV retrotransposon","type":"exact"},{"name":"Viper YR retrotransposon","type":"exact"},{"name":"Viper retrotransposon","type":"exact"}],"termid":"SO:0002289"}


id: PBO:0080410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS37D subunit of ESCRT-I","termid":"PBO:0080410"}


id: GO:0021614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the glossopharyngeal nerve to attain its fully functional state. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion.","definition_xrefs":["ISBN:0838580343","GOC:jid","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"glossopharyngeal nerve development","termid":"GO:0021563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glossopharyngeal nerve maturation","synonyms":[{"name":"CN IX maturation","type":"related"}],"termid":"GO:0021614"}


id: PBO:0034183
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_inhibits","termid":"PBO:0034183"}


id: PBO:0027970
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_reactive_oxygen_species_level_during_nitrogen_starvation","termid":"PBO:0027970"}


id: PBO:0048637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein alpha 6, pseudogene","termid":"PBO:0048637"}


id: FYPO:0000572
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of mating projection assembly is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal shmoo formation","termid":"FYPO:0000568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000301","FYPO:0005447"],"is_obsolete":false,"name":"increased rate of shmoo formation","synonyms":[{"name":"increased rate of conjugation tube formation","type":"exact"},{"name":"increased rate of mating projection assembly","type":"exact"},{"name":"increased rate of mating projection formation","type":"exact"},{"name":"increased rate of shmoo assembly","type":"exact"},{"name":"shmoo formation: increased rate","type":"related"}],"termid":"FYPO:0000572"}


id: PBO:0002225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis CGR1 family (predicted)","termid":"PBO:0002225"}


id: FYPO:0005265
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of lead ions than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0002682"],"is_obsolete":false,"name":"resistance to lead","synonyms":[{"name":"resistance to lead during mitotic cell cycle","type":"related"},{"name":"resistance to lead during vegetative growth","type":"exact"},{"name":"resistance to lead ions","type":"exact"},{"name":"resistant to lead","type":"exact"}],"termid":"FYPO:0005265"}


id: PBO:0113743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 6","termid":"PBO:0113743"}


id: PBO:0046711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eva-1 homolog A, regulator of programmed cell death","termid":"PBO:0046711"}


id: PBO:0059422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome recycling factor pseudogene 1","termid":"PBO:0059422"}


id: PBO:0045012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIP2A intronic transcript 1","termid":"PBO:0045012"}


id: PBO:0089303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein, Hsp70 family, Ssb2-like","termid":"PBO:0089303"}


id: GO:0072119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the head kidney. This process pertains to the physical shaping of a rudimentary structure. The head kidney is a pronephros that consists of fused bilateral lobes located in the anterior part of the kidney.","definition_xrefs":["ZFA:0000669","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pronephros structural organization","termid":"GO:0072118"},{"relation_name":"part_of","term_name":"head kidney morphogenesis","termid":"GO:0072115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"head kidney structural organization","synonyms":[{"name":"head kidney structural organisation","type":"exact"}],"termid":"GO:0072119"}


id: PBO:0077936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE pseudogene 2","termid":"PBO:0077936"}


id: PBO:0002922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ski complex interacting GTPase (predicted)","termid":"PBO:0002922"}


id: PBO:0049797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperpolarization activated cyclic nucleotide gated potassium channel 3","termid":"PBO:0049797"}


id: PBO:0052962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kynureninase pseudogene 2","termid":"PBO:0052962"}


id: GO:0034527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,2-dihydroxy-8-carboxynaphthalene + O2 = 2-carboxy-2-hydroxy-8-carboxychromene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,2-dihydroxy-8-carboxynaphthalene dioxygenase activity (obsolete GO:0034527)","termid":"GO:0034527"}


id: PATO:0002334
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A adhesivity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"},{"relation_name":"is_a","term_name":"adhesive","termid":"PATO:0002331"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased adhesivity","termid":"PATO:0002334"}


id: PBO:0031427
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glycerol_dehydrogenase_activity","termid":"PBO:0031427"}


id: GO:0071063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive sensory mechanical stimulus resulting from air flow, convert it to a molecular signal, and recognize and characterize the signal.","definition_xrefs":["GOC:mah","PMID:19279637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of mechanical stimulus","termid":"GO:0050954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of wind","synonyms":[{"name":"perception of wind","type":"exact"},{"name":"sensory perception of air flow","type":"exact"}],"termid":"GO:0071063"}


id: GO:1902993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of amyloid precursor protein catabolic process.","definition_xrefs":["PMID:24499793","GOC:PARL","GOC:TermGenie","GO_REF:0000058","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"is_a","term_name":"regulation of amyloid precursor protein catabolic process","termid":"GO:1902991"},{"relation_name":"positively_regulates","term_name":"amyloid precursor protein catabolic process","termid":"GO:0042987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amyloid precursor protein catabolic process","synonyms":[{"name":"activation of APP catabolic process","type":"narrow"},{"name":"activation of APP catabolism","type":"narrow"},{"name":"activation of amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of amyloid precursor protein degradation","type":"narrow"},{"name":"positive regulation of APP catabolic process","type":"exact"},{"name":"positive regulation of APP catabolism","type":"exact"},{"name":"positive regulation of amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of APP catabolic process","type":"exact"},{"name":"up regulation of APP catabolism","type":"exact"},{"name":"up regulation of amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of APP catabolic process","type":"exact"},{"name":"up-regulation of APP catabolism","type":"exact"},{"name":"up-regulation of amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of APP catabolic process","type":"exact"},{"name":"upregulation of APP catabolism","type":"exact"},{"name":"upregulation of amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of amyloid precursor protein degradation","type":"exact"}],"termid":"GO:1902993"}


id: PBO:0078234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 16","termid":"PBO:0078234"}


id: GO:1990434
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron-dense plaque at the lower end of a stereocilia tip link that provides the anchor in the stereocilia membrane at the tip of the stereocilium from which the tip link rises.","definition_xrefs":["PMID:19447093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereocilia tip-link density","termid":"GO:1990427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"lower tip-link density","synonyms":[{"name":"LTLD","type":"exact"}],"termid":"GO:1990434"}


id: PBO:0050861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inducible T cell costimulator ligand","termid":"PBO:0050861"}


id: PBO:0075531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E11","termid":"PBO:0075531"}


id: PBO:0062970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 13","termid":"PBO:0062970"}


id: PBO:0081787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 714","termid":"PBO:0081787"}


id: PBO:0079314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 7","termid":"PBO:0079314"}


id: GO:0034302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an akinete, a thick-walled (encysted) dormant cell derived from the enlargement of a vegetative cell, is formed. Akinetes typically have granular cytoplasm, are more resistant to environmental extremes than vegetative cells, and are characteristic of several groups of Cyanobacteria.","definition_xrefs":["PMID:11948167","GOC:mah","GOC:ds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"akinete formation","termid":"GO:0034302"}


id: PBO:0065189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prospero homeobox 2","termid":"PBO:0065189"}


id: PBO:0039150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AK3 pseudogene 5","termid":"PBO:0039150"}


id: GO:2001314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a UDP-4-deoxy-4-formamido-beta-L-arabinopyranose.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar catabolic process","termid":"GO:0009227"},{"relation_name":"is_a","term_name":"amino sugar catabolic process","termid":"GO:0046348"},{"relation_name":"is_a","term_name":"UDP-4-deoxy-4-formamido-beta-L-arabinopyranose metabolic process","termid":"GO:2001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"UDP-4-deoxy-4-formamido-beta-L-arabinopyranose catabolic process","synonyms":[{"name":"UDP-4-deoxy-4-formamido-beta-L-arabinopyranose breakdown","type":"exact"},{"name":"UDP-4-deoxy-4-formamido-beta-L-arabinopyranose catabolism","type":"exact"},{"name":"UDP-4-deoxy-4-formamido-beta-L-arabinopyranose degradation","type":"exact"}],"termid":"GO:2001314"}


id: FYPO:0006242
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication forks stall at a lower frequency in mutant cells than in wild type during a cellular response to DNA damage.","definition_xrefs":["PMID:28806726","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication","termid":"FYPO:0001343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000293","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased replication fork stalling during cellular response to DNA damage","synonyms":[{"name":"decreased frequency of replication fork stalling during cellular response to DNA damage","type":"exact"},{"name":"decreased replication fork stalling during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"decreased replication fork stalling during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"reduced replication fork stalling during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0006242"}


id: GO:0102251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10'-apo-beta-carotenal + O2 = 13-apo-beta-carotenone + 4-methylocta-2,4,6-trienedial.","definition_xrefs":["EC:1.13.11.70","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"all-trans-beta-apo-10'-carotenal cleavage oxygenase activity","secondary_identifiers":["MetaCyc:RXN-12393","RHEA:26401"],"termid":"GO:0102251"}


id: PBO:0087615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the condensin complex; required for establishment and maintenance of chromosome condensation, chromosome segregation and chromatin binding by the complex; required for tRNA genes clustering at the nucleolus; required for replication slow zone breakage following Mec1p inactivation; transcription is cell cycle regulated, peaking in mitosis and declining in G1; protein is constitutively degraded by the proteasome; rate limiting for condensin recruitment to chromatin","termid":"PBO:0087615"}


id: PATO:0002512
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer flowing or coming together with another entity.","definition_xrefs":["Merriam-Webster:confluent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"confluent with","termid":"PATO:0002512"}


id: PBO:0059958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 3","termid":"PBO:0059958"}


id: SO:0001407
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing the nature of a proteinaceous polymer, where by the amino acid units are joined by peptide bonds.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymer_attribute","termid":"SO:0000443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl","termid":"SO:0001407"}


id: PBO:0062409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 36 pseudogene","termid":"PBO:0062409"}


id: PBO:0056943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9-3","termid":"PBO:0056943"}


id: PBO:0084776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial outer membrane protein of unknown function; predicted to have 4 transmembrane segments; import is mediated by Tom70p and Mim1p; interacts genetically with a cdc4 mutation; SCM4 has a paralog, ATG33, that arose from the whole genome duplication","termid":"PBO:0084776"}


id: PBO:0111904
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEMD3 domain","termid":"PBO:0111904"}


id: PBO:0058908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12126","termid":"PBO:0058908"}


id: PBO:0089432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Bet1","termid":"PBO:0089432"}


id: PBO:0045207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C3","termid":"PBO:0045207"}


id: PBO:0045795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EGF like repeats and discoidin domains 3","termid":"PBO:0045795"}


id: FYPO:0001948
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the cytosol is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"altered level of substance in cytosol","termid":"FYPO:0001604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased level of substance in cytosol","synonyms":[{"name":"increased cytosolic level of substance","type":"exact"},{"name":"increased level of substance in cytosol during mitotic cell cycle","type":"related"},{"name":"increased level of substance in cytosol during vegetative growth","type":"exact"}],"termid":"FYPO:0001948"}


id: PBO:0069607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 884, pseudogene","termid":"PBO:0069607"}


id: GO:0080116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of glucuronate to the xylan backbone of glucuronoxylan molecule.","definition_xrefs":["PMID:18980649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"glucuronoxylan glucuronosyltransferase activity","termid":"GO:0080116"}


id: _global:integral_part_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X integral_part_of Y if and only if: X part_of Y and Y has_part X.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral_part_of","termid":"_global:integral_part_of"}


id: PBO:0002545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosyltransferase Alg8 (predicted)","termid":"PBO:0002545"}


