# terms

id: PBO:0067294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 379, pseudogene","termid":"PBO:0067294"}


id: PBO:0030905
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_vegetative_growth","termid":"PBO:0030905"}


id: GO:1905742
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of Ras guanyl-nucleotide exchange factor activity.","definition_xrefs":["GOC:TermGenie","PMID:20493808","GOC:rjd","GO_REF:0000088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Ras guanyl-nucleotide exchange factor complex","termid":"GO:1905742"}


id: GO:0019509
data:
  {"annotated_genes":["SJAG_01404","SJAG_02689","SJAG_02293","SJAG_03614","SJAG_00309","SJAG_03881"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85841,88704,95074,96716,103058,108491],"is_not":false,"summary":null,"term":"GO:0019509"}]},"cv_name":"biological_process","definition":"The generation of L-methionine (2-amino-4-(methylthio)butanoic acid) from methylthioadenosine.","definition_xrefs":["GOC:jl","MetaCyc:PWY-4361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine salvage","termid":"GO:0071267"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00309":null,"SJAG_01404":null,"SJAG_02293":null,"SJAG_02689":null,"SJAG_03614":null,"SJAG_03881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520","GO:0006790"],"is_obsolete":false,"name":"L-methionine salvage from methylthioadenosine","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"methionine recycling","type":"narrow"},{"name":"methionine regeneration","type":"narrow"},{"name":"methionine salvage from methylthioadenosine","type":"exact"},{"name":"methionine salvage pathway","type":"exact"}],"termid":"GO:0019509","terms_by_termid":{"GO:0019509":null}}


id: PBO:0113044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromatin-associated negative regulator of RNA polymerase III assembly; differentially and dynamically occupies RNA polymerase III-transcribed genes; promotes eviction of RNAPIII; occupancy depends on TFIIIB and TFIIIC, not RNAPIII; protein abundance increases in response to DNA replication stress","termid":"PBO:0113044"}


id: GO:0044510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant positive regulation of signal transduction in the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:8405712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of signal transduction in another organism","termid":"GO:0044509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in positive regulation of signal transduction in another organism","synonyms":[{"name":"envenomation resulting in positive regulation of signal transduction in other organism","type":"exact"}],"termid":"GO:0044510"}


id: PBO:0067144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 192, pseudogene","termid":"PBO:0067144"}


id: PBO:0044167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen triple helix repeat containing 1 pseudogene 1","termid":"PBO:0044167"}


id: PBO:0013130
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PseudoUridine Synthase","termid":"PBO:0013130"}


id: PBO:0055038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2453","termid":"PBO:0055038"}


id: PBO:0031228
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mRNA_export_from_nucleus","termid":"PBO:0031228"}


id: GO:0036011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Division of an imaginal disc-derived leg into a series of semi-repetitive parts or segments. The Drosophila leg, for example, has nine segments, each separated from the next by a flexible joint.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"appendage segmentation","termid":"GO:0035285"},{"relation_name":"part_of","term_name":"imaginal disc-derived leg morphogenesis","termid":"GO:0007480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived leg segmentation","termid":"GO:0036011"}


id: PBO:0055144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2563","termid":"PBO:0055144"}


id: PR:G2TRS0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1685.17 gene.","definition_xrefs":["UniProtKB:G2TRS0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1685.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.17","synonyms":[{"name":"Spom972h-SPBC1685.17","type":"exact"}],"termid":"PR:G2TRS0"}


id: PBO:0053236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHFPL tetraspan subfamily member 2","termid":"PBO:0053236"}


id: PBO:0085859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; YLR108C is not an esssential gene; protein abundance increases in response to DNA replication stress; YLR108C has a paralog, YDR132C, that arose from the whole genome duplication","termid":"PBO:0085859"}


id: PBO:0068814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 52, pseudogene","termid":"PBO:0068814"}


id: PBO:0062491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily B member 7 pseudogene","termid":"PBO:0062491"}


id: PBO:0049080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 135","termid":"PBO:0049080"}


id: PBO:0045550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 5","termid":"PBO:0045550"}


id: FYPO:0003791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of reciprocal meiotic recombination is increased at the silent mating-type cassettes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased meiotic recombination","termid":"FYPO:0000487"},{"relation_name":"is_a","term_name":"abnormal meiotic recombination at silent mating-type cassette","termid":"FYPO:0003346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0000293","FYPO:0005447"],"is_obsolete":false,"name":"increased meiotic recombination at silent mating-type cassette","synonyms":[{"name":"increased meiotic recombination at mating-type region heterochromatin","type":"exact"}],"termid":"FYPO:0003791"}


id: PBO:0004385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, Iqw1","termid":"PBO:0004385"}


id: PBO:0034225
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_phenotype","termid":"PBO:0034225"}


id: PBO:0041903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBFA2/RUNX1 partner transcriptional co-repressor 3","termid":"PBO:0041903"}


id: GO:0102160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + UDP-alpha-D-glucuronate = H+ + cyanidin 3-O-beta-(2-O-beta-D-glucuronosyl)-beta-D-glucoside + UDP.","definition_xrefs":["RHEA:28258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"cyanidin 3-O-glucoside 2-O-glucuronosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11756","EC:2.4.1.254"],"synonyms":[{"name":"cyanidin-3-O-glucoside 2-O-glucuronosyltransferase activity","type":"exact"}],"termid":"GO:0102160"}


id: SO:0000513
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration including more than one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_gene_cluster","termid":"SO:0000482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"J_cluster","synonyms":[{"name":"J cluster","type":"exact"},{"name":"J-CLUSTER","type":"exact"}],"termid":"SO:0000513"}


id: GO:0001839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the neural plate are generated and organized. The neural plate is a specialized region of columnar epithelial cells in the dorsal ectoderm that will give rise to nervous system tissue.","definition_xrefs":["ISBN:0878932437","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"part_of","term_name":"neural plate development","termid":"GO:0001840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural plate morphogenesis","termid":"GO:0001839"}


id: MOD:01297
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to 5x(13)C labeled L-proline.","definition_xrefs":["PubMed:12716131","Unimod:772#P"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"},{"relation_name":"is_a","term_name":"5x(13)C-labeled residue","termid":"MOD:01832"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5x(13)C labeled L-proline","synonyms":[{"name":"13C(5) Silac label","type":"related"},{"name":"Label:13C(5)","type":"related"}],"termid":"MOD:01297"}


id: GO:1905053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of base-excision repair.","definition_xrefs":["PMID:18973764","GO_REF:0000058","GOC:ah","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA repair","termid":"GO:0045739"},{"relation_name":"is_a","term_name":"regulation of base-excision repair","termid":"GO:1905051"},{"relation_name":"positively_regulates","term_name":"base-excision repair","termid":"GO:0006284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"positively_regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"positive regulation of base-excision repair","synonyms":[{"name":"activation of BER","type":"narrow"},{"name":"activation of base-excision repair","type":"narrow"},{"name":"positive regulation of BER","type":"exact"},{"name":"up regulation of BER","type":"exact"},{"name":"up regulation of base-excision repair","type":"exact"},{"name":"up-regulation of BER","type":"exact"},{"name":"up-regulation of base-excision repair","type":"exact"},{"name":"upregulation of BER","type":"exact"},{"name":"upregulation of base-excision repair","type":"exact"}],"termid":"GO:1905053"}


id: GO:0015422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + oligosaccharide(out) = ADP + phosphate + oligosaccharide(in).","definition_xrefs":["EC:7.5.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide transmembrane transporter activity","termid":"GO:0015157"},{"relation_name":"is_a","term_name":"ABC-type carbohydrate transporter activity","termid":"GO:0043211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type oligosaccharide transporter activity","secondary_identifiers":["GO:0015609","MetaCyc:3.6.3.18-RXN"],"synonyms":[{"name":"ABC-type oligosaccharide transporter","type":"related"},{"name":"ATP-dependent oligosaccharide transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled oligosaccharide transmembrane transporter activity","type":"related"},{"name":"oligosaccharide ABC transporter","type":"exact"},{"name":"oligosaccharide-transporting ATPase activity","type":"related"}],"termid":"GO:0015422"}


id: PBO:0084366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipid-binding ER protein involved in ER-plasma membrane tethering; one of 6 proteins (Ist2p, Scs2p, Scs22p, Tcb1p, Tcb2p, Tcb3p) that connect ER to plasma membrane and regulate PI4P levels by controlling access of Sac1p phosphatase to its substrate PI4P in PM; contains 3 calcium and lipid binding domains; non-tagged protein also localizes to mitochondria; C-termini of Tcb1p, Tcb2p and Tcb3p interact; TCB1 has a paralog, TCB2, that arose from the whole genome duplication","termid":"PBO:0084366"}


id: PBO:0045800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endothelin receptor type A","termid":"PBO:0045800"}


id: PBO:0087606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the CoA-Synthesizing Protein Complex (CoA-SPC); subunits of this complex are: Cab2p, Cab3p, Cab4p, Cab5p, Sis2p and Vhs3p; probable dephospho-CoA kinase (DPCK) that catalyzes the last step in coenzyme A biosynthesis; involved in histone acylation; null mutant lethality is complemented by human homolog DCAKD and by E. coli coaE (encoding DPCK); detected in purified mitochondria in high-throughput studies; also localized to lipid droplets","termid":"PBO:0087606"}


id: PBO:0044763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 46","termid":"PBO:0044763"}


id: PBO:0047449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc gamma receptor IIIb","termid":"PBO:0047449"}


id: GO:0034530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-hydroxymethylsalicylaldehyde + NAD+ + H2O = 4-hydroxymethylsalicylate + NADH + 2 H+.","definition_xrefs":["UM-BBD_reactionID:r0767"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-hydroxymethylsalicyaldehyde dehydrogenase activity (obsolete GO:0034530)","termid":"GO:0034530"}


id: PBO:0062164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 5","termid":"PBO:0062164"}


id: PBO:0088043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme (E2); key E2 partner with Ubc1p for the anaphase-promoting complex (APC); mediates degradation of abnormal or excess proteins, including calmodulin and histone H3; regulates levels of DNA Polymerase-{alpha} to promote efficient and accurate DNA replication; interacts with many SCF ubiquitin protein ligases; component of the cellular stress response; UBC4 has a paralog, UBC5, that arose from the whole genome duplication","termid":"PBO:0088043"}


id: GO:0034359
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chylomicron that contains apolipoprotein C2 (APOC2), a cofactor for lipoprotein lipase (LPL) activity, and has a mean diameter of 500 nm and density of 0.95g/ml. Mature chylomicron particles transport exogenous (dietary) lipids from the intestines to other body tissues, via the blood and lymph.","definition_xrefs":["GOC:expert_pt","GOC:mah","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chylomicron","termid":"GO:0042627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"mature chylomicron","termid":"GO:0034359"}


id: PBO:0060802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S6","termid":"PBO:0060802"}


id: PBO:0047602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHF complex subunit HOOK interacting protein 2A","termid":"PBO:0047602"}


id: GO:0005246
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Modulates the activity of a calcium channel.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ion channel regulator activity","termid":"GO:0099106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0098772"],"is_obsolete":false,"name":"calcium channel regulator activity","termid":"GO:0005246"}


id: SO:0000049
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"To translocate a subsection of sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000049 translocate (obsolete SO:0000049)","termid":"SO:0000049"}


id: GO:0009605
data:
  {"annotated_genes":["SJAG_02258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050982"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an external stimulus.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to external stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to environmental stimulus","type":"exact"}],"termid":"GO:0009605","terms_by_termid":{"GO:0050982":null}}


id: GO:0060723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of cell proliferation involved in embryonic placenta development.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"cell proliferation involved in embryonic placenta development","termid":"GO:0060722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell proliferation involved in embryonic placenta development","termid":"GO:0060723"}


id: PBO:0058501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5692c-1","termid":"PBO:0058501"}


id: PBO:0067801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 103","termid":"PBO:0067801"}


id: PR:Q9USY1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1861.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USY1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine-metabolizing bifunctional protein C1861.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1861.05","synonyms":[{"name":"Spom972h-SPBC1861.05","type":"exact"}],"termid":"PR:Q9USY1"}


id: GO:0015147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-arabinose from one side of a membrane to the other. Arabinose occurs free, for example in the heartwood of many conifers and in the combined states, in both furanose and pyranose forms, as a constituent of various plant hemicelluloses, bacterial polysaccharides, etc.","definition_xrefs":["ISBN:0198506732","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabinose transmembrane transporter activity","termid":"GO:0042900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"L-arabinose transmembrane transporter activity","synonyms":[{"name":"L-arabinose/beta-D-thiogalactopyranoside:hydrogen antiporter activity","type":"narrow"}],"termid":"GO:0015147"}


id: PBO:0062172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 15","termid":"PBO:0062172"}


id: PBO:0040092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase L","termid":"PBO:0040092"}


id: PR:O14218
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6B12.13 gene.","definition_xrefs":["UniProtKB:O14218","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 phosphatases regulator ypi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.13","synonyms":[{"name":"Spom972h-SPAC6B12.13","type":"exact"}],"termid":"PR:O14218"}


id: GO:0106271
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinose + NADP+ = D-arabinono-1,4-lactone + NADPH.","definition_xrefs":["RHEA:21892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-arabinose 1-dehydrogenase [NAD(P)+] activity","termid":"GO:0045290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"D-arabinose 1-dehydrogenase (NADP+) activity","termid":"GO:0106271"}


id: PBO:0083068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrouridine synthase; member of a widespread family of conserved proteins including Smm1p, Dus1p, and Dus3p","termid":"PBO:0083068"}


id: GO:1902962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metalloendopeptidase activity involved in amyloid precursor protein catabolic process.","definition_xrefs":["GO_REF:0000059","GOC:sjp","GOC:TermGenie","PMID:18362153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amyloid precursor protein catabolic process","termid":"GO:1902991"},{"relation_name":"is_a","term_name":"regulation of metalloendopeptidase activity","termid":"GO:1904683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process","synonyms":[{"name":"regulation of metalloendopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"regulation of metalloendopeptidase activity involved in APP catabolism","type":"exact"},{"name":"regulation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of metalloendoprotease activity involved in APP catabolic process","type":"exact"},{"name":"regulation of metalloendoprotease activity involved in APP catabolism","type":"exact"},{"name":"regulation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"regulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"regulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"exact"}],"termid":"GO:1902962"}


id: PBO:0047809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box L3","termid":"PBO:0047809"}


id: PBO:0109461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar RNA-binding protein, human LYAR homolog, involved in rRNA processing","termid":"PBO:0109461"}


id: GO:0008117
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sphinganine 1-phosphate = phosphoethanolamine + palmitaldehyde.","definition_xrefs":["EC:4.1.2.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"sphinganine-1-phosphate aldolase activity","secondary_identifiers":["Reactome:R-HSA-428681","MetaCyc:SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN","GO:0016001","RHEA:18593"],"synonyms":[{"name":"dihydrosphingosine 1-phosphate aldolase activity","type":"related"},{"name":"sphinganine-1-phosphate alkanal-lyase activity","type":"related"},{"name":"sphinganine-1-phosphate lyase activity","type":"related"},{"name":"sphinganine-1-phosphate palmitaldehyde-lyase (phosphoethanolamine-forming)","type":"related"},{"name":"sphinganine-1-phosphate palmitaldehyde-lyase activity","type":"related"},{"name":"sphingosine-1-phosphate aldolase activity","type":"related"},{"name":"sphingosine-1-phosphate lyase activity","type":"related"}],"termid":"GO:0008117"}


id: GO:0140938
data:
  {"annotated_genes":["SJAG_00769","SJAG_03487","SJAG_02873","SJAG_04574"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140954"},{"annotations":[91545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140955"},{"annotations":[112576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062122"},{"annotations":[112620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042800"},{"annotations":[112621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140999"},{"annotations":[106547,106548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046974"},{"annotations":[106549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140948"},{"annotations":[106550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140949"},{"annotations":[106551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140947"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a histone H3 = S-adenosyl-L-homocysteine + a methylated histone H3. Histone methylation generally occurs on either an arginine or a lysine residue.","definition_xrefs":["PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone methyltransferase activity","termid":"GO:0042054"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00769":null,"SJAG_02873":null,"SJAG_03487":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0008276","GO:0140096","GO:0016741"],"is_obsolete":false,"name":"histone H3 methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5661117","Reactome:R-HSA-5637686","Reactome:R-HSA-5649802","Reactome:R-HSA-5638157","Reactome:R-HSA-5649801","Reactome:R-HSA-5244692","Reactome:R-HSA-5634729","Reactome:R-HSA-5649764","Reactome:R-HSA-5638332","Reactome:R-HSA-5159245","Reactome:R-HSA-8936584","Reactome:R-HSA-8936608","Reactome:R-HSA-9842833","Reactome:R-HSA-9844057","Reactome:R-HSA-5205799","Reactome:R-HSA-4827383","Reactome:R-HSA-8937022","Reactome:R-HSA-9844006","Reactome:R-HSA-3788745","Reactome:R-HSA-8937113","Reactome:R-HSA-3788748","Reactome:R-HSA-4827382","Reactome:R-HSA-5638333","Reactome:R-HSA-5649800","Reactome:R-HSA-5634750","Reactome:R-HSA-5634802","Reactome:R-HSA-5638141","Reactome:R-HSA-5649799"],"synonyms":[{"name":"histone H3 methylase activity","type":"exact"},{"name":"histone H3 methylation","type":"related"}],"termid":"GO:0140938","terms_by_termid":{"GO:0042800":null,"GO:0046974":null,"GO:0062122":null,"GO:0140947":null,"GO:0140948":null,"GO:0140949":null,"GO:0140954":null,"GO:0140955":null,"GO:0140999":null}}


id: FYPO:0000861
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115632,115631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[115624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone methylation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone modification during vegetative growth","termid":"FYPO:0002600"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03118","SJAG_02621","SJAG_03689"],"name":"normal histone methylation during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"normal histone methylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000861","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0006989":null}}


id: PBO:0038478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily B member 1","termid":"PBO:0038478"}


id: GO:0010808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of synaptic vesicle priming. Synaptic vesicle priming is the formation of SNARE-containing complexes, bringing synaptic vesicle membrane and plasma membranes into close proximity and thereby facilitating membrane fusion.","definition_xrefs":["GOC:tb","GOC:dph","GOC:kmv","PMID:15489511"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic vesicle priming","termid":"GO:0010807"},{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"positively_regulates","term_name":"synaptic vesicle priming","termid":"GO:0016082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"positive regulation of synaptic vesicle priming","termid":"GO:0010808"}


id: GO:0009545
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A leucoplast in which oil is stored.","definition_xrefs":["ISBN:0140514031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leucoplast","termid":"GO:0009516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"elaioplast","secondary_identifiers":["Wikipedia:Elaioplast"],"termid":"GO:0009545"}


id: FYPO:0003625
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the microtubule cytoskeleton is abnormal during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0002399","FYPO:0000054"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton morphology during mitotic interphase","synonyms":[{"name":"abnormal microtubule cytoskeleton morphology during interphase of mitotic cell cycle","type":"exact"},{"name":"abnormal microtubule cytoskeleton morphology during mitotic interphase during vegetative growth","type":"related"}],"termid":"FYPO:0003625"}


id: GO:1903676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cap-dependent translational initiation.","definition_xrefs":["GOC:TermGenie","GOC:bf","GOC:PARL","GO_REF:0000058","PMID:11959995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cap-dependent translational initiation","termid":"GO:1903674"},{"relation_name":"is_a","term_name":"positive regulation of cytoplasmic translational initiation","termid":"GO:1904690"},{"relation_name":"positively_regulates","term_name":"cap-dependent translational initiation","termid":"GO:0002191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0002181"],"is_obsolete":false,"name":"positive regulation of cap-dependent translational initiation","synonyms":[{"name":"activation of cap-dependent translational initiation","type":"narrow"},{"name":"up regulation of cap-dependent translational initiation","type":"exact"},{"name":"up-regulation of cap-dependent translational initiation","type":"exact"},{"name":"upregulation of cap-dependent translational initiation","type":"exact"}],"termid":"GO:1903676"}


