# terms

id: GO:0061825
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The F-actin-rich core of an adhesion structure characterized by formation upon cell substrate contact and localization at the substrate-attached part of the cell.","definition_xrefs":["PMID:23158496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"podosome","termid":"GO:0002102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015629","GO:0005575"],"is_obsolete":false,"name":"podosome core","termid":"GO:0061825"}


id: GO:0052064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by a symbiont of the production of reactive oxygen species as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:30823485"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated activation of reactive oxygen species production in host cell (obsolete GO:0052064)","synonyms":[{"name":"activation by symbiont of defense-related host ROI production","type":"exact"},{"name":"activation by symbiont of defense-related host ROS production","type":"exact"},{"name":"activation by symbiont of defense-related host metabolic burst","type":"exact"},{"name":"activation by symbiont of defense-related host oxidative burst","type":"exact"},{"name":"activation by symbiont of defense-related host reactive oxidative species production","type":"exact"},{"name":"activation by symbiont of defense-related host reactive oxygen intermediate production","type":"exact"},{"name":"activation by symbiont of defense-related host reactive oxygen species production","type":"exact"},{"name":"activation by symbiont of defense-related host respiratory burst","type":"exact"},{"name":"induction by organism of defense-related reactive oxygen species production in other organism involved in symbiotic interaction","type":"broad"},{"name":"induction by symbiont of defense-related host AOS production","type":"exact"},{"name":"induction by symbiont of defense-related host active oxygen species production","type":"exact"},{"name":"induction by symbiont of defense-related host metabolic burst","type":"exact"},{"name":"induction by symbiont of defense-related host oxidative burst","type":"exact"},{"name":"induction by symbiont of defense-related host reactive oxidative species production","type":"exact"},{"name":"induction by symbiont of defense-related host reactive oxygen species production","type":"related"},{"name":"induction by symbiont of defense-related reactive oxygen species production in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by organism of defense-related reactive oxygen species production in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of defense-related host reactive oxygen species production","type":"related"},{"name":"stimulation by symbiont of defense-related host reactive oxygen species production","type":"related"},{"name":"up regulation by symbiont of defense-related host reactive oxygen species production","type":"related"},{"name":"up-regulation by symbiont of defense-related host reactive oxygen species production","type":"related"},{"name":"upregulation by symbiont of defense-related host reactive oxygen species production","type":"related"}],"termid":"GO:0052064"}


id: GO:2000733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation","termid":"GO:2000701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation","synonyms":[{"name":"regulation of GDNF receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"regulation of glial cell derived neurotrophic factor receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"regulation of glial cell line-derived neurotrophic factor receptor signalling pathway of ureteric bud formation","type":"exact"},{"name":"regulation of glial cell-derived neurotrophic factor receptor signaling pathway of ureteric bud formation","type":"exact"},{"name":"regulation of glial cell-derived neurotrophic factor receptor signalling pathway of ureteric bud formation","type":"exact"}],"termid":"GO:2000733"}


id: PBO:0070096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 10 pseudogene","termid":"PBO:0070096"}


id: FYPO:0001929
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to hydroxyurea is normal (i.e. indistinguishable from wild type). Normally, cell cycle progression is slowed or arrested transiently following exposure to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to hydroxyurea","termid":"FYPO:0001926"},{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000298","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal cell cycle regulation during cellular response to hydroxyurea","synonyms":[{"name":"normal cell cycle arrest in response to HU","type":"narrow"},{"name":"normal cell cycle delay following hydroxyurea exposure","type":"narrow"},{"name":"normal cell cycle regulation during cellular response to HU","type":"exact"},{"name":"normal cell cycle regulation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"normal cell cycle regulation during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"normal cell cycle regulation in response to hydroxyurea","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0001929"}


id: PBO:0051607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 31 receptor A","termid":"PBO:0051607"}


id: GO:0046354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mannan, the main hemicellulose of soft (coniferous) wood, made up of D-mannose, D-glucose and D-galactose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannan metabolic process","termid":"GO:0010412"},{"relation_name":"is_a","term_name":"cell wall polysaccharide biosynthetic process","termid":"GO:0070592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0071554","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"mannan biosynthetic process","synonyms":[{"name":"mannan anabolism","type":"exact"},{"name":"mannan biosynthesis","type":"exact"},{"name":"mannan formation","type":"exact"},{"name":"mannan synthesis","type":"exact"}],"termid":"GO:0046354"}


id: PBO:0081990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 20","termid":"PBO:0081990"}


id: PR:O94365
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U3 small nucleolar RNA-associated protein 15 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02472","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.19c","secondary_identifiers":["UniProtKB:O94365"],"synonyms":[{"name":"Spom972h-UTP15","type":"exact"},{"name":"U3 protein 15 required for transcription (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein 15 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94365"}


id: PBO:0060839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofilament heavy chain","termid":"PBO:0060839"}


id: GO:0030972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The proteolytic degradation of proteins in the cytosol that contributes to apoptosis.","definition_xrefs":["ISBN:0815332181","GOC:mtg_apoptosis","GOC:dph","GOC:mah","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete cleavage of cytosolic proteins involved in execution phase of apoptosis (obsolete GO:0030972)","synonyms":[{"name":"apoptotic cleavage of cytosolic proteins","type":"exact"},{"name":"cleavage of cytosolic proteins involved in apoptosis","type":"broad"},{"name":"cleavage of cytosolic proteins involved in execution phase of apoptosis","type":"exact"}],"termid":"GO:0030972"}


id: GO:0090684
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A non-GPCR transmembrane signaling receptor activity that is responsible for contact chemoreception.","definition_xrefs":["GOC:hat","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taste receptor activity","termid":"GO:0008527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"contact chemoreceptor activity","synonyms":[{"name":"contact chemosensation receptor activity","type":"exact"}],"termid":"GO:0090684"}


id: FYPO:0005200
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype in which a vegetative cell is inviable and elongated during a cellular response to ultraviolet light.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable elongated vegetative cell during cellular response to UV (obsolete FYPO:0005200)","synonyms":[{"name":"elongated inviable cell during cellular response to UV during vegetative growth","type":"exact"},{"name":"elongated inviable vegetative cell during cellular response to UV","type":"exact"},{"name":"inviable elongated vegetative cell during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"inviable elongated vegetative cell during cellular response to ultraviolet light","type":"exact"},{"name":"lethal; elongated vegetative cell during cellular response to UV","type":"exact"}],"termid":"FYPO:0005200"}


id: MOD:00897
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to N-acetyl-S-archeol-L-cysteine.","definition_xrefs":["RESID:AA0043#var","RESID:AA0223#var"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"N-acetyl-L-cysteine","termid":"MOD:00052"},{"relation_name":"has_functional_parent","term_name":"S-diphytanylglycerol diether-L-cysteine","termid":"MOD:00228"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyl-S-archeol-cysteine","termid":"MOD:00897"}


id: GO:0009340
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric enzyme, which in most bacterial species is composed of two subunits, ParC and ParE. Functions in chromosome segregation and can relax supercoiled DNA.","definition_xrefs":["PMID:7783632","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex","termid":"GO:0009330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA topoisomerase IV complex","termid":"GO:0009340"}


id: GO:0033934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-alpha-D-glucosidic linkages in amylaceous polysaccharides, to remove successive maltotriose residues from the non-reducing chain ends.","definition_xrefs":["EC:3.2.1.116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"glucan 1,4-alpha-maltotriohydrolase activity","secondary_identifiers":["MetaCyc:3.2.1.116-RXN"],"synonyms":[{"name":"1,4-alpha-D-glucan maltotriohydrolase activity","type":"related"},{"name":"exo-maltotriohydrolase activity","type":"related"},{"name":"maltotriohydrolase activity","type":"related"}],"termid":"GO:0033934"}


id: PBO:0030050
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ferric-chelate_reductase_activity","termid":"PBO:0030050"}


id: PBO:0049891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERC2 pseudogene 10","termid":"PBO:0049891"}


id: GO:0045200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of the apicobasal polarity of a neuroblast cell, a progenitor of the central nervous system.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of cell polarity","termid":"GO:0030010"},{"relation_name":"is_a","term_name":"establishment or maintenance of neuroblast polarity","termid":"GO:0045196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of neuroblast polarity","secondary_identifiers":["GO:0043343","GO:0043340"],"synonyms":[{"name":"establishment of neuroblast cell polarity","type":"exact"}],"termid":"GO:0045200"}


id: PBO:0064083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PISRT1 lncRNA","termid":"PBO:0064083"}


id: PR:Q9USM8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg20 gene.","definition_xrefs":["UniProtKB:Q9USM8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.08","synonyms":[{"name":"Spom972h-atg20","type":"exact"}],"termid":"PR:Q9USM8"}


id: PBO:0066002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RALGAPA1 pseudogene 1","termid":"PBO:0066002"}


id: GO:0018507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3S,4R)-3,4-dihydrophenanthrene-3,4-diol + NAD+ = H+ + NADH + phenanthrene-3,4-diol.","definition_xrefs":["RHEA:16253","EC:1.3.1.49"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cis-3,4-dihydrophenanthrene-3,4-diol dehydrogenase activity","secondary_identifiers":["MetaCyc:1.3.1.49-RXN","KEGG_REACTION:R04151","UM-BBD_reactionID:r0488"],"synonyms":[{"name":"(+)-cis-3,4-dihydrophenanthrene-3,4-diol:NAD+ 3,4-oxidoreductase activity","type":"related"},{"name":"cis-3,4-dihydroxy-3,4-dihydrophenanthrene dehydrogenase activity","type":"exact"}],"termid":"GO:0018507"}


id: GO:0102865
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a gamma-linolenoyl-[glycerolipid] + 2 ferrocytochrome b5 + O2 + 2 H+ = a (9Z,12Z)-octadeca-9,12-dien-6-ynoyl-[glycerolipid] + 2 ferricytochrome b5 + 2 H2O.","definition_xrefs":["PMID:10848999","GOC:pz","RHEA:46536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"delta6-acyl-lipid desaturase activity","secondary_identifiers":["EC:1.14.19.38","MetaCyc:RXN-8343"],"termid":"GO:0102865"}


id: PBO:0049898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERPUD family member 2","termid":"PBO:0049898"}


id: GO:0090029
data:
  {"annotated_genes":["SJAG_00990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89374],"is_not":false,"summary":null,"term":"GO:0090029"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of pheromone-dependent signal transduction during conjugation with cellular fusion, a signal transduction process resulting in the relay, amplification or dampening of a signal generated in response to pheromone exposure in organisms that undergo conjugation with cellular fusion.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pheromone-dependent signal transduction involved in conjugation with cellular fusion","termid":"GO:0010969"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction involved in conjugation with cellular fusion","termid":"GO:0060240"},{"relation_name":"negatively_regulates","term_name":"pheromone-dependent signal transduction involved in conjugation with cellular fusion","termid":"GO:0000750"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0023052","GO:0000747","GO:0008150"],"is_obsolete":false,"name":"negative regulation of pheromone-dependent signal transduction involved in conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090029","terms_by_termid":{"GO:0090029":null}}


id: MOD:00955
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-serine residue and an L-histidine residue to release water and form tele- or pros-(2-amino-2-carboxyethyl)histidine.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-histidine residue","termid":"MOD:02048"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alaninohistidine (serine crosslinked to tele or pros nitrogen of histidine)","synonyms":[{"name":"beta-alaninohistidine","type":"exact"}],"termid":"MOD:00955"}


id: PBO:0063996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 30","termid":"PBO:0063996"}