id: PBO:0089062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1/TPR repeat protein1, 3-beta-glucan synthase regulatory factor Chf3/Chr4","termid":"PBO:0089062"}


id: PBO:0054667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2073","termid":"PBO:0054667"}


id: GO:0102165
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + (Z)-hex-3-en-1-ol = (3Z)-hex-3-en-1-yl acetate + coenzyme A.","definition_xrefs":["RHEA:28254","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"(Z)-3-hexen-1-ol acetyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11852","EC:2.3.1.195"],"termid":"GO:0102165"}


id: PBO:0001035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human 4F5S homolog","termid":"PBO:0001035"}


id: PBO:0086301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in ubiquinone (Coenzyme Q) biosynthesis; possibly functioning in stabilization of Coq7p; located on matrix face of mitochondrial inner membrane; component of a mitochondrial ubiquinone-synthesizing complex; human homolog COQ4 can complement yeast coq4 null mutant","termid":"PBO:0086301"}


id: SO:0001256
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polyploid where the multiple chromosome set was derived from a different organism.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyploid","termid":"SO:0001254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allopolyploid","secondary_identifiers":["http://en.wikipedia.org/wiki/Allopolyploid"],"termid":"SO:0001256"}


id: GO:0019174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tetrahydrothiophene 1-oxide + reduced acceptor = tetrahydrothiophene + acceptor.","definition_xrefs":["MetaCyc:THTOREDUCT-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"tetrahydrothiophene 1-oxide reductase activity","termid":"GO:0019174"}


id: FYPO:0006813
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 9 of histone H3 in centromere inner repeat regions does not occur.","definition_xrefs":["PomBase:mah","PMID:30652128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K9 methylation during vegetative growth","termid":"FYPO:0002566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0002494","FYPO:0001320","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"abolished histone H3-K9 trimethylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"abolished histone H3 K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 trimethylation at centromere CENP-A containing region during vegetative growth","type":"related"},{"name":"abolished histone H3-K9 trimethylation at centromere imr during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 trimethylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"abolished histone H3-K9 trimethylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"abolished histone H3K9me3 at centromere inner repeat during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 trimethylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"histone H3-K9 trimethylation abolished at centromere inner repeat during vegetative growth","type":"exact"},{"name":"histone H3-K9 trimethylation absent at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006813"}


id: PBO:0043763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX11 pseudogene 1","termid":"PBO:0043763"}


id: FYPO:0003685
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer U2/U5/U6 snRNP complexes than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased U2/U5/U6 snRNP complex level","synonyms":[{"name":"U2/U5/U6 snRNP complex present at decreased level","type":"exact"},{"name":"decreased U2-type post-mRNA release spliceosomal complex level","type":"exact"},{"name":"decreased U2/U5/U6 snRNP complex level during mitotic cell cycle","type":"related"},{"name":"decreased U2/U5/U6 snRNP complex level during vegetative growth","type":"exact"},{"name":"decreased level of U2/U5/U6 snRNP complexes","type":"related"},{"name":"reduced U2/U5/U6 snRNP complex level","type":"exact"}],"termid":"FYPO:0003685"}


id: PBO:0111927
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating type M-specific polypeptide Mi","termid":"PBO:0111927"}


id: GO:0140888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by type II interferon binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription. Type II interferon is also known as interferon-gamma.","definition_xrefs":["GOC:add","GOC:signaling","PMID:32464097","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interferon-mediated signaling pathway","synonyms":[{"name":"interferon signaling pathway","type":"exact"},{"name":"interferon-activated signaling pathway","type":"exact"}],"termid":"GO:0140888"}


id: PBO:0045051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLEC1 pseudogene 1","termid":"PBO:0045051"}


id: PBO:0050197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 14","termid":"PBO:0050197"}


id: PBO:0108677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colon, intestine and stomach enriched 1","termid":"PBO:0108677"}


id: PBO:0049654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 8","termid":"PBO:0049654"}


id: PBO:0015250
data:
  {"annotation_feature_type":"gene","cv_name":"ex_tools","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pat1-as2 allele undergoes synchronous meiosis at 25 degrees C in presence of ATP analog","termid":"PBO:0015250"}


id: GO:0010083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the size and shape of a vegetative meristem.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meristem growth","termid":"GO:0010075"},{"relation_name":"is_a","term_name":"regulation of developmental vegetative growth","termid":"GO:1905613"},{"relation_name":"regulates","term_name":"vegetative meristem growth","termid":"GO:0010448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vegetative meristem growth","synonyms":[{"name":"regulation of vegetative meristem size","type":"exact"}],"termid":"GO:0010083"}


id: PBO:0113020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta 5 subunit of the 20S proteasome; responsible for the chymotryptic activity of the proteasome; localizes to peroxisomes in oleate-growing cells","termid":"PBO:0113020"}


id: PBO:0000975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Cwf2","termid":"PBO:0000975"}


id: FYPO:0001550
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell differs from normal during a cellular response to zinc ions. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered protein level during vegetative growth","termid":"FYPO:0001325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"altered protein level during cellular response to zinc ion","synonyms":[{"name":"abnormal protein level during cellular response to zinc ion","type":"exact"},{"name":"altered cellular protein level during cellular response to zinc ion during vegetative growth","type":"exact"},{"name":"altered protein level during cellular response to zinc","type":"exact"},{"name":"altered protein level during cellular response to zinc ion during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001550"}


id: SO:1000058
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA point mutation that causes a substitution of an amino acid by an other.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000058 sequence_variant_causing_non_synonymous_codon_change_in_transcript (obsolete SO:1000058)","synonyms":[{"name":"mutation causing non synonymous codon change in transcript","type":"related"},{"name":"non-synonymous codon change in transcript","type":"exact"},{"name":"sequence variant causing non synonymous codon change in transcript","type":"exact"}],"termid":"SO:1000058"}


id: PBO:0016972
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in schizosaccharomyces","termid":"PBO:0016972"}


id: PBO:0012532
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_commitment_to","termid":"PBO:0012532"}


id: GO:1903307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of regulated secretory pathway.","definition_xrefs":["PMID:12526776","GO_REF:0000058","GOC:PARL","GOC:pad","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of exocytosis","termid":"GO:0045921"},{"relation_name":"is_a","term_name":"regulation of regulated secretory pathway","termid":"GO:1903305"},{"relation_name":"positively_regulates","term_name":"regulated exocytosis","termid":"GO:0045055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"positive regulation of regulated secretory pathway","synonyms":[{"name":"activation of regulated secretory pathway","type":"narrow"},{"name":"up regulation of regulated secretory pathway","type":"exact"},{"name":"up-regulation of regulated secretory pathway","type":"exact"},{"name":"upregulation of regulated secretory pathway","type":"exact"}],"termid":"GO:1903307"}


id: PBO:0030999
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_degradation_during_vegetative_growth","termid":"PBO:0030999"}


id: GO:2000497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell proliferation involved in compound eye morphogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in compound eye morphogenesis","termid":"GO:2000495"},{"relation_name":"positively_regulates","term_name":"cell proliferation involved in compound eye morphogenesis","termid":"GO:0035736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell proliferation involved in compound eye morphogenesis","termid":"GO:2000497"}


id: PBO:0080567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat and FYVE domain containing 2","termid":"PBO:0080567"}


id: GO:0120269
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A rod-shaped protein complex containing Centrin4 protein that flanks the flagellum attachment zone (FAZ) filament and the quartet microtubules.","definition_xrefs":["PMID:26540076","GOC:krc","PMID:31217284","GOC:ach"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"part_of","term_name":"ciliary pocket","termid":"GO:0020016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ciliary centrin arm","termid":"GO:0120269"}


id: GO:0140770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl-[protein] + tetradecanoyl-CoA = CoA + H+ + N(6)-tetradecanoyl-L-lysyl-[protein].","definition_xrefs":["PMID:1402651","RHEA:59752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine N6-myristoyltransferase activity","termid":"GO:0018030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0140096","GO:0016746"],"is_obsolete":false,"name":"CoA-dependent peptidyl-lysine N6-myristoyltransferase activity","termid":"GO:0140770"}


id: GO:0071374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a parathyroid hormone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"response to parathyroid hormone","termid":"GO:0071107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to parathyroid hormone stimulus","termid":"GO:0071374"}


id: PBO:0064947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p53 regulation associated lncRNA","termid":"PBO:0064947"}


id: PBO:0069454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 719, pseudogene","termid":"PBO:0069454"}


id: PATO:0002301
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that has a value that is decreased compared to normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"deviation(from_normal)","termid":"PATO:0000069"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased quality","termid":"PATO:0002301"}


id: PBO:0089967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mam33 family protein","termid":"PBO:0089967"}


id: PBO:0043286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 4 member O, pseudogene","termid":"PBO:0043286"}


id: FYPO:0000892
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3 acetylation during vegetative growth","termid":"FYPO:0002363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K9 acetylation during vegetative growth","synonyms":[{"name":"increased histone H3-K9 acetylation during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0000892"}


id: PR:O94585
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1442.13c gene.","definition_xrefs":["UniProtKB:O94585","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated protein C1442.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.13c","synonyms":[{"name":"Spom972h-SPCC1442.13c","type":"exact"},{"name":"meiotic chromosome segregation protein C1442.13c (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94585"}


id: GO:0004568
data:
  {"annotated_genes":["SJAG_00620"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97571],"is_not":false,"summary":null,"term":"GO:0004568"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins.","definition_xrefs":["PMID:11468293","EC:3.2.1.14","GOC:bf","GOC:kah","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00620":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824"],"is_obsolete":false,"name":"chitinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6786421","MetaCyc:3.2.1.14-RXN"],"synonyms":[{"name":"1,4-beta-poly-N-acetylglucosaminidase activity","type":"related"},{"name":"beta-1,4-poly-N-acetyl glucosamidinase activity","type":"related"},{"name":"chitodextrinase activity","type":"related"},{"name":"poly-beta-glucosaminidase activity","type":"related"},{"name":"poly[1,4-(N-acetyl-beta-D-glucosaminide)] glycanohydrolase activity","type":"related"}],"termid":"GO:0004568","terms_by_termid":{"GO:0004568":null}}


id: PR:000050492
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A division mal foutue 1 protein (Schizosaccharomyces pombe) that has been phosphorylated at the positions equivalent to Ser-110, Ser-127, Ser-218, Ser-227, Ser-329, Ser-432, Ser-452, Ser-464, and Ser-531 of the amino acid sequence represented by UniProtKB:P78953. Example: UniProtKB:P78953, Ser-110/Ser-127/Ser-218/Ser-227/Ser-329/Ser-432/Ser-452/Ser-464/Ser-531, MOD:00046.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:30853434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"division mal foutue 1 protein (Schizosaccharomyces pombe)","termid":"PR:000050491"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mid1/Phos","pombase_gene_id":"SPCC4B3.15","synonyms":[{"name":"PomBase_original_PRO_term_name: division mal foutue 1 protein phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-mid1/Phos:1","type":"exact"},{"name":"UniProtKB:P78953, Ser-110/Ser-127/Ser-218/Ser-227/Ser-329/Ser-432/Ser-452/Ser-464/Ser-531, MOD:00046","type":"narrow"},{"name":"mid1/Phos","type":"exact"},{"name":"mid1/Phos:(S110,S127,S218,S227,S329,S432,S452,S464,S531)","type":"exact"}],"termid":"PR:000050492"}