id: GO:0019674
data:
  {"annotated_genes":["SJAG_01310","SJAG_02135","SJAG_01500","SJAG_01359","SJAG_03828","SJAG_04192","SJAG_03373","SJAG_02945","SJAG_06622","SJAG_00605","SJAG_02009","SJAG_01582","SJAG_04495","SJAG_04334","SJAG_04693","SJAG_00409","SJAG_02889","SJAG_03946","SJAG_00027","SJAG_04152","SJAG_01566","SJAG_02107","SJAG_00839","SJAG_03903","SJAG_03298","SJAG_06621","SJAG_01012","SJAG_03091","SJAG_01539","SJAG_00957","SJAG_03660","SJAG_02618","SJAG_02369","SJAG_02796","SJAG_00461"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87964,92519,93534],"is_not":false,"summary":null,"term":"GO:0019674"},{"annotations":[105440,101870,99449,94057,94332,100522,91072,101503,90583,104978,104979,99707,104980,101869,104982,104984,101504,101505,104981,105442,105443,104983,105445,112428,105439,105441,105444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[95401,86708,87125,109157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034356"},{"annotations":[113376,96125],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[101158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019677"},{"annotations":[85082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[101159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006734"},{"annotations":[108920,90039,92783,102547],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006116"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving nicotinamide adenine dinucleotide (NAD), a coenzyme present in most living cells and derived from the B vitamin nicotinic acid.","definition_xrefs":["GOC:jl","ISBN:0618254153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"},{"relation_name":"is_a","term_name":"nicotinamide nucleotide metabolic process","termid":"GO:0046496"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00409":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_00957":null,"SJAG_01012":null,"SJAG_01310":null,"SJAG_01359":null,"SJAG_01500":null,"SJAG_01539":null,"SJAG_01566":null,"SJAG_01582":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02618":null,"SJAG_02796":null,"SJAG_02889":null,"SJAG_02945":null,"SJAG_03091":null,"SJAG_03298":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03946":null,"SJAG_04152":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04693":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"NAD metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"NAD (oxidized) metabolic process","type":"exact"},{"name":"NAD (oxidized) metabolism","type":"exact"},{"name":"NAD metabolism","type":"exact"},{"name":"NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"oxidized NAD metabolic process","type":"exact"},{"name":"oxidized NAD metabolism","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide metabolism","type":"exact"}],"termid":"GO:0019674","terms_by_termid":{"GO:0006116":null,"GO:0006734":null,"GO:0009435":null,"GO:0019674":null,"GO:0019677":null,"GO:0034355":null,"GO:0034356":null,"GO:0061621":null}}


id: GO:0051330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle 'gap' phase which is the interval between the completion of DNA segregation by meiosis and the beginning of DNA synthesis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G1 phase","termid":"GO:0051318"},{"relation_name":"part_of","term_name":"meiotic interphase","termid":"GO:0051328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051328"}],"interesting_parent_ids":["GO:0051328","GO:0008150"],"is_obsolete":false,"name":"meiotic G1 phase","synonyms":[{"name":"G1 phase of meiotic cell cycle","type":"exact"}],"termid":"GO:0051330"}


id: GO:0014058
data:
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id: PBO:0064147
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id: PBO:0083137
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id: GO:0051983
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id: GO:0032179
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id: PBO:0052568
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id: PBO:0043466
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id: GO:0099568
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id: GO:1900840
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id: GO:1901511
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id: GO:0002687
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id: PBO:0038641
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id: PBO:0079136
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id: PBO:0068088
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id: PBO:0004269
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id: PBO:0017628
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id: PBO:0080282
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id: PR:O59828
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- alr1 gene.","definition_xrefs":["UniProtKB:O59828","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine racemase, catabolic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.08c","synonyms":[{"name":"Spom972h-alr1","type":"exact"}],"termid":"PR:O59828"}


id: PBO:0042957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 11","termid":"PBO:0042957"}


id: PBO:0090451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribose diphosphatase, NudF subfamily Ysa1","termid":"PBO:0090451"}


id: PBO:0017614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase Fol2 (predicted)","termid":"PBO:0017614"}


id: PR:Q9US00
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- amt2 gene.","definition_xrefs":["UniProtKB:Q9US00","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium transporter 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.14","synonyms":[{"name":"Spom972h-amt2","type":"exact"}],"termid":"PR:Q9US00"}


id: PBO:0074987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-29","termid":"PBO:0074987"}


id: GO:0003002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pattern specification process that results in the subdivision of an axis or axes in space to define an area or volume in which specific patterns of cell differentiation will take place or in which cells interpret a specific environment.","definition_xrefs":["GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regionalization","synonyms":[{"name":"pattern formation","type":"related"}],"termid":"GO:0003002"}


id: FYPO:0007495
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the Mei2 nuclear dot is normal (i.e. indistinguishable from wild type). The Mei2 nuclear dot is a nuclear body that contains Mei2, other proteins, and meiRNA, and forms during meiotic prophase in a fixed position in the horsetail nucleus.","definition_xrefs":["PomBase:mah","PMID:24920274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to Mei2 nuclear dot","synonyms":[{"name":"normal protein localisation to Mei2 nuclear dot","type":"exact"},{"name":"normal protein localization to meiRNA nuclear dot","type":"related"}],"termid":"FYPO:0007495"}


id: PBO:0001252
data:
  {"annotation_feature_type":"gene","cv_name":"ex_tools","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deletion solves arginine-conversion problem","termid":"PBO:0001252"}


id: PBO:0081190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zic family member 3","termid":"PBO:0081190"}


id: PR:O13871
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B3.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized methyltransferase C1B3.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.06c","synonyms":[{"name":"Spom972h-SPAC1B3.06c","type":"exact"}],"termid":"PR:O13871"}


id: PR:Q9P7V4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein KTI12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01817","PANTHER:PTHR12435:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kti12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30.02c","secondary_identifiers":["UniProtKB:Q9P7V4"],"synonyms":[{"name":"Spom972h-KTI12","type":"exact"}],"termid":"PR:Q9P7V4"}


id: PBO:0059816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 42","termid":"PBO:0059816"}


id: GO:0099138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of a chimeric sorocarp in which cells of all genotypes have an equal chance of becoming a spore cell.","definition_xrefs":["PMID:18272966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chimeric sorocarp development","termid":"GO:0099134"},{"relation_name":"is_a","term_name":"altruistic, chimeric, non-reproductive fruiting body development","termid":"GO:0099137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"altruistic, chimeric sorocarp development","synonyms":[{"name":"fully co-operative, chimeric sorocarp development","type":"exact"}],"termid":"GO:0099138"}


id: PBO:0108914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAG3 cohesin complex component","termid":"PBO:0108914"}


id: GO:0102796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3,4-dihydroxybenzaldehyde + O2 + H2O = H+ + 3,4-dihydroxybenzoate + hydrogen peroxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete protocatechualdehyde:oxygen oxidoreductase activity (obsolete GO:0102796)","termid":"GO:0102796"}


id: PR:000027621
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor zip1 ubiquitinated form in Schizosaccharomyces pombe. Ubiquitinated by SCF(Pof1). Example: UniProtKB:Q10424-1, MOD:01148.","definition_xrefs":["PMID:15660136","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor zip1","termid":"PR:000027614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor zip1 ubiquitinated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC25G10.03","synonyms":[{"name":"Spom-zip1/UbiqLys+","type":"exact"}],"termid":"PR:000027621"}


id: PBO:0034122
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-surrounds","termid":"PBO:0034122"}


id: PBO:0028391
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_glyoxalase_III_activity","termid":"PBO:0028391"}


id: PBO:0039055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiogenic factor with G-patch and FHA domains 1 pseudogene 4","termid":"PBO:0039055"}


id: PBO:0070618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 2","termid":"PBO:0070618"}


id: GO:0050963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which an electrical stimulus is received by a cell and converted into a molecular signal as part of sensory perception.","definition_xrefs":["GOC:dos","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of stimulus involved in sensory perception","termid":"GO:0050906"},{"relation_name":"is_a","term_name":"detection of electrical stimulus","termid":"GO:0050981"},{"relation_name":"part_of","term_name":"sensory perception of electrical stimulus","termid":"GO:0050952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of electrical stimulus involved in sensory perception","synonyms":[{"name":"sensory detection of electrical stimulus","type":"exact"},{"name":"sensory detection of electrical stimulus during sensory perception","type":"exact"},{"name":"sensory perception, sensory detection of electrical stimulus","type":"exact"},{"name":"sensory perception, sensory transduction of electrical stimulus","type":"exact"},{"name":"sensory transduction of electrical stimulus","type":"exact"},{"name":"sensory transduction of electrical stimulus during sensory perception","type":"exact"}],"termid":"GO:0050963"}


id: PBO:0108940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 19","termid":"PBO:0108940"}


id: GO:0102502
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ADP alpha-D-glucoside + n a 1,4-alpha-D-glucan = ADP + n alpha-amylose.","definition_xrefs":["EC:2.4.1.242","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete ADP-glucose-starch glucosyltransferase activity (obsolete GO:0102502)","termid":"GO:0102502"}


id: PBO:0050269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 47","termid":"PBO:0050269"}


id: PBO:0109359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEL1L adaptor subunit of SYVN1 ubiquitin ligase","termid":"PBO:0109359"}


id: PBO:0032762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP 5'-nucleotidase Isn1 (predicted)","termid":"PBO:0032762"}


id: PBO:0044812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 108A","termid":"PBO:0044812"}


id: PBO:0060297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYL6 pseudogene 5","termid":"PBO:0060297"}


id: PBO:0046038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit 2 beta pseudogene 6","termid":"PBO:0046038"}


id: PBO:0056395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPRE1 pseudogene 2","termid":"PBO:0056395"}


id: PBO:0084342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kynurenine aminotransferase; catalyzes formation of kynurenic acid from kynurenine; potential Cdc28p substrate","termid":"PBO:0084342"}


id: PBO:0011108
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Baller-Gerold syndrome","termid":"PBO:0011108"}


id: PBO:0080183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VDAC2 pseudogene 4","termid":"PBO:0080183"}


id: GO:0001564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete resistance to pathogenic protozoa (obsolete GO:0001564)","synonyms":[{"name":"resistance to pathogenic protozoa","type":"exact"}],"termid":"GO:0001564"}


id: PBO:0054102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1461","termid":"PBO:0054102"}


id: PBO:0045512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSTN pseudogene 4","termid":"PBO:0045512"}


id: GO:0120514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3'-hydro-2'-hydroxy-beta-oxodihydrochalcone + UDP-alpha-D-glucose = a 3'-(beta-D-glucopyranosyl)-2'-hydroxy-beta-oxodihydrochalcone + H+ + UDP.","definition_xrefs":["RHEA:51504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"2-hydroxyflavanone C-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-18732","EC:2.4.1.360"],"termid":"GO:0120514"}


id: FYPO:0006278
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the structure of an O-linked glycan moiety of a nascent or mature glycoprotein differs from wild type.","definition_xrefs":["PomBase:mah","PMID:22988247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glycoprotein glycan structure","termid":"FYPO:0003290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0002274"},{"rel_name":"output_of","termid":"FYPO:0002494"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0003290"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0001320","FYPO:0002494","FYPO:0003290"],"is_obsolete":false,"name":"abnormal O-linked glycoprotein glycan structure","synonyms":[{"name":"abnormal O-linked glycoprotein oligosaccharide structure","type":"related"}],"termid":"FYPO:0006278"}


id: PBO:0038879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate cyclase 6","termid":"PBO:0038879"}


id: GO:0018023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of peptidyl-lysine to form peptidyl-N6,N6,N6-trimethyl-L-lysine.","definition_xrefs":["RESID:AA0074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine methylation","termid":"GO:0018022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine trimethylation","termid":"GO:0018023"}


id: GO:1904873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of telomerase RNA localization to Cajal body.","definition_xrefs":["PMID:25467444","GOC:BHF","GO_REF:0000058","GOC:BHF_telomere","GOC:nc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of telomerase RNA localization to Cajal body","termid":"GO:1904872"},{"relation_name":"negatively_regulates","term_name":"telomerase RNA localization to Cajal body","termid":"GO:0090671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of telomerase RNA localization to Cajal body","synonyms":[{"name":"down regulation of telomerase RNA localization to Cajal body","type":"exact"},{"name":"down-regulation of telomerase RNA localization to Cajal body","type":"exact"},{"name":"downregulation of telomerase RNA localization to Cajal body","type":"exact"},{"name":"inhibition of telomerase RNA localization to Cajal body","type":"narrow"}],"termid":"GO:1904873"}


id: GO:0085018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a host organism maintains the structure and function of a symbiont-containing vacuole. The symbiont-containing vacuole is a membrane-bounded vacuole within a host cell in which a symbiont organism resides, and can serve to reduce pathogenicity of invading symbionts by restricting them to the vacuolar compartment.","definition_xrefs":["GOC:jl","GOC:yaf","PMID:18665841"],"gene_count":0,"genotype_count":0,"name":"obsolete maintenance of symbiont-containing vacuole by host (obsolete GO:0085018)","synonyms":[{"name":"maintenance of parasitophorous vacuole","type":"exact"},{"name":"maintenance of pathogen-containing vacuole","type":"exact"},{"name":"maintenance of vacuolar integrity during bacterial infection","type":"narrow"}],"termid":"GO:0085018"}


id: PBO:0057012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 103a-1","termid":"PBO:0057012"}


id: PBO:0078622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 71","termid":"PBO:0078622"}


id: PBO:0064703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 39","termid":"PBO:0064703"}


id: GO:0043987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an phosphate group to a serine residue at position 10 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-S10 phosphorylation (obsolete GO:0043987)","synonyms":[{"name":"histone H3 phosphorylation at S10","type":"exact"},{"name":"histone H3S10 phosphorylation","type":"exact"}],"termid":"GO:0043987"}


id: PBO:0078088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex 2 pseudogene 5","termid":"PBO:0078088"}


id: PBO:0071853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 48","termid":"PBO:0071853"}


id: GO:0140722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mycophenolic acid (MPA). MPA is the first isolated antibiotic natural product in the world obtained from a culture of Penicillium brevicompactum in 1893.","definition_xrefs":["PMID:21398490","PMID:31209052","PMID:26751579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antibiotic biosynthetic process","termid":"GO:0017000"},{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"mycophenolic acid biosynthetic process","synonyms":[{"name":"MPA anabolism","type":"broad"},{"name":"MPA biosynthesis","type":"broad"},{"name":"MPA formation","type":"broad"},{"name":"MPA synthesis","type":"broad"},{"name":"mycophenolic acid anabolism","type":"exact"},{"name":"mycophenolic acid biosynthesis","type":"exact"},{"name":"mycophenolic acid formation","type":"exact"},{"name":"mycophenolic acid synthesis","type":"exact"}],"termid":"GO:0140722"}


id: FYPO:0006935
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell has normal volume, dimensions and shape, and is viable, when subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal cell morphology during nitrogen starvation","termid":"FYPO:0002048"},{"relation_name":"is_a","term_name":"viable cell","termid":"FYPO:0000124"},{"relation_name":"is_a","term_name":"normal cell morphology during nitrogen starvation","termid":"FYPO:0002048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"viable cell with normal cell morphology during nitrogen starvation","synonyms":[{"name":"small viable spherical cell during nitrogen starvation","type":"exact"},{"name":"viable cell with normal cell morphology during nitrogen depletion","type":"exact"},{"name":"viable cell with normal cell morphology during nitrogen deprivation","type":"exact"},{"name":"viable cell with normal cell shape and size during nitrogen starvation","type":"exact"},{"name":"viable cell with normal morphology during nitrogen starvation","type":"exact"},{"name":"viable orb during nitrogen starvation","type":"exact"},{"name":"viable round cells during nitrogen starvation","type":"related"},{"name":"viable rounded cell during nitrogen starvation","type":"related"},{"name":"viable rounded cells during nitrogen starvation","type":"related"},{"name":"viable spherical cell during nitrogen depletion","type":"exact"},{"name":"viable spherical cell during nitrogen deprivation","type":"exact"},{"name":"viable spherical cell during nitrogen starvation","type":"exact"},{"name":"viable spheroid cell during nitrogen depletion","type":"related"},{"name":"viable spheroid cell during nitrogen deprivation","type":"related"},{"name":"viable spheroid cell during nitrogen starvation","type":"related"}],"termid":"FYPO:0006935"}


id: FYPO:0003951
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of tyrosine residues in one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein tyrosine phosphorylation during cellular response to heat (obsolete FYPO:0003951)","synonyms":[{"name":"increased peptidyl-tyrosine phosphorylation during cellular response to heat","type":"exact"},{"name":"increased protein tyrosine phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"increased protein tyrosine phosphorylation during cellular response to heat during vegetative growth","type":"exact"},{"name":"increased tyrosine phosphorylation during cellular response to heat","type":"exact"}],"termid":"FYPO:0003951"}


id: PBO:0051025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein 5","termid":"PBO:0051025"}


id: PBO:0075883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6 beta-galactoside alpha-2,6-sialyltransferase 1","termid":"PBO:0075883"}


id: PR:Q9HDY7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- scm3 gene.","definition_xrefs":["UniProtKB:Q9HDY7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB1A10.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB1A10.02","synonyms":[{"name":"Spom972h-scm3","type":"exact"}],"termid":"PR:Q9HDY7"}


id: PBO:0066943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 245","termid":"PBO:0066943"}


id: GO:0098863
data:
  {"annotated_genes":["SJAG_04003","SJAG_03073","SJAG_02737","SJAG_03673","SJAG_03835","SJAG_02509","SJAG_04387"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97499,100078,103482,105664,108194,110017,113025],"is_not":false,"summary":null,"term":"GO:0098863"}]},"cv_name":"biological_process","definition":"The directed movement of the nucleus by pushing forces exerted by polymerization of backward-extending microtubules.","definition_xrefs":["PMID:16611238","PMID:11309419","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration","termid":"GO:0007097"},{"relation_name":"is_a","term_name":"microtubule polymerization based movement","termid":"GO:0099098"},{"relation_name":"is_a","term_name":"microtubule-based transport","termid":"GO:0099111"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02509":null,"SJAG_02737":null,"SJAG_03073":null,"SJAG_03673":null,"SJAG_03835":null,"SJAG_04003":null,"SJAG_04387":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"nuclear migration by microtubule mediated pushing forces","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0098863","terms_by_termid":{"GO:0098863":null}}


id: GO:1900194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of oocyte maturation.","definition_xrefs":["GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oocyte maturation","termid":"GO:1900193"},{"relation_name":"is_a","term_name":"negative regulation of cell maturation","termid":"GO:1903430"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"oocyte maturation","termid":"GO:0001556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of oocyte maturation","synonyms":[{"name":"down regulation of oocyte maturation","type":"exact"},{"name":"down-regulation of oocyte maturation","type":"exact"},{"name":"downregulation of oocyte maturation","type":"exact"},{"name":"inhibition of oocyte maturation","type":"narrow"}],"termid":"GO:1900194"}


id: PBO:0031452
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_pore_distribution","termid":"PBO:0031452"}


id: PBO:0076891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 45","termid":"PBO:0076891"}


id: PBO:0028426
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_sodium_fluoride","termid":"PBO:0028426"}


id: PBO:0027673
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_ascospore_release_from_ascus","termid":"PBO:0027673"}


id: PBO:0111526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIFK pseudogene 6","termid":"PBO:0111526"}


id: GO:0071612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of IP-10 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"IP-10 production","synonyms":[{"name":"CXCL10 production","type":"exact"},{"name":"chemokine (C-C motif) ligand 10 production","type":"exact"}],"termid":"GO:0071612"}


id: GO:0008884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N1-(gamma-L-glutamyl-L-cysteinyl-glycyl)-spermidine + H2O = gamma-L-glutamyl-L-cysteinyl-glycine + spermidine.","definition_xrefs":["EC:3.5.1.78"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"glutathionylspermidine amidase activity","secondary_identifiers":["MetaCyc:GSPAMID-RXN","RHEA:17173"],"synonyms":[{"name":"GSP amidase activity","type":"related"},{"name":"gamma-L-glutamyl-L-cysteinyl-glycine:spermidine amidase activity","type":"related"},{"name":"glutathionylspermidine amidohydrolase (spermidine-forming) activity","type":"related"}],"termid":"GO:0008884"}


id: GO:0007305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Construction of the vitelline membrane portion of a chorion-containing eggshell. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitelline membrane formation","termid":"GO:0030704"},{"relation_name":"part_of","term_name":"chorion-containing eggshell formation","termid":"GO:0007304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"vitelline membrane formation involved in chorion-containing eggshell formation","synonyms":[{"name":"vitelline membrane formation in chorion-containing eggshell","type":"exact"}],"termid":"GO:0007305"}


id: PBO:0003699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIA complex large subunit Toa1 (predicted)","termid":"PBO:0003699"}


id: _global:acts_upstream_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c acts upstream of p if and only if c enables some f that is involved in p' and p' occurs chronologically before p, is not part of p, and affects the execution of p. c is a material entity and f, p, p' are processes.","direct_ancestors":[{"relation_name":"is_a","term_name":"acts_upstream_of_or_within","termid":"_global:acts_upstream_of_or_within"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acts_upstream_of","secondary_identifiers":["RO:0002263"],"termid":"_global:acts_upstream_of"}


id: PBO:0079972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 10","termid":"PBO:0079972"}