id: PBO:0059880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 3","termid":"PBO:0059880"}


id: PBO:0090053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane LMBR1-like multi-pass membrane protein, human LMBRD2 ortholog, implicated in signalling","termid":"PBO:0090053"}


id: PBO:0051242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-60-1 (pseudogene)","termid":"PBO:0051242"}


id: GO:0034427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of the mRNA transcript body that occurs when the 3' end is not protected by a 3'-poly(A) tail; degradation proceeds in the 3' to 5' direction.","definition_xrefs":["GOC:mah","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' (obsolete GO:0034427)","termid":"GO:0034427"}


id: PBO:0108945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spi-C transcription factor pseudogene 2","termid":"PBO:0108945"}


id: GO:0039584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host protein kinase activity.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host protein kinase activity (obsolete GO:0039584)","termid":"GO:0039584"}


id: GO:0052439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the deposition of callose by the symbiont in its cell walls, occurring as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of defense-related symbiont cell wall callose deposition (obsolete GO:0052439)","synonyms":[{"name":"modulation by organism of defense-related symbiont cell wall callose deposition","type":"exact"}],"termid":"GO:0052439"}


id: GO:0045588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gamma-delta T cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell differentiation","termid":"GO:0045582"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell differentiation","termid":"GO:0045586"},{"relation_name":"is_a","term_name":"positive regulation of gamma-delta T cell activation","termid":"GO:0046645"},{"relation_name":"positively_regulates","term_name":"gamma-delta T cell differentiation","termid":"GO:0042492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of gamma-delta T cell differentiation","synonyms":[{"name":"activation of gamma-delta T cell differentiation","type":"narrow"},{"name":"positive regulation of gamma-delta T cell development","type":"related"},{"name":"positive regulation of gamma-delta T lymphocyte differentiation","type":"exact"},{"name":"positive regulation of gamma-delta T-cell differentiation","type":"exact"},{"name":"positive regulation of gamma-delta T-lymphocyte differentiation","type":"exact"},{"name":"stimulation of gamma-delta T cell differentiation","type":"narrow"},{"name":"up regulation of gamma-delta T cell differentiation","type":"exact"},{"name":"up-regulation of gamma-delta T cell differentiation","type":"exact"},{"name":"upregulation of gamma-delta T cell differentiation","type":"exact"}],"termid":"GO:0045588"}


id: PBO:0048402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAS6 divergent transcript","termid":"PBO:0048402"}


id: GO:0032867
data:
  {"annotated_genes":["SJAG_03958","SJAG_04660"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91817,97242],"is_not":false,"summary":null,"term":"GO:0032867"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabitol + NADP+ = L-arabinose + NADPH + H+.","definition_xrefs":["RHEA:25229","PMID:12724380","PMID:15184173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldose reductase (NADPH) activity","termid":"GO:0004032"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03958":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"L-arabinose reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-8772","SABIO-RK:1858","KEGG_REACTION:R01759"],"synonyms":[{"name":"L-arabinose:NADP reductase activity","type":"exact"},{"name":"arabinose reductase activity","type":"broad"},{"name":"arabinose:NADP reductase activity","type":"broad"}],"termid":"GO:0032867","terms_by_termid":{"GO:0032867":null}}


id: GO:1903313
data:
  {"annotated_genes":["SJAG_04084","SJAG_04350","SJAG_01521","SJAG_01191","SJAG_00759","SJAG_00966","SJAG_01053","SJAG_02370","SJAG_00996","SJAG_04818","SJAG_03883","SJAG_16457","SJAG_03876","SJAG_04427","SJAG_05694","SJAG_02018","SJAG_02213","SJAG_04880","SJAG_04006","SJAG_03179","SJAG_04153","SJAG_01436","SJAG_02808","SJAG_02239","SJAG_03113","SJAG_00391","SJAG_01040","SJAG_04407","SJAG_05010","SJAG_02540","SJAG_03597","SJAG_00343","SJAG_04682","SJAG_01919","SJAG_01818","SJAG_04825","SJAG_02058","SJAG_02723","SJAG_04321","SJAG_02383","SJAG_05322","SJAG_00285","SJAG_01944","SJAG_01910","SJAG_03745","SJAG_00854","SJAG_02622","SJAG_04824","SJAG_01625","SJAG_00686","SJAG_02036","SJAG_03157"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061158"},{"annotations":[102181,87598,109542,105936,105985,108062],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000290"},{"annotations":[114175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061157"},{"annotations":[93313,91976,89122,100459,88292,101306,111955,114366,103509,98139,102511,111515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071042"},{"annotations":[95984,107129,85763,70298,94204,109392,111214,71458,76366,94118,70737,74092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000288"},{"annotations":[88641,99095,94574,90393,111728,86839,88039,91570,112685,88546,85853,89460,105254,87980,113242],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000289"},{"annotations":[87716],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"},{"annotations":[91688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990074"},{"annotations":[114477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"},{"annotations":[88206,74286,72914,106981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048026"},{"annotations":[102702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120272"},{"annotations":[85764,100959,97065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060213"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mRNA metabolic process.","definition_xrefs":["GOC:vw","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of RNA metabolic process","termid":"GO:0051254"},{"relation_name":"is_a","term_name":"regulation of mRNA metabolic process","termid":"GO:1903311"},{"relation_name":"positively_regulates","term_name":"mRNA metabolic process","termid":"GO:0016071"}],"gene_count":52,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00343":null,"SJAG_00391":null,"SJAG_00686":null,"SJAG_00759":null,"SJAG_00854":null,"SJAG_00966":null,"SJAG_00996":null,"SJAG_01040":null,"SJAG_01053":null,"SJAG_01191":null,"SJAG_01436":null,"SJAG_01521":null,"SJAG_01625":null,"SJAG_01818":null,"SJAG_01910":null,"SJAG_01919":null,"SJAG_01944":null,"SJAG_02018":null,"SJAG_02036":null,"SJAG_02058":null,"SJAG_02213":null,"SJAG_02239":null,"SJAG_02370":null,"SJAG_02383":null,"SJAG_02540":null,"SJAG_02622":null,"SJAG_02723":null,"SJAG_02808":null,"SJAG_03113":null,"SJAG_03157":null,"SJAG_03179":null,"SJAG_03597":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_03883":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04350":null,"SJAG_04407":null,"SJAG_04427":null,"SJAG_04682":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04825":null,"SJAG_04880":null,"SJAG_05010":null,"SJAG_05322":null,"SJAG_05694":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mRNA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of mRNA metabolic process","type":"narrow"},{"name":"activation of mRNA metabolism","type":"narrow"},{"name":"positive regulation of mRNA metabolism","type":"exact"},{"name":"up regulation of mRNA metabolic process","type":"exact"},{"name":"up regulation of mRNA metabolism","type":"exact"},{"name":"up-regulation of mRNA metabolic process","type":"exact"},{"name":"up-regulation of mRNA metabolism","type":"exact"},{"name":"upregulation of mRNA metabolic process","type":"exact"},{"name":"upregulation of mRNA metabolism","type":"exact"}],"termid":"GO:1903313","terms_by_termid":{"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0036450":null,"GO:0048026":null,"GO:0060213":null,"GO:0061157":null,"GO:0061158":null,"GO:0071042":null,"GO:0120272":null,"GO:1905746":null,"GO:1990074":null}}


id: PBO:0012604
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Triose Phosphate Isomerase","termid":"PBO:0012604"}


id: GO:0031404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chloride ion (Cl-).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"chloride ion binding","synonyms":[{"name":"Cl- ion binding","type":"exact"},{"name":"chloride binding","type":"exact"}],"termid":"GO:0031404"}


id: GO:0050574
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-(R)-hydroxypropyl-coenzyme M + NAD+ = 2-oxopropyl-coenzyme M + H+ + NADH.","definition_xrefs":["EC:1.1.1.268","RHEA:13249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-(R)-hydroxypropyl-CoM dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0852","MetaCyc:1.1.1.268-RXN","KEGG_REACTION:R05689"],"synonyms":[{"name":"2-(2-(R)-hydroxypropylthio)ethanesulfonate dehydrogenase activity","type":"related"},{"name":"2-[2-(R)-hydroxypropylthio]ethanesulfonate:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0050574"}


id: PBO:0063946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTEN induced kinase 1","termid":"PBO:0063946"}


id: PBO:0073415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 21","termid":"PBO:0073415"}


id: PBO:0059840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTFR2 pseudogene 2","termid":"PBO:0059840"}


id: PBO:0003960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMPACT domain protein, involved in translation (predicted)","termid":"PBO:0003960"}


id: PBO:0005816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Csl4 (predicted)","termid":"PBO:0005816"}


id: GO:1905193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chloroplast fission.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:26862170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of chloroplast fission","termid":"GO:1905192"},{"relation_name":"negatively_regulates","term_name":"chloroplast fission","termid":"GO:0010020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chloroplast fission","synonyms":[{"name":"down regulation of chloroplast division","type":"exact"},{"name":"down regulation of chloroplast fission","type":"exact"},{"name":"down-regulation of chloroplast division","type":"exact"},{"name":"down-regulation of chloroplast fission","type":"exact"},{"name":"downregulation of chloroplast division","type":"exact"},{"name":"downregulation of chloroplast fission","type":"exact"},{"name":"inhibition of chloroplast division","type":"narrow"},{"name":"inhibition of chloroplast fission","type":"narrow"},{"name":"negative regulation of chloroplast division","type":"exact"}],"termid":"GO:1905193"}


id: PBO:0053923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1220","termid":"PBO:0053923"}


id: GO:1903532
data:
  {"annotated_genes":["SJAG_00661"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045921"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of secretion by cell.","definition_xrefs":["GO_REF:0000058","PMID:12130530","GOC:pm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"positively_regulates","term_name":"secretion by cell","termid":"GO:0032940"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00661":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of secretion by cell","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cellular secretion","type":"narrow"},{"name":"activation of secretion by cell","type":"narrow"},{"name":"positive regulation of cellular secretion","type":"exact"},{"name":"up regulation of cellular secretion","type":"exact"},{"name":"up regulation of secretion by cell","type":"exact"},{"name":"up-regulation of cellular secretion","type":"exact"},{"name":"up-regulation of secretion by cell","type":"exact"},{"name":"upregulation of cellular secretion","type":"exact"},{"name":"upregulation of secretion by cell","type":"exact"}],"termid":"GO:1903532","terms_by_termid":{"GO:0045921":null}}


id: GO:0097132
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin D2 and cyclin-dependent kinase 6 (CDK6). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["GOC:so","PMID:15935619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin D2-CDK6 complex","termid":"GO:0097132"}


id: GO:0099140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins in the presynaptic actin cytoskeleton.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cytoskeleton organization","termid":"GO:0030036"},{"relation_name":"is_a","term_name":"presynaptic cytoskeleton organization","termid":"GO:0099187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"presynaptic actin cytoskeleton organization","termid":"GO:0099140"}


id: PBO:0057231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 410","termid":"PBO:0057231"}


id: GO:0042440
data:
  {"annotated_genes":["SJAG_03961","SJAG_02876","SJAG_01155","SJAG_01841","SJAG_01786","SJAG_04397","SJAG_01372","SJAG_04944","SJAG_03862","SJAG_00366","SJAG_05283","SJAG_04109","SJAG_03173","SJAG_00097","SJAG_02896","SJAG_01192"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105579,89239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006784"},{"annotations":[109945,91837,101236,112717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006783"},{"annotations":[102644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042167"},{"annotations":[66680,90494,113059,88898,88389,87023,92435,91838],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006782"},{"annotations":[93858,111504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019354"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pigment, any general or particular coloring matter in living organisms, e.g. melanin.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00366":null,"SJAG_01155":null,"SJAG_01192":null,"SJAG_01372":null,"SJAG_01786":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03173":null,"SJAG_03862":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04397":null,"SJAG_04944":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment metabolic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"pigment metabolism","type":"exact"}],"termid":"GO:0042440","terms_by_termid":{"GO:0006782":null,"GO:0006783":null,"GO:0006784":null,"GO:0019354":null,"GO:0042167":null}}