id: PBO:0077224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane channel like 1","termid":"PBO:0077224"}


id: GO:0034181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 13 signaling pathway.","definition_xrefs":["PMID:16551253","GOC:add","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 13 signaling pathway","termid":"GO:0034179"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 13 signaling pathway","termid":"GO:0034178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 13 signaling pathway","synonyms":[{"name":"positive regulation of TLR13 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 13 signalling pathway","type":"exact"}],"termid":"GO:0034181"}


id: GO:0031757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an Edg-4 lysophosphatidic acid receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial differentiation G protein-coupled receptor binding","termid":"GO:0031753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"Edg-4 lysophosphatidic acid receptor binding","synonyms":[{"name":"Edg-4 lysophosphatidic acid receptor ligand","type":"narrow"},{"name":"LPA2 receptor binding","type":"exact"}],"termid":"GO:0031757"}


id: GO:0015965
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015966"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving diadenosine tetraphosphate, a derivative of the nucleoside adenosine with four phosphate groups attached.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diadenosine polyphosphate metabolic process","termid":"GO:0015959"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"diadenosine tetraphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"diadenosine tetraphosphate metabolism","type":"exact"}],"termid":"GO:0015965","terms_by_termid":{"GO:0015966":null}}


id: GO:0021679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cerebellar molecular layer nerve over time, from its formation to the mature structure. The molecular layer is the outermost layer of the cerebellar cortex. It contains the parallel fibers of the granule cells, interneurons such as stellate and basket cells, and the dendrites of the underlying Purkinje cells.","definition_xrefs":["GOC:jid","GOC:dgh","GO_REF:0000021","GOC:dph","GOC:cls","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"cerebellar cortex development","termid":"GO:0021695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar molecular layer development","termid":"GO:0021679"}


id: GO:0102688
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + dihydrozeatin = H+ + 9-(alpha-D-glucosyl)dihydrozeatin + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydrozeatin UDP glycosyltransferase activity (obsolete GO:0102688)","termid":"GO:0102688"}


id: PBO:0043139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 7","termid":"PBO:0043139"}


id: GO:0047650
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O-alkylglycerone + ATP = O-alkylglycerone phosphate + ADP + 2 H+.","definition_xrefs":["RHEA:23088","EC:2.7.1.84"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"alkylglycerone kinase activity","secondary_identifiers":["MetaCyc:ALKYLGLYCERONE-KINASE-RXN","KEGG_REACTION:R03944"],"synonyms":[{"name":"ATP:O-alkylglycerone phosphotransferase activity","type":"related"},{"name":"alkyldihydroxyacetone kinase (phosphorylating)","type":"related"},{"name":"alkyldihydroxyacetone kinase activity","type":"related"}],"termid":"GO:0047650"}


id: FYPO:0006150
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing etoposide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002058","FYPO:0000257","FYPO:0002057","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on etoposide","synonyms":[{"name":"normal cell population growth in presence of etoposide","type":"exact"},{"name":"normal cell population growth on etoposide","type":"exact"},{"name":"normal cellular response to etoposide","type":"related"},{"name":"normal vegetative cell population growth on etoposide","type":"exact"}],"termid":"FYPO:0006150"}


id: PBO:0074670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 56","termid":"PBO:0074670"}


id: PBO:0088260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex deubiquitinating submodule subunit Sgf73","termid":"PBO:0088260"}


id: FYPO:0001069
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115577,115576,115578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000618"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of one or more mitotic cell cycle phases is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of cell cycle phase","termid":"FYPO:0000408"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase","termid":"FYPO:0002736"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of mitotic cell cycle phase","references_by_uniquename":{"PMID:23786411":null},"single_locus_annotated_genes":["SJAG_03351","SJAG_03575","SJAG_01956"],"single_locus_genotype_uniquenames":["apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased duration of mitotic cell cycle phase during vegetative growth","type":"exact"},{"name":"prolonged mitotic cell cycle phase","type":"exact"}],"termid":"FYPO:0001069","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0000618":null}}


id: PBO:0003271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor EF-1 alpha Ef1a-c","termid":"PBO:0003271"}


id: GO:1903617
data:
  {"annotated_genes":["SJAG_00845","SJAG_02392","SJAG_01787","SJAG_02838"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86827,91915,99770,106823,115268],"is_not":false,"summary":null,"term":"GO:1903617"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic cytokinesis, division site positioning.","definition_xrefs":["PMID:9852154","PMID:21246752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cytokinesis, division site positioning","termid":"GO:1902472"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cytokinetic process","termid":"GO:1903438"},{"relation_name":"is_a","term_name":"positive regulation of cytokinesis, site selection","termid":"GO:2000076"},{"relation_name":"positively_regulates","term_name":"mitotic cytokinesis, division site positioning","termid":"GO:1902408"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_01787":null,"SJAG_02392":null,"SJAG_02838":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0000281"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000281","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic cytokinesis, division site positioning","references_by_uniquename":{"GO_REF:0000107":null,"PMID:25866389":null},"synonyms":[{"name":"positive regulation of mitotic cytokinesis, site selection","type":"exact"}],"termid":"GO:1903617","terms_by_termid":{"GO:1903617":null}}


id: PBO:0072683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUN and FYVE domain containing 4","termid":"PBO:0072683"}


id: GO:0044046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance that is released by the other organism. This includes substances that are released via pathogen cell lysis.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via substance released outside of symbiont (obsolete GO:0044046)","synonyms":[{"name":"interaction with host via substance released outside of symbiont cells","type":"exact"}],"termid":"GO:0044046"}


id: PBO:0048893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 13, pseudogene","termid":"PBO:0048893"}


id: FYPO:0006468
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of mature ribosomal RNA (rRNA) measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle. Total rRNA or a specific rRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered rRNA or precursor level","termid":"FYPO:0005996"},{"relation_name":"is_a","term_name":"altered mature ncRNA level during vegetative growth","termid":"FYPO:0006465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"altered mature rRNA level during vegetative growth","synonyms":[{"name":"abnormal rRNA level during vegetative growth","type":"broad"},{"name":"altered cellular mature rRNA level during vegetative growth","type":"exact"},{"name":"altered mature rRNA level during mitotic cell cycle","type":"related"},{"name":"altered mature rRNA transcript level during vegetative growth","type":"exact"},{"name":"altered mature ribosomal RNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0006468"}


id: PBO:0065668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase receptor type Q","termid":"PBO:0065668"}


id: GO:2000282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular amino acid biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"regulates","term_name":"amino acid biosynthetic process","termid":"GO:0008652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"regulation of cellular amino acid biosynthetic process","synonyms":[{"name":"regulation of amino acid biosynthetic process","type":"exact"},{"name":"regulation of cellular amino acid anabolism","type":"exact"},{"name":"regulation of cellular amino acid biosynthesis","type":"exact"},{"name":"regulation of cellular amino acid formation","type":"exact"},{"name":"regulation of cellular amino acid synthesis","type":"exact"}],"termid":"GO:2000282"}


id: PBO:0084456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosyltransferase; involved in asparagine-linked glycosylation in the endoplasmic reticulum (ER); essential for viability; human homolog ALG1 complements yeast null mutant","termid":"PBO:0084456"}


id: GO:0042899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which arabinan is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide transport","termid":"GO:0015774"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"arabinan transmembrane transport","synonyms":[{"name":"arabinan transport","type":"related"}],"termid":"GO:0042899"}


id: PBO:0064140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase N1","termid":"PBO:0064140"}


id: GO:0030207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of chondroitin sulfate, any member of a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues, the repeat units of which consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan catabolic process","termid":"GO:0006027"},{"relation_name":"is_a","term_name":"chondroitin sulfate metabolic process","termid":"GO:0030204"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006790"],"is_obsolete":false,"name":"chondroitin sulfate catabolic process","secondary_identifiers":["MetaCyc:PWY-6573","MetaCyc:PWY-6572"],"synonyms":[{"name":"chondroitin sulfate breakdown","type":"exact"},{"name":"chondroitin sulfate catabolism","type":"exact"},{"name":"chondroitin sulfate degradation","type":"exact"},{"name":"chondroitin sulphate catabolic process","type":"exact"},{"name":"chondroitin sulphate catabolism","type":"exact"}],"termid":"GO:0030207"}


id: PBO:0061505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurturin","termid":"PBO:0061505"}


id: PBO:0017461
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_pathogen","termid":"PBO:0017461"}


id: PBO:0090719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-BAR domain protein Bzz1","termid":"PBO:0090719"}


id: PBO:0078342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 8-1","termid":"PBO:0078342"}


id: PBO:0071230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 71","termid":"PBO:0071230"}


id: GO:1903286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of potassium ion import.","definition_xrefs":["PMID:10636900","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:TermGenie","GO_REF:0000058","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of potassium ion transmembrane transport","termid":"GO:1901379"},{"relation_name":"regulates","term_name":"potassium ion import across plasma membrane","termid":"GO:1990573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of potassium ion import","synonyms":[{"name":"regulation of potassium import","type":"exact"},{"name":"regulation of potassium ion uptake","type":"exact"}],"termid":"GO:1903286"}


id: GO:1905954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lipid localization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:17564681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of lipid localization","termid":"GO:1905952"},{"relation_name":"positively_regulates","term_name":"lipid localization","termid":"GO:0010876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipid localization","synonyms":[{"name":"activation of lipid localisation","type":"narrow"},{"name":"activation of lipid localization","type":"narrow"},{"name":"positive regulation of lipid localisation","type":"exact"},{"name":"up regulation of lipid localisation","type":"exact"},{"name":"up regulation of lipid localization","type":"exact"},{"name":"up-regulation of lipid localisation","type":"exact"},{"name":"up-regulation of lipid localization","type":"exact"},{"name":"upregulation of lipid localisation","type":"exact"},{"name":"upregulation of lipid localization","type":"exact"}],"termid":"GO:1905954"}


id: GO:0097321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell switches from growing as a filament (elongated cells attached end-to-end) to growing as a round budding cell. An example of this is observed in Candida albicans.","definition_xrefs":["GOC:di","PMID:14617167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell growth mode switching, filamentous to budding","termid":"GO:0097321"}


id: PR:O59740
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mod5 gene.","definition_xrefs":["UniProtKB:O59740","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell polarity protein mod5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.04","synonyms":[{"name":"Spom972h-mod5","type":"exact"},{"name":"tea1-anchoring protein mod5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59740"}


id: PBO:0000916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geranyltranstransferase Fps1","termid":"PBO:0000916"}


id: PR:P36590
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thymidylate kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10344:SF0","PRO:DNx","OMA:SCHPO05042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC70.07c","secondary_identifiers":["UniProtKB:P36590"],"synonyms":[{"name":"Spom972h-DTYMK","type":"exact"},{"name":"dTMP kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36590"}


id: PBO:0044363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 52","termid":"PBO:0044363"}


id: PBO:0049484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.8 linker histone","termid":"PBO:0049484"}


id: PBO:0042400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 6","termid":"PBO:0042400"}


id: PBO:0074221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 44 member 5","termid":"PBO:0074221"}