id: PBO:0025427
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperlysinemia","termid":"PBO:0025427"}


id: GO:0071081
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha3-beta1 integrin complex bound to the tetraspanin CD63.","definition_xrefs":["PMID:7629079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"alpha3-beta1 integrin-CD63 complex","synonyms":[{"name":"ITGA3-ITGB1-CD63 complex","type":"narrow"}],"termid":"GO:0071081"}


id: GO:0048705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the skeleton are generated and organized.","definition_xrefs":["GOC:dph","GOC:jid","GOC:tb","GOC:dsf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"skeletal system development","termid":"GO:0001501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal system morphogenesis","synonyms":[{"name":"skeletal morphogenesis","type":"exact"}],"termid":"GO:0048705"}


id: PBO:0055992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and WD repeat domain containing 1","termid":"PBO:0055992"}


id: FYECO:0000268
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which trichostatin A was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ trichostatin A","termid":"FYECO:0000268"}


id: PBO:0045226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C14","termid":"PBO:0045226"}


id: SO:0000347
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match against a nucleotide sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"match","termid":"SO:0000343"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide_match","synonyms":[{"name":"nucleotide match","type":"exact"}],"termid":"SO:0000347"}


id: PBO:0030855
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_tacrolimus","termid":"PBO:0030855"}


id: GO:0032219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of macromolecules forming part of a cell wall that contribute to cytogamy.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall macromolecule catabolic process","termid":"GO:0016998"},{"relation_name":"part_of","term_name":"cytogamy","termid":"GO:0000755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"part_of","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0071554","GO:0000747","GO:0008150"],"is_obsolete":false,"name":"cell wall macromolecule catabolic process involved in cytogamy","synonyms":[{"name":"cell wall macromolecule catabolic process during cytogamy","type":"related"}],"termid":"GO:0032219"}


id: PBO:0039733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein C4","termid":"PBO:0039733"}


id: GO:0044497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which one organism increases the force with which blood travels through the circulatory system of another organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:19837656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of blood pressure in another organism","termid":"GO:0044495"},{"relation_name":"is_a","term_name":"positive regulation of blood pressure","termid":"GO:0045777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood pressure in another organism","synonyms":[{"name":"positive regulation of blood pressure in other organism","type":"exact"}],"termid":"GO:0044497"}


id: GO:0000252
data:
  {"annotated_genes":["SJAG_02855"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106140],"is_not":false,"summary":null,"term":"GO:0000252"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-beta-hydroxy-4-beta-methyl-5-alpha-cholesta-8,24-dien-4-alpha-carboxylate + NAD(P)+ = 4-alpha-methyl-5-alpha-cholesta-8,24-dien-3-one + CO2 + NAD(P)H.","definition_xrefs":["PMID:9811880","EC:1.1.1.170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"C-3 sterol dehydrogenase (C-4 sterol decarboxylase) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-194718","Reactome:R-HSA-194642"],"synonyms":[{"name":"3beta-hydroxy-4alpha-methylcholestenecarboxylate 3-dehydrogenase (decarboxylating)","type":"related"},{"name":"3beta-hydroxy-4beta-methyl-5alpha-cholest-7-ene-4alpha-carboxylate:NAD(P)+ 3-oxidoreductase (decarboxylating)","type":"exact"},{"name":"3beta-hydroxy-4beta-methylcholestenecarboxylate 3-dehydrogenase (decarboxylating)","type":"related"},{"name":"3beta-hydroxy-4beta-methylcholestenoate dehydrogenase activity","type":"related"},{"name":"C-3 sterol dehydrogenase (C-4 decarboxylase) activity","type":"related"},{"name":"C-3 sterol dehydrogenase activity","type":"related"},{"name":"sterol 4alpha-carboxylic decarboxylase activity","type":"related"},{"name":"sterol-4-carboxylate 3-dehydrogenase (decarboxylating) activity","type":"related"},{"name":"sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating)","type":"related"}],"termid":"GO:0000252","terms_by_termid":{"GO:0000252":null}}


id: PBO:0089164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-formyltetrahydrofolate cyclo-ligase Fau1","termid":"PBO:0089164"}


id: GO:0090116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent transfer of a methyl group to C-5 of cytosine in a DNA molecule.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete C-5 methylation of cytosine (obsolete GO:0090116)","termid":"GO:0090116"}


id: GO:0035477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of angioblast cell migration involved in selective angioblast sprouting.","definition_xrefs":["PMID:19815777","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"is_a","term_name":"regulation of vasculature development","termid":"GO:1901342"},{"relation_name":"regulates","term_name":"angioblast cell migration involved in selective angioblast sprouting","termid":"GO:0035475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of angioblast cell migration involved in selective angioblast sprouting","termid":"GO:0035477"}


id: PBO:0063599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 12","termid":"PBO:0063599"}


id: FYPO:0001964
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of aculeacin A than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002682","FYPO:0000139","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"resistance to aculeacin A","synonyms":[{"name":"resistance to aculeacin A during mitotic cell cycle","type":"related"},{"name":"resistance to aculeacin A during vegetative growth","type":"exact"},{"name":"resistant to aculeacin A","type":"exact"}],"termid":"FYPO:0001964"}


id: PBO:0003795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beige protein homolog (predicted)","termid":"PBO:0003795"}


id: PBO:0071515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 18","termid":"PBO:0071515"}


id: GO:1901881
data:
  {"annotated_genes":["SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein depolymerization.","definition_xrefs":["GOC:rl","GOC:BHF","PMID:12032137","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex disassembly","termid":"GO:0043243"},{"relation_name":"is_a","term_name":"regulation of protein depolymerization","termid":"GO:1901879"},{"relation_name":"positively_regulates","term_name":"protein depolymerization","termid":"GO:0051261"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein depolymerization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein depolymerization","type":"narrow"},{"name":"activation of protein polymer breakdown","type":"exact"},{"name":"activation of protein polymer catabolic process","type":"exact"},{"name":"activation of protein polymer catabolism","type":"exact"},{"name":"activation of protein polymer degradation","type":"exact"},{"name":"positive regulation of protein polymer breakdown","type":"exact"},{"name":"positive regulation of protein polymer catabolic process","type":"exact"},{"name":"positive regulation of protein polymer catabolism","type":"exact"},{"name":"positive regulation of protein polymer degradation","type":"exact"},{"name":"up regulation of protein depolymerization","type":"exact"},{"name":"up regulation of protein polymer breakdown","type":"exact"},{"name":"up regulation of protein polymer catabolic process","type":"exact"},{"name":"up regulation of protein polymer catabolism","type":"exact"},{"name":"up regulation of protein polymer degradation","type":"exact"},{"name":"up-regulation of protein depolymerization","type":"exact"},{"name":"up-regulation of protein polymer breakdown","type":"exact"},{"name":"up-regulation of protein polymer catabolic process","type":"exact"},{"name":"up-regulation of protein polymer catabolism","type":"exact"},{"name":"up-regulation of protein polymer degradation","type":"exact"},{"name":"upregulation of protein depolymerization","type":"exact"},{"name":"upregulation of protein polymer breakdown","type":"exact"},{"name":"upregulation of protein polymer catabolic process","type":"exact"},{"name":"upregulation of protein polymer catabolism","type":"exact"},{"name":"upregulation of protein polymer degradation","type":"exact"}],"termid":"GO:1901881","terms_by_termid":{"GO:0031117":null}}


id: PBO:0013443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCAD1 family ATP-dependent DNA helicase Fft1 (predicted)","termid":"PBO:0013443"}


id: GO:0071953
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An supramolecular fiber that consists of an insoluble core of polymerized tropoelastin monomers and a surrounding mantle of microfibrils. Elastic fibers provide elasticity and recoiling to tissues and organs, and maintain structural integrity against mechanical strain.","definition_xrefs":["GOC:BHF","GOC:mah","PMID:20236620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supramolecular fiber","termid":"GO:0099512"},{"relation_name":"part_of","term_name":"extracellular matrix","termid":"GO:0031012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"elastic fiber","synonyms":[{"name":"elastic fibre","type":"exact"},{"name":"elastin fiber","type":"exact"}],"termid":"GO:0071953"}


id: PBO:0030484
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sodium_export","termid":"PBO:0030484"}


id: MOD:01523
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ4plex 115 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ4plex-115 reporter+balance reagent acylated residue","termid":"MOD:01492"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter fragment","termid":"MOD:01521"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-115 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01523"}


id: FYPO:0004041
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a primary amine oxidase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal primary amine oxidase activity","termid":"FYPO:0004041"}


id: PBO:0062917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2Y1","termid":"PBO:0062917"}


id: PBO:0001044
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING-BoX protein","termid":"PBO:0001044"}


id: GO:0046294
data:
  {"annotated_genes":["SJAG_01457","SJAG_05256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91597,99543],"is_not":false,"summary":null,"term":"GO:0046294"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of formaldehyde (methanal, H2C=O), the simplest aldehyde.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"},{"relation_name":"is_a","term_name":"aldehyde catabolic process","termid":"GO:0046185"},{"relation_name":"is_a","term_name":"formaldehyde metabolic process","termid":"GO:0046292"},{"relation_name":"is_a","term_name":"cellular detoxification of aldehyde","termid":"GO:0110095"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01457":null,"SJAG_05256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0044281","GO:0098754","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"formaldehyde catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"formaldehyde breakdown","type":"exact"},{"name":"formaldehyde catabolism","type":"exact"},{"name":"formaldehyde degradation","type":"exact"},{"name":"methanal catabolic process","type":"exact"},{"name":"methanal catabolism","type":"exact"}],"termid":"GO:0046294","terms_by_termid":{"GO:0046294":null}}


id: PBO:0055264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2691","termid":"PBO:0055264"}


id: GO:1904706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vascular smooth muscle cell proliferation.","definition_xrefs":["PMID:23246467","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of smooth muscle cell proliferation","termid":"GO:0048662"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell proliferation","termid":"GO:1904705"},{"relation_name":"negatively_regulates","term_name":"vascular associated smooth muscle cell proliferation","termid":"GO:1990874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vascular associated smooth muscle cell proliferation","synonyms":[{"name":"down regulation of VSMC proliferation","type":"exact"},{"name":"down regulation of vascular smooth muscle cell proliferation","type":"exact"},{"name":"down-regulation of VSMC proliferation","type":"exact"},{"name":"down-regulation of vascular smooth muscle cell proliferation","type":"exact"},{"name":"downregulation of VSMC proliferation","type":"exact"},{"name":"downregulation of vascular smooth muscle cell proliferation","type":"exact"},{"name":"inhibition of VSMC proliferation","type":"narrow"},{"name":"inhibition of vascular smooth muscle cell proliferation","type":"narrow"},{"name":"negative regulation of VSMC proliferation","type":"exact"},{"name":"negative regulation of vascular smooth muscle cell proliferation","type":"exact"}],"termid":"GO:1904706"}


id: GO:0010675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, extent or frequency of the chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular carbohydrate metabolic process (obsolete GO:0010675)","termid":"GO:0010675"}


id: PBO:0055767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucyl and cystinyl aminopeptidase","termid":"PBO:0055767"}


id: GO:0052778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving diacetylchitobiose, the N,N'-diacetylated derivative of chitobiose.","definition_xrefs":["PMID:22797760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino disaccharide metabolic process","termid":"GO:0052779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"diacetylchitobiose metabolic process","synonyms":[{"name":"diacetylchitobiose metabolism","type":"exact"}],"termid":"GO:0052778"}


id: PBO:0080958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 2","termid":"PBO:0080958"}


id: PR:O14399
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ned8 gene.","definition_xrefs":["UniProtKB:O14399","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12D12.08c","synonyms":[{"name":"Spom972h-ned8","type":"exact"}],"termid":"PR:O14399"}


id: PBO:0085342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoinositide PI4,5P(2) binding protein, forms a complex with Slm2p; acts downstream of Mss4p in a pathway regulating actin cytoskeleton organization in response to stress; TORC2 complex substrate and effector; protein abundance increases in response to DNA replication stress; SLM1 has a paralog, SLM2, that arose from the whole genome duplication","termid":"PBO:0085342"}


id: PBO:0068345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 121","termid":"PBO:0068345"}


id: PBO:0004683
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae Spt4","termid":"PBO:0004683"}


id: GO:0047785
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + cortisol = adenosine 3',5'-diphosphate + cortisol 21-sulfate + H+.","definition_xrefs":["EC:2.8.2.18","RHEA:11884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016782"],"is_obsolete":false,"name":"cortisol sulfotransferase activity","secondary_identifiers":["KEGG_REACTION:R02839","MetaCyc:CORTISOL-SULFOTRANSFERASE-RXN"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:cortisol 21-sulfotransferase activity","type":"related"},{"name":"cortisol sulphotransferase activity","type":"exact"},{"name":"glucocorticoid sulfotransferase activity","type":"related"},{"name":"glucocorticosteroid sulfotransferase activity","type":"broad"}],"termid":"GO:0047785"}


id: PBO:0001777
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by P. carnii Brl1","termid":"PBO:0001777"}


id: PBO:0042195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin D3 pseudogene 2","termid":"PBO:0042195"}


id: PBO:0053579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 602","termid":"PBO:0053579"}


id: PBO:0036023
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_trimethylation_during_vegetative_growth","termid":"PBO:0036023"}


id: PBO:0084739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial intermembrane space protein; involved in phospholipid metabolism; forms complex with Mdm35p that transfers phosphatidylserine from outer membrane to inner membrane for phosphatidylethanolamine synthesis; null mutant has defects in mitochondrial morphology; similar to Ups1p, Ups3p and to human PRELI; UPS2 has a paralog, UPS3, that arose from the whole genome duplication","termid":"PBO:0084739"}


id: PBO:0090352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ski complex TPR repeat subunit Ski3","termid":"PBO:0090352"}


id: PBO:0083142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps 3' end of verified gene NUP53/YMR153W","termid":"PBO:0083142"}


id: PBO:0001657
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinitis pigmentosa","termid":"PBO:0001657"}


id: GO:0038012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which internalization of a Wnt receptor stops, prevents, or reduces the frequency, rate or extent of Wnt signal transduction.","definition_xrefs":["PMID:19643732","GOC:rl","PMID:17908284","GOC:bf","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of Wnt signaling pathway by Wnt receptor internalization (obsolete GO:0038012)","synonyms":[{"name":"ligand-dependent internalization of Frizzled","type":"narrow"},{"name":"negative regulation of Wnt receptor signaling pathway by Wnt receptor endocytosis","type":"narrow"},{"name":"negative regulation of Wnt receptor signaling pathway by Wnt receptor internalization","type":"exact"},{"name":"negative regulation of Wnt receptor signalling pathway by Wnt receptor internalization","type":"exact"},{"name":"negative regulation of Wnt-activated signaling pathway by Wnt receptor internalization","type":"exact"}],"termid":"GO:0038012"}


id: PBO:0048326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 37","termid":"PBO:0048326"}


id: GO:0120097
data:
  {"annotated_genes":["SJAG_00295","SJAG_06425"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85615,87274],"is_not":false,"summary":null,"term":"GO:0120097"}]},"cv_name":"cellular_component","definition":"A protein complex that is involved in the transfer of the second mannose to the glycosylphosphatidylinositol (GPI) during GPI precursor assembly. In yeast S. cerevisiae this complex consists of GPI18p and PGA1p.","definition_xrefs":["GOC:bhm","PMID:17615295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase complex","termid":"GO:0031501"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00295":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005783"],"is_obsolete":false,"name":"glycosylphosphatidylinositol-mannosyltransferase II complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GPI-MT-I complex","type":"related"}],"termid":"GO:0120097","terms_by_termid":{"GO:0120097":null}}


id: GO:0072563
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A blood microparticle that is derived from, and contains membrane receptors as well as other proteins characteristic of, an endothelial cell.","definition_xrefs":["GOC:mah","PMID:16373184","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood microparticle","termid":"GO:0072562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"endothelial microparticle","termid":"GO:0072563"}


id: PBO:0060085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 32","termid":"PBO:0060085"}


id: PBO:0072193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 10","termid":"PBO:0072193"}


id: GO:0044299
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The axon of a dorsal root ganglion cell that are responsive to pain and temperature. C-fibers are small in diameter (0.2-1.5 um) and unmyelinated.","definition_xrefs":["NIF_Subcellular:nlx_subcell_20090210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"C-fiber","synonyms":[{"name":"C-fibre","type":"exact"}],"termid":"GO:0044299"}


id: PBO:0039358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenin Y-linked","termid":"PBO:0039358"}


id: SO:0100009
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A peptide that acts as a signal for both membrane translocation and lipid attachment in prokaryotes.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleaved_peptide_region","termid":"SO:0100011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"lipoprotein_signal_peptide","synonyms":[{"name":"lipoprotein signal peptide","type":"exact"},{"name":"prokaryotic membrane lipoprotein lipid attachment site","type":"exact"}],"termid":"SO:0100009"}


id: GO:0000144
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ring-shaped structure that forms at the site of cytokinesis in the bud neck of a budding cell; composed of members of the conserved family of filament forming proteins called septins as well as septin-associated proteins. In S. cerevisiae, this structure forms at the time of bud emergence and the septins show a high rate of exchange.","definition_xrefs":["PMID:16009555","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular bud neck septin structure","termid":"GO:0000399"},{"relation_name":"is_a","term_name":"septin ring","termid":"GO:0005940"},{"relation_name":"is_a","term_name":"cleavage apparatus septin structure","termid":"GO:0032161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"cellular bud neck septin ring","termid":"GO:0000144"}


id: PBO:0052740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 32","termid":"PBO:0052740"}


id: GO:0034276
data:
  {"annotated_genes":["SJAG_04988"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95443],"is_not":false,"summary":null,"term":"GO:0034276"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of kynurenic acid, 4-hydroxyquinoline-2-carboxylic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kynurenic acid metabolic process","termid":"GO:0034275"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04988":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"kynurenic acid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"4-hydroxyquinoline-2-carboxylic acid biosynthetic process","type":"exact"},{"name":"kynurenic acid anabolism","type":"exact"},{"name":"kynurenic acid biosynthesis","type":"exact"},{"name":"kynurenic acid formation","type":"related"},{"name":"kynurenic acid synthesis","type":"exact"}],"termid":"GO:0034276","terms_by_termid":{"GO:0034276":null}}


id: PBO:0039339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline phosphatase, pseudogene","termid":"PBO:0039339"}


id: PBO:0031150
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_substance_in_cell","termid":"PBO:0031150"}


id: GO:0050145
data:
  {"annotated_genes":["SJAG_03798","SJAG_00779","SJAG_04849","SJAG_02038","SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004127"},{"annotations":[94193,114675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004017"},{"annotations":[98303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004385"},{"annotations":[114095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004798"},{"annotations":[111651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033862"},{"annotations":[114096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009041"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + nucleoside monophosphate = ADP + nucleoside diphosphate.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"},{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00779":null,"SJAG_02038":null,"SJAG_03798":null,"SJAG_04657":null,"SJAG_04849":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"nucleoside monophosphate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-73635","EC:2.7.4.4","Reactome:R-HSA-6788798","Reactome:R-HSA-73548","GO:0019201","Reactome:R-HSA-2162092","Reactome:R-HSA-6788810","Reactome:R-HSA-75125","MetaCyc:NUCLEOSIDE-PHOSPHATE-KINASE-RXN","RHEA:24036","Reactome:R-HSA-9754978","Reactome:R-HSA-75126"],"synonyms":[{"name":"ATP:nucleoside-phosphate phosphotransferase activity","type":"related"},{"name":"NMP-kinase activity","type":"related"},{"name":"nucleoside-phosphate kinase activity","type":"exact"},{"name":"nucleotide kinase activity","type":"related"}],"termid":"GO:0050145","terms_by_termid":{"GO:0004017":null,"GO:0004127":null,"GO:0004385":null,"GO:0004798":null,"GO:0009041":null,"GO:0033862":null}}


id: GO:0048225
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular matrix part that consists of fatty acid-derived polymers, including both aromatic and aliphatic components. The suberin network is found in specialized plant cell walls, where it is laid down between the primary wall and plasma membrane, forms protective and wound-healing layers, and provides a water-impermeable diffusion barrier.","definition_xrefs":["GOC:jid","GOC:mah","PMID:7706282","PMID:18440267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"secondary cell wall","termid":"GO:0009531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"suberin network","termid":"GO:0048225"}


id: GO:1990063
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. In E. coli it is composed of BamABCDE, of the outer membrane protein BamA, and four lipoproteins BamB, BamC, BamD and BamE. BamA interacts directly with BamB and the BamCDE subcomplex.","definition_xrefs":["PMID:20378773","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"periplasmic side of cell outer membrane","termid":"GO:0031241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Bam protein complex","synonyms":[{"name":"OMP complex","type":"exact"}],"termid":"GO:1990063"}