id: PBO:0062764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily R member 1","termid":"PBO:0062764"}


id: GO:0030405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Was not defined before being made obsolete.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete matrix metalloproteinase 19 activity (obsolete GO:0030405)","synonyms":[{"name":"MMP-19","type":"exact"},{"name":"matrix metalloproteinase 19 activity","type":"exact"}],"termid":"GO:0030405"}


id: PBO:0042234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Y like 6 (pseudogene)","termid":"PBO:0042234"}


id: PBO:0091465
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-glutamine substrate KM 800 uM, 2-oxoglutarate substrate KM 9 uM, NADH substrate KM 11 uM, pH optimum 6.4","termid":"PBO:0091465"}


id: GO:1902152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to DNA integrity checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to cell cycle checkpoint signaling","termid":"GO:1902146"},{"relation_name":"is_a","term_name":"regulation of response to DNA integrity checkpoint signaling","termid":"GO:1902151"},{"relation_name":"positively_regulates","term_name":"response to DNA integrity checkpoint signaling","termid":"GO:0072402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to DNA integrity checkpoint signaling","synonyms":[{"name":"activation of DNA integrity checkpoint effector process","type":"exact"},{"name":"activation of response to DNA integrity checkpoint signaling","type":"narrow"},{"name":"activation of response to signal involved in DNA integrity checkpoint","type":"exact"},{"name":"positive regulation of DNA integrity checkpoint effector process","type":"exact"},{"name":"positive regulation of response to signal involved in DNA integrity checkpoint","type":"exact"},{"name":"up regulation of DNA integrity checkpoint effector process","type":"exact"},{"name":"up regulation of response to DNA integrity checkpoint signaling","type":"exact"},{"name":"up regulation of response to signal involved in DNA integrity checkpoint","type":"exact"},{"name":"up-regulation of DNA integrity checkpoint effector process","type":"exact"},{"name":"up-regulation of response to DNA integrity checkpoint signaling","type":"exact"},{"name":"up-regulation of response to signal involved in DNA integrity checkpoint","type":"exact"},{"name":"upregulation of DNA integrity checkpoint effector process","type":"exact"},{"name":"upregulation of response to DNA integrity checkpoint signaling","type":"exact"},{"name":"upregulation of response to signal involved in DNA integrity checkpoint","type":"exact"}],"termid":"GO:1902152"}


id: PBO:0038508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily D member 1 pseudogene 3","termid":"PBO:0038508"}


id: PBO:0046913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity E5","termid":"PBO:0046913"}


id: PBO:0004382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L36","termid":"PBO:0004382"}


id: PBO:0089973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated Paf1 complex subunit Leo1","termid":"PBO:0089973"}


id: GO:1904076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of estrogen biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:24530842","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hormone biosynthetic process","termid":"GO:0046885"},{"relation_name":"is_a","term_name":"regulation of steroid biosynthetic process","termid":"GO:0050810"},{"relation_name":"regulates","term_name":"estrogen biosynthetic process","termid":"GO:0006703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of estrogen biosynthetic process","synonyms":[{"name":"regulation of estrogen anabolism","type":"exact"},{"name":"regulation of estrogen biosynthesis","type":"exact"},{"name":"regulation of estrogen formation","type":"exact"},{"name":"regulation of estrogen synthesis","type":"exact"},{"name":"regulation of oestrogen biosynthesis","type":"exact"},{"name":"regulation of oestrogen biosynthetic process","type":"exact"}],"termid":"GO:1904076"}


id: PBO:0076887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 38","termid":"PBO:0076887"}


id: GO:0060162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the dopamine receptor, phospholipase C activating pathway.","definition_xrefs":["GOC:tb","GOC:dph","PMID:15016423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of dopamine receptor signaling pathway","termid":"GO:0060160"},{"relation_name":"is_a","term_name":"negative regulation of phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:1900737"},{"relation_name":"negatively_regulates","term_name":"phospholipase C-activating dopamine receptor signaling pathway","termid":"GO:0060158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of phospholipase C-activating dopamine receptor signaling pathway","synonyms":[{"name":"negative regulation of dopamine receptor, phospholipase C activating pathway","type":"exact"},{"name":"negative regulation of phospholipase C-activating dopamine receptor signalling pathway","type":"exact"}],"termid":"GO:0060162"}


id: GO:2001172
data:
  {"annotated_genes":["SJAG_05006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92639],"is_not":false,"summary":null,"term":"GO:2001172"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucose catabolic process to ethanol.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glucose metabolic process","termid":"GO:0010907"},{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"regulation of glycolytic fermentation to ethanol","termid":"GO:2001154"},{"relation_name":"positively_regulates","term_name":"glycolytic fermentation to ethanol","termid":"GO:0019655"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glycolytic fermentation to ethanol","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of ethanol fermentation","type":"exact"},{"name":"positive regulation of glucose fermentation to ethanol","type":"exact"}],"termid":"GO:2001172","terms_by_termid":{"GO:2001172":null}}


id: PBO:0060954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor kappa B subunit 2","termid":"PBO:0060954"}


id: GO:0060146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The posttranscriptional gene silencing of host genes that are homologous to viral genes after viral infection.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete host gene silencing in virus induced gene silencing (obsolete GO:0060146)","termid":"GO:0060146"}


id: SO:0000048
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"To substitute a subsection of sequence for another.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000048 substitute (obsolete SO:0000048)","termid":"SO:0000048"}


id: GO:0010025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of wax, which includes C16 and C18 fatty acids.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wax metabolic process","termid":"GO:0010166"},{"relation_name":"is_a","term_name":"fatty acid derivative biosynthetic process","termid":"GO:1901570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"wax biosynthetic process","secondary_identifiers":["MetaCyc:PWY-282"],"synonyms":[{"name":"wax anabolism","type":"exact"},{"name":"wax biosynthesis","type":"exact"},{"name":"wax formation","type":"exact"},{"name":"wax synthesis","type":"exact"}],"termid":"GO:0010025"}


id: GO:0010346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to a shoot axis. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant organ formation","termid":"GO:1905393"},{"relation_name":"part_of","term_name":"shoot system morphogenesis","termid":"GO:0010016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"shoot axis formation","synonyms":[{"name":"shoot formation","type":"related"}],"termid":"GO:0010346"}


id: PBO:0083603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; overlaps 3' end of essential BET4 gene encoding the alpha subunit of Type II geranylgeranyltransferase","termid":"PBO:0083603"}


id: PBO:0084116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helicase-like protein encoded within the telomeric Y' element; induced by treatment with 8-methoxypsoralen and UVA irradiation; SWAT-GFP and mCherry fusion proteins localize to the nucleus","termid":"PBO:0084116"}


id: GO:1990874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of vascular smooth muscle cells, resulting in the expansion of a cell population. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels.","definition_xrefs":["PMID:23246467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell proliferation","termid":"GO:0048659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell proliferation","synonyms":[{"name":"VSMC proliferation","type":"exact"},{"name":"vascular smooth muscle cell proliferation","type":"exact"}],"termid":"GO:1990874"}


id: PR:Q1MTQ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell cycle control protein 50B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 89 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.11c","secondary_identifiers":["UniProtKB:Q1MTQ5"],"synonyms":[{"name":"Spom972h-TMEM30B","type":"exact"}],"termid":"PR:Q1MTQ5"}


id: PBO:0049287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 6, pseudogene","termid":"PBO:0049287"}


id: PBO:0041986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 28B","termid":"PBO:0041986"}


id: PBO:0000421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron-sulfur cluster assembly scaffold protein Isu1","termid":"PBO:0000421"}


id: PR:O14035
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29B12.14c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized permease C29B12.14c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.14c","synonyms":[{"name":"Spom972h-SPAC29B12.14c","type":"exact"}],"termid":"PR:O14035"}


id: GO:1901442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to furfural.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to furfural","termid":"GO:1901426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to furfural","termid":"GO:1901442"}


id: FYPO:0002004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain detectable microtubules of one or more types.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000054","FYPO:0005447","FYPO:0002399","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"microtubules absent from cell","synonyms":[{"name":"absent microtubules","type":"exact"},{"name":"microtubules absent from cell during mitotic cell cycle","type":"related"},{"name":"microtubules absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0002004"}


id: PBO:0081241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF8-ERVK3-1 readthrough (NMD candidate)","termid":"PBO:0081241"}


id: PBO:0004977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ type DNA helicase Tlh1","termid":"PBO:0004977"}


id: PR:O13908
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22A12.17c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C22A12.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.17c","synonyms":[{"name":"Spom972h-SPAC22A12.17c","type":"exact"}],"termid":"PR:O13908"}


id: PBO:0044721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 8 (pseudogene)","termid":"PBO:0044721"}


id: PBO:0059725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 33","termid":"PBO:0059725"}


id: PBO:0055761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA imatinib upregulated","termid":"PBO:0055761"}


id: FYPO:0003274
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing S-nitrosoglutathione (GSNO).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000003","FYPO:0000257","FYPO:0002057","FYPO:0000139","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on GSNO","synonyms":[{"name":"normal cell population growth in presence of GSNO","type":"exact"},{"name":"normal cell population growth on GSNO","type":"exact"},{"name":"normal cell population growth on S-nitrosoglutathione","type":"exact"},{"name":"normal cellular response to GSNO","type":"related"},{"name":"normal vegetative cell population growth on GSNO","type":"exact"}],"termid":"FYPO:0003274"}


id: GO:0001594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a trace amine to initiate a change in cell activity. Trace amines are biogenic amines that are synthesized from aromatic amino acids and are substrates for monoamine oxidase, and are therefore detectable only at trace levels in mammals.","definition_xrefs":["PMID:19325074","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled amine receptor activity","termid":"GO:0008227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"trace-amine receptor activity","termid":"GO:0001594"}


id: PBO:0064804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 1A pseudogene 1","termid":"PBO:0064804"}


id: PBO:0058550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6129","termid":"PBO:0058550"}


id: GO:0060974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another that contribute to the formation of the heart. The initial heart structure is made up of mesoderm-derived heart progenitor cells and neural crest-derived cells.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"},{"relation_name":"part_of","term_name":"heart formation","termid":"GO:0060914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in heart formation","termid":"GO:0060974"}


id: PBO:0068334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 41","termid":"PBO:0068334"}


id: GO:0009779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A photosynthetic phosphorylation process in which ATP synthesis is linked to the transport of electrons from water to NADP+ with the production of NADPH and dioxygen (O2). Involves photosystem I and photosystem II.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosynthetic phosphorylation","termid":"GO:0009777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"noncyclic photosynthetic phosphorylation","termid":"GO:0009779"}


id: PBO:0065957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD23 homolog A, nucleotide excision repair protein","termid":"PBO:0065957"}


id: PBO:0050869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase (NADP(+)) 1","termid":"PBO:0050869"}