id: GO:0004755
data:
  {"annotated_genes":["SJAG_01061"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105750],"is_not":false,"summary":null,"term":"GO:0004755"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-saccharopine + H2O + NADP+ = L-allysine + L-glutamate + H+ + NADPH.","definition_xrefs":["RHEA:10020","EC:1.5.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"saccharopine dehydrogenase activity","termid":"GO:0004753"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01061":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"saccharopine dehydrogenase (NADP+, L-glutamate-forming) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R02315","MetaCyc:RXN3O-127"],"synonyms":[{"name":"6-N-(L-1,3-dicarboxypropyl)-L-lysine:NADP+ oxidoreductase (L-glutamate-forming)","type":"related"},{"name":"N6-(L-1,3-dicarboxypropyl)-L-lysine:NADP+ oxidoreductase (L-glutamate-forming)","type":"related"},{"name":"aminoadipate semialdehyde-glutamate reductase activity","type":"related"},{"name":"aminoadipic semialdehyde-glutamate reductase activity","type":"related"},{"name":"aminoadipic semialdehyde-glutamic reductase activity","type":"related"},{"name":"epsilon-N-(L-glutaryl-2)-L-lysine:NAD+(P) oxidoreductase (L-2-aminoadipate-semialdehyde forming)","type":"related"},{"name":"saccharopine (nicotinamide adenine dinucleotide phosphate, glutamate-forming) dehydrogenase activity","type":"related"},{"name":"saccharopine reductase activity","type":"related"}],"termid":"GO:0004755","terms_by_termid":{"GO:0004755":null}}


id: GO:0044685
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tetrahydromethanopterin + L-serine = 5,10-methylenetetrahydromethanopterin + glycine + H2O.","definition_xrefs":["PMID:12902326","GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tetrahydromethanopterin-dependent serine hydroxymethyltransferase activity (obsolete GO:0044685)","termid":"GO:0044685"}


id: FYECO:0000251
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which amitrole (3-amino-1,2,4-triazole) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ amitrole","synonyms":[{"name":"+ 3-AT","type":"exact"},{"name":"+ 3-amino-1,2,4-triazole","type":"exact"},{"name":"+ 3AT","type":"exact"}],"termid":"FYECO:0000251"}


id: PBO:0080962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 5","termid":"PBO:0080962"}


id: PBO:0042911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin 1 pseudogene 8","termid":"PBO:0042911"}


id: PBO:0013748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-4 methylsterol oxidase Erg25 (predicted)","termid":"PBO:0013748"}


id: FYPO:0007854
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the kinetochore of a chromosome is normal (i.e. indistinguishable from wild type) during anaphase of meiosis I.","definition_xrefs":["PomBase:mah","PMID:11331883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to kinetochore during meiosis I","termid":"FYPO:0004214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to kinetochore during meiotic anaphase I","synonyms":[{"name":"normal protein localisation to kinetochore during meiotic anaphase I","type":"exact"},{"name":"normal protein localization to kinetochore during meiosis I anaphase","type":"exact"}],"termid":"FYPO:0007854"}


id: PBO:0074253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLCO1B3-SLCO1B7 readthrough","termid":"PBO:0074253"}


id: PBO:0075775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF3 pseudogene 4","termid":"PBO:0075775"}


id: SO:0002244
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript which is partially duplicated due to duplication of DNA, leading to a new transcript that is only partial and likely nonfunctional.","direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_variant","termid":"SO:0001576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partially_duplicated_transcript","synonyms":[{"name":"partially duplicated transcript","type":"exact"}],"termid":"SO:0002244"}


id: GO:1902940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of intracellular calcium activated chloride channel activity.","definition_xrefs":["GO_REF:0000059","PMID:22946059","GOC:TermGenie","GOC:als"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of intracellular calcium activated chloride channel activity (obsolete GO:1902940)","synonyms":[{"name":"activation of intracellular calcium activated chloride channel activity","type":"narrow"},{"name":"up regulation of intracellular calcium activated chloride channel activity","type":"exact"},{"name":"up-regulation of intracellular calcium activated chloride channel activity","type":"exact"},{"name":"upregulation of intracellular calcium activated chloride channel activity","type":"exact"}],"termid":"GO:1902940"}


id: PBO:0056439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 12","termid":"PBO:0056439"}


id: GO:0062145
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-glutamate + L-propargylglycine = ADP + H+ + L-gamma-glutamyl-L-propargylglycine + phosphate.","definition_xrefs":["RHEA:59896","PMID:30867596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"L-propargylglycine--L-glutamate ligase activity","termid":"GO:0062145"}


id: GO:0060766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the androgen receptor signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033144"},{"relation_name":"is_a","term_name":"regulation of androgen receptor signaling pathway","termid":"GO:0060765"},{"relation_name":"negatively_regulates","term_name":"androgen receptor signaling pathway","termid":"GO:0030521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of androgen receptor signaling pathway","synonyms":[{"name":"negative regulation of androgen receptor signalling pathway","type":"exact"}],"termid":"GO:0060766"}


id: GO:0050554
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-copalyl diphosphate = (-)-abietadiene + diphosphate.","definition_xrefs":["EC:4.2.3.18","RHEA:13873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"abietadiene synthase activity","secondary_identifiers":["KEGG_REACTION:R06301","MetaCyc:4.2.3.18-RXN"],"synonyms":[{"name":"(+)-copalyl-diphosphate diphosphate-lyase (cyclizing, (-)-abietadiene-forming)","type":"related"},{"name":"abietadiene cyclase activity","type":"related"},{"name":"copalyl-diphosphate diphosphate-lyase (cyclizing)","type":"related"}],"termid":"GO:0050554"}


id: PBO:0045077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLG associated protein 4","termid":"PBO:0045077"}


id: GO:0019705
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a myristoyl (systematic name, tetradecanoyl) group to a sulfur atom on a cysteine residue of a protein molecule in the reaction: tetradecanoyl-CoA + L-cysteinyl-[protein] = CoA + S-tetradecanoyl-L-cysteinyl-[protein].","definition_xrefs":["GOC:ai","PMID:22247542","RHEA:59736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myristoyltransferase activity","termid":"GO:0019107"},{"relation_name":"is_a","term_name":"protein-cysteine S-acyltransferase activity","termid":"GO:0019707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"protein-cysteine S-myristoyltransferase activity","termid":"GO:0019705"}


id: GO:1905079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cerebellar neuron development.","definition_xrefs":["PMID:26609159","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"regulates","term_name":"cerebellar neuron development","termid":"GO:0098749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cerebellar neuron development","termid":"GO:1905079"}


id: PBO:0069035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 280, pseudogene","termid":"PBO:0069035"}


id: PBO:0060205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial E3 ubiquitin protein ligase 1","termid":"PBO:0060205"}


id: GO:0016357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrethroid susceptibility/resistance (obsolete GO:0016357)","synonyms":[{"name":"pyrethroid susceptibility/resistance","type":"exact"}],"termid":"GO:0016357"}


id: PBO:0046177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS transcription factor ELK4","termid":"PBO:0046177"}


id: GO:0001084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a basal RNA polymerase II transcription factor of the TFIID class in order to modulate transcription. The transcription factor may or may not also interact selectively with DNA as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, TFIID-class binding (obsolete GO:0001084)","synonyms":[{"name":"TFIID-class binding transcription factor activity","type":"exact"}],"termid":"GO:0001084"}


id: GO:1901117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cephamycin C.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic catabolic process","termid":"GO:0030655"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"cephamycin C metabolic process","termid":"GO:1901116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790","GO:0044248"],"is_obsolete":false,"name":"cephamycin C catabolic process","synonyms":[{"name":"cephamycin C breakdown","type":"exact"},{"name":"cephamycin C catabolism","type":"exact"},{"name":"cephamycin C degradation","type":"exact"}],"termid":"GO:1901117"}


id: PBO:0064299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polo like kinase 2","termid":"PBO:0064299"}


id: GO:0035444
data:
  {"annotated_genes":["SJAG_04830"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112069],"is_not":false,"summary":null,"term":"GO:0035444"},{"annotations":[112068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098716"}]},"cv_name":"biological_process","definition":"The directed movement of nickel (Ni) cations across a membrane by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nickel cation transport","termid":"GO:0015675"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04830":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"nickel cation transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nickel cation membrane transport","type":"exact"}],"termid":"GO:0035444","terms_by_termid":{"GO:0035444":null,"GO:0098716":null}}


id: FYPO:0000479
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which one or both meiotic nuclear division(s) begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"premature meiosis","synonyms":[{"name":"advanced meiosis","type":"exact"},{"name":"meiosis: premature","type":"related"},{"name":"premature meiotic nuclear division","type":"exact"}],"termid":"FYPO:0000479"}


id: SO:0000075
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a gene when the 3' region overlaps with another gene's 3' region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overlapping","termid":"SO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_three_prime_overlap","synonyms":[{"name":"three prime-three prime overlap","type":"exact"}],"termid":"SO:0000075"}


id: PBO:0039980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL5A pseudogene 3","termid":"PBO:0039980"}


id: PBO:0042233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Y like 5 (pseudogene)","termid":"PBO:0042233"}


id: PBO:0031027
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_concentration_of_pheromone_in_growth_medium","termid":"PBO:0031027"}


id: PBO:0066710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 7","termid":"PBO:0066710"}


id: GO:0045694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of embryo sac egg cell differentiation.","definition_xrefs":["GOC:go_curators","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"embryo sac egg cell differentiation","termid":"GO:0009560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of embryo sac egg cell differentiation","synonyms":[{"name":"regulation of female gametophyte egg cell differentiation","type":"exact"}],"termid":"GO:0045694"}


id: GO:0007286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a spermatid over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell development","termid":"GO:0007281"},{"relation_name":"part_of","term_name":"spermatid differentiation","termid":"GO:0048515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermatid development","secondary_identifiers":["Wikipedia:Spermiogenesis"],"synonyms":[{"name":"spermatid cell development","type":"exact"},{"name":"spermiogenesis","type":"exact"}],"termid":"GO:0007286"}


id: GO:2000520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of immunological synapse formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte activation","termid":"GO:0051249"},{"relation_name":"regulates","term_name":"immunological synapse formation","termid":"GO:0001771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of immunological synapse formation","synonyms":[{"name":"regulation of formation of immunological synapse","type":"exact"}],"termid":"GO:2000520"}


id: PBO:0028905
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_cellular_response_to_calcium_ion","termid":"PBO:0028905"}


id: GO:0009333
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Cysteine synthase is a multienzyme complex made up, in E. coli, of the heteromeric hexamer serine acetyltransferase and the homodimer O-acetylserine (thiol)-lyase A.","definition_xrefs":["PMID:10993149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"cysteine synthase complex","secondary_identifiers":["MetaCyc:CYSSYNMULTI-CPLX"],"termid":"GO:0009333"}


id: GO:0031828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2C serotonin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 2C serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 2C receptor binding","type":"exact"},{"name":"type 2C serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031828"}


id: GO:0099089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of endoplasmic reticulum into a postsynaptic compartment such as a dendritic spine.","definition_xrefs":["PMID:21151132","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of ER localization","termid":"GO:0051686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of endoplasmic reticulum localization to postsynapse","synonyms":[{"name":"establishment of ER localization to postsynapse","type":"exact"}],"termid":"GO:0099089"}