id: PBO:0073824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 3","termid":"PBO:0073824"}


id: GO:0036290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phosphorylation by a protein of a residue on an identical protein. For example, phosphorylation by the other kinase within a homodimer.","definition_xrefs":["PMID:20516151","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein autophosphorylation","termid":"GO:0046777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein trans-autophosphorylation","synonyms":[{"name":"trans-autophosphorylation","type":"exact"}],"termid":"GO:0036290"}


id: PBO:0048242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 12C","termid":"PBO:0048242"}


id: GO:0141185
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A molecular adaptor recognizes and binds a target protein containing a UFM1 modification and brings the target protein into contact with another protein to allow those proteins to function in a coordinated way.","definition_xrefs":["PMID:38383789","PMID:36848233","PMID:32537488","PMID:38383785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein reader activity","termid":"GO:0140035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0030674","GO:0005515","GO:0003674","GO:0060090","GO:0005488"],"is_obsolete":false,"name":"UFM1-modified protein reader activity","synonyms":[{"name":"UFM1 modified protein reader activity","type":"exact"},{"name":"UFM1-dependent protein binding","type":"exact"}],"termid":"GO:0141185"}


id: MOD:01860
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to L-cysteine bacillithiol disulfide.","definition_xrefs":["RESID:AA0563","ChEBI:61338","PubMed:19578333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"disulfide conjugated residue","termid":"MOD:01862"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cysteine bacillithiol disulfide","synonyms":[{"name":"(2S)-(2-[S-(L-cystein-S-yl)-L-cysteinyl]amino-2-deoxy-alpha-D-glucopyranosyloxy)-butanedioic acid","type":"exact"},{"name":"BSH","type":"exact"},{"name":"L-cysteine bacillithiol disulfide","type":"exact"},{"name":"MOD_RES S-bacillithiol cysteine disulfide","type":"exact"}],"termid":"MOD:01860"}


id: FYPO:0001629
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-methionine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular methionine level","termid":"FYPO:0001639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal vacuolar methionine level","synonyms":[{"name":"normal level of methionine in vacuole","type":"exact"},{"name":"normal vacuolar L-methionine level","type":"exact"},{"name":"normal vacuolar methionine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar methionine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001629"}


id: GO:0010230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Alternative respiration pathway consumes oxygen, oxidizes NADH to NAD+ and generates water. During electron flow, proton motive force is diminished resulting in fewer molecules of ATP compared to cytochrome pathway. The pathway is found in plants, algae and some protozoa.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"alternative respiration","termid":"GO:0010230"}


id: PBO:0083803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein that associates with contractile actomyosin ring; required for ingression of the plasma membrane into the bud neck during cytokinesis; C2 domain, a membrane targeting module, is required for function; activates chitin synthase activity of Chs2p during cytokinesis","termid":"PBO:0083803"}


id: PBO:0053633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 680","termid":"PBO:0053633"}


id: GO:0010918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment or extent of a mitochondrial membrane potential, the electric potential existing across any mitochondrial membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of membrane potential","termid":"GO:0045838"},{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane potential","termid":"GO:0051881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitochondrial membrane potential","synonyms":[{"name":"elevation of mitochondrial membrane potential","type":"exact"}],"termid":"GO:0010918"}


id: GO:0042666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from specifying into an ectoderm cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"regulation of ectodermal cell fate specification","termid":"GO:0042665"},{"relation_name":"negatively_regulates","term_name":"ectodermal cell fate specification","termid":"GO:0001715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ectodermal cell fate specification","synonyms":[{"name":"down regulation of ectodermal cell fate specification","type":"exact"},{"name":"down-regulation of ectodermal cell fate specification","type":"exact"},{"name":"downregulation of ectodermal cell fate specification","type":"exact"},{"name":"inhibition of ectodermal cell fate specification","type":"narrow"},{"name":"negative regulation of ectoderm cell fate specification","type":"exact"},{"name":"suppression of ectoderm cell fate","type":"exact"},{"name":"suppression of ectodermal cell fate","type":"exact"}],"termid":"GO:0042666"}


id: GO:0031105
data:
  {"annotated_genes":["SJAG_00663","SJAG_03688","SJAG_01769","SJAG_04470","SJAG_03374","SJAG_01277","SJAG_04375"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96170,112037,90558,102052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032152"},{"annotations":[97018,93958,96173,99985],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032151"}]},"cv_name":"cellular_component","definition":"A protein complex containing septins. Typically, these complexes contain multiple septins and are oligomeric.","definition_xrefs":["GOC:mah","PMID:15385632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cell cortex","termid":"GO:0005938"},{"relation_name":"part_of","term_name":"septin cytoskeleton","termid":"GO:0032156"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00663":null,"SJAG_01277":null,"SJAG_01769":null,"SJAG_03374":null,"SJAG_03688":null,"SJAG_04375":null,"SJAG_04470":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"septin complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031105","terms_by_termid":{"GO:0032151":null,"GO:0032152":null}}


id: PBO:0049288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 7, pseudogene","termid":"PBO:0049288"}


id: GO:0003047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by the catecholamine signaling molecule epinephrine.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure mediated by a chemical signal","termid":"GO:0003044"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by norepinephrine-epinephrine","termid":"GO:0001993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by epinephrine","synonyms":[{"name":"blood pressure regulation by epinephrine","type":"related"},{"name":"regulation of blood pressure by adrenaline","type":"exact"}],"termid":"GO:0003047"}


id: GO:1990561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is deprived of copper ions.","definition_xrefs":["GOC:al","PMID:10593913"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to copper ion starvation (obsolete GO:1990561)","termid":"GO:1990561"}


id: PBO:0043419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnosine dipeptidase 2","termid":"PBO:0043419"}


id: PBO:0053021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LANCL1 antisense RNA 1","termid":"PBO:0053021"}


id: PBO:0056733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoderm specific transcript pseudogene 2","termid":"PBO:0056733"}


id: GO:0015865
data:
  {"annotated_genes":["SJAG_04325","SJAG_04328","SJAG_00612","SJAG_00760","SJAG_03334","SJAG_03452","SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[98919,106949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015866"},{"annotations":[106950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015867"},{"annotations":[111218,63219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903790"},{"annotations":[97412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[97413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[106951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[98920,106952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[86886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"},{"annotations":[88954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"}]},"cv_name":"biological_process","definition":"The directed movement of a purine nucleotide, any compound consisting of a purine nucleoside esterified with (ortho)phosphate, into, out of or within a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transport","termid":"GO:0006862"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_00760":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_04325":null,"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"purine nucleotide transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0015865","terms_by_termid":{"GO:0015866":null,"GO:0015867":null,"GO:0035348":null,"GO:0140021":null,"GO:1903790":null,"GO:1990544":null,"GO:1990549":null,"GO:1990553":null,"GO:1990554":null,"GO:1990559":null}}


id: PBO:0001057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curved DNA-binding protein Cdb4, peptidase family","termid":"PBO:0001057"}


id: GO:0019235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a slow pain stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process. Slow pain is often subjectively described as an aching or throbbing pain; in humans, the signals from a slow pain stimulus are perceived and relayed along unmyelinated C fibers to the central nervous system, reaching their target in about 1 second. Slow pain is often associated with tissue destruction.","definition_xrefs":["PMID:38704307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of pain","termid":"GO:0019233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of slow pain","termid":"GO:0019235"}


id: PBO:0055764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA TGF-beta/SMAD3 pathway interacting","termid":"PBO:0055764"}


id: PBO:0065416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit beta 3 pseudogene 2","termid":"PBO:0065416"}


id: GO:0102304
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate(3-) = 7-epi-sesquithujene + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:4.2.3.102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"sesquithujene synthase activity","secondary_identifiers":["MetaCyc:RXN-12838","RHEA:31991"],"termid":"GO:0102304"}


id: FYPO:0006418
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the cleavage and rejoining of intermediates formed during meiotic recombination is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:27304859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"},{"relation_name":"is_a","term_name":"normal cellular process during meiotic cell cycle","termid":"FYPO:0007277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal resolution of meiotic recombination intermediates","termid":"FYPO:0006418"}


id: PBO:0066806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 105","termid":"PBO:0066806"}


id: PBO:0084543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the PAK family of serine/threonine protein kinases; similar to Ste20p; involved in down-regulation of sterol uptake; proposed to be a downstream effector of Cdc42p during polarized growth; SKM1 has a paralog, CLA4, that arose from the whole genome duplication","termid":"PBO:0084543"}


id: FYPO:0007741
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin along the length of genes that can be transcribed by RNA polymerase II is abnormal during metaphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:33771877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein distribution along RNA polymerase II-transcribed genes","termid":"FYPO:0006020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein distribution along RNA polymerase II-transcribed genes during mitotic metaphase","synonyms":[{"name":"abnormal protein distribution across RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"},{"name":"abnormal protein distribution along RNA polymerase II-regulated genes during mitotic metaphase","type":"exact"},{"name":"abnormal protein distribution along RNA polymerase II-transcribed genes during metaphase during vegetative growth","type":"exact"},{"name":"abnormal protein distribution along RNA polymerase II-transcribed genes during metaphase of mitotic cell cycle","type":"exact"},{"name":"abnormal protein distribution in chromatin along RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"},{"name":"abnormal protein localization to chromatin along RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"}],"termid":"FYPO:0007741"}


id: PBO:0056969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 25","termid":"PBO:0056969"}


id: GO:0007017
data:
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id: GO:0030288
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner (cytoplasmic or plasma) membrane and outer membrane of organisms with two membranes such as Gram negative bacteria. These periplasmic spaces are relatively thick and contain a thin peptidoglycan layer (PGL), also referred to as a thin cell wall.","definition_xrefs":["GOC:mlg","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periplasmic space","termid":"GO:0042597"},{"relation_name":"part_of","term_name":"cell envelope","termid":"GO:0030313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"outer membrane-bounded periplasmic space","secondary_identifiers":["Wikipedia:Periplasmic_space"],"synonyms":[{"name":"outer membrane bounded periplasmic space","type":"exact"},{"name":"outer membrane-enclosed periplasmic space","type":"exact"}],"termid":"GO:0030288"}


id: GO:0000732
data:
  {"annotated_genes":["SJAG_02294"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96702],"is_not":false,"summary":null,"term":"GO:0000732"},{"annotations":[96704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902346"}]},"cv_name":"biological_process","definition":"The rejection of the broken 3' single-strand DNA molecule that formed heteroduplex DNA with its complement in an intact duplex DNA. The Watson-Crick base pairing in the original duplex is restored. The rejected 3' single-strand DNA molecule reanneals with its original complement to reform two intact duplex molecules.","definition_xrefs":["PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0008150"],"is_obsolete":false,"name":"DNA strand displacement","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"D-loop dissociation","type":"related"},{"name":"D-loop processing","type":"related"},{"name":"displacement loop dissociation","type":"related"},{"name":"displacement loop processing","type":"related"},{"name":"strand displacement","type":"exact"}],"termid":"GO:0000732","terms_by_termid":{"GO:0000732":null,"GO:1902346":null}}


id: PBO:0075984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staufen double-stranded RNA binding protein 1","termid":"PBO:0075984"}


id: PBO:0052538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 11","termid":"PBO:0052538"}


id: PBO:0045561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 10","termid":"PBO:0045561"}


id: GO:0035605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a nitric oxide (NO) group to a sulphur atom within a cysteine residue of a protein.","definition_xrefs":["PMID:20972425","GOC:sp","PMID:20972426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring nitrogenous groups","termid":"GO:0016769"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016769","GO:0003824","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"peptidyl-cysteine S-nitrosylase activity","synonyms":[{"name":"S-nitrosylase activity","type":"exact"},{"name":"protein nitrosylase activity","type":"related"}],"termid":"GO:0035605"}


id: PATO:0002070
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A molecular quality that arises from the molecular attraction exerted between two atoms or compounds.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"affinity","termid":"PATO:0002070"}


id: GO:0102037
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + 4-nitrotoluene + NADH + O2 = 4-nitrobenzyl alcohol + NAD+ + H2O.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-nitrotoluene monooxygenase activity","secondary_identifiers":["MetaCyc:R361-RXN"],"termid":"GO:0102037"}


id: GO:0046282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ester derivatives of cinnamic acid, phenylpropenoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cinnamic acid ester metabolic process","termid":"GO:0009801"},{"relation_name":"is_a","term_name":"phenylpropanoid catabolic process","termid":"GO:0046271"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"cinnamic acid ester catabolic process","synonyms":[{"name":"cinnamic acid ester breakdown","type":"exact"},{"name":"cinnamic acid ester catabolism","type":"exact"},{"name":"cinnamic acid ester degradation","type":"exact"}],"termid":"GO:0046282"}


id: PBO:0079696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like 5 pseudogene 4","termid":"PBO:0079696"}


id: PBO:0063378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosducin","termid":"PBO:0063378"}


id: PBO:0048477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosaminyl (N-acetyl) transferase 1 pseudogene 4","termid":"PBO:0048477"}


id: PBO:0001533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor Nxt2","termid":"PBO:0001533"}


id: GO:0006235
data:
  {"annotated_genes":["SJAG_04665","SJAG_04657","SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85443,88485,114091],"is_not":false,"summary":null,"term":"GO:0006235"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dTTP, deoxyribosylthymine triphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside triphosphate biosynthetic process","termid":"GO:0009212"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide biosynthetic process","termid":"GO:0009221"},{"relation_name":"is_a","term_name":"dTTP metabolic process","termid":"GO:0046075"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04627":null,"SJAG_04657":null,"SJAG_04665":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"dTTP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"dTTP anabolism","type":"exact"},{"name":"dTTP biosynthesis","type":"exact"},{"name":"dTTP formation","type":"exact"},{"name":"dTTP synthesis","type":"exact"}],"termid":"GO:0006235","terms_by_termid":{"GO:0006235":null}}


id: PBO:0004669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-ZNF_U1","termid":"PBO:0004669"}


id: PBO:0071223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 64","termid":"PBO:0071223"}


id: GO:0072221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric distal convoluted tubule over time, from its formation to the mature structure. The metanephric distal convoluted tubule is the first segment of the metanephric nephron lying just downstream from the loop of Henle, immediately after the macula densa. Among other functions, in humans it is responsible for the reabsorption of about 5% of filtered sodium via the thiazide-sensitive Na-Cl symporter.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal convoluted tubule development","termid":"GO:0072025"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"},{"relation_name":"part_of","term_name":"metanephric distal tubule development","termid":"GO:0072235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric distal convoluted tubule development","termid":"GO:0072221"}


id: GO:0005430
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of amines across synaptic vesicle membranes.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete synaptic vesicle amine transmembrane transporter activity (obsolete GO:0005430)","termid":"GO:0005430"}


id: PBO:0085035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-catalytic subunit of N-terminal acetyltransferase of the NatC type; required for replication of dsRNA virus; member of the Sm protein family","termid":"PBO:0085035"}


id: GO:0060973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another that will contribute to the progression of the heart over time, from its initial formation, to the mature organ.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in heart development","termid":"GO:0060973"}


id: GO:0160048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of fusing together the edges of a craniofacial suture.","definition_xrefs":["PMID:33842480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone morphogenesis","termid":"GO:0060349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"craniofacial suture closure","termid":"GO:0160048"}


id: GO:0097486
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the outermost membrane of a multivesicular body.","definition_xrefs":["PMID:21183070","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"late endosome lumen","termid":"GO:0031906"},{"relation_name":"part_of","term_name":"multivesicular body","termid":"GO:0005771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005768","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"multivesicular body lumen","termid":"GO:0097486"}


id: PBO:0017427
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-integral_part_of","termid":"PBO:0017427"}


id: GO:0018003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acetylation of the peptidyl-lysine of proteins to form the derivative peptidyl-N6-acetyl-L-lysine.","definition_xrefs":["RESID:AA0055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"internal peptidyl-lysine acetylation","termid":"GO:0018393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-lysine N6-acetylation","termid":"GO:0018003"}


id: PBO:0076225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT6 homolog, histone chaperone and transcription elongation factor","termid":"PBO:0076225"}


id: SO:0001530
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polypeptide region that targets a polypeptide to the lysosome.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide_localization_signal","termid":"SO:0001527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"lysosomal_localization_signal","synonyms":[{"name":"lysosomal localization signal","type":"exact"}],"termid":"SO:0001530"}


id: GO:0016258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The generation, in the Golgi apparatus, of side chain diversity from high mannose Man5GlcNAc2-Asn N-glycans by specific glycosyltransferases and glycosidases.","definition_xrefs":["ISBN:0879695595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-glycan processing","termid":"GO:0006491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-glycan diversification","termid":"GO:0016258"}


id: PBO:0044101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A9","termid":"PBO:0044101"}


id: FYPO:0001682
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity increases normally (i.e. as in wild type) as a result of a salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal alpha,alpha-trehalase activity","termid":"FYPO:0001480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal alpha,alpha-trehalase activity increase during cellular response to salt stress","synonyms":[{"name":"normal increase in trehalase activity in response to salt stress","type":"exact"},{"name":"normal neutral trehalase activity increase during cellular response to salt stress","type":"exact"},{"name":"normal trehalase activity increase during cellular response to salt stress","type":"broad"}],"termid":"FYPO:0001682"}


id: PBO:0002657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation diffusion family zinc membrane transporter Cis4","termid":"PBO:0002657"}


id: PBO:0039161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 6","termid":"PBO:0039161"}


id: FYPO:0006157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of oxidation of one or more specific proteins, or of specific protein sites is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of protein oxidation during vegetative growth","synonyms":[{"name":"increased duration of protein oxidation during mitotic cell cycle","type":"related"},{"name":"prolonged protein oxidation during vegetative growth","type":"exact"}],"termid":"FYPO:0006157"}


id: GO:1901765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phosphinothricin.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"phosphinothricin metabolic process","termid":"GO:1901764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phosphinothricin catabolic process","synonyms":[{"name":"phosphinothricin breakdown","type":"exact"},{"name":"phosphinothricin catabolism","type":"exact"},{"name":"phosphinothricin degradation","type":"exact"}],"termid":"GO:1901765"}


id: SO:0001519
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An inversion event that does not include the centromere.","direct_ancestors":[{"relation_name":"is_a","term_name":"inversion_attribute","termid":"SO:0001517"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paracentric","termid":"SO:0001519"}


id: PBO:0054409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1805","termid":"PBO:0054409"}


id: FYPO:0002605
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal at ribosomal DNA during G2 phase of the mitotic cell cycle. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation at rDNA during vegetative growth","termid":"FYPO:0002604"},{"relation_name":"is_a","term_name":"increased protein phosphorylation during mitotic G2 phase","termid":"FYPO:0004112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at rDNA during mitotic G2 phase","synonyms":[{"name":"increased histone H2A phosphorylation at rDNA during mitotic G2 phase during vegetative growth","type":"exact"},{"name":"increased histone H2A phosphorylation at ribosomal DNA during mitotic G2 phase","type":"exact"}],"termid":"FYPO:0002605"}


id: PBO:0082972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic RNA-binding protein; contains an RNA recognition motif (RRM); may have a role in mRNA translation, as suggested by genetic interactions with genes encoding proteins involved in translational initiation","termid":"PBO:0082972"}


id: PBO:0075079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 129","termid":"PBO:0075079"}


id: PBO:0054269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1655","termid":"PBO:0054269"}


id: GO:0010421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Programmed cell death induced by hydrogen peroxide. Programmed cell death is the cell death resulting from activation of endogenous cellular processes.","definition_xrefs":["PMID:16036580","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death in response to reactive oxygen species","termid":"GO:0097468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrogen peroxide-mediated programmed cell death","synonyms":[{"name":"programmed cell death in response to hydrogen peroxide","type":"exact"}],"termid":"GO:0010421"}


id: GO:0102816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + delphinidin 3-O-glucosyl-5-O-caffeoylglucoside = H+ + delphinidin 3-O-glucosyl-5-O-(caffeoylglucoside-3'-O-glucoside) + UDP.","definition_xrefs":["GOC:pz","EC:2.4.1.298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"UDP-D-glucose:delphinidin 3-O-glucosyl-5-O-caffeoylglucoside -O-beta-D-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8234","RHEA:35423"],"termid":"GO:0102816"}


id: GO:0106336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the yolk syncytial layer over time, from its initial formation to the mature structure. The yolk syncytial layer is the peripheral layer of the yolk cell including nuclei and non-yolky cytoplasm.","definition_xrefs":["PMID:29180571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"yolk syncytial layer development","synonyms":[{"name":"YSL development","type":"related"}],"termid":"GO:0106336"}