id: PR:000044799
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell division control protein 42 (Schizosaccharomyces pombe) that is non-covalently bound to GTP.","definition_xrefs":["PRO:DAN","PomBase:MH","PMID:26941334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division control protein 42 (Schizosaccharomyces pombe)","termid":"PR:000044798"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cdc42/GTP+","pombase_gene_id":"SPAC110.03","synonyms":[{"name":"PomBase_original_PRO_term_name: cell division control protein 42, GTP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cdc42/GTP+","type":"exact"},{"name":"cdc42/GTP+","type":"exact"}],"termid":"PR:000044799"}


id: GO:0014016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuroblast. There are at least four stages through which the pluripotent cells of epiblast or blastula become neuroblasts.","definition_xrefs":["ISBN:0878932585","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"generation of neurons","termid":"GO:0048699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast differentiation","termid":"GO:0014016"}


id: PBO:0059534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded transcription terminator","termid":"PBO:0059534"}


id: GO:0043573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation of two or more leucoplasts by division of one leucoplast. A leucoplast is a colorless plastid involved in the synthesis of monoterpenes.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid fission","termid":"GO:0043572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leucoplast fission","termid":"GO:0043573"}


id: PBO:0061443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 2 group F member 2","termid":"PBO:0061443"}


id: PBO:0060318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myomaker, myoblast fusion factor","termid":"PBO:0060318"}


id: PBO:0042739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENPN pseudogene 2","termid":"PBO:0042739"}


id: PBO:0025437
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal metabolism disorders","termid":"PBO:0025437"}


id: GO:0070486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adhesion of one leukocyte to one or more other leukocytes via adhesion molecules.","definition_xrefs":["PMID:12972508","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte cell-cell adhesion","termid":"GO:0007159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"leukocyte aggregation","synonyms":[{"name":"immune cell aggregation","type":"exact"},{"name":"leucocyte aggregation","type":"exact"},{"name":"white blood cell aggregation","type":"exact"},{"name":"white corpuscle aggregation","type":"exact"}],"termid":"GO:0070486"}


id: FYPO:0006865
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which any mitotic DNA damage checkpoint is normal (i.e. indistinguishable from wild type) when the cell is exposed to streptonigrin. A DNA damage checkpoint normally regulates progression through the cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint","termid":"FYPO:0001705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000298","FYPO:0001312","FYPO:0000257","FYPO:0000631"],"is_obsolete":false,"name":"normal mitotic DNA damage checkpoint during cellular response to streptonigrin","synonyms":[{"name":"normal DNA damage checkpoint during cellular response to streptonigrin during mitotic cell cycle","type":"exact"},{"name":"normal mitotic DNA damage checkpoint activation during cellular response to streptonigrin","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to rufocromomycin","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to streptonigrin during vegetative growth","type":"exact"}],"termid":"FYPO:0006865"}


id: PBO:0077183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 7","termid":"PBO:0077183"}


id: GO:0043514
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is composed of an interleukin-12 alpha (p35, product of the IL12A gene) and an interleukin-12 beta subunit (p40, product of the IL12B gene) and is secreted into the extracellular space.","definition_xrefs":["PMID:12948519","PMID:1381512","GOC:add","GOC:ebc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005576"],"is_obsolete":false,"name":"interleukin-12 complex","synonyms":[{"name":"IL-12 complex","type":"exact"},{"name":"IL12A","type":"narrow"},{"name":"IL12B","type":"narrow"},{"name":"p35","type":"narrow"},{"name":"p40","type":"narrow"}],"termid":"GO:0043514"}


id: FYPO:0006555
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of two or more proteins to DNA is abnormal. The proteins may bind simultaneously or sequentially, but both or all would normally be present together on DNA at some time. One affected gene product may be encoded by the mutated gene, or all may be encoded by different genes.","definition_xrefs":["PMID:20924116","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA binding","termid":"FYPO:0000656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000653","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal multiple protein binding to DNA","synonyms":[{"name":"abnormal cooperative DNA binding","type":"related"},{"name":"abnormal protein-DNA ternary complex formation","type":"narrow"},{"name":"abnormal protein-protein interaction on DNA","type":"related"},{"name":"abnormal ternary complex formation","type":"related"},{"name":"abolished protein-DNA ternary complex formation","type":"narrow"},{"name":"abolished ternary complex formation","type":"related"}],"termid":"FYPO:0006555"}


id: GO:1904261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of basement membrane assembly involved in embryonic body morphogenesis.","definition_xrefs":["PMID:23940118","GOC:TermGenie","GO_REF:0000058","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of extracellular matrix assembly","termid":"GO:1901203"},{"relation_name":"is_a","term_name":"regulation of basement membrane assembly involved in embryonic body morphogenesis","termid":"GO:1904259"},{"relation_name":"positively_regulates","term_name":"basement membrane assembly involved in embryonic body morphogenesis","termid":"GO:2001197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of basement membrane assembly involved in embryonic body morphogenesis","synonyms":[{"name":"activation of basement membrane assembly involved in embryonic body morphogenesis","type":"narrow"},{"name":"up regulation of basement membrane assembly involved in embryonic body morphogenesis","type":"exact"},{"name":"up-regulation of basement membrane assembly involved in embryonic body morphogenesis","type":"exact"},{"name":"upregulation of basement membrane assembly involved in embryonic body morphogenesis","type":"exact"}],"termid":"GO:1904261"}


id: PBO:0034580
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_inositol_phosphate_phosphatase_activity","termid":"PBO:0034580"}


id: GO:0047481
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alanyl-poly(glycerolphosphate) + D-alanine + ATP = D-alanyl-alanyl-poly(glycerolphosphate) + phosphate + ADP.","definition_xrefs":["MetaCyc:6.3.2.16-RXN","EC:6.3.2.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"D-alanine-alanyl-poly(glycerolphosphate) ligase activity","synonyms":[{"name":"D-alanine-membrane acceptor-ligase activity","type":"related"},{"name":"D-alanine:alanyl-poly(glycerolphosphate) ligase (ADP-forming)","type":"related"},{"name":"D-alanine:membrane-acceptor ligase activity","type":"related"},{"name":"D-alanyl-alanyl-poly(glycerolphosphate) synthetase activity","type":"related"},{"name":"D-alanyl-poly(phosphoglycerol) synthetase activity","type":"related"},{"name":"D-alanylalanylpoly(phosphoglycerol) synthetase activity","type":"related"}],"termid":"GO:0047481"}


id: _global:has_start_location
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"x 'has starts location' y if and only if there exists some process z such that x 'starts with' z and z 'occurs in' y","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"has_part_that_occurs_in","termid":"_global:has_part_that_occurs_in"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_start_location","secondary_identifiers":["RO:0002231"],"termid":"_global:has_start_location"}


id: GO:0009760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The combination of atmospheric CO2 with a 3-carbon molecule phosphoenol pyruvate (PEP) in the mesophyll cells to make a 4-carbon acid which is immediately converted to malic acid. The malic acid is then passed across to the bundle sheath cells where it is broken down again to pyruvic acid and CO2. The acid is passed back to the mesophyll cells to be used again, while the CO2 is fed into the reductive pentose-phosphate cycle (Calvin cycle) and converted into sugar and starch.","definition_xrefs":["ISBN:0816017360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon fixation","termid":"GO:0015977"},{"relation_name":"is_a","term_name":"photosynthesis, dark reaction","termid":"GO:0019685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"C4 photosynthesis","secondary_identifiers":["Wikipedia:C4_carbon_fixation"],"termid":"GO:0009760"}


id: PBO:0047633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fat storage inducing transmembrane protein 2","termid":"PBO:0047633"}


id: PBO:0042330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD53 molecule","termid":"PBO:0042330"}


id: PBO:0048553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-fructose oxidoreductase domain containing 2","termid":"PBO:0048553"}


id: GO:0141160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of host phagosomes.","definition_xrefs":["PMID:30057173","PMID:21412437","PMID:15487949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cellular anatomical entity","termid":"GO:0052008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host phagosome","termid":"GO:0141160"}


id: PR:Q9UUJ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl25 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUJ5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L25, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.14c","synonyms":[{"name":"Spom972h-mrpl25","type":"exact"}],"termid":"PR:Q9UUJ5"}


id: PBO:0003587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom7 (predicted)","termid":"PBO:0003587"}


id: PBO:0027812
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short_mitotic_spindle_during_metaphase","termid":"PBO:0027812"}


id: PBO:0048450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gall bladder cancer associated suppressor of pyruvate carboxylase lncRNA","termid":"PBO:0048450"}


id: GO:0042316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any antibiotic that contains the condensed beta-lactamthiazolidine ring system. Penicillins are produced naturally during the growth of various microfungi of the genera Penicillium and Aspergillus.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"beta-lactam antibiotic metabolic process","termid":"GO:0030653"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"penicillin metabolic process","synonyms":[{"name":"penicillin metabolism","type":"exact"}],"termid":"GO:0042316"}


id: GO:0005416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: amino acid(out) + cation(out) = amino acid(in) + cation(in).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"},{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"amino acid:monoatomic cation symporter activity","synonyms":[{"name":"amino acid:cation symporter activity","type":"broad"},{"name":"cation/amino acid symporter activity","type":"exact"},{"name":"cation:amino acid symporter activity","type":"exact"}],"termid":"GO:0005416"}


id: PBO:0040925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BNC2 antisense RNA 1","termid":"PBO:0040925"}


id: PBO:0067298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 383, pseudogene","termid":"PBO:0067298"}


id: PBO:0044757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 41","termid":"PBO:0044757"}


id: GO:0097342
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex whose core components are the receptor-interacting serine/threonine-protein kinases RIPK1 and RIPK3 (also called RIP1 and RIP3). Formation of the ripoptosome can induce an extrinsic apoptotic signaling pathway or a necroptotic signaling pathway. The composition of this protein complex may depend on several factors including nature of the signal, cell type and more.","definition_xrefs":["PMID:22274400","PMID:22265414","GOC:bhm","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005829","GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ripoptosome","synonyms":[{"name":"TNFR1 complex II","type":"narrow"},{"name":"Tnfr1-CII","type":"narrow"},{"name":"necrosome","type":"related"}],"termid":"GO:0097342"}


id: CHEBI:52289
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wortmannin","termid":"CHEBI:52289"}


id: PBO:0088393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-ACP dehydratase Htd2","termid":"PBO:0088393"}


id: GO:0021860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a pyramidal neuron from its initial formation to its mature state.","definition_xrefs":["GOC:dph","GOC:jid","GO_REF:0000021","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"forebrain neuron development","termid":"GO:0021884"},{"relation_name":"part_of","term_name":"pyramidal neuron differentiation","termid":"GO:0021859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyramidal neuron development","synonyms":[{"name":"projection neuron development","type":"broad"}],"termid":"GO:0021860"}


id: PBO:0091993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane leucine transmembrane transporter Agp3","termid":"PBO:0091993"}


id: GO:0031254
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The area of a motile cell opposite to the direction of movement.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell trailing edge","synonyms":[{"name":"back of cell","type":"exact"},{"name":"trailing edge","type":"exact"}],"termid":"GO:0031254"}


id: GO:0034113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell to a cell of a different type via adhesion molecules.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"heterotypic cell-cell adhesion","termid":"GO:0034113"}


id: PBO:0029530
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_beta-glucanase","termid":"PBO:0029530"}


id: GO:0034299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a spore following the marked enlargement of part of a cell before separation by a septum. Blastospores are a type of asexual spore found in some fungi, most notably the class Glomeromycota.","definition_xrefs":["GOC:mah","PMID:30910084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conidium formation","termid":"GO:0048315"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reproductive blastospore formation","synonyms":[{"name":"blastoconidium formation","type":"exact"}],"termid":"GO:0034299"}