id: GO:1901409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphorylation of RNA polymerase II C-terminal domain.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphorylation of RNA polymerase II C-terminal domain (obsolete GO:1901409)","synonyms":[{"name":"activation of CTD domain phosphorylation of RNA polymerase II","type":"exact"},{"name":"activation of generation of II(0) form of RNA polymerase II","type":"exact"},{"name":"activation of generation of hyperphosphorylated CTD of RNA polymerase II","type":"exact"},{"name":"activation of hyperphosphorylation of RNA polymerase II C-terminal domain","type":"exact"},{"name":"activation of phosphorylation of RNA polymerase II C-terminal domain","type":"narrow"},{"name":"positive regulation of CTD domain phosphorylation of RNA polymerase II","type":"exact"},{"name":"positive regulation of generation of II(0) form of RNA polymerase II","type":"exact"},{"name":"positive regulation of generation of hyperphosphorylated CTD of RNA polymerase II","type":"exact"},{"name":"positive regulation of hyperphosphorylation of RNA polymerase II C-terminal domain","type":"exact"},{"name":"up regulation of CTD domain phosphorylation of RNA polymerase II","type":"exact"},{"name":"up regulation of generation of II(0) form of RNA polymerase II","type":"exact"},{"name":"up regulation of generation of hyperphosphorylated CTD of RNA polymerase II","type":"exact"},{"name":"up regulation of hyperphosphorylation of RNA polymerase II C-terminal domain","type":"exact"},{"name":"up regulation of phosphorylation of RNA polymerase II C-terminal domain","type":"exact"},{"name":"up-regulation of CTD domain phosphorylation of RNA polymerase II","type":"exact"},{"name":"up-regulation of generation of II(0) form of RNA polymerase II","type":"exact"},{"name":"up-regulation of generation of hyperphosphorylated CTD of RNA polymerase II","type":"exact"},{"name":"up-regulation of hyperphosphorylation of RNA polymerase II C-terminal domain","type":"exact"},{"name":"up-regulation of phosphorylation of RNA polymerase II C-terminal domain","type":"exact"},{"name":"upregulation of CTD domain phosphorylation of RNA polymerase II","type":"exact"},{"name":"upregulation of generation of II(0) form of RNA polymerase II","type":"exact"},{"name":"upregulation of generation of hyperphosphorylated CTD of RNA polymerase II","type":"exact"},{"name":"upregulation of hyperphosphorylation of RNA polymerase II C-terminal domain","type":"exact"},{"name":"upregulation of phosphorylation of RNA polymerase II C-terminal domain","type":"exact"}],"termid":"GO:1901409"}


id: GO:0031816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P2Y6 nucleotide receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled nucleotide receptor binding","termid":"GO:0031811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"P2Y6 nucleotide receptor binding","synonyms":[{"name":"P2Y6 nucleotide receptor ligand","type":"narrow"}],"termid":"GO:0031816"}


id: PR:000050595
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A microtubule protein alp7 (Schizosaccharomyces pombe) that has been phosphorylated at positions equivalent to Ser-50, Ser-51, Thr-100, Thr-116, and Thr-131 of the amino acid sequence represented by UniProtKB:Q9URY2. Example: UniProtKB:Q9URY2, Ser-50/Ser-51, MOD:00046|Thr-100/Thr-116/Thr-131, MOD:00047.","definition_xrefs":["PRO:DAN","PomBase:MLR","PMID:24790093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule protein alp7 (Schizosaccharomyces pombe)","termid":"PR:000050514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alp7/Phos:(S50,S51,T100,T116,T131)","pombase_gene_id":"SPAC890.02c","synonyms":[{"name":"PomBase_original_PRO_term_name: microtubule protein alp7 phosphorylated 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-alp7/Phos:2","type":"exact"},{"name":"UniProtKB:Q9URY2, Ser-50/Ser-51, MOD:00046|Thr-100/Thr-116/Thr-131, MOD:00047","type":"narrow"},{"name":"alp7/Phos:(S50,S51,T100,T116,T131)","type":"exact"}],"termid":"PR:000050595"}


id: PBO:0083074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dinucleoside triphosphate hydrolase; has similarity to the tumor suppressor FHIT and belongs to the histidine triad (HIT) superfamily of nucleotide-binding proteins","termid":"PBO:0083074"}


id: PR:O94712
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gid1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1259.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.12c","synonyms":[{"name":"Spom972h-gid1","type":"exact"}],"termid":"PR:O94712"}


id: PBO:0031904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Tor1","termid":"PBO:0031904"}


id: GO:0042359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving vitamin D, any of a group of related, fat-soluble compounds that are derived from delta-5,7 steroids and play a central role in calcium metabolism. Specific forms of vitamin D include calciferol (ergocalciferol; vitamin D2) and cholecalciferol (calciol; vitamin D3).","definition_xrefs":["ISBN:0471331309","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fat-soluble vitamin metabolic process","termid":"GO:0006775"},{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"},{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629","GO:0006766"],"is_obsolete":false,"name":"vitamin D metabolic process","synonyms":[{"name":"calciferol metabolic process","type":"narrow"},{"name":"calciferol metabolism","type":"narrow"},{"name":"cholecalciferol metabolic process","type":"narrow"},{"name":"cholecalciferol metabolism","type":"narrow"},{"name":"ergocalciferol metabolic process","type":"narrow"},{"name":"ergocalciferol metabolism","type":"narrow"},{"name":"vitamin D metabolism","type":"exact"}],"termid":"GO:0042359"}


id: PBO:0031346
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_6-azauracil","termid":"PBO:0031346"}


id: PBO:0061993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily D member 2","termid":"PBO:0061993"}


id: PBO:0076974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transglutaminase 5","termid":"PBO:0076974"}


id: GO:0000423
data:
  {"annotated_genes":["SJAG_03435","SJAG_05017","SJAG_01876","SJAG_01251","SJAG_02414","SJAG_01283","SJAG_04219","SJAG_01073","SJAG_02699","SJAG_00645","SJAG_04502","SJAG_00079","SJAG_05261","SJAG_01135","SJAG_04232","SJAG_01382","SJAG_01274","SJAG_00059","SJAG_03100"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83903,85110,86033,87667,88674,88961,90689,91026,93938,95759,96040,99655,100878,106722,107754,109716,110603,111294,113887],"is_not":false,"summary":null,"term":"GO:0000423"}]},"cv_name":"biological_process","definition":"The selective autophagy process in which a mitochondrion is degraded by macroautophagy.","definition_xrefs":["PMID:15798367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagy of mitochondrion","termid":"GO:0000422"},{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00059":null,"SJAG_00079":null,"SJAG_00645":null,"SJAG_01073":null,"SJAG_01135":null,"SJAG_01251":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01382":null,"SJAG_01876":null,"SJAG_02414":null,"SJAG_02699":null,"SJAG_03100":null,"SJAG_03435":null,"SJAG_04219":null,"SJAG_04232":null,"SJAG_04502":null,"SJAG_05017":null,"SJAG_05261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0007005","GO:0044248","GO:0006914"],"is_obsolete":false,"name":"mitophagy","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Mitophagy"],"synonyms":[{"name":"macromitophagy","type":"exact"}],"termid":"GO:0000423","terms_by_termid":{"GO:0000423":null}}


id: PBO:0071094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 96","termid":"PBO:0071094"}


id: PBO:0024822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Puf3 (predicted)","termid":"PBO:0024822"}


id: FYPO:0002740
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell proceeds normally through a specific mitotic cell cycle phase. A mitotic cell cycle phase is any of the distinct periods or stages into which the mitotic cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events.","definition_xrefs":["GO:0022403","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle","termid":"FYPO:0000411"},{"relation_name":"is_a","term_name":"normal cell cycle phase","termid":"FYPO:0003833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic cell cycle phase","termid":"FYPO:0002740"}


id: GO:0071879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the adenylate cyclase-activating adrenergic receptor protein signaling pathway. An adrenergic receptor signaling pathway is the series of molecular signals generated as a consequence of an adrenergic receptor binding to one of its physiological ligands.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045745"},{"relation_name":"positively_regulates","term_name":"adrenergic receptor signaling pathway","termid":"GO:0071875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of adenylate cyclase-activating adrenergic receptor signaling pathway","synonyms":[{"name":"positive regulation of adrenergic receptor signaling pathway","type":"broad"},{"name":"positive regulation of adrenergic receptor signalling pathway","type":"exact"}],"termid":"GO:0071879"}


id: GO:0006550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of isoleucine, (2R*,3R*)-2-amino-3-methylpentanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoleucine metabolic process","termid":"GO:0006549"},{"relation_name":"is_a","term_name":"branched-chain amino acid catabolic process","termid":"GO:0009083"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248","GO:0006520"],"is_obsolete":false,"name":"isoleucine catabolic process","secondary_identifiers":["MetaCyc:ILEUDEG-PWY"],"synonyms":[{"name":"isoleucine breakdown","type":"exact"},{"name":"isoleucine catabolism","type":"exact"},{"name":"isoleucine degradation","type":"exact"}],"termid":"GO:0006550"}


id: PR:Q09686
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC13C5.04 gene.","definition_xrefs":["UniProtKB:Q09686","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine amidotransferase-like protein C13C5.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13C5.04","synonyms":[{"name":"Spom972h-SPAC13C5.04","type":"exact"}],"termid":"PR:Q09686"}


id: PBO:0079498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin like 1","termid":"PBO:0079498"}


id: PBO:0057527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 644a","termid":"PBO:0057527"}


id: GO:0045099
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A type of intermediate filament.","definition_xrefs":["ISBN:0716731363"],"gene_count":0,"genotype_count":0,"name":"obsolete vimentin (obsolete GO:0045099)","synonyms":[{"name":"vimentin","type":"exact"}],"termid":"GO:0045099"}


id: FYPO:0009037
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of phloxine B than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0002682","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"resistance to phloxine B","synonyms":[{"name":"resistance to phloxine B during mitotic cell cycle","type":"related"},{"name":"resistance to phloxine B during vegetative growth","type":"exact"},{"name":"resistant to phloxine B","type":"exact"}],"termid":"FYPO:0009037"}


id: PBO:0055637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3076","termid":"PBO:0055637"}


id: PBO:0041258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 putative open reading frame 220","termid":"PBO:0041258"}


id: GO:0035727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lysophosphatidic acid (LPA), a phospholipid derivative that acts as a potent mitogen due to its activation of high-affinity G protein-coupled receptors.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid binding","termid":"GO:0005543"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"lysophosphatidic acid binding","synonyms":[{"name":"LPA binding","type":"exact"}],"termid":"GO:0035727"}


id: PBO:0056482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrilin 4","termid":"PBO:0056482"}


id: PBO:0061666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 50","termid":"PBO:0061666"}


id: PBO:0109391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 20","termid":"PBO:0109391"}


id: GO:0018708
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a thiol = S-adenosyl-L-homocysteine + a thioether.","definition_xrefs":["EC:2.1.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"thiol S-methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-175976","RHEA:18277","MetaCyc:THIOL-S-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:thiol S-methyltransferase activity","type":"related"},{"name":"TMT","type":"related"},{"name":"thiol methyltransferase activity","type":"related"}],"termid":"GO:0018708"}


id: GO:0031259
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a uropod.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"is_a","term_name":"cell trailing edge membrane","termid":"GO:0031257"},{"relation_name":"part_of","term_name":"uropod","termid":"GO:0001931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"uropod membrane","synonyms":[{"name":"uropodium membrane","type":"exact"}],"termid":"GO:0031259"}


id: PBO:0065817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB4B, member RAS oncogene family","termid":"PBO:0065817"}