id: GO:0018859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 4-hydroxybenzoate + CoA = AMP + diphosphate + 4-hydroxybenzoyl-CoA.","definition_xrefs":["EC:6.2.1.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-hydroxybenzoate-CoA ligase activity","secondary_identifiers":["MetaCyc:4-HYDROXYBENZOATE--COA-LIGASE-RXN","KEGG_REACTION:R01300","UM-BBD_reactionID:r0156","RHEA:23116"],"synonyms":[{"name":"4-hydroxybenzoate-CoA synthetase activity","type":"related"},{"name":"4-hydroxybenzoate-coenzyme A ligase (AMP-forming)","type":"related"},{"name":"4-hydroxybenzoate:CoA ligase (AMP-forming)","type":"related"},{"name":"4-hydroxybenzoyl coenzyme A synthetase activity","type":"related"},{"name":"4-hydroxybenzoyl-CoA ligase activity","type":"related"}],"termid":"GO:0018859"}


id: PBO:0090490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein, Hsp70 family, Ssa-like","termid":"PBO:0090490"}


id: GO:0033509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutamate into other compounds, including propionate.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate catabolic process","termid":"GO:0006538"},{"relation_name":"is_a","term_name":"propionate metabolic process","termid":"GO:0019541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044248","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"glutamate catabolic process to propionate","synonyms":[{"name":"glutamate breakdown to propionate","type":"exact"},{"name":"glutamate degradation to propionate","type":"exact"}],"termid":"GO:0033509"}


id: PBO:0039315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allantoicase","termid":"PBO:0039315"}


id: FYPO:0003278
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the position, morphology, or physical characteristics of all or part of the plasma membrane is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"output_of","term_name":"abnormal plasma membrane organization","termid":"FYPO:0000813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal plasma membrane during vegetative growth","synonyms":[{"name":"abnormal plasma membrane during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003278"}


id: PR:O74843
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sif1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sad1-interacting factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.06","synonyms":[{"name":"Spom972h-sif1","type":"exact"}],"termid":"PR:O74843"}


id: PBO:0085861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the vacuole; YDL211C has a paralog, TDA7, that arose from the whole genome duplication","termid":"PBO:0085861"}


id: PBO:0082675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the EKC/KEOPS complex; EKC/KEOPS complex is required for t6A tRNA modification and telomeric TG1-3 recombination; may have role in transcription; Cgi121p is dispensable for tRNA modification; other complex members are Bud32p, Kae1p, Pcc1p, and Gon7p","termid":"PBO:0082675"}


id: FYPO:0000189
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mRNA splicing via the spliceosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA splicing","termid":"FYPO:0002915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000294","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"abnormal mRNA splicing, via spliceosome","synonyms":[{"name":"abnormal mRNA splicing, via spliceosome during mitotic cell cycle","type":"related"},{"name":"abnormal mRNA splicing, via spliceosome during vegetative growth","type":"exact"},{"name":"abnormal nuclear mRNA splicing, via spliceosome","type":"exact"}],"termid":"FYPO:0000189"}


id: PBO:0055022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2437","termid":"PBO:0055022"}


id: PBO:0074135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 34 member 3","termid":"PBO:0074135"}


id: PBO:0040192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 5","termid":"PBO:0040192"}


id: GO:0050315
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: synephrine = (4-hydroxyphenyl)acetaldehyde + methylammonium.","definition_xrefs":["EC:4.2.1.88","RHEA:32203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"synephrine dehydratase activity","secondary_identifiers":["MetaCyc:SYNEPHRINE-DEHYDRATASE-RXN","KEGG_REACTION:R03359"],"synonyms":[{"name":"1-(4-hydroxyphenyl)-2-(methylamino)ethanol hydro-lyase (methylamine-forming)","type":"related"}],"termid":"GO:0050315"}


id: PBO:0048239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 8","termid":"PBO:0048239"}


id: PATO:0002003
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that inheres in an entire population or part of a population.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"population quality","termid":"PATO:0002003"}


id: PBO:0064460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha 1, catalytic subunit","termid":"PBO:0064460"}


id: PBO:0013475
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichostatin A partially suppresses chk1delta sensitivity to UV and hydroxyurea","termid":"PBO:0013475"}


id: PBO:0013120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Dbl5","termid":"PBO:0013120"}


id: PBO:0073432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3b subunit 2","termid":"PBO:0073432"}


id: GO:1905044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Schwann cell proliferation involved in axon regeneration.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:rph","PMID:22393241","GO_REF:0000058","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Schwann cell proliferation","termid":"GO:0010624"},{"relation_name":"regulates","term_name":"Schwann cell proliferation involved in axon regeneration","termid":"GO:0014011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Schwann cell proliferation involved in axon regeneration","termid":"GO:1905044"}


id: SO:0002263
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An absolute reference to the strand. When a chromosome has p and q arms, the Crick strand is the strand whose 5'-end is on the long arm of the chromosome. Of note, the term 'minus strand' is typically based on a reference sequence where it's preferred for the minus strand to be the Crick strand, but might not be and 'minus strand' is therefore not an exact synonym.","definition_xrefs":["PMID:21303550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Crick_strand","synonyms":[{"name":"Bottom strand","type":"exact"},{"name":"Crick strand","type":"exact"},{"name":"Minus strand","type":"broad"},{"name":"Reverse strand","type":"exact"}],"termid":"SO:0002263"}


id: PBO:0004306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hira protein Slm9","termid":"PBO:0004306"}


id: PBO:0071380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 3","termid":"PBO:0071380"}


id: SO:0000150
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence obtained from a single sequencing experiment. Typically a read is produced when a base calling program interprets information from a chromatogram trace file produced from a sequencing machine.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly_component","termid":"SO:0000143"},{"relation_name":"part_of","term_name":"contig","termid":"SO:0000149"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"read","termid":"SO:0000150"}


id: GO:0097721
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A Golgi-derived vesicle to which the ciliary basal body docks via its transitional fibers. Its membrane is compositionally distinct from Golgi membranes, and will become the ciliary membrane once the ciliary vesicle is fused to the plasma membrane. The ciliary vesicle is thought to be formed by multiple smaller vesicles that attach to the transitional fibers and then fuse to form a larger vesicle.","definition_xrefs":["PMID:25686250","GOC:cilia","PMID:13978319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"ciliary vesicle","synonyms":[{"name":"CV","type":"related"},{"name":"primary ciliary vesicle","type":"exact"}],"termid":"GO:0097721"}


id: GO:0015311
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + monoamine(in) = H+(in) + monoamine(out).","definition_xrefs":["TC:2.A.1.2.11","TC:2.A.1.2.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoamine transmembrane transporter activity","termid":"GO:0008504"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"active monoatomic ion transmembrane transporter activity","termid":"GO:0022853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"monoamine:proton antiporter activity","synonyms":[{"name":"monoamine:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015311"}


id: PBO:0089899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial serine-tRNA ligase","termid":"PBO:0089899"}


id: PBO:0061569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal asparagine amidase pseudogene 3","termid":"PBO:0061569"}


id: GO:0008654
data:
  {"annotated_genes":["SJAG_03878","SJAG_04878","SJAG_02719","SJAG_00168","SJAG_04231","SJAG_00068","SJAG_02902","SJAG_00296","SJAG_06425","SJAG_00114","SJAG_02168","SJAG_01180","SJAG_03154","SJAG_05330","SJAG_04165","SJAG_01570","SJAG_05311","SJAG_04792","SJAG_03349","SJAG_05219","SJAG_01860","SJAG_01957","SJAG_03801","SJAG_04930","SJAG_03305","SJAG_01474","SJAG_04317","SJAG_02654","SJAG_04499","SJAG_02776","SJAG_01233","SJAG_00413","SJAG_02903","SJAG_02523","SJAG_02913","SJAG_06383","SJAG_05327","SJAG_04568","SJAG_05278","SJAG_00831","SJAG_03953","SJAG_04319","SJAG_02980","SJAG_00999","SJAG_04119","SJAG_01876","SJAG_04545","SJAG_04323","SJAG_02488","SJAG_00812","SJAG_01918","SJAG_01416","SJAG_01187","SJAG_01906","SJAG_01571","SJAG_01148","SJAG_02328","SJAG_01863","SJAG_04975","SJAG_03940","SJAG_03352","SJAG_03700","SJAG_04337","SJAG_00063","SJAG_04924","SJAG_03506","SJAG_02380","SJAG_03672","SJAG_03524","SJAG_02321","SJAG_04307","SJAG_00846","SJAG_04883","SJAG_00295","SJAG_01236","SJAG_00580","SJAG_03715","SJAG_01227","SJAG_00946","SJAG_02804","SJAG_00426","SJAG_04913","SJAG_04865","SJAG_01036","SJAG_01519","SJAG_00825","SJAG_03066","SJAG_04628","SJAG_04537","SJAG_02289","SJAG_03292","SJAG_04881","SJAG_03563","SJAG_03935","SJAG_03115"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69358,100930,106586,107047],"is_not":false,"summary":null,"term":"GO:0008654"},{"annotations":[88272,110010,99778,83511,87447],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016255"},{"annotations":[113923,109085,89087,102252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032049"},{"annotations":[108046,105335,60662,111826,84868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006657"},{"annotations":[102253,110743,115169,109086,99068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016024"},{"annotations":[97937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050992"},{"annotations":[113897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043048"},{"annotations":[94103,105530,90502,107368,110969,84764,95654,109811,97938,102571,92654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010142"},{"annotations":[95655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033384"},{"annotations":[105531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033386"},{"annotations":[70520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046474"},{"annotations":[104638,89584,110853,92488,94166,111282,97662,84719,99840,99106,89132,102768,94720,85616,90571,94927,87275,96354,103601,107662,108419,96289,105978,84989,89044,112210,113312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[97939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009240"},{"annotations":[84765,110970,92655,90503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019287"},{"annotations":[86794,87853,91312,91795,108597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"},{"annotations":[107433,111550],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2001211"},{"annotations":[105782,108807],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0071072"},{"annotations":[90091,91989,95809,89104,105966,87227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006654"},{"annotations":[89105,92477,90710,103447,105336,100398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006656"},{"annotations":[100399,114529,100043,90711,110746,85450,84869,92478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006646"},{"annotations":[88193,113084,103345,114887,88675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006661"},{"annotations":[89270,92762,87889,107189,114530,87269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046854"},{"annotations":[62608,61122,93655,60936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036092"},{"annotations":[110747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006659"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a phospholipid, a lipid containing phosphoric acid as a mono- or diester.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic 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id: GO:0051603
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id: PBO:0073303
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id: PBO:0087208
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id: GO:0018741
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id: PBO:0050687
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id: PBO:0090368
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id: PR:Q9P7L7
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id: PBO:0030625
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id: PBO:0030359
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id: PBO:0080847
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id: _global:results_in_transport_to_from_or_in
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id: PBO:0085682
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id: PBO:0091847
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id: GO:0010409
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id: GO:0005010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with insulin-like growth factor receptor ligand and transmitting the signal across the plasma membrane to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein tyrosine kinase activity","termid":"GO:0004714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003824","GO:0038023","GO:0140096","GO:0004672","GO:0016301","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"insulin-like growth factor receptor activity","synonyms":[{"name":"IGF receptor activity","type":"exact"},{"name":"IGF-activated receptor activity","type":"exact"},{"name":"insulin-like growth factor-activated receptor activity","type":"exact"}],"termid":"GO:0005010"}


id: PBO:0031816
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_autophagy","termid":"PBO:0031816"}


id: GO:0150071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of arginase activity.","definition_xrefs":["GOC:aruk","GOC:bc"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of arginase activity (obsolete GO:0150071)","termid":"GO:0150071"}


id: GO:0033495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ferulate, (2E)-3-(4-hydroxy-3-methoxyphenyl)prop-2-enoate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ferulate metabolic process","termid":"GO:0033494"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ferulate biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5168"],"synonyms":[{"name":"ferulate anabolism","type":"exact"},{"name":"ferulate biosynthesis","type":"exact"},{"name":"ferulate formation","type":"exact"},{"name":"ferulate synthesis","type":"exact"}],"termid":"GO:0033495"}


id: PBO:0041100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSCL2 lipid droplet biogenesis associated, seipin","termid":"PBO:0041100"}


id: PBO:0026936
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromosome","termid":"PBO:0026936"}


id: GO:0019141
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-pantolactone + NADP+ = 2-dehydropantolactone + NADPH + H+. The reaction is B-specific (i.e. the pro-S hydrogen is transferred from the 4-position of reduced nicotinamide cofactor) with respect to NADP+.","definition_xrefs":["EC:1.1.1.214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-dehydropantolactone reductase activity","termid":"GO:0036441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-dehydropantolactone reductase (B-specific) activity","secondary_identifiers":["MetaCyc:1.1.1.168-RXN"],"synonyms":[{"name":"(R)-pantolactone:NADP+ oxidoreductase (B-specific)","type":"related"},{"name":"2-dehydropantoyl-lactone reductase (B-specific) activity","type":"exact"},{"name":"2-ketopantoyl lactone reductase activity","type":"broad"},{"name":"2-oxopantoyl lactone reductase","type":"broad"},{"name":"ketopantoyl lactone reductase activity","type":"broad"}],"termid":"GO:0019141"}


id: GO:0008184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycogen + phosphate = maltodextrin + alpha-D-glucose 1-phosphate.","definition_xrefs":["MetaCyc:GLYCOPHOSPHORYL-RXN","EC:2.4.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,4-alpha-oligoglucan phosphorylase activity","termid":"GO:0004645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"glycogen phosphorylase activity","secondary_identifiers":["Reactome:R-HSA-453339","Reactome:R-HSA-453358","Reactome:R-HSA-71515","Reactome:R-HSA-71590"],"termid":"GO:0008184"}


id: PBO:0043025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 1B2, pseudogene","termid":"PBO:0043025"}


id: FYPO:0000085
data:
  {"alleles_by_uniquename":{"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01410:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01410","name":"rad51delta","uniquename":"SJAG_01410:allele-1"},"SJAG_01605:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01605","name":"rad9delta","uniquename":"SJAG_01605:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_04671:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04671","name":"mrc1delta","uniquename":"SJAG_04671:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115346],"is_not":false,"summary":null,"term":"FYPO:0000085"}],"single_locus_phenotype":[{"annotations":[115344,115345,115350,115351,115352,115673,115674,115675],"is_not":false,"summary":null,"term":"FYPO:0000085"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to camptothecin. Cells stop growing (and may die) at a concentration of camptothecin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00429":null,"SJAG_01205":null,"SJAG_01410":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_04671":null},"genotype_count":8,"genotypes_by_uniquename":{"chk1delta":{"display_name":"chk1delta","display_uniquename":"chk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]}]},"chk1delta__crb2delta":{"display_name":"chk1delta crb2delta","display_uniquename":"chk1delta__crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"crb2delta":{"display_name":"crb2delta","display_uniquename":"crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"mrc1delta":{"display_name":"mrc1delta","display_uniquename":"mrc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04671:allele-1","expression":"Null"}]}]},"rad26delta":{"display_name":"rad26delta","display_uniquename":"rad26delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00429:allele-1","expression":"Null"}]}]},"rad3delta":{"display_name":"rad3delta","display_uniquename":"rad3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00364:allele-1","expression":"Null"}]}]},"rad51delta":{"display_name":"rad51delta","display_uniquename":"rad51delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01410:allele-1","expression":"Null"}]}]},"rad9delta":{"display_name":"rad9delta","display_uniquename":"rad9delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01605:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01680","SJAG_01205"],"name":"sensitive to camptothecin","references_by_uniquename":{"PMID:20368354":null,"PMID:23090706":null},"single_locus_annotated_genes":["SJAG_01410","SJAG_00364","SJAG_00429","SJAG_01605","SJAG_01680","SJAG_04671","SJAG_01205"],"single_locus_genotype_uniquenames":["rad26delta","rad3delta","crb2delta","mrc1delta","rad9delta","rad51delta","chk1delta"],"synonyms":[{"name":"hypersensitive to camptothecin","type":"exact"},{"name":"sensitive to CPT","type":"exact"},{"name":"sensitive to camptothecin during mitotic cell cycle","type":"related"},{"name":"sensitive to camptothecin during vegetative growth","type":"exact"}],"termid":"FYPO:0000085","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000314":null,"FYPO:0000085":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0065979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleic acid export 1","termid":"PBO:0065979"}


id: PBO:0083100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-dependent ATPase that stimulates strand exchange; modifies the topology of double-stranded DNA; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; member of the SWI/SNF family of DNA translocases; forms nuclear foci upon DNA replication stress","termid":"PBO:0083100"}


id: PBO:0089438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLRC ubiquitin ligase complex subunit Raf2","termid":"PBO:0089438"}


id: GO:0060189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of protein desumoylation. Protein desumoylation is the process in which a SUMO protein (small ubiquitin-related modifier) is cleaved from its target protein.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein desumoylation","termid":"GO:0060188"},{"relation_name":"is_a","term_name":"positive regulation of protein modification by small protein conjugation or removal","termid":"GO:1903322"},{"relation_name":"positively_regulates","term_name":"protein desumoylation","termid":"GO:0016926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"positive regulation of protein desumoylation","termid":"GO:0060189"}


id: GO:0042783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which an organism avoids the effects of the host organism's immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:12439615","GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host immune response","termid":"GO:0052553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"evasion of host immune response","secondary_identifiers":["GO:0051810","GO:0051805","GO:0020012","GO:0042782","GO:0051809"],"synonyms":[{"name":"immune evasion","type":"exact"},{"name":"active evasion of host immune response","type":"related"},{"name":"active evasion of immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"active immune evasion","type":"broad"},{"name":"evasion by virus of host immune response","type":"related"},{"name":"evasion or tolerance of host immune response","type":"broad"},{"name":"mitigation by virus of host immune response","type":"related"},{"name":"mitigation of host immune response","type":"related"},{"name":"mitigation of host immune response by virus","type":"related"},{"name":"passive evasion of host immune response","type":"related"},{"name":"passive evasion of immune response of other organism involved in symbiotic interaction","type":"related"},{"name":"passive immune evasion","type":"related"},{"name":"suppression by virus of host immune response","type":"related"}],"termid":"GO:0042783"}


id: GO:0047324
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerone + phosphoenolpyruvate = glycerone phosphate + pyruvate.","definition_xrefs":["EC:2.7.1.121","RHEA:18381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphoenolpyruvate-glycerone phosphotransferase activity","secondary_identifiers":["MetaCyc:2.7.1.121-RXN","KEGG_REACTION:R01012"],"synonyms":[{"name":"phosphoenolpyruvate:glycerone phosphotransferase activity","type":"related"}],"termid":"GO:0047324"}


id: PBO:0005038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fun thirty related protein Fft2 (predicted)","termid":"PBO:0005038"}


id: FYPO:0000422
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of endocytosis is decreased. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased protein level in plasma membrane","termid":"FYPO:0003504"},{"relation_name":"is_a","term_name":"abnormal endocytosis during vegetative growth","termid":"FYPO:0000034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased endocytosis during vegetative growth","synonyms":[{"name":"decreased endocytosis during mitotic cell cycle","type":"related"},{"name":"decreased protein internalization during vegetative growth","type":"narrow"},{"name":"endocytosis: decreased during vegetative growth","type":"related"},{"name":"reduced actin-mediated endocytosis during vegetative growth","type":"exact"},{"name":"reduced endocytosis during vegetative growth","type":"exact"}],"termid":"FYPO:0000422"}


id: PBO:0063632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1 pseudogene 10","termid":"PBO:0063632"}


id: GO:0009441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycolate, the anion of hydroxyethanoic acid (glycolic acid).","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glycolate metabolic process","secondary_identifiers":["MetaCyc:GLYCOLATEMET-PWY"],"synonyms":[{"name":"glycolate metabolism","type":"exact"}],"termid":"GO:0009441"}


id: FYPO:0006319
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the extent of DNA resection upstream of a stalled replication fork is normal (i.e. indistinguishable from wild type). DNA resection is the 5'-to-3' degradation of one strand of DNA, leaving a stretch of single-stranded DNA.","definition_xrefs":["PMID:29215009","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal extent of DNA resection during replication fork processing","synonyms":[{"name":"normal DNA resectioning during replication fork processing","type":"related"},{"name":"normal extent of DNA resection during replication fork processing during mitotic cell cycle","type":"related"},{"name":"normal extent of DNA resection during replication fork processing during vegetative growth","type":"exact"},{"name":"normal extent of exonucleolytic DNA cleavage during replication fork processing","type":"exact"}],"termid":"FYPO:0006319"}


id: PBO:0044790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 3","termid":"PBO:0044790"}


id: PBO:0042327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD47 molecule","termid":"PBO:0042327"}