id: PBO:0027988
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_abnormal_septum_morphology,_enlarged_nucleus","termid":"PBO:0027988"}


id: PBO:0086619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0086619"}


id: GO:0034725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The controlled breakdown of nucleosomes on newly replicated DNA, coupled to strand elongation.","definition_xrefs":["GOC:mah","PMID:17510629"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA replication-dependent nucleosome disassembly (obsolete GO:0034725)","synonyms":[{"name":"DNA replication-dependent chromatin disassembly","type":"exact"}],"termid":"GO:0034725"}


id: PBO:0005507
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae GPI8","termid":"PBO:0005507"}


id: PBO:0040122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 9","termid":"PBO:0040122"}


id: PBO:0071131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 133","termid":"PBO:0071131"}


id: GO:0140927
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of cyclic-di-GMP from one side of a membrane to the other.","definition_xrefs":["PMID:34965418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanine nucleotide transmembrane transporter activity","termid":"GO:0001409"},{"relation_name":"is_a","term_name":"purine ribonucleotide transmembrane transporter activity","termid":"GO:0005346"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"cyclic-di-GMP transmembrane transporter activity","termid":"GO:0140927"}


id: FYPO:0001775
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the eisosome filament is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex during vegetative growth","termid":"FYPO:0000930"},{"relation_name":"is_a","term_name":"abnormal protein localization to eisosome filament","termid":"FYPO:0001774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to eisosome filament","synonyms":[{"name":"abolished protein localisation to eisosome filament","type":"exact"},{"name":"abolished protein localization to eisosome filament during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to eisosome filament during vegetative growth","type":"exact"},{"name":"abolished protein localization to linear eisosome","type":"exact"},{"name":"protein localization to eisosome filament abolished","type":"exact"}],"termid":"FYPO:0001775"}


id: GO:0015572
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of N-acetylglucosamine from one side of a membrane to the other. The D isomer of N-acetylglucosamine is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide group of a glycoprotein.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"N-acetylglucosamine transmembrane transporter activity","secondary_identifiers":["GO:0015580"],"synonyms":[{"name":"D-GlcNAc transmembrane transporter activity","type":"exact"},{"name":"N-Acetyl-D-glucosamine permease","type":"related"},{"name":"N-acetyl-D-glucosamine transmembrane transporter activity","type":"exact"},{"name":"N-acetylchitosamine transmembrane transporter activity","type":"exact"},{"name":"N-acetylglucosamine permease activity","type":"related"}],"termid":"GO:0015572"}


id: PBO:0087723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SAGA transcriptional regulatory complex; involved in proper assembly of the complex; also present as a C-terminally truncated form in the SLIK/SALSA transcriptional regulatory complex","termid":"PBO:0087723"}


id: PBO:0064424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like phospholipase domain containing 2","termid":"PBO:0064424"}


id: GO:0009631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases freezing tolerance of an organism in response to low, nonfreezing temperatures.","definition_xrefs":["GOC:syr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cold","termid":"GO:0009409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cold acclimation","termid":"GO:0009631"}


id: PBO:0113502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-phosphotransferase; catalyzes the final step in tRNA splicing, transferring the 2'-PO(4) from the splice junction to NAD(+), forming ADP-ribose 1''-2''cyclic phosphate and nicotinamide; ADP-ribosyltransferase that ADP-ribosylates 5'-phosphorylated ssDNA and ssRNAs; human and mouse orthologs complement the inviability of the yeast null mutant","termid":"PBO:0113502"}


id: PBO:0047829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXP1 divergent transcript","termid":"PBO:0047829"}


id: PBO:0046195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin A","termid":"PBO:0046195"}


id: PBO:0039039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL1 antisense RNA 1","termid":"PBO:0039039"}


id: PBO:0000440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Pmc2/Med1","termid":"PBO:0000440"}


id: PBO:0055512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2946","termid":"PBO:0055512"}


id: PR:Q9URV0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tho4 gene.","definition_xrefs":["UniProtKB:Q9URV0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C106.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.12c","synonyms":[{"name":"Spom972h-tho4","type":"exact"}],"termid":"PR:Q9URV0"}


id: PBO:0028783
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mRNA-derived_small_RNA_level","termid":"PBO:0028783"}


id: GO:2001277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-leucine biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of amino acid biosynthetic process","termid":"GO:2000283"},{"relation_name":"is_a","term_name":"regulation of L-leucine biosynthetic process","termid":"GO:2001276"},{"relation_name":"negatively_regulates","term_name":"L-leucine biosynthetic process","termid":"GO:0009098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"negative regulation of L-leucine biosynthetic process","synonyms":[{"name":"negative regulation of L-leucine anabolism","type":"exact"},{"name":"negative regulation of L-leucine biosynthesis","type":"exact"},{"name":"negative regulation of L-leucine formation","type":"exact"},{"name":"negative regulation of L-leucine synthesis","type":"exact"},{"name":"negative regulation of leucine biosynthetic process","type":"broad"}],"termid":"GO:2001277"}


id: PBO:0049452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GXYLT1 pseudogene 6","termid":"PBO:0049452"}


id: FYPO:0006621
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which deacetylation of lysine at position 4 of histone H3 is normal (i.e. indistinguishable from wild type) when the cell is returned to glucose-rich medium following glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification","termid":"FYPO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal H3-K4 deacetylation during recovery from glucose starvation","synonyms":[{"name":"normal H3-K4 deacetylation during recovery from glucose depletion","type":"exact"},{"name":"normal H3-K4 deacetylation during recovery from glucose deprivation","type":"exact"},{"name":"normal H3-K4 deacetylation during recovery from glucose limitation","type":"related"},{"name":"normal H3-K4 deacetylation following glucose starvation","type":"exact"},{"name":"normal H3K4 deacetylation during recovery from glucose starvation","type":"exact"}],"termid":"FYPO:0006621"}


id: GO:0047553
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + CoA + oxidized ferredoxin = succinyl-CoA + CO2 + reduced ferredoxin.","definition_xrefs":["EC:1.2.7.3","MetaCyc:2-OXOGLUTARATE-SYNTHASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor","termid":"GO:0016625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2-oxoglutarate synthase activity","secondary_identifiers":["RHEA:17297"],"synonyms":[{"name":"2-ketoglutarate ferredoxin oxidoreductase activity","type":"related"},{"name":"2-oxoglutarate ferredoxin oxidoreductase activity","type":"related"},{"name":"2-oxoglutarate:ferredoxin 2-oxidoreductase (CoA-succinylating)","type":"related"},{"name":"2-oxoglutarate:ferredoxin 2-oxidoreductase (decarboxylating)","type":"related"},{"name":"2-oxoglutarate:ferredoxin oxidoreductase activity","type":"related"},{"name":"KGOR activity","type":"related"},{"name":"alpha-ketoglutarate synthase activity","type":"related"},{"name":"alpha-ketoglutarate-ferredoxin oxidoreductase activity","type":"related"}],"termid":"GO:0047553"}


id: PBO:0076516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 18 pseudogene","termid":"PBO:0076516"}


id: PBO:0064990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich mitotic checkpoint control factor","termid":"PBO:0064990"}


id: MOD:01994
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to N1'-formyl-L-tryptophan.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formyl-L-tryptophan","termid":"MOD:01106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N1'-formyl-L-tryptophan","synonyms":[{"name":"N1'FoTrp","type":"exact"}],"termid":"MOD:01994"}


id: GO:0021802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The radial migration of cells from the ventricular zone that is independent of radial glial cells. Cells extend processes that terminate at the pial surface and follow the processes as they migrate.","definition_xrefs":["GOC:dph","GOC:cls","GOC:jid","PMID:12626695","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortex radially oriented cell migration","termid":"GO:0021799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somal translocation","synonyms":[{"name":"perikaryal translocation of Morest","type":"exact"}],"termid":"GO:0021802"}


id: PBO:0048714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin 5","termid":"PBO:0048714"}


id: GO:0008237
data:
  {"annotated_genes":["SJAG_03752","SJAG_01896","SJAG_04651","SJAG_00451","SJAG_02809","SJAG_04215","SJAG_04497","SJAG_00720","SJAG_00742","SJAG_03586","SJAG_03396","SJAG_04514","SJAG_02033","SJAG_01179","SJAG_00662","SJAG_00406","SJAG_01004","SJAG_03009","SJAG_00573","SJAG_00479","SJAG_02503","SJAG_03393","SJAG_00546","SJAG_00969","SJAG_04533","SJAG_04103","SJAG_03147","SJAG_02397","SJAG_03022","SJAG_00730","SJAG_03429","SJAG_01838","SJAG_02341","SJAG_00762","SJAG_01312","SJAG_03744","SJAG_01528","SJAG_01542","SJAG_04858","SJAG_00795","SJAG_04641","SJAG_01430","SJAG_01816","SJAG_01321","SJAG_00181","SJAG_03407","SJAG_06636","SJAG_02900","SJAG_01088","SJAG_01281","SJAG_03686","SJAG_02244","SJAG_02419","SJAG_03648","SJAG_00764"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85705,94081,94868,96165,103025,106760,110715,111227],"is_not":false,"summary":null,"term":"GO:0008237"},{"annotations":[87688,92463,100668,107826,111312,92607,84561,106390,101850,95929,109691,112025,110881,101685,90199,111239,91360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140492"},{"annotations":[101804,84314,99353,106095,110517,84568,89446,93905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070006"},{"annotations":[73132,90528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004181"},{"annotations":[98324,92808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070573"},{"annotations":[114803,104132,109258,85631,93406,105247,112736,97147,86309,107056,101634,94376,93397,88354,97106,98275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004222"},{"annotations":[110277,112274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008235"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activity","termid":"GO:0008233"}],"gene_count":55,"genes_by_uniquename":{"SJAG_00181":null,"SJAG_00406":null,"SJAG_00451":null,"SJAG_00479":null,"SJAG_00546":null,"SJAG_00573":null,"SJAG_00662":null,"SJAG_00720":null,"SJAG_00730":null,"SJAG_00742":null,"SJAG_00762":null,"SJAG_00764":null,"SJAG_00795":null,"SJAG_00969":null,"SJAG_01004":null,"SJAG_01088":null,"SJAG_01179":null,"SJAG_01281":null,"SJAG_01312":null,"SJAG_01321":null,"SJAG_01430":null,"SJAG_01528":null,"SJAG_01542":null,"SJAG_01816":null,"SJAG_01838":null,"SJAG_01896":null,"SJAG_02033":null,"SJAG_02244":null,"SJAG_02341":null,"SJAG_02397":null,"SJAG_02419":null,"SJAG_02503":null,"SJAG_02809":null,"SJAG_02900":null,"SJAG_03009":null,"SJAG_03022":null,"SJAG_03147":null,"SJAG_03393":null,"SJAG_03396":null,"SJAG_03407":null,"SJAG_03429":null,"SJAG_03586":null,"SJAG_03648":null,"SJAG_03686":null,"SJAG_03744":null,"SJAG_03752":null,"SJAG_04103":null,"SJAG_04215":null,"SJAG_04497":null,"SJAG_04514":null,"SJAG_04533":null,"SJAG_04641":null,"SJAG_04651":null,"SJAG_04858":null,"SJAG_06636":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0140096","GO:0003674","GO:0008233"],"is_obsolete":false,"name":"metallopeptidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5211391","Reactome:R-HSA-8986181","Reactome:R-HSA-5211405","Reactome:R-HSA-2022368","Reactome:R-HSA-9662837","Reactome:R-HSA-2220976","Reactome:R-HSA-5211387","Reactome:R-HSA-157632","Reactome:R-HSA-2666278","Reactome:R-HSA-2220944","Reactome:R-HSA-3928660","Reactome:R-HSA-2022393","Reactome:R-HSA-5211340","Reactome:R-HSA-5211356","Reactome:R-HSA-9013284","Reactome:R-HSA-157629","Reactome:R-HSA-2730752","Reactome:R-HSA-9604264","Reactome:R-HSA-193679","Reactome:R-HSA-5211400","Reactome:R-HSA-2022399","Reactome:R-HSA-9759522","Reactome:R-HSA-2022396"],"synonyms":[{"name":"metalloprotease activity","type":"narrow"},{"name":"metalloproteinase activity","type":"narrow"}],"termid":"GO:0008237","terms_by_termid":{"GO:0004181":null,"GO:0004222":null,"GO:0008235":null,"GO:0008237":null,"GO:0070006":null,"GO:0070573":null,"GO:0140492":null}}