id: GO:0022011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuronal axons and dendrites become coated with a segmented lipid-rich sheath (myelin) to enable faster and more energetically efficient conduction of electrical impulses. The sheath is formed by the cell membranes of Schwann cells in the peripheral nervous system. Adjacent myelin segments are separated by a non-myelinated stretch of axon called a node of Ranvier.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:jid","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral nervous system axon ensheathment","termid":"GO:0032292"},{"relation_name":"is_a","term_name":"myelination","termid":"GO:0042552"},{"relation_name":"part_of","term_name":"Schwann cell development","termid":"GO:0014044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myelination in peripheral nervous system","synonyms":[{"name":"peripheral nervous system myelination","type":"exact"}],"termid":"GO:0022011"}


id: PBO:0055889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 8 VRAC subunit E","termid":"PBO:0055889"}


id: GO:0061107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the seminal vesicle over time, from its formation to the mature structure. The seminal vesicle is a gland that contributes to the production of semen.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"},{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seminal vesicle development","termid":"GO:0061107"}


id: PBO:0005897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Isoleucine, mitochondrial","termid":"PBO:0005897"}


id: GO:0110079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of placenta blood vessel development.","definition_xrefs":["GOC:BHF","GOC:rph","PMID:27748453","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vasculature development","termid":"GO:1901342"},{"relation_name":"regulates","term_name":"placenta blood vessel development","termid":"GO:0060674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of placenta blood vessel development","termid":"GO:0110079"}


id: PBO:0045750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epstein Barr virus modification site 1","termid":"PBO:0045750"}


id: PBO:0067881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 183","termid":"PBO:0067881"}


id: GO:0002897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of central B cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of central tolerance induction","termid":"GO:0002648"},{"relation_name":"is_a","term_name":"positive regulation of B cell tolerance induction","termid":"GO:0002663"},{"relation_name":"is_a","term_name":"regulation of central B cell tolerance induction","termid":"GO:0002895"},{"relation_name":"positively_regulates","term_name":"central B cell tolerance induction","termid":"GO:0002510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of central B cell tolerance induction","synonyms":[{"name":"activation of central B cell tolerance induction","type":"narrow"},{"name":"stimulation of central B cell tolerance induction","type":"narrow"},{"name":"up regulation of central B cell tolerance induction","type":"exact"},{"name":"up-regulation of central B cell tolerance induction","type":"exact"},{"name":"upregulation of central B cell tolerance induction","type":"exact"}],"termid":"GO:0002897"}


id: PBO:0087667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the inner ring of the nuclear pore complex (NPC); contributes to NPC assembly and tethering of DNA to the nuclear periphery; both Nup170p and NUP157p are similar to human Nup155p; NUP157 has a paralog, NUP170, that arose from the whole genome duplication","termid":"PBO:0087667"}


id: GO:0043275
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N-acetyl-L-Asp-L-Glu + H2O = N-acetyl-L-Asp + L-Glu.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate carboxypeptidase II activity (obsolete GO:0043275)","synonyms":[{"name":"N-acetylated alpha-linked acidic dipeptidase activity","type":"related"},{"name":"N-acetylated-alpha-linked-amino dipeptidase activity","type":"related"},{"name":"N-acetylated-gamma-linked-acidic dipeptidase (NAALADase)","type":"related"},{"name":"N-acetylated-gamma-linked-acidic dipeptidase activity","type":"related"},{"name":"NAALA dipeptidase activity","type":"related"},{"name":"NAALADase activity","type":"related"},{"name":"PSM antigen","type":"related"},{"name":"PSMA","type":"related"},{"name":"acetylaspartylglutamate dipeptidase activity","type":"exact"},{"name":"folate hydrolase activity","type":"related"},{"name":"folylpolyglutamate hydrolase activity","type":"related"},{"name":"glutamate carboxypeptidase II activity","type":"exact"},{"name":"mGCP","type":"related"},{"name":"membrane glutamate carboxypeptidase","type":"narrow"},{"name":"microsomal gamma-glutamyl carboxypeptidase","type":"narrow"},{"name":"prostate-specific membrane antigen","type":"related"},{"name":"prostrate-specific membrane antigen","type":"related"},{"name":"pteroylpoly-gamma-glutamate carboxypeptidase activity","type":"related"},{"name":"pteroylpoly-gamma-glutamate hydrolase activity","type":"related"},{"name":"pteroylpolygammaglutamyl hydrolase activity","type":"related"},{"name":"pteroylpolyglutamate hydrolase activity","type":"related"},{"name":"pteroylpolyglutamic acid hydrolase activity","type":"related"},{"name":"rat NAAG peptidase","type":"narrow"}],"termid":"GO:0043275"}


id: PBO:0071688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 20","termid":"PBO:0071688"}


id: PBO:0068952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 196, pseudogene","termid":"PBO:0068952"}


id: PATO:0001150
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001150 absolute susceptibility value (obsolete PATO:0001150)","termid":"PATO:0001150"}


id: PBO:0084688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial copper and phosphate carrier; imports copper and inorganic phosphate into mitochondria; functionally redundant with Mir1p but less abundant than Mir1p under normal conditions; expression is induced at high temperature","termid":"PBO:0084688"}


id: GO:0051477
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a mannosylglycerate from one side of a membrane to the other.","definition_xrefs":["PMID:15034926","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"mannosylglycerate transmembrane transporter activity","termid":"GO:0051477"}


id: GO:0048654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the anther are generated and organized.","definition_xrefs":["GOC:jid","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ morphogenesis","termid":"GO:0048444"},{"relation_name":"part_of","term_name":"stamen morphogenesis","termid":"GO:0048448"},{"relation_name":"part_of","term_name":"anther development","termid":"GO:0048653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anther morphogenesis","termid":"GO:0048654"}


id: PBO:0052183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNK15 and WISP2 antisense RNA 1","termid":"PBO:0052183"}


id: PBO:0017587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFS myo-inositol transmembrane transporter","termid":"PBO:0017587"}


id: PBO:0038942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase 6 (class V)","termid":"PBO:0038942"}


id: PBO:0072763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A14","termid":"PBO:0072763"}


id: PBO:0054267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1653","termid":"PBO:0054267"}


id: GO:1903285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hydrogen peroxide catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:bf","GO_REF:0000058","PMID:23507046","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrogen peroxide metabolic process","termid":"GO:0010726"},{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide catabolic process","termid":"GO:2000295"},{"relation_name":"positively_regulates","term_name":"hydrogen peroxide catabolic process","termid":"GO:0042744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"positively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"positive regulation of hydrogen peroxide catabolic process","synonyms":[{"name":"activation of H2O2 catabolic process","type":"narrow"},{"name":"activation of H2O2 scavenging","type":"related"},{"name":"activation of detoxification of H2O2","type":"related"},{"name":"activation of detoxification of hydrogen peroxide","type":"related"},{"name":"activation of hydrogen peroxide breakdown","type":"narrow"},{"name":"activation of hydrogen peroxide catabolic process","type":"narrow"},{"name":"activation of hydrogen peroxide catabolism","type":"narrow"},{"name":"activation of hydrogen peroxide degradation","type":"narrow"},{"name":"activation of hydrogen peroxide removal","type":"related"},{"name":"activation of hydrogen peroxide scavenging","type":"related"},{"name":"positive regulation of H2O2 catabolic process","type":"exact"},{"name":"positive regulation of H2O2 scavenging","type":"related"},{"name":"positive regulation of detoxification of H2O2","type":"related"},{"name":"positive regulation of detoxification of hydrogen peroxide","type":"related"},{"name":"positive regulation of hydrogen peroxide breakdown","type":"exact"},{"name":"positive regulation of hydrogen peroxide catabolism","type":"exact"},{"name":"positive regulation of hydrogen peroxide degradation","type":"exact"},{"name":"positive regulation of hydrogen peroxide removal","type":"related"},{"name":"positive regulation of hydrogen peroxide scavenging","type":"related"},{"name":"up regulation of H2O2 catabolic process","type":"exact"},{"name":"up regulation of H2O2 scavenging","type":"related"},{"name":"up regulation of detoxification of H2O2","type":"related"},{"name":"up regulation of detoxification of hydrogen peroxide","type":"related"},{"name":"up regulation of hydrogen peroxide breakdown","type":"exact"},{"name":"up regulation of hydrogen peroxide catabolic process","type":"exact"},{"name":"up regulation of hydrogen peroxide catabolism","type":"exact"},{"name":"up regulation of hydrogen peroxide degradation","type":"exact"},{"name":"up regulation of hydrogen peroxide removal","type":"related"},{"name":"up regulation of hydrogen peroxide scavenging","type":"related"},{"name":"up-regulation of H2O2 catabolic process","type":"exact"},{"name":"up-regulation of H2O2 scavenging","type":"related"},{"name":"up-regulation of detoxification of H2O2","type":"related"},{"name":"up-regulation of detoxification of hydrogen peroxide","type":"related"},{"name":"up-regulation of hydrogen peroxide breakdown","type":"exact"},{"name":"up-regulation of hydrogen peroxide catabolic process","type":"exact"},{"name":"up-regulation of hydrogen peroxide catabolism","type":"exact"},{"name":"up-regulation of hydrogen peroxide degradation","type":"exact"},{"name":"up-regulation of hydrogen peroxide removal","type":"related"},{"name":"up-regulation of hydrogen peroxide scavenging","type":"related"},{"name":"upregulation of H2O2 catabolic process","type":"exact"},{"name":"upregulation of H2O2 scavenging","type":"related"},{"name":"upregulation of detoxification of H2O2","type":"related"},{"name":"upregulation of detoxification of hydrogen peroxide","type":"related"},{"name":"upregulation of hydrogen peroxide breakdown","type":"exact"},{"name":"upregulation of hydrogen peroxide catabolic process","type":"exact"},{"name":"upregulation of hydrogen peroxide catabolism","type":"exact"},{"name":"upregulation of hydrogen peroxide degradation","type":"exact"},{"name":"upregulation of hydrogen peroxide removal","type":"related"},{"name":"upregulation of hydrogen peroxide scavenging","type":"related"}],"termid":"GO:1903285"}


id: PBO:0017627
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not a DNA polymerase delta subunit as initially detected in PMID:9326594","termid":"PBO:0017627"}


id: PBO:0072694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUNX3 antisense RNA 1","termid":"PBO:0072694"}


id: GO:1902928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of inulin.","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","PMID:23104410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructan biosynthetic process","termid":"GO:0010146"},{"relation_name":"is_a","term_name":"inulin metabolic process","termid":"GO:1902926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"inulin biosynthetic process","synonyms":[{"name":"inulin anabolism","type":"exact"},{"name":"inulin biosynthesis","type":"exact"},{"name":"inulin formation","type":"exact"},{"name":"inulin synthesis","type":"exact"}],"termid":"GO:1902928"}


id: GO:0042711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Female behaviors associated with the care and rearing of offspring.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parental behavior","termid":"GO:0060746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maternal behavior","synonyms":[{"name":"maternal behaviour","type":"exact"}],"termid":"GO:0042711"}


id: PBO:0043014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHKB-CPT1B readthrough (NMD candidate)","termid":"PBO:0043014"}