id: FYPO:0000084
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 6-azauracil. Cells stop growing (and may die) at a concentration of 6-azauracil that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002683","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to 6-azauracil","synonyms":[{"name":"hypersensitive to 6-azauracil","type":"exact"},{"name":"sensitive to 6-azauracil during mitotic cell cycle","type":"related"},{"name":"sensitive to 6-azauracil during vegetative growth","type":"exact"}],"termid":"FYPO:0000084"}


id: PBO:0046314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endo-beta-N-acetylglucosaminidase","termid":"PBO:0046314"}


id: GO:0071493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-B radiation stimulus. UV-B radiation (UV-B light) spans the wavelengths 280 to 315 nm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to UV-B","termid":"GO:0010224"},{"relation_name":"is_a","term_name":"cellular response to UV","termid":"GO:0034644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to UV-B","synonyms":[{"name":"cellular response to UV-B light stimulus","type":"exact"},{"name":"cellular response to UV-B radiation stimulus","type":"exact"},{"name":"cellular response to UVB light stimulus","type":"exact"},{"name":"cellular response to UVB radiation stimulus","type":"exact"},{"name":"cellular response to medium wave ultraviolet light stimulus","type":"exact"},{"name":"cellular response to medium wave ultraviolet radiation stimulus","type":"exact"}],"termid":"GO:0071493"}


id: GO:0090323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a prostaglandin that contributes to the immune response. Prostaglandins are a group of biologically active metabolites which contain a cyclopentane ring.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin secretion","termid":"GO:0032310"},{"relation_name":"part_of","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"prostaglandin secretion involved in immune response","termid":"GO:0090323"}


id: GO:1904456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neuronal action potential.","definition_xrefs":["GOC:TermGenie","PMID:25126967","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of action potential","termid":"GO:0045759"},{"relation_name":"is_a","term_name":"negative regulation of transmission of nerve impulse","termid":"GO:0051970"},{"relation_name":"is_a","term_name":"regulation of neuronal action potential","termid":"GO:0098908"},{"relation_name":"negatively_regulates","term_name":"neuronal action potential","termid":"GO:0019228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuronal action potential","synonyms":[{"name":"down regulation of generation of action potential","type":"related"},{"name":"down regulation of neuronal action potential","type":"exact"},{"name":"down-regulation of generation of action potential","type":"related"},{"name":"down-regulation of neuronal action potential","type":"exact"},{"name":"downregulation of generation of action potential","type":"related"},{"name":"downregulation of neuronal action potential","type":"exact"},{"name":"inhibition of generation of action potential","type":"related"},{"name":"inhibition of neuronal action potential","type":"narrow"},{"name":"negative regulation of generation of action potential","type":"related"}],"termid":"GO:1904456"}


id: PBO:0064683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 19","termid":"PBO:0064683"}


id: GO:0042355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-fucose (6-deoxy-Lgalactose).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucose catabolic process","termid":"GO:0019317"},{"relation_name":"is_a","term_name":"L-fucose metabolic process","termid":"GO:0042354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"L-fucose catabolic process","synonyms":[{"name":"L-fucose breakdown","type":"exact"},{"name":"L-fucose catabolism","type":"exact"},{"name":"L-fucose degradation","type":"exact"}],"termid":"GO:0042355"}


id: MOD:01921
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to D-aspartic acid.","definition_xrefs":["RESID:AA0190#ASP","ChEBI:48094","PubMed:9384562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"},{"relation_name":"is_a","term_name":"D-aspartic acid","termid":"MOD:01942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-aspartic acid (Asp)","synonyms":[{"name":"(2R)-2-aminobutanedioic acid","type":"exact"},{"name":"2-azanylbutanedioic acid","type":"exact"},{"name":"D-aspartic acid","type":"exact"},{"name":"aminosuccinic acid","type":"exact"}],"termid":"MOD:01921"}


id: PBO:0090030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex, WD repeat protein Cft1","termid":"PBO:0090030"}


id: PBO:0002624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNAJ domain protein Jac1 (predicted)","termid":"PBO:0002624"}


id: PBO:0052169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 18","termid":"PBO:0052169"}


id: PBO:0077538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 250","termid":"PBO:0077538"}


id: PBO:0062488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily B member 4","termid":"PBO:0062488"}


id: PBO:0053587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 612","termid":"PBO:0053587"}


id: PBO:0039091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine--glyoxylate aminotransferase 2","termid":"PBO:0039091"}


id: GO:0032820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of natural killer cell proliferation as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of natural killer cell proliferation","termid":"GO:0032817"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"natural killer cell proliferation involved in immune response","termid":"GO:0002324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell proliferation involved in immune response","synonyms":[{"name":"regulation of NK cell proliferation during immune response","type":"related"},{"name":"regulation of natural killer cell proliferation during immune response","type":"related"}],"termid":"GO:0032820"}


id: PBO:0065415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit beta 3 pseudogene 1","termid":"PBO:0065415"}


id: PBO:0072168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15 pseudogene 5","termid":"PBO:0072168"}


id: PBO:0070739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 9","termid":"PBO:0070739"}


id: PBO:0050591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock factor binding protein 1 pseudogene 2","termid":"PBO:0050591"}


id: GO:0030366
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the conversion of precursor Z to molybdopterin, the final step in molybdopterin biosynthesis.","definition_xrefs":["PMID:18154309","PMID:8514783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016782","GO:0003824"],"is_obsolete":false,"name":"molybdopterin synthase activity","secondary_identifiers":["EC:2.8.1.12","RHEA:26333","Reactome:R-HSA-947541"],"termid":"GO:0030366"}


id: GO:0043248
data:
  {"annotated_genes":["SJAG_02570","SJAG_04197","SJAG_04290","SJAG_00954","SJAG_01652","SJAG_04844","SJAG_04602","SJAG_00126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86015,93166,100404,110915,112412],"is_not":false,"summary":null,"term":"GO:0043248"},{"annotations":[92110,95542,111807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070682"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a mature, active proteasome complex.","definition_xrefs":["PMID:10872471","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00126":null,"SJAG_00954":null,"SJAG_01652":null,"SJAG_02570":null,"SJAG_04197":null,"SJAG_04290":null,"SJAG_04602":null,"SJAG_04844":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"proteasome assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"26S proteasome assembly","type":"narrow"},{"name":"proteasome complex assembly","type":"exact"},{"name":"proteasome maturation","type":"exact"}],"termid":"GO:0043248","terms_by_termid":{"GO:0043248":null,"GO:0070682":null}}


id: PBO:0067467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 596, pseudogene","termid":"PBO:0067467"}


id: FYPO:0006413
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more histone RNAs measured in a cell is higher than normal (i.e. lower than observed in wild-type cells). Histone RNAs are transcribed from genes encoding histones.","definition_xrefs":["PMID:17452352","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased level of histone gene mRNA during vegetative growth","synonyms":[{"name":"increased histone gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of histone gene RNA during vegetative growth","type":"exact"},{"name":"increased level of histone gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of histone gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0006413"}


id: PR:Q9P3E4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC750.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3E4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized GPI-anchored protein SPAC750.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC750.07c","synonyms":[{"name":"Spom972h-SPAC750.07c","type":"exact"}],"termid":"PR:Q9P3E4"}


id: PBO:0043176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIR1 pseudogene 3","termid":"PBO:0043176"}


id: PBO:0049211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor NMDA type subunit 3A","termid":"PBO:0049211"}


id: GO:0021571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 5 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:jid","GOC:cls","GOC:curators","GOC:dgh","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 5 development","termid":"GO:0021571"}


id: PBO:0076186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO1 pseudogene 1","termid":"PBO:0076186"}


id: PBO:0031242
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mRNA_splicing,_via_spliceosome","termid":"PBO:0031242"}


id: PR:P04688
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nda2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P04688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha-1 chain (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.15c","synonyms":[{"name":"Spom972h-nda2","type":"exact"}],"termid":"PR:P04688"}


id: PR:Q09150
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 61 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03420","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.02","secondary_identifiers":["UniProtKB:Q09150"],"synonyms":[{"name":"Spom972h-WDR61","type":"exact"}],"termid":"PR:Q09150"}


id: PBO:0004397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Ste13","termid":"PBO:0004397"}


id: GO:0014803
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers of the longitudinal sarcoplasmic reticulum envelope. The longitudinal sarcoplasmic reticulum lumen is continuous with the lumen contained within the terminal cisternae.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoplasmic reticulum lumen","termid":"GO:0033018"},{"relation_name":"part_of","term_name":"longitudinal sarcoplasmic reticulum","termid":"GO:0014801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005783","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"longitudinal sarcoplasmic reticulum lumen","termid":"GO:0014803"}


id: GO:0046792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Viral interference in host cell processes that lead cell cycle arrest, allowing cell division to occur.","definition_xrefs":["PMID:9371605"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host cell cycle arrest (obsolete GO:0046792)","synonyms":[{"name":"negative regulation by virus of cell cycle arrest","type":"exact"},{"name":"viral inhibition of cell cycle arrest","type":"exact"}],"termid":"GO:0046792"}


id: PBO:0077132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIPARP antisense RNA 1","termid":"PBO:0077132"}


id: PR:Q1MTP1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- iss9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q1MTP1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THP3 homolog C2A9.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.11c","synonyms":[{"name":"Spom972h-iss9","type":"exact"}],"termid":"PR:Q1MTP1"}


id: PBO:0053362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 269","termid":"PBO:0053362"}


id: FYPO:0006848
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of RNA measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"decreased total RNA level during vegetative growth","synonyms":[{"name":"decreased total RNA accumulation during vegetative growth","type":"related"},{"name":"decreased total RNA content during vegetative growth","type":"exact"},{"name":"decreased total RNA level during mitotic cell cycle","type":"related"},{"name":"reduced total RNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0006848"}


id: FYPO:0005762
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which homocitrate synthase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal homocitrate synthase activity","termid":"FYPO:0001750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000654","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"abolished homocitrate synthase activity","synonyms":[{"name":"homocitrate synthase activity abolished","type":"exact"}],"termid":"FYPO:0005762"}


id: GO:0022408
data:
  {"annotated_genes":["SJAG_03473","SJAG_01778","SJAG_00156","SJAG_00926"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94639,95353],"is_not":false,"summary":null,"term":"GO:0022408"},{"annotations":[102298,99620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060257"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of cell adhesion to another cell.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell adhesion","termid":"GO:0007162"},{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"negatively_regulates","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00156":null,"SJAG_00926":null,"SJAG_01778":null,"SJAG_03473":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of cell-cell adhesion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cell-cell adhesion","type":"exact"},{"name":"down-regulation of cell-cell adhesion","type":"exact"},{"name":"downregulation of cell-cell adhesion","type":"exact"},{"name":"inhibition of cell-cell adhesion","type":"narrow"}],"termid":"GO:0022408","terms_by_termid":{"GO:0022408":null,"GO:0060257":null}}


id: PBO:0043367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collectrin, amino acid transport regulator","termid":"PBO:0043367"}


id: GO:0047806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H2 + ferricytochrome c3 = 4 H+ + ferrocytochrome c3.","definition_xrefs":["MetaCyc:CYTOCHROME-C3-HYDROGENASE-RXN","EC:1.12.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor, cytochrome as acceptor","termid":"GO:0016697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cytochrome-c3 hydrogenase activity","secondary_identifiers":["RHEA:20625"],"synonyms":[{"name":"H(2):ferricytochrome c3 oxidoreductase activity","type":"related"},{"name":"H2:ferricytochrome c3 oxidoreductase activity","type":"related"},{"name":"cytochrome c3 reductase activity","type":"related"},{"name":"cytochrome hydrogenase activity","type":"broad"},{"name":"hydrogen:ferricytochrome-c3 oxidoreductase activity","type":"related"}],"termid":"GO:0047806"}


id: GO:0097657
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',5'-nucleoside bisphosphate + H20 = 5'-nucleoside monophosphate + phosphate.","definition_xrefs":["RHEA:43532","GOC:jh2","PMID:24401123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"3',5'-nucleotide bisphosphate phosphatase activity","secondary_identifiers":["EC:3.1.3.97"],"termid":"GO:0097657"}


id: GO:0099038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the movement of ceramide from the cytosolic to the exoplasmic leaftlet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["GOC:dos","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingolipid floppase activity","termid":"GO:0046623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140303","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ceramide floppase activity","synonyms":[{"name":"ATP-dependent ceramide transporter activity","type":"broad"},{"name":"ATPase-coupled ceramide transporter activity","type":"broad"},{"name":"ceramide floppase activity (cytosolic to exoplasmic leaftlet)","type":"exact"},{"name":"ceramide-translocating ATPase activity","type":"broad"}],"termid":"GO:0099038"}


id: GO:0008423
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the inactivation of bleomycin B2 (a cytotoxic glycometallopeptide) by hydrolysis of a peptide bond of beta-aminoalanine, but also shows general aminopeptidase activity. The specificity varies somewhat with source, but amino acid arylamides of Met, Leu and Ala are preferred.","definition_xrefs":["EC:3.4.22.40"],"gene_count":0,"genotype_count":0,"name":"obsolete bleomycin hydrolase activity (obsolete GO:0008423)","synonyms":[{"name":"aminopeptidase C (Lactococcus lactis)","type":"narrow"},{"name":"bleomycin hydrolase activity","type":"exact"}],"termid":"GO:0008423"}


id: PBO:0039539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 36C","termid":"PBO:0039539"}


id: PBO:0071331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 8","termid":"PBO:0071331"}


id: GO:0031048
data:
  {"annotated_genes":["SJAG_04061","SJAG_04369","SJAG_01579","SJAG_02817","SJAG_03916","SJAG_02621","SJAG_04030","SJAG_02119","SJAG_00087","SJAG_00414","SJAG_03356","SJAG_00058","SJAG_02908","SJAG_01331","SJAG_00701","SJAG_03635","SJAG_02725","SJAG_03042","SJAG_00756","SJAG_04141","SJAG_01836","SJAG_03664","SJAG_04574","SJAG_01008","SJAG_03193","SJAG_01540","SJAG_02594","SJAG_03689","SJAG_03680","SJAG_01601","SJAG_04253","SJAG_02409"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95621,100158,103407,103837,105172,107923,109126,109736,110635,114049,114158],"is_not":false,"summary":null,"term":"GO:0031048"},{"annotations":[104544],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0060906"},{"annotations":[113825],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010964"},{"annotations":[102354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902795"},{"annotations":[110061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141194"},{"annotations":[95625,106715,110374,102594,114882,92797,106544,110636,91398,87324,84843,109738,95192,111493,84898,108273,114050,114161,107270,113770,112057,90153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140727"}]},"cv_name":"biological_process","definition":"A heterochromatin formation-based gene silencing process mediated by a regulatory non-coding RNA molecule that occur before the beginning of trancription.","definition_xrefs":["PMID:19239886","PMID:21420348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA-mediated gene silencing","termid":"GO:0031047"},{"relation_name":"is_a","term_name":"heterochromatin formation","termid":"GO:0031507"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00087":null,"SJAG_00414":null,"SJAG_00701":null,"SJAG_00756":null,"SJAG_01008":null,"SJAG_01331":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01601":null,"SJAG_01836":null,"SJAG_02119":null,"SJAG_02409":null,"SJAG_02594":null,"SJAG_02621":null,"SJAG_02725":null,"SJAG_02817":null,"SJAG_02908":null,"SJAG_03042":null,"SJAG_03193":null,"SJAG_03356":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03680":null,"SJAG_03689":null,"SJAG_03916":null,"SJAG_04030":null,"SJAG_04061":null,"SJAG_04141":null,"SJAG_04253":null,"SJAG_04369":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"regulatory ncRNA-mediated heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0070924","GO:0140458"],"synonyms":[{"name":"RNA interference-like chromatin silencing","type":"exact"},{"name":"RNA-dependent heterochromatin formation","type":"exact"},{"name":"RNA-mediated TGS","type":"broad"},{"name":"RNA-mediated chromatin silencing","type":"exact"},{"name":"RNA-mediated heterochromatin formation","type":"related"},{"name":"RNA-mediated transcriptional silencing","type":"exact"},{"name":"RNAi-directed chromatin silencing","type":"exact"},{"name":"RNAi-like chromatin silencing","type":"exact"},{"name":"chromatin silencing by small RNA","type":"related"},{"name":"heterochromatin assembly by small RNA","type":"narrow"},{"name":"heterochromatin assembly involved in chromatin silencing by small RNA","type":"related"},{"name":"heterochromatin formation involved in chromatin silencing by small RNA","type":"related"},{"name":"ncRNA-mediated heterochromatin formation","type":"exact"},{"name":"pre-transcriptional gene silencing by RNA","type":"broad"},{"name":"pre-transcriptional gene silencing by small non-coding RNA","type":"narrow"},{"name":"small RNA-mediated heterochromatic silencing","type":"narrow"},{"name":"small RNA-mediated heterochromatin formation","type":"narrow"},{"name":"small ncRNA-mediated heterochromatin formation","type":"narrow"},{"name":"small non-coding RNA-dependent heterochromatin formation","type":"narrow"}],"termid":"GO:0031048","terms_by_termid":{"GO:0010964":null,"GO:0031048":null,"GO:0060906":null,"GO:0140727":null,"GO:0141194":null,"GO:1902795":null}}


id: PBO:0043593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XXIII alpha 1 chain","termid":"PBO:0043593"}


id: PBO:0046686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein subunit alpha","termid":"PBO:0046686"}


id: PBO:0090594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L58","termid":"PBO:0090594"}


id: GO:0009002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (Ac)2-L-Lys-D-alanyl-D-alanine + H2O = (Ac)2-L-Lys-D-alanine + D-alanine.","definition_xrefs":["EC:3.4.16.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine-type carboxypeptidase activity","termid":"GO:0004185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0008233","GO:0140096","GO:0016787"],"is_obsolete":false,"name":"serine-type D-Ala-D-Ala carboxypeptidase activity","secondary_identifiers":["MetaCyc:3.4.16.4-RXN"],"synonyms":[{"name":"D-alanine carboxypeptidase","type":"broad"},{"name":"D-alanyl carboxypeptidase activity","type":"related"},{"name":"D-alanyl-D-alanine carboxypeptidase activity","type":"related"},{"name":"D-alanyl-D-alanine-carboxypeptidase activity","type":"related"},{"name":"D-alanyl-D-alanine-cleaving peptidase activity","type":"related"},{"name":"D-alanyl-D-alanine-cleaving-peptidase activity","type":"related"},{"name":"DD-carboxypeptidase","type":"broad"},{"name":"DD-peptidase activity","type":"related"},{"name":"DD-transpeptidase activity","type":"related"}],"termid":"GO:0009002"}


id: PBO:0003214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT organizer Mto2","termid":"PBO:0003214"}


id: FYPO:0006966
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of acetyl-CoA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular acetyl-CoA level","synonyms":[{"name":"increased acetyl-CoA accumulation","type":"related"},{"name":"increased cellular acetyl-CoA level during mitotic cell cycle","type":"related"},{"name":"increased cellular acetyl-CoA level during vegetative growth","type":"exact"}],"termid":"FYPO:0006966"}


id: PBO:0070771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 1","termid":"PBO:0070771"}


id: GO:0060888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The pattern specification process that results in the subdivision of the epidermis of the limb in space to define a volume in which specific patterns of basal cell, spinous cell and granular cells will differentiate giving rise to the layers of the limb epidermis.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"limb epidermis development","termid":"GO:0060887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"limb epidermis stratification","termid":"GO:0060888"}


id: FYPO:0009029
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing arginine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0002058","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"increased cell population growth on arginine nitrogen source","synonyms":[{"name":"increased growth on arginine nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on arginine nitrogen source","type":"exact"}],"termid":"FYPO:0009029"}


id: RO:0003311
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a condition (a phenotype or disease) and an entity (e.g. a chemical, environmental exposure, or some form of genetic variation) where some or all aspects of the condition are worsened by the presence of the entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"RO:0002410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condition_exacerbated_by","termid":"RO:0003311"}


id: PBO:0081238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 7","termid":"PBO:0081238"}


id: PBO:0065069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prickle planar cell polarity protein 1","termid":"PBO:0065069"}


id: PBO:0090330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxycytidylate deaminase","termid":"PBO:0090330"}


id: PBO:0062578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily G member 2","termid":"PBO:0062578"}


id: PBO:0064331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid scramblase 1","termid":"PBO:0064331"}


id: PBO:0040735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCR pseudogene 1","termid":"PBO:0040735"}


id: PBO:0055265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2692","termid":"PBO:0055265"}


id: SO:0000835
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A part of a primary transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_region","termid":"SO:0000833"},{"relation_name":"part_of","term_name":"primary_transcript","termid":"SO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary_transcript_region","synonyms":[{"name":"primary transcript region","type":"exact"}],"termid":"SO:0000835"}