id: PBO:0017831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZIP zinc transmembrane transporter Zrt2 (predicted)","termid":"PBO:0017831"}


id: GO:0002601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of polysaccharide antigen via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002580"},{"relation_name":"regulates","term_name":"antigen processing and presentation of polysaccharide antigen via MHC class II","termid":"GO:0002505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation of polysaccharide antigen via MHC class II","synonyms":[{"name":"regulation of polysaccharide antigen processing and presentation via MHC class II","type":"exact"}],"termid":"GO:0002601"}


id: PBO:0059856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methenyltetrahydrofolate synthetase","termid":"PBO:0059856"}


id: GO:0090201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of release of cytochrome c from mitochondria, the process in which cytochrome c is enabled to move from the mitochondrial intermembrane space into the cytosol, which is an early step in apoptosis and leads to caspase activation.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of release of cytochrome c from mitochondria","termid":"GO:0090199"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic signaling pathway","termid":"GO:2001234"},{"relation_name":"negatively_regulates","term_name":"release of cytochrome c from mitochondria","termid":"GO:0001836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007005"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0007005","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of release of cytochrome c from mitochondria","termid":"GO:0090201"}


id: PBO:0057476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 595","termid":"PBO:0057476"}


id: SO:0001996
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Region of intronic sequence within 10 bases of an exon.","definition_xrefs":["SANGER:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron_domain","termid":"SO:0001014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extended_intronic_splice_region","synonyms":[{"name":"extended intronic splice region ","type":"exact"}],"termid":"SO:0001996"}


id: GO:0046384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-deoxyribose 1-phosphate, the phosphorylated sugar 1-phospho-2-deoxyribose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribose phosphate metabolic process","termid":"GO:0019692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-deoxyribose 1-phosphate metabolic process","secondary_identifiers":["GO:0046388"],"synonyms":[{"name":"2-deoxyribose 1-phosphate metabolism","type":"exact"},{"name":"deoxyribose 1-phosphate metabolic process","type":"exact"},{"name":"deoxyribose 1-phosphate metabolism","type":"exact"}],"termid":"GO:0046384"}


id: GO:0015810
data:
  {"annotated_genes":["SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92620],"is_not":false,"summary":null,"term":"GO:0015810"}]},"cv_name":"biological_process","definition":"The process in which aspartate is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"C4-dicarboxylate transport","termid":"GO:0015740"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"aspartate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"aspartate transport","type":"broad"},{"name":"mitochondrial aspartate/glutamate transport","type":"related"}],"termid":"GO:0015810","terms_by_termid":{"GO:0015810":null}}


id: PBO:0066782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 80","termid":"PBO:0066782"}


id: GO:0036116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of long-chain fatty-acyl-CoAs, any derivative of coenzyme A in which the sulfhydryl group is in a thioester linkage with a long-chain fatty-acyl group. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty-acyl-CoA metabolic process","termid":"GO:0035336"},{"relation_name":"is_a","term_name":"fatty-acyl-CoA catabolic process","termid":"GO:0036115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0006790","GO:0008150","GO:0055086","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"long-chain fatty-acyl-CoA catabolic process","synonyms":[{"name":"long-chain fatty-acyl-CoA breakdown","type":"exact"},{"name":"long-chain fatty-acyl-CoA catabolism","type":"exact"},{"name":"long-chain fatty-acyl-CoA degradation","type":"exact"}],"termid":"GO:0036116"}


id: CHEBI:16467
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"An L-alpha-amino acid that is the L-isomer of arginine.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-arginine","termid":"CHEBI:16467"}


id: PBO:0043628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI coat complex subunit alpha","termid":"PBO:0043628"}


id: GO:2000899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a xyloglucan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan catabolic process","termid":"GO:0009251"},{"relation_name":"is_a","term_name":"xyloglucan metabolic process","termid":"GO:0010411"},{"relation_name":"is_a","term_name":"hemicellulose catabolic process","termid":"GO:2000895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"xyloglucan catabolic process","synonyms":[{"name":"xyloglucan catabolism","type":"exact"}],"termid":"GO:2000899"}


id: PBO:0091883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide-sugar 4,6-dehydratase","termid":"PBO:0091883"}


id: PBO:0000824
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ER retention signal","termid":"PBO:0000824"}


id: PBO:0081364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 200","termid":"PBO:0081364"}


id: GO:1900366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of defense response to insect.","definition_xrefs":["GOC:TermGenie","PMID:22474183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to biotic stimulus","termid":"GO:0002832"},{"relation_name":"is_a","term_name":"negative regulation of defense response","termid":"GO:0031348"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"regulation of defense response to insect","termid":"GO:2000068"},{"relation_name":"negatively_regulates","term_name":"defense response to insect","termid":"GO:0002213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of defense response to insect","synonyms":[{"name":"down regulation of defense response to insect","type":"exact"},{"name":"down regulation of physiological defense response to insect","type":"exact"},{"name":"down-regulation of defense response to insect","type":"exact"},{"name":"down-regulation of physiological defense response to insect","type":"exact"},{"name":"downregulation of defense response to insect","type":"exact"},{"name":"downregulation of physiological defense response to insect","type":"exact"},{"name":"inhibition of defense response to insect","type":"narrow"},{"name":"inhibition of physiological defense response to insect","type":"narrow"},{"name":"negative regulation of physiological defense response to insect","type":"exact"},{"name":"susceptibility to insect","type":"related"}],"termid":"GO:1900366"}


id: PBO:0028553
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_microtubule_during_mitotic_interphase,_with_protein_mislocalized_to_cytoplasmic_foci","termid":"PBO:0028553"}


id: PBO:0084121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heme-dependent repressor of hypoxic genes; mediates aerobic transcriptional repression of hypoxia induced genes such as COX5b and CYC7; repressor function regulated through decreased promoter occupancy in response to oxidative stress; contains an HMG domain that is responsible for DNA bending activity; involved in the hyperosmotic stress resistance","termid":"PBO:0084121"}


id: PBO:0053905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1195","termid":"PBO:0053905"}


id: GO:0070921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of siRNA processing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of regulatory ncRNA processing","termid":"GO:0070920"},{"relation_name":"regulates","term_name":"siRNA processing","termid":"GO:0030422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of siRNA processing","secondary_identifiers":["GO:0090065"],"synonyms":[{"name":"regulation of RNA interference, production of siRNA","type":"exact"},{"name":"regulation of chromatin silencing by small RNA, production of siRNA","type":"exact"},{"name":"regulation of production of siRNA involved in PTGS","type":"related"},{"name":"regulation of production of siRNA involved in RNA interference","type":"exact"},{"name":"regulation of production of siRNA involved in chromatin silencing by small RNA","type":"exact"},{"name":"regulation of production of siRNA involved in gene silencing by small RNA","type":"related"},{"name":"regulation of production of siRNA involved in post-transcriptional gene silencing by RNA","type":"related"},{"name":"regulation of siRNA production","type":"related"}],"termid":"GO:0070921"}


id: GO:1900509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of pentose catabolic process to ethanol.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of pentose catabolic process to ethanol (obsolete GO:1900509)","synonyms":[{"name":"regulation of pentose catabolism to ethanol","type":"exact"}],"termid":"GO:1900509"}


id: GO:0014714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, taking place in the head, whereby the developmental fate of a cell becomes restricted such that it will develop into a myoblast. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["GOC:mtg_muscle","CL:0000056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoblast fate commitment","termid":"GO:0048625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast fate commitment in head","termid":"GO:0014714"}


id: GO:0098766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. M phase during meiosis I.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete meiosis I M phase (obsolete GO:0098766)","termid":"GO:0098766"}


id: GO:1901597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbendazim stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to carbendazim","termid":"GO:1901597"}


id: PBO:0090423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Erv41","termid":"PBO:0090423"}


id: GO:1902572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of serine-type peptidase activity.","definition_xrefs":["GOC:krc","PMID:20179351","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of peptidase activity","termid":"GO:0010466"},{"relation_name":"is_a","term_name":"regulation of serine-type peptidase activity","termid":"GO:1902571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of serine-type peptidase activity","synonyms":[{"name":"down regulation of serine protease activity","type":"narrow"},{"name":"down regulation of serine-type peptidase activity","type":"exact"},{"name":"down-regulation of serine protease activity","type":"narrow"},{"name":"down-regulation of serine-type peptidase activity","type":"exact"},{"name":"downregulation of serine protease activity","type":"narrow"},{"name":"downregulation of serine-type peptidase activity","type":"exact"},{"name":"inhibition of serine protease activity","type":"narrow"},{"name":"inhibition of serine-type peptidase activity","type":"narrow"},{"name":"negative regulation of serine protease activity","type":"narrow"}],"termid":"GO:1902572"}


id: PBO:0076784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tectonin beta-propeller repeat containing 2","termid":"PBO:0076784"}


id: PBO:0084479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maturase-like coding sequence downstream of COX3/Q0275; present in some S. cerevisiae strains and other Saccharomyces species; compound ORF with homology to other group I open reading frames; in S288C is interrupted by two GC clusters, both of which ultimately result in a -1 frameshlft","termid":"PBO:0084479"}


id: GO:0106161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of small RNA loading onto RISC.","definition_xrefs":["PMID:29775584","GOC:ha"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of small RNA loading onto RISC (obsolete GO:0106161)","termid":"GO:0106161"}


id: GO:0042759
data:
  {"annotated_genes":["SJAG_04107","SJAG_04972","SJAG_03526"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93745,96799,100384],"is_not":false,"summary":null,"term":"GO:0042759"},{"annotations":[93747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900535"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a long-chain fatty acid. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["PMID:18390550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03526":null,"SJAG_04107":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"long-chain fatty acid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"long-chain fatty acid anabolism","type":"exact"},{"name":"long-chain fatty acid biosynthesis","type":"exact"},{"name":"long-chain fatty acid formation","type":"exact"},{"name":"long-chain fatty acid synthesis","type":"exact"}],"termid":"GO:0042759","terms_by_termid":{"GO:0042759":null,"GO:1900535":null}}


id: FYPO:0007977
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is abnormal during meiotic prophase I.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome pairing","termid":"FYPO:0003024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"abnormal homologous chromosome pairing during meiosis I prophase","termid":"FYPO:0007977"}


id: PBO:0014274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6,7-dimethyl-8-ribityllumazine synthase","termid":"PBO:0014274"}