id: GO:1901542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ent-pimara-8(14),15-diene biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"regulates","term_name":"ent-pimara-8(14),15-diene biosynthetic process","termid":"GO:1901541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of ent-pimara-8(14),15-diene biosynthetic process","synonyms":[{"name":"regulation of ent-pimara-8(14),15-diene anabolism","type":"exact"},{"name":"regulation of ent-pimara-8(14),15-diene biosynthesis","type":"exact"},{"name":"regulation of ent-pimara-8(14),15-diene formation","type":"exact"},{"name":"regulation of ent-pimara-8(14),15-diene synthesis","type":"exact"}],"termid":"GO:1901542"}


id: PBO:0089640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox14","termid":"PBO:0089640"}


id: FYPO:0004496
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is smaller than normal and contains more than one septum, when the cell is in a culture in stationary phase.","definition_xrefs":["PMID:8292390","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell","termid":"FYPO:0000023"},{"relation_name":"is_a","term_name":"multiseptate cell","termid":"FYPO:0004295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000005","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"small multiseptate cell during stationary phase","termid":"FYPO:0004496"}


id: PBO:0050203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 20","termid":"PBO:0050203"}


id: GO:0070597
data:
  {"annotated_genes":["SJAG_04666","SJAG_01028","SJAG_00424","SJAG_04184","SJAG_02278","SJAG_03057","SJAG_04236","SJAG_02916","SJAG_00610"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110448,113863,105128,85209,100236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[85504,88473,90995,98913],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds, found in the walls of cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide metabolic process","termid":"GO:0010383"},{"relation_name":"is_a","term_name":"(1->3)-alpha-glucan metabolic process","termid":"GO:0070595"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01028":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cell wall (1->3)-alpha-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell wall 1,3-alpha-glucan metabolic process","type":"exact"},{"name":"cell wall 1,3-alpha-glucan metabolism","type":"exact"},{"name":"cell wall alpha-1,3 glucan metabolic process","type":"exact"},{"name":"cell wall alpha-1,3 glucan metabolism","type":"exact"}],"termid":"GO:0070597","terms_by_termid":{"GO:0070600":null,"GO:0070610":null}}


id: GO:0044170
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The irregular network of unit membranes, visible only by electron microscopy, that occurs in the host cell cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The host smooth ER has no ribosomes adhering to the outer surface.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell endoplasmic reticulum","termid":"GO:0044165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell smooth endoplasmic reticulum","synonyms":[{"name":"host smooth endoplasmic reticulum","type":"exact"}],"termid":"GO:0044170"}


id: PR:Q9UTI4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- moa1 gene.","definition_xrefs":["UniProtKB:Q9UTI4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monopolar attachment protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.07c","synonyms":[{"name":"Spom972h-moa1","type":"exact"},{"name":"meiotically up-regulated gene 159 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTI4"}


id: SO:1000078
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variation that decreases the rate a which transcription of the sequence occurs.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000078 sequence_variant_decreasing_rate_of_transcription (obsolete SO:1000078)","synonyms":[{"name":"mutation decreasing rate of transcription","type":"related"},{"name":"sequence variation decreasing rate of transcription","type":"exact"}],"termid":"SO:1000078"}


id: PBO:0059509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded conserved sequence block II","termid":"PBO:0059509"}


id: FYPO:0003275
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to nitrite ions. Cells stop growing (and may die) at a concentration of nitrite ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to nitrite","synonyms":[{"name":"hypersensitive to nitrite","type":"exact"},{"name":"sensitive to nitrite during mitotic cell cycle","type":"related"},{"name":"sensitive to nitrite during vegetative growth","type":"exact"},{"name":"sensitive to nitrite ions","type":"exact"}],"termid":"FYPO:0003275"}


id: GO:0102051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetate + L-tryptophan + ATP(4-) = H+ + indole-3-acetyl-tryptophan + AMP(2-) + diphosphoric acid.","definition_xrefs":["EC:6.3.-.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"indole-3-acetyl-tryptophan synthetase activity","secondary_identifiers":["MetaCyc:RXN-10433"],"termid":"GO:0102051"}


id: GO:1902060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sporocarp development involved in sexual reproduction.","definition_xrefs":["GOC:TermGenie","GOC:di","PMID:23480775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of sporocarp development involved in sexual reproduction","termid":"GO:1902058"},{"relation_name":"positively_regulates","term_name":"sporocarp development involved in sexual reproduction","termid":"GO:0000909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sporocarp development involved in sexual reproduction","synonyms":[{"name":"activation of ascus development","type":"narrow"},{"name":"activation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"activation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"activation of perfect stage fruiting body development","type":"narrow"},{"name":"activation of sporocarp development involved in sexual reproduction","type":"narrow"},{"name":"positive regulation of ascus development","type":"narrow"},{"name":"positive regulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"positive regulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"positive regulation of perfect stage fruiting body development","type":"narrow"},{"name":"up regulation of ascus development","type":"narrow"},{"name":"up regulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"up regulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"up regulation of perfect stage fruiting body development","type":"narrow"},{"name":"up regulation of sporocarp development involved in sexual reproduction","type":"exact"},{"name":"up-regulation of ascus development","type":"narrow"},{"name":"up-regulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"up-regulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"up-regulation of perfect stage fruiting body development","type":"narrow"},{"name":"up-regulation of sporocarp development involved in sexual reproduction","type":"exact"},{"name":"upregulation of ascus development","type":"narrow"},{"name":"upregulation of fruiting body development involved in sexual reproduction","type":"broad"},{"name":"upregulation of fruiting body formation involved in sexual reproduction","type":"broad"},{"name":"upregulation of perfect stage fruiting body development","type":"narrow"},{"name":"upregulation of sporocarp development involved in sexual reproduction","type":"exact"}],"termid":"GO:1902060"}


id: GO:0051200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving a prosthetic group.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of prosthetic group metabolic process (obsolete GO:0051200)","synonyms":[{"name":"activation of prosthetic group metabolic process","type":"narrow"},{"name":"positive regulation of coenzyme and prosthetic group metabolic process","type":"broad"},{"name":"positive regulation of coenzyme and prosthetic group metabolism","type":"broad"},{"name":"positive regulation of prosthetic group metabolism","type":"exact"},{"name":"stimulation of prosthetic group metabolic process","type":"narrow"},{"name":"up regulation of prosthetic group metabolic process","type":"exact"},{"name":"up-regulation of prosthetic group metabolic process","type":"exact"},{"name":"upregulation of prosthetic group metabolic process","type":"exact"}],"termid":"GO:0051200"}


id: FYPO:0005945
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which chromosomal truncation that would result in the loss of one of two different alleles of a gene occurs at a normal (i.e. indistinguishable from wild type) frequency.","definition_xrefs":["PomBase:mah","PMID:19798055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal frequency of break-induced loss of heterozygosity","termid":"FYPO:0005945"}


id: PBO:0041998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 47","termid":"PBO:0041998"}


id: GO:0003217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a cardiac right atrium from unspecified parts.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac atrium formation","termid":"GO:0003210"},{"relation_name":"part_of","term_name":"cardiac right atrium morphogenesis","termid":"GO:0003213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac right atrium formation","termid":"GO:0003217"}


id: PBO:0080547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 6","termid":"PBO:0080547"}


id: RO:0002443
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship between two organisms living together in more or less intimate association in a relationship in which association is disadvantageous or destructive to one of the organisms (GO).","direct_ancestors":[{"relation_name":"is_a","term_name":"symbiotically_interacts_with","termid":"RO:0002440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interacts_with_via_parasite-host_interaction","termid":"RO:0002443"}


id: PR:Q09127
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1001 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L10-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.04","synonyms":[{"name":"QM protein homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SpQM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpl1001","type":"exact"}],"termid":"PR:Q09127"}


id: GO:0030023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A component of the extracellular matrix that enables the matrix to recoil after transient stretching.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix structural constituent","termid":"GO:0005201"},{"relation_name":"is_a","term_name":"structural molecule activity conferring elasticity","termid":"GO:0097493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"extracellular matrix constituent conferring elasticity","synonyms":[{"name":"core extracellular matrix","type":"broad"},{"name":"core matrisome","type":"broad"},{"name":"elastin","type":"related"}],"termid":"GO:0030023"}


id: PR:O14251
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trs120 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport protein particle subunit trs120 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G10.05c","synonyms":[{"name":"Spom972h-trs120","type":"exact"},{"name":"TRAPP subunit trs120 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14251"}


id: PBO:0061818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 8 Y-linked","termid":"PBO:0061818"}


id: PBO:0016076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Hal4","termid":"PBO:0016076"}


id: PBO:0074902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 74B","termid":"PBO:0074902"}


id: PR:Q09925
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine palmitoyltransferase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01765","PRO:DNx","PANTHER:PTHR13693:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC21E11.08","secondary_identifiers":["UniProtKB:Q09925"],"synonyms":[{"name":"SPT 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPTLC2","type":"exact"},{"name":"long chain base biosynthesis protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09925"}


id: PBO:0042373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD200 receptor 1","termid":"PBO:0042373"}


id: GO:0071678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a neuron in the olfactory bulb is directed to its target in the brain in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory bulb axon guidance","synonyms":[{"name":"olfactory bulb axon pathfinding","type":"exact"}],"termid":"GO:0071678"}


id: GO:0036129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a hydrogen peroxide (H2O2) stimulus.","definition_xrefs":["GOC:al"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to hydrogen peroxide (obsolete GO:0036129)","termid":"GO:0036129"}


id: PBO:0088998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Armadillo-type fold protein, human IFRD1 ortholog, implicated in transcription or signaling","termid":"PBO:0088998"}


id: GO:0046483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings).","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete heterocycle metabolic process (obsolete GO:0046483)","termid":"GO:0046483"}


id: PBO:0083580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; substantially overlaps YMR295C; deletion causes sensitivity to unfolded protein response-inducing agents","termid":"PBO:0083580"}


id: FYPO:0006645
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle midzone during metaphase is normal (i.e. indistinguishable from wild type). The mitotic spindle midzone is the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["GO:1990023","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle midzone","termid":"FYPO:0004692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to mitotic spindle midzone during metaphase","synonyms":[{"name":"normal protein localisation to mitotic spindle midzone during metaphase","type":"exact"},{"name":"normal protein localization to mitotic spindle midzone during metaphase during vegetative growth","type":"exact"},{"name":"normal protein localization to spindle midzone during metaphase during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0006645"}