id: PBO:0072413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 18","termid":"PBO:0072413"}


id: PBO:0089919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phoshorylceramide synthase regulatory subunit Kei1","termid":"PBO:0089919"}


id: PBO:0057426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548z","termid":"PBO:0057426"}


id: PBO:0086972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of dolichyl phosphate mannose (DPM) synthase; identified based on comparisons of the genome sequences of six Saccharomyces species; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the endoplasmic reticulum","termid":"PBO:0086972"}


id: PATO:0001480
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's resembling a sponge in elasticity, absorbency, or porousness.","definition_xrefs":["Answers.com:Answers.com"],"direct_ancestors":[{"relation_name":"has_part","term_name":"permeable","termid":"PATO:0000982"},{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spongy","termid":"PATO:0001480"}


id: PBO:0045313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNPEP antisense RNA 1","termid":"PBO:0045313"}


id: PBO:0068333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 40","termid":"PBO:0068333"}


id: PBO:0016572
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RPC40","termid":"PBO:0016572"}


id: GO:0110056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of actin filament annealing, i.e. the end-to-end joining of existing actin filaments.","definition_xrefs":["PMID:11575927","PMID:10585915","PMID:19244341","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament annealing","termid":"GO:0110054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"positive regulation of actin filament annealing","termid":"GO:0110056"}


id: PBO:0074924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 92","termid":"PBO:0074924"}


id: PBO:0027096
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_number_of_Rad52_foci_at_highly_transcribed_protein-coding_genes","termid":"PBO:0027096"}


id: GO:1902009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of toxin transport.","definition_xrefs":["PMID:22792315","GOC:dph","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of toxin transport (obsolete GO:1902009)","synonyms":[{"name":"activation of toxin transport","type":"narrow"},{"name":"up regulation of toxin transport","type":"exact"},{"name":"up-regulation of toxin transport","type":"exact"},{"name":"upregulation of toxin transport","type":"exact"}],"termid":"GO:1902009"}


id: PBO:0045571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 21","termid":"PBO:0045571"}


id: PBO:0060068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 15","termid":"PBO:0060068"}


id: RO:HOM0000022
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Paralogy that results from a whole genome duplication event.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_paralogy_relationship_with","termid":"RO:HOM0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_ohnology_relationship_with","synonyms":[{"name":"homoeology","type":"related"},{"name":"ohnologous to","type":"exact"}],"termid":"RO:HOM0000022"}


id: PBO:0040727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 associated transcription factor 1 pseudogene 2","termid":"PBO:0040727"}


id: PBO:0066608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhox homeobox family member 1","termid":"PBO:0066608"}


id: PBO:0066472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger and FYVE like domain containing E3 ubiquitin protein ligase","termid":"PBO:0066472"}


id: PBO:0039061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiogenic factor with G-patch and FHA domains 1 pseudogene 10","termid":"PBO:0039061"}


id: GO:1900136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chemokine activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine activity","termid":"GO:0060300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of chemokine activity","termid":"GO:1900136"}


id: MOD:00441
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a geranylgeranyl group.","definition_xrefs":["PubMed:15609361","Unimod:48","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenylated residue","termid":"MOD:00703"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geranylgeranylated residue","synonyms":[{"name":"Geranyl-geranyl","type":"related"},{"name":"GeranylGeranyl","type":"related"},{"name":"Geranylgeranylation","type":"exact"},{"name":"GergerRes","type":"exact"}],"termid":"MOD:00441"}


id: GO:0002190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process where translation initiation recruits the 40S ribosomal subunits in a Cap and 5' end independent fashion before an AUG codon is encountered in an appropriate sequence context to initiate mRNA or circRNA translation.","definition_xrefs":["PMID:17284590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic translational initiation","termid":"GO:0002183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0002181"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0002181"],"is_obsolete":false,"name":"cap-independent translational initiation","termid":"GO:0002190"}


id: FYPO:0002504
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the palmitoylation of one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification","termid":"FYPO:0002497"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation","termid":"FYPO:0002503"},{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0002494","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"abolished protein palmitoylation","synonyms":[{"name":"protein palmitoylation abolished","type":"exact"},{"name":"protein palmitoylation absent","type":"exact"}],"termid":"FYPO:0002504"}


id: PBO:0059410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS35 divergent transcript","termid":"PBO:0059410"}


id: PBO:0068933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 176, pseudogene","termid":"PBO:0068933"}


id: PBO:0048786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha 15","termid":"PBO:0048786"}


id: GO:1903086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of sinapate ester biosynthesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11080161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of sinapate ester biosynthetic process","termid":"GO:1903085"},{"relation_name":"negatively_regulates","term_name":"sinapate ester biosynthetic process","termid":"GO:0033525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of sinapate ester biosynthetic process","synonyms":[{"name":"down regulation of sinapate ester anabolism","type":"exact"},{"name":"down regulation of sinapate ester biosynthesis","type":"exact"},{"name":"down regulation of sinapate ester biosynthetic process","type":"exact"},{"name":"down regulation of sinapate ester formation","type":"exact"},{"name":"down regulation of sinapate ester synthesis","type":"exact"},{"name":"down-regulation of sinapate ester anabolism","type":"exact"},{"name":"down-regulation of sinapate ester biosynthesis","type":"exact"},{"name":"down-regulation of sinapate ester biosynthetic process","type":"exact"},{"name":"down-regulation of sinapate ester formation","type":"exact"},{"name":"down-regulation of sinapate ester synthesis","type":"exact"},{"name":"downregulation of sinapate ester anabolism","type":"exact"},{"name":"downregulation of sinapate ester biosynthesis","type":"exact"},{"name":"downregulation of sinapate ester biosynthetic process","type":"exact"},{"name":"downregulation of sinapate ester formation","type":"exact"},{"name":"downregulation of sinapate ester synthesis","type":"exact"},{"name":"inhibition of sinapate ester anabolism","type":"narrow"},{"name":"inhibition of sinapate ester biosynthesis","type":"narrow"},{"name":"inhibition of sinapate ester biosynthetic process","type":"narrow"},{"name":"inhibition of sinapate ester formation","type":"narrow"},{"name":"inhibition of sinapate ester synthesis","type":"narrow"},{"name":"negative regulation of sinapate ester anabolism","type":"exact"},{"name":"negative regulation of sinapate ester biosynthesis","type":"exact"},{"name":"negative regulation of sinapate ester formation","type":"exact"},{"name":"negative regulation of sinapate ester synthesis","type":"exact"}],"termid":"GO:1903086"}


id: GO:0106015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the inflammatory response to wounding.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","PMID:26022821","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of inflammatory response","termid":"GO:0050728"},{"relation_name":"is_a","term_name":"regulation of inflammatory response to wounding","termid":"GO:0106014"},{"relation_name":"is_a","term_name":"negative regulation of response to wounding","termid":"GO:1903035"},{"relation_name":"negatively_regulates","term_name":"inflammatory response to wounding","termid":"GO:0090594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of inflammatory response to wounding","termid":"GO:0106015"}


id: RO:0002209
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of parasitoid of","direct_ancestors":[{"relation_name":"is_a","term_name":"parasitized_by","termid":"RO:0002445"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_parasitoid","termid":"RO:0002209"}


id: GO:0002508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction in the central lymphoid organs: the thymus and bone marrow.","definition_xrefs":["ISBN:0781735149","GOC:jal","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central tolerance induction","termid":"GO:0002508"}


id: GO:0018737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-ketocyclohexane-1-carboxyl-CoA + H2O = pimeloyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-ketocyclohexane-1-carboxyl-CoA hydrolase activity (obsolete GO:0018737)","termid":"GO:0018737"}


id: GO:0051561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the concentration of calcium ions in mitochondria.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial calcium ion homeostasis","termid":"GO:0051560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"positive regulation of mitochondrial calcium ion concentration","synonyms":[{"name":"elevation of calcium ion concentration in mitochondria","type":"exact"},{"name":"elevation of calcium ion concentration in mitochondrion","type":"exact"},{"name":"elevation of mitochondrial calcium ion concentration","type":"exact"},{"name":"mitochondrial calcium ion concentration elevation","type":"exact"}],"termid":"GO:0051561"}


id: PBO:0090498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer beta' subunit","termid":"PBO:0090498"}


id: _global:regulates_level_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"p regulates levels of c if p regulates some amount (PATO:0000070) of c","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_levels_of","secondary_identifiers":["RO:0002332","GOREL:0000036"],"termid":"_global:regulates_level_of"}


id: PBO:0072094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 25","termid":"PBO:0072094"}


id: GO:0072199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal cell proliferation that contributes to the progression of the ureter gland over time. A mesenchymal cell is a cell that normally gives rise to other cells that are organized as three-dimensional masses, rather than sheets.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation","termid":"GO:0010464"},{"relation_name":"regulates","term_name":"mesenchymal cell proliferation involved in ureter development","termid":"GO:0072198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell proliferation involved in ureter development","synonyms":[{"name":"regulation of ureter mesenchymal cell proliferation","type":"related"},{"name":"regulation of ureteral mesenchymal cell proliferation","type":"related"}],"termid":"GO:0072199"}


id: PR:Q10276
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eki1 gene.","definition_xrefs":["PRO:DAN","UniProtKB:Q10276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline kinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.12c","synonyms":[{"name":"Spom972h-eki1 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:Q10276"}


id: PATO:0002352
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's upper parts die back to the rootstock at the end of the growing season.","definition_xrefs":["PATOC:PG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shedability","termid":"PATO:0001729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"herbaceous","termid":"PATO:0002352"}


id: PBO:0007356
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA trimethylguanosine capped","termid":"PBO:0007356"}


id: PBO:0083574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF YHR073W; identified by expression profiling and mass spectrometry","termid":"PBO:0083574"}


id: GO:0006296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The endonucleolytic cleavage of the damaged strand of DNA 5' to the site of damage. The incision occurs at the junction of single-stranded DNA and double-stranded DNA that is formed when the DNA duplex is unwound. The incision follows the incision formed 3' to the site of damage.","definition_xrefs":["GOC:elh","PMID:10197977"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide-excision repair, DNA incision, 5'-to lesion (obsolete GO:0006296)","synonyms":[{"name":"nucleotide-excision repair, DNA incision, 5' to lesion","type":"exact"}],"termid":"GO:0006296"}


id: GO:0090228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the red or far-red signaling pathway, the series of molecular signals initiated upon sensing by photoreceptor molecules of red light or far red light.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of red or far-red light signaling pathway","termid":"GO:0090227"},{"relation_name":"positively_regulates","term_name":"red or far-red light signaling pathway","termid":"GO:0010017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of red or far-red light signaling pathway","synonyms":[{"name":"positive regulation of phytochrome signaling pathway","type":"exact"},{"name":"positive regulation of red or far-red light signalling pathway","type":"exact"}],"termid":"GO:0090228"}


id: GO:0060414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of the smooth muscle tissue surrounding the aorta is generated and organized. An aorta is an artery that carries blood from the heart to other parts of the body.","definition_xrefs":["GOC:bf","Wikipedia:Aorta","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle tissue morphogenesis","termid":"GO:0060415"},{"relation_name":"part_of","term_name":"aorta morphogenesis","termid":"GO:0035909"},{"relation_name":"part_of","term_name":"smooth muscle tissue development","termid":"GO:0048745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aorta smooth muscle tissue morphogenesis","termid":"GO:0060414"}


id: PBO:0024809
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causally_influences","termid":"PBO:0024809"}


id: PBO:0090894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGEF for Rho1 Rgf2","termid":"PBO:0090894"}


id: PBO:0059635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 1","termid":"PBO:0059635"}


id: GO:0009927
data:
  {"annotated_genes":["SJAG_06592","SJAG_00331"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76613,107887],"is_not":false,"summary":null,"term":"GO:0009927"}]},"cv_name":"molecular_function","definition":"Serves as a phospho-His intermediate enabling the transfer of phospho group between a hybrid kinase and a response regulator.","definition_xrefs":["PMID:11842140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"},{"relation_name":"is_a","term_name":"molecular transducer activity","termid":"GO:0060089"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00331":null,"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0016301","GO:0140096","GO:0003674","GO:0004672","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"histidine phosphotransfer kinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0009927","terms_by_termid":{"GO:0009927":null}}


id: PBO:0078085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex 2 pseudogene 2","termid":"PBO:0078085"}


id: PBO:0057334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 521-1","termid":"PBO:0057334"}


id: PBO:0076993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 8","termid":"PBO:0076993"}


id: GO:0044231
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized area of membrane of the host axon terminal that faces the plasma membrane of the host neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many host synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"},{"relation_name":"part_of","term_name":"host cell membrane","termid":"GO:0033644"},{"relation_name":"part_of","term_name":"host cell synapse","termid":"GO:0044221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell presynaptic membrane","secondary_identifiers":["GO:0072556"],"synonyms":[{"name":"host cell pre-synaptic membrane","type":"exact"},{"name":"other organism pre-synaptic membrane","type":"related"},{"name":"other organism presynaptic membrane","type":"related"}],"termid":"GO:0044231"}


id: PBO:0054170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1543","termid":"PBO:0054170"}


id: GO:0070902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The intramolecular conversion of uridine to pseudouridine in a mitochondrial tRNA molecule.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA pseudouridine synthesis","termid":"GO:0031119"},{"relation_name":"is_a","term_name":"mitochondrial tRNA modification","termid":"GO:0070900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0140053","GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"mitochondrial tRNA pseudouridine synthesis","termid":"GO:0070902"}


id: GO:0035422
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of the inactive enzyme MAP kinase kinase kinase in the context of an innate immune response, a defense response mediated by germline encoded components that directly recognize components of potential pathogens.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKKK activity involved in innate immune response (obsolete GO:0035422)","termid":"GO:0035422"}


id: GO:0033000
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of an Fc-gamma RI alpha chain and an Fc-epsilon RI gamma chain dimer with or without additional signaling components. The complex functions primarily as an activating receptor for IgG.","definition_xrefs":["GOC:add","PMID:12413532","ISBN:0781735149","PMID:11244038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fc receptor complex","termid":"GO:0032997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Fc-gamma receptor I complex","synonyms":[{"name":"FcgRI complex","type":"exact"},{"name":"IgG receptor complex","type":"broad"},{"name":"immunoglobulin G receptor complex","type":"broad"}],"termid":"GO:0033000"}


id: GO:1905808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synapse pruning.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:27779093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of synapse pruning","termid":"GO:1905806"},{"relation_name":"positively_regulates","term_name":"synapse pruning","termid":"GO:0098883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of synapse pruning","synonyms":[{"name":"activation of synapse disassembly","type":"narrow"},{"name":"regulation of synapse clearance","type":"broad"},{"name":"regulation of synapse disassembly","type":"broad"},{"name":"regulation of synapse elimination","type":"broad"},{"name":"regulation of synapse removal","type":"broad"},{"name":"up regulation of synapse disassembly","type":"exact"},{"name":"up-regulation of synapse disassembly","type":"exact"},{"name":"upregulation of synapse disassembly","type":"exact"}],"termid":"GO:1905808"}


id: GO:0032837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets during a normally chiasmate meiosis under the condition that chiasma have not occurred between a particular pair of homologs. Distributive segregation is a backup mechanism to ensure the segregation of homologs that have failed to cross over - either as a consequence of mutation or not, as, for example, the 4th chromosome of Drosophila melanogaster (which never exchanges, presumably due to its small size) - but nevertheless segregate normally.","definition_xrefs":["GOC:sart","GOC:expert_rsh","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome segregation","termid":"GO:0045132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"distributive segregation","termid":"GO:0032837"}


id: PBO:0084619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methionine aminopeptidase; catalyzes the cotranslational removal of N-terminal methionine from nascent polypeptides; function is partially redundant with that of Map1p","termid":"PBO:0084619"}


id: PBO:0029176
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_peptide-serine-N-acetyltransferase_activity","termid":"PBO:0029176"}


id: FYPO:0002837
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small interfering RNA transcripts derived from the centromere outer repeat region measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal centromeric outer repeat transcript level","termid":"FYPO:0002567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal centromeric outer repeat transcript-derived siRNA level","synonyms":[{"name":"normal accumulation of centromeric outer repeat transcript-derived siRNA","type":"related"},{"name":"normal accumulation of centromeric outer repeat transcript-derived siRNA during vegetative growth","type":"related"},{"name":"normal accumulation of siRNAs homologous to outer repeats","type":"related"},{"name":"normal centromeric outer repeat transcript-derived siRNA level during mitotic cell cycle","type":"related"},{"name":"normal centromeric outer repeat transcript-derived siRNA level during vegetative growth","type":"exact"},{"name":"normal level of siRNAs homologous to outer repeats","type":"exact"}],"termid":"FYPO:0002837"}


id: GO:0001081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of one nitrogen source leads to a decrease in the frequency, rate, or extent of transcription, from an RNA polymerase II promoter, of specific genes involved in the metabolism of other nitrogen sources.","definition_xrefs":["GOC:mah","GOC:txnOH","PMID:19104072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen catabolite regulation of transcription from RNA polymerase II promoter","termid":"GO:0001079"},{"relation_name":"is_a","term_name":"nitrogen catabolite repression of transcription","termid":"GO:0090295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006355","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"nitrogen catabolite repression of transcription from RNA polymerase II promoter","synonyms":[{"name":"negative regulation of transcription from RNA polymerase II promoter by nitrogen catabolites","type":"exact"}],"termid":"GO:0001081"}


id: GO:0033632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of cell-cell adhesion mediated by integrin.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"is_a","term_name":"regulation of cell adhesion mediated by integrin","termid":"GO:0033628"},{"relation_name":"regulates","term_name":"cell-cell adhesion mediated by integrin","termid":"GO:0033631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of cell-cell adhesion mediated by integrin","synonyms":[{"name":"regulation of cell-cell adhesion mediated by integrin complex","type":"exact"}],"termid":"GO:0033632"}


id: PBO:0018003
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Km of ATP for ATPase activity 110 uM","termid":"PBO:0018003"}


id: PR:Q9UT50
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slf1 gene.","definition_xrefs":["UniProtKB:Q9UT50","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C821.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC821.03c","synonyms":[{"name":"Spom972h-slf1","type":"exact"}],"termid":"PR:Q9UT50"}


id: PBO:0014244
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Overexpressed in BFA Resistant strains","termid":"PBO:0014244"}


id: GO:0051765
data:
  {"annotated_genes":["SJAG_03409"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000825"},{"annotations":[94856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047326"},{"annotations":[94857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000824"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol tetrakisphosphate + ATP = inositol pentakisphosphate + ADP.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"inositol phosphate kinase activity","termid":"GO:0180030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03409":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"inositol tetrakisphosphate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051765","terms_by_termid":{"GO:0000824":null,"GO:0000825":null,"GO:0047326":null}}


id: GO:0140673
data:
  {"annotated_genes":["SJAG_00925","SJAG_03128","SJAG_04257","SJAG_02873","SJAG_02416","SJAG_04038","SJAG_00320","SJAG_02698","SJAG_00914","SJAG_04670","SJAG_02319","SJAG_03006","SJAG_00913","SJAG_02314","SJAG_00293"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86128,87291,88427,89442,90669,91543,99629,104830,104835,107334,109673,110611,112288,112984,114909],"is_not":false,"summary":null,"term":"GO:0140673"}]},"cv_name":"biological_process","definition":"A chromatin remodeling process that reestablishes the chromatin structure following the passage of RNA polymerase II during transcription elongation, thus preventing cryptic transcription initiation.","definition_xrefs":["PMID:22922743","PMID:28053344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin remodeling","termid":"GO:0006338"},{"relation_name":"part_of","term_name":"transcription elongation by RNA polymerase II","termid":"GO:0006368"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00320":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_02314":null,"SJAG_02319":null,"SJAG_02416":null,"SJAG_02698":null,"SJAG_02873":null,"SJAG_03006":null,"SJAG_03128":null,"SJAG_04038":null,"SJAG_04257":null,"SJAG_04670":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006325","GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"transcription elongation-coupled chromatin remodeling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA replication-independent chromatin organization","type":"related"},{"name":"chromatin maintenance during transcription elongation","type":"related"},{"name":"co-transcriptional chromatin reassembly","type":"exact"},{"name":"euchromatin maintenance during transcription elongation","type":"exact"},{"name":"maintenance of chromatin integrity during transcription elongation by RNAPII","type":"exact"},{"name":"maintenance of transcriptionally active chromatin during transcription elongation","type":"exact"},{"name":"transciptional elongation-coupled chromatin remodeling","type":"exact"},{"name":"transcription elongation coupled chromatin remodeling","type":"exact"},{"name":"transcriptional elongation-coupled chromatin remodeling","type":"exact"}],"termid":"GO:0140673","terms_by_termid":{"GO:0140673":null}}