id: GO:0055052
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex for the transport of metabolites into the cell, consisting of 5 subunits: two ATP-binding subunits, two membrane spanning subunits, and one substrate-binding subunit. In organisms with two membranes, the substrate-binding protein moves freely in the periplasmic space and joins the other subunits only when bound with substrate. In organisms with only one membrane the substrate-binding protein is tethered to the cytoplasmic membrane and associated with the other subunits. Transport of the substrate across the membrane is driven by the hydrolysis of ATP.","definition_xrefs":["GOC:mlg","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-binding cassette (ABC) transporter complex","termid":"GO:0043190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing","termid":"GO:0055052"}


id: GO:0010412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving mannan, a group of polysaccharides containing a backbone composed of a polymer of D-mannose units.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide metabolic process","termid":"GO:0010383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0005975"],"is_obsolete":false,"name":"mannan metabolic process","synonyms":[{"name":"mannan metabolism","type":"exact"}],"termid":"GO:0010412"}


id: GO:0007449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the proximal/distal axis of the imaginal disc. Imaginal disks are masses of hypodermic cells, carried by the larvae of some insects after leaving the egg, from which masses the wings and legs of the adult are subsequently formed.","definition_xrefs":["GOC:jid","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc pattern formation","termid":"GO:0007447"},{"relation_name":"is_a","term_name":"proximal/distal pattern formation","termid":"GO:0009954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal/distal pattern formation, imaginal disc","termid":"GO:0007449"}


id: PBO:0085881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; interacts with both the Reg1p/Glc7p phosphatase and the Snf1p kinase; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0085881"}


id: FYPO:0004175
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the observed mating efficiency, as determined by counting zygotes, asci, and sometimes spores, is lower than normal in cells of the h- mating type.","definition_xrefs":["PMID:8668157","PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mating efficiency","termid":"FYPO:0000708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased mating efficiency in h- cells","synonyms":[{"name":"reduced mating efficiency in h- cells","type":"exact"}],"termid":"FYPO:0004175"}


id: PBO:0069576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 849, pseudogene","termid":"PBO:0069576"}


id: PBO:0084128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hexokinase expressed during growth with low glucose levels; induced on non-fermentable carbon sources; required for transcriptional induction of the early meiotic-specific transcription factor IME1; required for sporulation; expression regulated by glucose-repression transcription factors Mig1/2p; protein abundance increases in response to DNA replication stress; EMI2 has a paralog, GLK1, that arose from the whole genome duplication","termid":"PBO:0084128"}


id: PR:Q9URW7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps17 gene.","definition_xrefs":["UniProtKB:Q9URW7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPJ696.01c","synonyms":[{"name":"Spom972h-vps17","type":"exact"}],"termid":"PR:Q9URW7"}


id: PBO:0081751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF680 pseudogene 1","termid":"PBO:0081751"}


id: GO:0046448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tropane alkaloids, compounds containing the 8-methyl-8-azabicyclo(3.2.1)octane ring system.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid metabolic process","termid":"GO:0009820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tropane alkaloid metabolic process","synonyms":[{"name":"tropane alkaloid metabolism","type":"exact"}],"termid":"GO:0046448"}


id: PBO:0083483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene TKL2","termid":"PBO:0083483"}


id: PBO:0056182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAFG antisense RNA 1","termid":"PBO:0056182"}


id: PBO:0049745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit mu","termid":"PBO:0049745"}


id: PBO:0047881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, BrdU type, common, fra(5)(q15)","termid":"PBO:0047881"}


id: GO:0015168
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of glycerol from one side of a membrane to the other. Glycerol is 1,2,3-propanetriol, a sweet, hygroscopic, viscous liquid, widely distributed in nature as a constituent of many lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"polyol transmembrane transporter activity","termid":"GO:0015166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"glycerol transmembrane transporter activity","termid":"GO:0015168"}


id: GO:0030139
data:
  {"annotated_genes":["SJAG_03504","SJAG_00800","SJAG_03146","SJAG_01167","SJAG_00104","SJAG_02805","SJAG_02833","SJAG_00677","SJAG_01189"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89876,103607,106745,106846,111534],"is_not":false,"summary":null,"term":"GO:0030139"},{"annotations":[92328,107712,104384,107653],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"}]},"cv_name":"cellular_component","definition":"A membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance. Endocytic vesicles fuse with early endosomes to deliver the cargo for further sorting.","definition_xrefs":["GOC:go_curators","PMID:19696797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00677":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01189":null,"SJAG_02805":null,"SJAG_02833":null,"SJAG_03146":null,"SJAG_03504":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"endocytic vesicle","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao1362520468"],"synonyms":[{"name":"endocytotic transport vesicle","type":"exact"},{"name":"endocytotic vesicle","type":"exact"}],"termid":"GO:0030139","terms_by_termid":{"GO:0030122":null,"GO:0030139":null}}


id: PBO:0083655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endonuclease I-SceII; encoded by a mobile group I intron within the mitochondrial COX1 gene; intron is normally spliced by the BI4p maturase but AI4p can mutate to acquire the same maturase activity","termid":"PBO:0083655"}


id: PBO:0067272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 350, pseudogene","termid":"PBO:0067272"}


id: PBO:0056475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated tyrosine carboxypeptidase 1","termid":"PBO:0056475"}


id: PBO:0075441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted protein acidic and cysteine rich","termid":"PBO:0075441"}


id: PBO:0065996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS like proto-oncogene A","termid":"PBO:0065996"}


id: GO:0004332
data:
  {"annotated_genes":["SJAG_03373","SJAG_01310"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101871,101872],"is_not":false,"summary":null,"term":"GO:0004332"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-fructose 1,6-bisphosphate = D-glyceraldehyde 3-phosphate + dihydroxyacetone phosphate.","definition_xrefs":["EC:4.1.2.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01310":null,"SJAG_03373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"fructose-bisphosphate aldolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-71495","MetaCyc:F16ALDOLASE-RXN","RHEA:14729","Reactome:R-HSA-71496"],"synonyms":[{"name":"1,6-diphosphofructose aldolase activity","type":"related"},{"name":"D-fructose-1,6-bisphosphate D-glyceraldehyde-3-phosphate-lyase (glycerone-phosphate-forming)","type":"related"},{"name":"D-fructose-1,6-bisphosphate D-glyceraldehyde-3-phosphate-lyase activity","type":"related"},{"name":"SMALDO","type":"related"},{"name":"aldolase activity","type":"broad"},{"name":"diphosphofructose aldolase activity","type":"related"},{"name":"fructoaldolase activity","type":"related"},{"name":"fructose 1,6-diphosphate aldolase activity","type":"related"},{"name":"fructose 1-monophosphate aldolase activity","type":"related"},{"name":"fructose 1-phosphate aldolase activity","type":"related"},{"name":"fructose diphosphate aldolase activity","type":"related"},{"name":"fructose-1,6-bisphosphate triosephosphate-lyase activity","type":"related"},{"name":"ketose 1-phosphate aldolase activity","type":"related"},{"name":"phosphofructoaldolase activity","type":"related"},{"name":"zymohexase activity","type":"related"}],"termid":"GO:0004332","terms_by_termid":{"GO:0004332":null}}


id: PBO:0056839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MGAT4 family member D","termid":"PBO:0056839"}


id: FYPO:0007943
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of chromatin organization is abnormal during the meiotic cell cycle. Chromatin organization results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"},{"relation_name":"is_a","term_name":"abnormal meiotic chromosome organization","termid":"FYPO:0006759"},{"relation_name":"is_a","term_name":"abnormal cellular process during meiotic cell cycle","termid":"FYPO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal chromatin organization during meiotic cell cycle","termid":"FYPO:0007943"}


id: GO:0010943
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H2O = NMNH + ADP.","definition_xrefs":["GOC:tb","PMID:12790796","RHEA:60820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinucleotide phosphatase activity","termid":"GO:0004551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"NADPH pyrophosphatase activity","termid":"GO:0010943"}


id: GO:0036171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a group of unicellular organisms grow in a threadlike, filamentous shape in response to a chemical stimulus.","definition_xrefs":["PMID:17554048","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filamentous growth of a population of unicellular organisms","termid":"GO:0044182"},{"relation_name":"part_of","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"filamentous growth of a population of unicellular organisms in response to chemical stimulus","termid":"GO:0036171"}


id: PBO:0030695
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutathione-disulfide_reductase_activity","termid":"PBO:0030695"}


id: PBO:0073966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 15","termid":"PBO:0073966"}


id: PBO:0079662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 10","termid":"PBO:0079662"}


id: GO:0097082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a vascular smooth muscle cell in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell fate specification","termid":"GO:0042694"},{"relation_name":"part_of","term_name":"vascular associated smooth muscle cell fate commitment","termid":"GO:0097081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell fate specification","synonyms":[{"name":"vascular smooth muscle cell fate specification","type":"exact"}],"termid":"GO:0097082"}


id: PBO:0015713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc48p-Npl4p-Vms1p AAA ATPase complex subunit involved in ER associated ubiquitin-dependent protein catabolic process Vms1 (predicted)","termid":"PBO:0015713"}


id: PBO:0062452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 122 pseudogene","termid":"PBO:0062452"}


id: GO:0052414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving glucans within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont glucan (obsolete GO:0052414)","termid":"GO:0052414"}


id: PBO:0085310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidate cytidylyltransferase (CDP-diglyceride synthetase); an enzyme that catalyzes that conversion of CTP + phosphate into diphosphate + CDP-diaclglyerol, a critical step in the synthesis of all major yeast phospholipids; human homolog CDS1 can complement yeast cds1 null mutant","termid":"PBO:0085310"}


id: GO:0071326
data:
  {"annotated_genes":["SJAG_00574","SJAG_01754","SJAG_01254","SJAG_04026","SJAG_03081","SJAG_00472","SJAG_04312","SJAG_01699","SJAG_02444"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105569,102539,90287,97906,101948,111601,112641,102893,105066],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a monosaccharide stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to monosaccharide","termid":"GO:0034284"},{"relation_name":"is_a","term_name":"cellular response to carbohydrate stimulus","termid":"GO:0071322"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00574":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to monosaccharide stimulus","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071326","terms_by_termid":{"GO:0010619":null}}


id: GO:0019824
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A subform of peroxisome that corresponds to an intermediate in a peroxisome assembly pathway, which operates by conversion of peroxisomal subforms in the direction P1, P2 -> P3 -> P4 -> P5 -> P6. P6 peroxisomes are distinguished from the other subforms on the bases of buoyant density and protein content, and are equivalent to mature peroxisomes.","definition_xrefs":["PMID:10629216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005777"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005777","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"P6 peroxisome","synonyms":[{"name":"peroxisome vesicle","type":"broad"}],"termid":"GO:0019824"}


id: GO:0006181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dGMP, deoxyguanosine monophosphate (2'-deoxyguanosine 5'-phosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide biosynthetic process","termid":"GO:0009153"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009171"},{"relation_name":"is_a","term_name":"dGMP metabolic process","termid":"GO:0046054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"dGMP biosynthetic process","synonyms":[{"name":"dGMP anabolism","type":"exact"},{"name":"dGMP biosynthesis","type":"exact"},{"name":"dGMP formation","type":"exact"},{"name":"dGMP synthesis","type":"exact"}],"termid":"GO:0006181"}


id: GO:0003297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the aorta inserts between the atrioventricular valves, contributing to the shaping of the heart.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart wedging","termid":"GO:0003297"}