id: GO:0030532
data:
  {"annotated_genes":["SJAG_01440","SJAG_00531","SJAG_00058","SJAG_03547","SJAG_03469","SJAG_02469","SJAG_01015","SJAG_02279","SJAG_00539","SJAG_00147","SJAG_02843","SJAG_04911","SJAG_00322","SJAG_03410","SJAG_03995","SJAG_02377","SJAG_03214","SJAG_01452","SJAG_04214","SJAG_01008","SJAG_00989","SJAG_01654","SJAG_00498","SJAG_00504","SJAG_03460","SJAG_00414","SJAG_05235","SJAG_03954","SJAG_03070","SJAG_01308","SJAG_03245","SJAG_04497","SJAG_02455","SJAG_04079","SJAG_01819","SJAG_03983","SJAG_02681","SJAG_03369","SJAG_05009","SJAG_01327","SJAG_02304","SJAG_00643","SJAG_04163","SJAG_04529","SJAG_01547","SJAG_04538","SJAG_02185","SJAG_02295","SJAG_04433","SJAG_00278","SJAG_04230","SJAG_04405","SJAG_04318","SJAG_04222","SJAG_00474","SJAG_01301","SJAG_01870","SJAG_05240","SJAG_05208","SJAG_03210","SJAG_02372","SJAG_01634","SJAG_00313","SJAG_00577"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87732,89749,107406],"is_not":false,"summary":null,"term":"GO:0030532"},{"annotations":[93895,106701,109343,98772,91662,106682,111315,101916,102991,87610,108427,90978,106115,106712,98605,91237,90060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005685"},{"annotations":[99266,91884,102809,90979,108715,92395,112481,102483,101917,90226,89096,102388,108509,105551,111000,108946,98707,91663,106116,89424,98606,111936,98477,97797,104587,101563,106683,103939,91395,91238],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005686"},{"annotations":[90981,91240,98608,101919,106685,98249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005687"},{"annotations":[102389,101920,111937,91241,91885,94075,110426,107194,106686,85598,101878,98250,102590,89368,107768,111277,111001,108947,112483,90982,98609,94846,89160,96689,89001,91665,104588,106117,110926,91608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046540"},{"annotations":[106687,111002,104589,101921,96690,111938,102591,110427,113902,98610,102390,112484,108310,90983,91242,98768,91886,93468,106118,108948,111278,94076,91666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005682"},{"annotations":[91887,111939,102391,112485,101538,108949,111003,104590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005688"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains at least one RNA of the small nuclear RNA (snRNA) class and as well as its associated proteins. These are typically named after the snRNA(s) they contain, e.g. U1 snRNP, U4/U6 snRNP, or 7SK snRNP. Many, of these complexes become part of the spliceosome involved in splicing of nuclear mRNAs. Others are involved in regulation of transcription elongation or 3'-end processing of replication-dependent histone pre-mRNAs.","definition_xrefs":["GOC:krc","GOC:mah","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sm-like protein family complex","termid":"GO:0120114"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"}],"gene_count":64,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_00278":null,"SJAG_00313":null,"SJAG_00322":null,"SJAG_00414":null,"SJAG_00474":null,"SJAG_00498":null,"SJAG_00504":null,"SJAG_00531":null,"SJAG_00539":null,"SJAG_00577":null,"SJAG_00643":null,"SJAG_00989":null,"SJAG_01008":null,"SJAG_01015":null,"SJAG_01301":null,"SJAG_01308":null,"SJAG_01327":null,"SJAG_01440":null,"SJAG_01452":null,"SJAG_01547":null,"SJAG_01634":null,"SJAG_01654":null,"SJAG_01819":null,"SJAG_01870":null,"SJAG_02185":null,"SJAG_02279":null,"SJAG_02295":null,"SJAG_02304":null,"SJAG_02372":null,"SJAG_02377":null,"SJAG_02455":null,"SJAG_02469":null,"SJAG_02681":null,"SJAG_02843":null,"SJAG_03070":null,"SJAG_03210":null,"SJAG_03214":null,"SJAG_03245":null,"SJAG_03369":null,"SJAG_03410":null,"SJAG_03460":null,"SJAG_03469":null,"SJAG_03547":null,"SJAG_03954":null,"SJAG_03983":null,"SJAG_03995":null,"SJAG_04079":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04222":null,"SJAG_04230":null,"SJAG_04318":null,"SJAG_04405":null,"SJAG_04433":null,"SJAG_04497":null,"SJAG_04529":null,"SJAG_04538":null,"SJAG_04911":null,"SJAG_05009":null,"SJAG_05208":null,"SJAG_05235":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"small nuclear ribonucleoprotein complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:SnRNP"],"synonyms":[{"name":"small nuclear ribonucleoprotein","type":"exact"},{"name":"snRNP","type":"exact"}],"termid":"GO:0030532","terms_by_termid":{"GO:0005682":null,"GO:0005685":null,"GO:0005686":null,"GO:0005687":null,"GO:0005688":null,"GO:0030532":null,"GO:0046540":null}}


id: GO:0032498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a muramyl dipeptide stimulus is received by a cell and converted into a molecular signal. Muramyl dipeptide is derived from peptidoglycan.","definition_xrefs":["PMID:15998797","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to muramyl dipeptide","termid":"GO:0032495"},{"relation_name":"is_a","term_name":"detection of peptidoglycan","termid":"GO:0032499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of muramyl dipeptide","termid":"GO:0032498"}


id: PBO:0065405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha 6 pseudogene 1","termid":"PBO:0065405"}


id: SO:0000925
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to insert a GU dinucleotide.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000925 insert_GU (obsolete SO:0000925)","synonyms":[{"name":"insert GU","type":"exact"}],"termid":"SO:0000925"}


id: PBO:0073382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET binding protein 1","termid":"PBO:0073382"}


id: PBO:0000472
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis specific Coiled-coil Protein","termid":"PBO:0000472"}


id: PR:Q09835
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gos1 gene.","definition_xrefs":["UniProtKB:Q09835","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein gos1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.10","synonyms":[{"name":"Golgi SNAP receptor complex member 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Golgi SNARE protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gos1","type":"exact"}],"termid":"PR:Q09835"}


id: PBO:0016989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG1 family mitochondrial ATPase Afg1 (predicted)","termid":"PBO:0016989"}


id: PR:Q9P7M9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rib1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7M9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.09c","synonyms":[{"name":"GTP cyclohydrolase II (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rib1","type":"exact"}],"termid":"PR:Q9P7M9"}


id: GO:0000011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The distribution of vacuoles into daughter cells after mitosis or meiosis, mediated by interactions between vacuoles and the cytoskeleton.","definition_xrefs":["PMID:10873824","PMID:14616069","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole organization","termid":"GO:0007033"},{"relation_name":"is_a","term_name":"organelle inheritance","termid":"GO:0048308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vacuole inheritance","termid":"GO:0000011"}


id: PBO:0053060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LASP1 neighbor","termid":"PBO:0053060"}


id: PBO:0056385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 15","termid":"PBO:0056385"}


id: PBO:0062977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein nuclear 1","termid":"PBO:0062977"}


id: GO:0048312
data:
  {"annotated_genes":["SJAG_00655","SJAG_02384","SJAG_04003","SJAG_01741","SJAG_02848"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96017,98828,103266,103479,106929],"is_not":false,"summary":null,"term":"GO:0048312"}]},"cv_name":"biological_process","definition":"Any process that establishes the spatial arrangement of mitochondria within the cell.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion distribution","termid":"GO:0048311"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00655":null,"SJAG_01741":null,"SJAG_02384":null,"SJAG_02848":null,"SJAG_04003":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007005","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"intracellular distribution of mitochondria","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondria positioning within cell","type":"exact"},{"name":"mitochondrion positioning within cell","type":"exact"}],"termid":"GO:0048312","terms_by_termid":{"GO:0048312":null}}


id: MOD:00730
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"a protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a arabinose sugar group through a glycosidic bond","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosylated residue","termid":"MOD:00729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"arabinosylated","synonyms":[{"name":"Ara","type":"exact"}],"termid":"MOD:00730"}


id: GO:0034160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 8 signaling pathway.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 8 signaling pathway","termid":"GO:0034159"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 8 signaling pathway","termid":"GO:0034158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 8 signaling pathway","synonyms":[{"name":"negative regulation of TLR8 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 8 signalling pathway","type":"exact"}],"termid":"GO:0034160"}


id: PR:Q9UTS0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- psp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTS0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subtilase-type proteinase psp3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.01","synonyms":[{"name":"Spom972h-psp3","type":"exact"}],"termid":"PR:Q9UTS0"}


id: PBO:0082110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetohydroxyacid reductoisomerase and mtDNA binding protein; involved in branched-chain amino acid biosynthesis and maintenance of wild-type mitochondrial DNA; found in mitochondrial nucleoids","termid":"PBO:0082110"}


id: PBO:0043434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornichon family AMPA receptor auxiliary protein 4","termid":"PBO:0043434"}


id: FYPO:0003790
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein in a cell is normal (i.e. indistinguishable from wild type) during the first or second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiotic cell cycle","termid":"FYPO:0004095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization during meiosis","synonyms":[{"name":"normal protein localisation during meiosis","type":"exact"},{"name":"normal protein localization during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003790"}


id: PBO:0045994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EP300 interacting inhibitor of differentiation 2","termid":"PBO:0045994"}


id: GO:0051002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the joining of a metal ion to a molecule via a nitrogen-metal bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["EC:6.6.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity","termid":"GO:0016874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"ligase activity, forming nitrogen-metal bonds","termid":"GO:0051002"}


id: GO:0050987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient sulfation of peptidyl-serine to form O-sulfo-L-serine.","definition_xrefs":["RESID:AA0361"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via O-sulfo-L-serine (obsolete GO:0050987)","termid":"GO:0050987"}


id: SO:0001699
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primer with one or more mismatches to the DNA template corresponding to a position within a restriction enzyme recognition site.","direct_ancestors":[{"relation_name":"is_a","term_name":"primer","termid":"SO:0000112"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dCAPS_primer","synonyms":[{"name":"dCAPS primer","type":"exact"},{"name":"derived cleaved amplified polymorphic primer","type":"exact"}],"termid":"SO:0001699"}


id: PBO:0056379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 10","termid":"PBO:0056379"}


id: GO:0050612
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A + arsenite + H2O = AH(2) + arsenate + 2 H+.","definition_xrefs":["RHEA:18449","EC:1.20.99.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on phosphorus or arsenic in donors","termid":"GO:0030613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"arsenate reductase (donor) activity","secondary_identifiers":["KEGG_REACTION:R05752","MetaCyc:1.20.99.1-RXN"],"synonyms":[{"name":"arsenate:(acceptor) oxidoreductase activity","type":"related"},{"name":"arsenate:acceptor oxidoreductase activity","type":"related"}],"termid":"GO:0050612"}


id: PBO:0057999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3923","termid":"PBO:0057999"}


id: PBO:0071373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 32","termid":"PBO:0071373"}


id: PBO:0042642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 17 pseudogene","termid":"PBO:0042642"}


id: GO:0006692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving prostanoids, any compound based on or derived from the prostanoate structure.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid metabolic process","termid":"GO:0006690"},{"relation_name":"is_a","term_name":"unsaturated fatty acid metabolic process","termid":"GO:0033559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"prostanoid metabolic process","synonyms":[{"name":"prostanoid metabolism","type":"exact"}],"termid":"GO:0006692"}


id: PBO:0062129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily D member 9","termid":"PBO:0062129"}


id: PBO:0014299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe sprecific protein","termid":"PBO:0014299"}


id: PBO:0088779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery NADPH-dependent diflavin oxidoreductase Tah18","termid":"PBO:0088779"}


id: PBO:0071324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a pseudogene 8","termid":"PBO:0071324"}


id: FYPO:0008153
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at the silent mating-type cassette is abolished.","direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to heterochromatin during vegetative growth","termid":"FYPO:0001132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to heterochromatin at  silent mating-type cassette during vegetative growth","synonyms":[{"name":"abolished protein localization to mating-type locus heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0008153"}


id: PBO:0040050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPC1B pseudogene 1","termid":"PBO:0040050"}


id: PBO:0052383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 24","termid":"PBO:0052383"}


id: PBO:0030480
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_aspartate_level","termid":"PBO:0030480"}


id: PBO:0068555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 6, pseudogene","termid":"PBO:0068555"}


id: PBO:0073773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 7","termid":"PBO:0073773"}