id: PBO:0043992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate N-acetylgalactosaminyltransferase 2","termid":"PBO:0043992"}


id: MOD:01413
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to a trihydroxylated leucine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trihydroxylated residue","termid":"MOD:01409"},{"relation_name":"is_a","term_name":"hydroxylated leucine","termid":"MOD:01410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trihydroxylated leucine","synonyms":[{"name":"Hy3Leu","type":"exact"}],"termid":"MOD:01413"}


id: PBO:0000320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S19 (predicted)","termid":"PBO:0000320"}


id: PBO:0047019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A22","termid":"PBO:0047019"}


id: PATO:0001992
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An organismal quality inhering in a bearer by virtue of the bearer's consisting cells.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organismal quality","termid":"PATO:0001995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellularity","termid":"PATO:0001992"}


id: PBO:0090074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding splicing factor Ntr1","termid":"PBO:0090074"}


id: PBO:0064119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 1, transient receptor potential channel interacting pseudogene 6","termid":"PBO:0064119"}


id: GO:1901741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myoblast fusion.","definition_xrefs":["GOC:BHF","PMID:21364645","GOC:TermGenie","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of syncytium formation by plasma membrane fusion","termid":"GO:0060143"},{"relation_name":"is_a","term_name":"regulation of myoblast fusion","termid":"GO:1901739"},{"relation_name":"positively_regulates","term_name":"myoblast fusion","termid":"GO:0007520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myoblast fusion","synonyms":[{"name":"activation of myoblast fusion","type":"narrow"},{"name":"up regulation of myoblast fusion","type":"exact"},{"name":"up-regulation of myoblast fusion","type":"exact"},{"name":"upregulation of myoblast fusion","type":"exact"}],"termid":"GO:1901741"}


id: PBO:0049943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIC ZBTB transcriptional repressor 1","termid":"PBO:0049943"}


id: GO:0150102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of monocyte activation.","definition_xrefs":["GOC:aruk","PMID:15597323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte activation","termid":"GO:0002695"},{"relation_name":"negatively_regulates","term_name":"monocyte activation","termid":"GO:0042117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of monocyte activation","synonyms":[{"name":"repression of monocyte activation","type":"exact"}],"termid":"GO:0150102"}


id: FYPO:0001377
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in a cell during a cellular response to salt stress is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular calcium level","termid":"FYPO:0001197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular calcium level during cellular response to salt stress","synonyms":[{"name":"decreased calcium accumulation during cellular response to salt stress","type":"related"},{"name":"decreased cellular calcium ion level during cellular response to salt stress","type":"exact"},{"name":"decreased cellular calcium level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"decreased cellular calcium level during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"reduced cellular calcium level during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0001377"}


id: FYPO:0004299
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which polynucleotide 5'-phosphatase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal polynucleotide 5'-phosphatase activity","termid":"FYPO:0004298"},{"relation_name":"is_a","term_name":"abolished phosphatase activity","termid":"FYPO:0004303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"abolished polynucleotide 5'-phosphatase activity","synonyms":[{"name":"polynucleotide 5'-phosphatase activity abolished","type":"exact"}],"termid":"FYPO:0004299"}


id: FYPO:0006430
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, and contains a single nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"has_part","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable mononucleate vegetative cell","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"inviable mononucleate cell during vegetative growth","type":"exact"}],"termid":"FYPO:0006430","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0061382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 42","termid":"PBO:0061382"}


id: GO:0039645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with the normal execution of the host cell G1/S transition checkpoint. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["VZ:880","PMID:24501404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cell cycle progression","termid":"GO:0044071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host cell cycle G1/S transition checkpoint","synonyms":[{"name":"G1/S host cell cycle checkpoint dysregulation by virus","type":"exact"},{"name":"modulation by virus of host G1/S transition checkpoint","type":"related"},{"name":"perturbation by virus of host G1/S transition checkpoint","type":"narrow"}],"termid":"GO:0039645"}


id: GO:0050344
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-cinnamate + H+ + NADPH + O2 = 2-coumarate + H2O + NADP+.","definition_xrefs":["RHEA:10956","EC:1.14.13.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"trans-cinnamate 2-monooxygenase activity","secondary_identifiers":["MetaCyc:TRANS-CINNAMATE-2-MONOOXYGENASE-RXN","KEGG_REACTION:R02254"],"synonyms":[{"name":"cinnamate 2-hydroxylase activity","type":"related"},{"name":"cinnamate 2-monooxygenase activity","type":"related"},{"name":"cinnamic 2-hydroxylase activity","type":"related"},{"name":"cinnamic acid 2-hydroxylase activity","type":"related"},{"name":"trans-cinnamate,NADPH:oxygen oxidoreductase (2-hydroxylating)","type":"related"},{"name":"trans-cinnamic acid 2-hydroxylase activity","type":"exact"}],"termid":"GO:0050344"}


id: PBO:0064580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member B2","termid":"PBO:0064580"}


id: GO:0002911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of lymphocyte anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"regulates","term_name":"lymphocyte anergy","termid":"GO:0002249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphocyte anergy","termid":"GO:0002911"}


id: PBO:0039941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-rich interaction domain 3B","termid":"PBO:0039941"}


id: PBO:0067549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 698, pseudogene","termid":"PBO:0067549"}


id: PBO:0060693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A3 pseudogene 1","termid":"PBO:0060693"}


id: PBO:0087554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNase MRP, nuclear RNase P and telomerase complexes; RNase MRP cleaves pre-rRNA, nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs, while telomerase replenishes telomeric DNA; binds to the RPR1 RNA subunit in RNase P","termid":"PBO:0087554"}


id: MOD:01772
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The palmityl cation protein modification reporter fragment produced by fragmentation of some palmitoyl modified residues.","definition_xrefs":["PubMed:18688235","PubMed:8413602"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"palmitoylated residue","termid":"MOD:00440"},{"relation_name":"is_a","term_name":"modification reporter fragment","termid":"MOD:01520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmityl reporter fragment","synonyms":[{"name":"Pam+","type":"exact"},{"name":"palmityl cation","type":"related"}],"termid":"MOD:01772"}


id: GO:0021957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Generation of a long process of a pyramidal cell, that carries efferent (outgoing) action potentials from the cell body in cerebral cortex layer V towards target cells in the gray matter of the spinal cord. This axonal process is a member of those that make up the corticospinal tract.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","PMID:9878731","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system projection neuron axonogenesis","termid":"GO:0021952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corticospinal tract morphogenesis","synonyms":[{"name":"CST axonogenesis","type":"exact"},{"name":"corticospinal tract axonogenesis","type":"exact"}],"termid":"GO:0021957"}


id: PBO:0091131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H Rnh1","termid":"PBO:0091131"}


id: GO:0047416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-acetylarylalkylamine = acetate + arylalkylamine.","definition_xrefs":["MetaCyc:3.5.1.76-RXN","EC:3.5.1.76"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"arylalkyl acylamidase activity","secondary_identifiers":["RHEA:10352"],"synonyms":[{"name":"N-acetylarylalkylamine amidohydrolase activity","type":"related"},{"name":"aralkyl acylamidase activity","type":"related"}],"termid":"GO:0047416"}


id: PBO:0038916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADGRF5 antisense RNA 1","termid":"PBO:0038916"}


id: GO:0075098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism stops, prevents, or reduces the frequency, rate or extent of the symbiont signal transduction mediated by G-protein gamma subunit. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont signal transduction mediated by G-protein gamma subunit (obsolete GO:0075098)","termid":"GO:0075098"}


id: PBO:0088343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phosphatidic acid transfer protein Ups1","termid":"PBO:0088343"}


id: PBO:0026926
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_serine_phosphorylation_at_RxxS_site","termid":"PBO:0026926"}


id: GO:0043058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the speed, mechanical force, or rhythm of the posterior movement of an organism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of locomotion","termid":"GO:0040012"},{"relation_name":"regulates","term_name":"backward locomotion","termid":"GO:0043057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of backward locomotion","termid":"GO:0043058"}


id: PBO:0045643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 1","termid":"PBO:0045643"}


id: PBO:0058564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6506","termid":"PBO:0058564"}


id: PBO:0082662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the cleavage and polyadenylation factor I (CF I); CF 1, composed of the CF 1A complex (Rna14p, Rna15p, Clp1p, Pcf11p) and Hrp1, is involved in cleavage and polyadenylation of mRNA 3' ends; interacts with the A-rich polyadenylation signal in complex with Rna14p and Hrp1p; mutant displays reduced transcription elongation in the G-less-based run-on (GLRO) assay; required for gene looping and maintenance of genome stability","termid":"PBO:0082662"}


id: GO:0018102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydroxylation of peptidyl-arginine to form peptidyl-4-hydroxy-L-arginine.","definition_xrefs":["RESID:AA0215"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-arginine hydroxylation to peptidyl-4-hydroxy-L-arginine (obsolete GO:0018102)","termid":"GO:0018102"}


id: PBO:0067127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 173, pseudogene","termid":"PBO:0067127"}


id: PBO:0053522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 517","termid":"PBO:0053522"}


id: FYPO:0004811
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the termination of transcription by RNA polymerase II is abnormal. Termination of all transcripts, or a subset of transcripts, may be affected.","definition_xrefs":["GO:0006369","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription termination","termid":"FYPO:0003556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000294","FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal termination of RNA polymerase II transcription","synonyms":[{"name":"abnormal RNA polymerase II transcription termination","type":"exact"},{"name":"abnormal termination of RNA polymerase II transcription during mitotic cell cycle","type":"related"},{"name":"abnormal termination of RNA polymerase II transcription during vegetative growth","type":"exact"}],"termid":"FYPO:0004811"}


id: PBO:0061939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily N member 2","termid":"PBO:0061939"}


id: GO:0007531
data:
  {"annotated_genes":["SJAG_05239","SJAG_00757","SJAG_03997","SJAG_02556","SJAG_02226","SJAG_03097","SJAG_01601","SJAG_01113","SJAG_02724","SJAG_01677","SJAG_01410","SJAG_00399","SJAG_01465","SJAG_00073","SJAG_02401","SJAG_02828","SJAG_06638","SJAG_01076","SJAG_01495","SJAG_02460","SJAG_01419","SJAG_02319","SJAG_02079","SJAG_00247","SJAG_05153","SJAG_01068","SJAG_03221"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103102,115151,115152],"is_not":false,"summary":null,"term":"GO:0007531"},{"annotations":[83999,95182,112930,114907],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007535"},{"annotations":[102678,112882,93491,95183,85355,92236,84000,111088,106354,102112,96639,106878,85228,114826,104567],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007534"},{"annotations":[92237,92715,95185,95120,106879,88721,114827,106355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007533"},{"annotations":[99288,104568,90139,99019],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071515"},{"annotations":[89405],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071171"}]},"cv_name":"biological_process","definition":"Any process that establishes and transmits the specification of mating type upon an individual. Mating types are the equivalent in microorganisms of the sexes in higher organisms.","definition_xrefs":["PMID:33313646","PMID:8274857","PMID:8785123","PMID:28916791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex determination","termid":"GO:0007530"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00073":null,"SJAG_00247":null,"SJAG_00399":null,"SJAG_00757":null,"SJAG_01068":null,"SJAG_01076":null,"SJAG_01113":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01465":null,"SJAG_01495":null,"SJAG_01601":null,"SJAG_01677":null,"SJAG_02079":null,"SJAG_02226":null,"SJAG_02319":null,"SJAG_02401":null,"SJAG_02460":null,"SJAG_02556":null,"SJAG_02724":null,"SJAG_02828":null,"SJAG_03097":null,"SJAG_03221":null,"SJAG_03997":null,"SJAG_05153":null,"SJAG_05239":null,"SJAG_06638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mating type determination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0007531","terms_by_termid":{"GO:0007531":null,"GO:0007533":null,"GO:0007534":null,"GO:0007535":null,"GO:0071171":null,"GO:0071515":null}}


id: FYPO:0006528
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of hydrolysis of peptide bonds within a protein is decreased during the meiotic cell cycle. All proteolysis may be affected, or only cleavage of specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased proteolysis","termid":"FYPO:0006527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"decreased proteolysis during meiotic cell cycle","synonyms":[{"name":"decreased peptidolysis during meiotic cell cycle","type":"exact"},{"name":"decreased protein cleavage during meiotic cell cycle","type":"related"},{"name":"reduced proteolysis during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006528"}


id: PBO:0075815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scavenger receptor cysteine rich family member with 4 domains","termid":"PBO:0075815"}


id: GO:0075053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly by the symbiont of a peg-like structure for the purpose of penetration into its host organism, which penetrates through the host cuticle and epidermal cell wall. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators","PMID:26441323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of infection structure","termid":"GO:0075015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"penetration peg formation","secondary_identifiers":["GO:0075057"],"synonyms":[{"name":"formation of symbiont penetration peg for entry into host","type":"related"},{"name":"initiation of symbiont penetration peg","type":"narrow"},{"name":"symbiont penetration peg formation for entry into host","type":"related"},{"name":"symbiont penetration peg initiation","type":"narrow"}],"termid":"GO:0075053"}


id: PBO:0058245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4533","termid":"PBO:0058245"}


id: PBO:0067570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 725, pseudogene","termid":"PBO:0067570"}


id: GO:0000711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"During meiosis, the synthesis of DNA proceeding from the broken 3' single-strand DNA end that uses the homologous intact duplex as the template.","definition_xrefs":["PMID:9334324","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA synthesis involved in DNA repair","termid":"GO:0000731"},{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"meiotic DNA repair synthesis","termid":"GO:0000711"}


id: PR:O59856
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl33 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L33, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.08c","synonyms":[{"name":"Spom972h-mrpl33","type":"exact"}],"termid":"PR:O59856"}


id: PBO:0034548
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_protein_degradation","termid":"PBO:0034548"}


id: PBO:0044096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A4","termid":"PBO:0044096"}


id: GO:2000508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dendritic cell chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte chemotaxis","termid":"GO:0002688"},{"relation_name":"is_a","term_name":"regulation of mononuclear cell migration","termid":"GO:0071675"},{"relation_name":"regulates","term_name":"dendritic cell chemotaxis","termid":"GO:0002407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dendritic cell chemotaxis","termid":"GO:2000508"}


id: PBO:0001515
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ipc Mannosyl-Transferase homologue","termid":"PBO:0001515"}


id: PBO:0027357
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_generation_of_precursor_metabolites_and_energy_gene_mRNA_during_vegetative_growth","termid":"PBO:0027357"}


id: GO:0061308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a cardiac neural crest cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell that contributes to the development of the heart.","definition_xrefs":["GOC:mtg_heart","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural crest cell development","termid":"GO:0014032"},{"relation_name":"part_of","term_name":"cardiac neural crest cell differentiation involved in heart development","termid":"GO:0061307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac neural crest cell development involved in heart development","termid":"GO:0061308"}


id: GO:0097309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Methylation of the ribose of the first nucleotide of a 5'-capped mRNA.","definition_xrefs":["PMID:20713356","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete cap1 mRNA methylation (obsolete GO:0097309)","synonyms":[{"name":"cap1 mRNA capping","type":"broad"}],"termid":"GO:0097309"}


id: PBO:0000538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lon protease homolog Lon1 (predicted)","termid":"PBO:0000538"}


id: PBO:0071135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 137","termid":"PBO:0071135"}


id: PBO:0041023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family B member 6","termid":"PBO:0041023"}


id: PBO:0082985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic aldehyde dehydrogenase; activated by Mg2+ and utilizes NADP+ as the preferred coenzyme; required for conversion of acetaldehyde to acetate; constitutively expressed; locates to the mitochondrial outer surface upon oxidative stress","termid":"PBO:0082985"}


id: PBO:0087037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L18A; intron of RPL18A pre-mRNA forms stem-loop structures that are a target for Rnt1p cleavage leading to degradation; homologous to mammalian ribosomal protein L18, no bacterial homolog; RPL18A has a paralog, RPL18B, that arose from the whole genome duplication","termid":"PBO:0087037"}


id: GO:0090263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the Wnt signaling pathway through beta-catenin, the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of Wnt signaling pathway","termid":"GO:0030177"},{"relation_name":"is_a","term_name":"regulation of canonical Wnt signaling pathway","termid":"GO:0060828"},{"relation_name":"positively_regulates","term_name":"canonical Wnt signaling pathway","termid":"GO:0060070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of canonical Wnt signaling pathway","secondary_identifiers":["GO:0035413"],"synonyms":[{"name":"positive regulation of Wnt receptor signaling pathway through beta-catenin","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signaling pathway","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signalling pathway","type":"exact"},{"name":"positive regulation of canonical Wnt-activated signaling pathway","type":"exact"},{"name":"positive regulation of catenin import into nucleus","type":"narrow"},{"name":"positive regulation of catenin protein nuclear translocation","type":"narrow"}],"termid":"GO:0090263"}


id: GO:0042890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of 3-phenylpropionic acid from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-phenylpropionic acid transmembrane transporter activity (obsolete GO:0042890)","synonyms":[{"name":"3-phenylpropionate acid transporter activity","type":"exact"},{"name":"HCA transporter activity","type":"exact"},{"name":"hydrocinnamic acid transporter activity","type":"exact"}],"termid":"GO:0042890"}


id: PBO:0044584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysbindin domain containing 2","termid":"PBO:0044584"}


id: GO:0018710
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetone + ATP + CO2 + 2 H2O = acetoacetate + AMP + 4 H+ + 2 phosphate.","definition_xrefs":["RHEA:18385","EC:6.4.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-carbon bonds","termid":"GO:0016885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"acetone carboxylase activity","secondary_identifiers":["MetaCyc:6.4.1.6-RXN","KEGG_REACTION:R05735"],"synonyms":[{"name":"acetone:carbon-dioxide ligase (AMP-forming)","type":"related"}],"termid":"GO:0018710"}


id: PBO:0045963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"egl-9 family hypoxia inducible factor 2","termid":"PBO:0045963"}


id: GO:0140576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of ascorbate at the level of a cell.","definition_xrefs":["PMID:1623014","PMID:32547589","PMID:17068337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical homeostasis","termid":"GO:0048878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ascorbate homeostasis","synonyms":[{"name":"cellular ascorbate homeostasis","type":"narrow"}],"termid":"GO:0140576"}


id: PBO:0081232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MYND-type containing 12","termid":"PBO:0081232"}


id: PBO:0090562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein, disaggregase Hsp104","termid":"PBO:0090562"}


id: GO:0141119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that maintains methylated cytosine in newly synthesized DNA following DNA replication. After the establishment of novel DNA methylation marks, the newly created patterns must be faithfully transmitted by maintenance DNA methyltransferases during cell division.","definition_xrefs":["PMID:20142834","PMID:34968368","PMID:11005794","PMID:26077819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0006325"],"is_obsolete":false,"name":"chromosomal DNA methylation maintenance following DNA replication","synonyms":[{"name":"DNA methylation","type":"broad"},{"name":"DNA methylation maintenance","type":"broad"},{"name":"DNA methylation maintenance following DNA replication","type":"exact"},{"name":"DNA methylation maintenance following cell division","type":"exact"},{"name":"genome methylation maintenance following DNA replication","type":"exact"}],"termid":"GO:0141119"}


id: FYPO:0006131
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of gluconate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular gluconate level","synonyms":[{"name":"increased cellular gluconate level during mitotic cell cycle","type":"related"},{"name":"increased cellular gluconate level during vegetative growth","type":"exact"},{"name":"increased gluconate accumulation","type":"related"}],"termid":"FYPO:0006131"}


id: PBO:0053370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 293","termid":"PBO:0053370"}


id: GO:0031897
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The translocon of the inner envelope of chloroplasts, which facilitates the import of proteins across the chloroplast inner membrane.","definition_xrefs":["PMID:12180471","PMID:12393016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"chloroplast inner membrane","termid":"GO:0009706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Tic complex","synonyms":[{"name":"chloroplast inner membrane translocase complex","type":"exact"}],"termid":"GO:0031897"}


id: PBO:0072761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A12","termid":"PBO:0072761"}


id: GO:0016694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete bacterial catalase-peroxidase activity (obsolete GO:0016694)","synonyms":[{"name":"bacterial catalase-peroxidase activity","type":"exact"}],"termid":"GO:0016694"}


id: PBO:0074838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 32A","termid":"PBO:0074838"}


id: PBO:0003730
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stability regulated by oxygen","termid":"PBO:0003730"}


id: PBO:0030302
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_activation_of_bipolar_cell_growth","termid":"PBO:0030302"}


id: PBO:0078069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 59 (non-functional)","termid":"PBO:0078069"}


id: PBO:0087454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a complex with Ctf8p and Ctf18p; shares some components with Replication Factor C; required for sister chromatid cohesion and telomere length maintenance","termid":"PBO:0087454"}