id: MOD:00305
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts six L-cysteine residues, an L-serine residue and a eight-iron seven-sulfur cluster to hexakis-L-cysteinyl L-serinyl octairon heptasulfide.","definition_xrefs":["PubMed:12215645","PubMed:10525412","PubMed:9063865","RESID:AA0300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-serine residue","termid":"MOD:02072"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexakis-L-cysteinyl L-serinyl octairon heptasulfide","synonyms":[{"name":"Cys6Ser-[8Fe7S]","type":"exact"},{"name":"METAL Iron-sulfur (8Fe-7S)","type":"exact"},{"name":"hexakis-L-cysteinyl L-serinyl octairon heptasulfide","type":"exact"},{"name":"nitrogenase P-cluster","type":"exact"}],"termid":"MOD:00305"}


id: PBO:0083051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Diacylglycerol acyltransferase; catalyzes the terminal step of triacylglycerol (TAG) formation, acylates diacylglycerol using acyl-CoA as an acyl donor; Lro1p and Dga1p can O-acylate ceramides; localized to lipid particles","termid":"PBO:0083051"}


id: PR:O42926
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps1302 gene.","definition_xrefs":["UniProtKB:O42926","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 13b (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.02c","synonyms":[{"name":"Spom972h-vps1302","type":"exact"}],"termid":"PR:O42926"}


id: PR:O94699
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC83.16c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane protein C83.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.16c","synonyms":[{"name":"Spom972h-SPBC83.16c","type":"exact"}],"termid":"PR:O94699"}


id: PBO:0072866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAS-6 centriolar assembly protein","termid":"PBO:0072866"}


id: GO:0102973
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7 malonyl-CoA + 5 H+ + a hexanoyl-[acyl-carrier-protein] = norsolorinate anthrone + 7 coenzyme A + 7 carbon dioxide + 2 H2O + a holo-[acyl-carrier protein].","definition_xrefs":["EC:2.3.1.221","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"norsolorinate anthrone synthase activity","secondary_identifiers":["RHEA:35179","MetaCyc:RXN-9479"],"synonyms":[{"name":"norsolorinic acid synthase","type":"exact"}],"termid":"GO:0102973"}


id: GO:0046850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of bone remodeling, the processes of bone formation and resorption that combine to maintain skeletal integrity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tissue remodeling","termid":"GO:0034103"},{"relation_name":"regulates","term_name":"bone remodeling","termid":"GO:0046849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of bone remodeling","synonyms":[{"name":"regulation of bone remodelling","type":"exact"}],"termid":"GO:0046850"}


id: PBO:0062661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily D member 2 pseudogene","termid":"PBO:0062661"}


id: PBO:0088403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp16","termid":"PBO:0088403"}


id: PR:O14330
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16E9.15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16E9.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.15","synonyms":[{"name":"Spom972h-SPBC16E9.15","type":"exact"}],"termid":"PR:O14330"}


id: PBO:0044553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death associated protein like 1","termid":"PBO:0044553"}


id: GO:0071176
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch2 (ICN2), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-2 (MAML2); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"MAML2-RBP-Jkappa-ICN2 complex","synonyms":[{"name":"MAML2-RBP-Jkappa-Notch2 complex","type":"exact"}],"termid":"GO:0071176"}


id: PBO:0110239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rixosome complex midasin subunit Mdn1","termid":"PBO:0110239"}


id: PBO:0066042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP1A, member of RAS oncogene family pseudogene","termid":"PBO:0066042"}


id: PBO:0063251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha subfamily C, 2","termid":"PBO:0063251"}


id: PATO:0005019
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the tongue.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curved lingually","termid":"PATO:0005019"}


id: SO:0000626
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Regions of the chromosome that are important for regulating binding of chromosomes to the nuclear matrix.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomal_regulatory_element","synonyms":[{"name":"chromosomal regulatory element","type":"exact"}],"termid":"SO:0000626"}


id: FYPO:0000013
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which cell length is normal, and a new growth zone forms along the lateral portion of the cell (often in the middle) before septation, such that a single cell grows in the form of the letter T.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-shaped vegetative cell","termid":"FYPO:0007379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0001320","FYPO:0001985","FYPO:0005568","FYPO:0005447","FYPO:0000005"],"is_obsolete":false,"name":"T-shaped vegetative cell with normal cell length","synonyms":[{"name":"T-shaped cell with normal cell length during vegetative growth","type":"exact"},{"name":"T-shaped vegetative cell with normal cell length during mitotic cell cycle","type":"related"},{"name":"cell morphology, T shaped with normal cell length during vegetative growth","type":"exact"}],"termid":"FYPO:0000013"}


id: GO:0032786
data:
  {"annotated_genes":["SJAG_01213","SJAG_02551","SJAG_02057","SJAG_00150","SJAG_03967","SJAG_01149","SJAG_01151","SJAG_03061","SJAG_03118"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104926,106971],"is_not":false,"summary":null,"term":"GO:0032786"},{"annotations":[102087,113074,111366,101414,91868,105088,99122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032968"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides catalyzed by a DNA-dependent RNA polymerase.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription elongation","termid":"GO:0032784"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"positively_regulates","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_01149":null,"SJAG_01151":null,"SJAG_01213":null,"SJAG_02057":null,"SJAG_02551":null,"SJAG_03061":null,"SJAG_03118":null,"SJAG_03967":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0006355","GO:0010467"],"is_obsolete":false,"name":"positive regulation of DNA-templated transcription, elongation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of RNA elongation","type":"broad"},{"name":"positive regulation of DNA-dependent transcription, elongation","type":"exact"},{"name":"positive regulation of transcription elongation","type":"broad"},{"name":"positive regulation of transcription elongation, DNA-dependent","type":"exact"},{"name":"positive regulation of transcriptional elongation","type":"broad"},{"name":"positive transcription elongation regulator activity","type":"related"},{"name":"stimulation of RNA elongation","type":"broad"},{"name":"up regulation of RNA elongation","type":"broad"},{"name":"up-regulation of RNA elongation","type":"broad"},{"name":"upregulation of RNA elongation","type":"broad"}],"termid":"GO:0032786","terms_by_termid":{"GO:0032786":null,"GO:0032968":null}}


id: PR:O42962
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cog5 gene.","definition_xrefs":["UniProtKB:O42962","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved oligomeric Golgi complex subunit 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.14c","synonyms":[{"name":"COG complex subunit 5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cog5","type":"exact"}],"termid":"PR:O42962"}


id: GO:0018796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4,5-dihydroxyphthalate = 3,4-dihydroxybenzoate + CO2.","definition_xrefs":["EC:4.1.1.55"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4,5-dihydroxyphthalate decarboxylase activity","secondary_identifiers":["MetaCyc:45-DIHYDROXYPHTHALATE-DECARBOXYLASE-RXN","RHEA:24184","UM-BBD_enzymeID:r0149"],"synonyms":[{"name":"4,5-dihydroxyphthalate carboxy-lyase (3,4-dihydroxybenzoate-forming)","type":"related"},{"name":"4,5-dihydroxyphthalate carboxy-lyase activity","type":"related"}],"termid":"GO:0018796"}


id: PBO:0062365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily Y member 1","termid":"PBO:0062365"}


id: GO:0009959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orientation of plant parts away from gravity.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gravitropism","termid":"GO:0009630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative gravitropism","synonyms":[{"name":"shoot gravitropism","type":"narrow"}],"termid":"GO:0009959"}


id: PBO:0029072
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus,_with_protein_mislocalized_to_cytoplasm","termid":"PBO:0029072"}


id: PBO:0047597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FHAD1 antisense RNA 1","termid":"PBO:0047597"}


id: GO:1901901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any regulation of protein localization to cell division site that is involved in cytokinesis.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:22573892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell division site","termid":"GO:1901900"},{"relation_name":"part_of","term_name":"cytokinesis","termid":"GO:0000910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to cell division site involved in cytokinesis","synonyms":[{"name":"regulation of protein localisation to cell division site involved in cytokinesis","type":"exact"}],"termid":"GO:1901901"}


id: PBO:0069766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1049, pseudogene","termid":"PBO:0069766"}


id: GO:0033099
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded extension of the cell, originally characterized in Mycoplasma species, that contains an electron-dense core that is part of the cytoskeleton and is oriented lengthwise and ends distally in a bulbous knob (terminal button). Required for adherence to host cells and involved in gliding motility and cell division.","definition_xrefs":["PMID:11325545","PMID:12003948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"attachment organelle","termid":"GO:0033099"}


id: GO:0009582
data:
  {"annotated_genes":["SJAG_02258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050982"}]},"cv_name":"biological_process","definition":"The series of events in which an (non-living) abiotic stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"},{"relation_name":"is_a","term_name":"detection of stimulus","termid":"GO:0051606"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of abiotic stimulus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"perception of abiotic stimulus","type":"related"}],"termid":"GO:0009582","terms_by_termid":{"GO:0050982":null}}


id: PBO:0030137
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_GTPase_activity","termid":"PBO:0030137"}


id: PBO:0085533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S30, no bacterial homolog; RPS30B has a paralog, RPS30A, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0085533"}


id: PBO:0029601
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transporter_activity","termid":"PBO:0029601"}


id: GO:0140247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein at a presynapse.","definition_xrefs":["PMID:27764673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein catabolic process at synapse","termid":"GO:0140246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"protein catabolic process at presynapse","termid":"GO:0140247"}


id: GO:0048593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the eye are generated and organized. The camera-type eye is an organ of sight that receives light through an aperture and focuses it through a lens, projecting it on a photoreceptor field.","definition_xrefs":["GOC:mtg_sensu","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye morphogenesis","termid":"GO:0048592"},{"relation_name":"part_of","term_name":"camera-type eye development","termid":"GO:0043010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"camera-type eye morphogenesis","secondary_identifiers":["GO:0048594","GO:0048595"],"synonyms":[{"name":"camera-style eye morphogenesis","type":"exact"}],"termid":"GO:0048593"}


id: GO:0060109
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The fluid-filled cuticle layer that lies between the cortical and basal layers and is characterized by the presence of regularly spaced columnar struts that lie on either side of the annular furrows and link the two surrounding layers. In C. elegans, a defined medial layer is found only in adult animals.","definition_xrefs":["GOC:kmv","ISSN:15518507","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"collagen and cuticulin-based cuticle extracellular matrix","termid":"GO:0060102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"medial layer of collagen and cuticulin-based cuticle extracellular matrix","synonyms":[{"name":"medial layer struts","type":"related"}],"termid":"GO:0060109"}


id: PBO:0012607
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae ADR1","termid":"PBO:0012607"}


id: PBO:0002474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Sap155","termid":"PBO:0002474"}


id: PBO:0002617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex subunit Iec1","termid":"PBO:0002617"}


id: PBO:0065680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-tRNA hydrolase 2","termid":"PBO:0065680"}


id: PBO:0063164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAX8 antisense RNA 1","termid":"PBO:0063164"}


id: PBO:0002621
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.1.17","termid":"PBO:0002621"}


id: GO:0009192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a deoxyribonucleoside diphosphate, a compound consisting of a nucleobase linked to a deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate catabolic process","termid":"GO:0009134"},{"relation_name":"is_a","term_name":"deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"deoxyribonucleoside diphosphate catabolic process","synonyms":[{"name":"deoxyribonucleoside diphosphate breakdown","type":"exact"},{"name":"deoxyribonucleoside diphosphate catabolism","type":"exact"},{"name":"deoxyribonucleoside diphosphate degradation","type":"exact"}],"termid":"GO:0009192"}


id: FYPO:0000904
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule polymerization or depolymerization, by the addition or removal of tubulin dimers respectively, occurs to a lesser extent than normal. Microtubules are thus less dynamic than normal.","definition_xrefs":["GO:0031109","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased microtubule polymerization or depolymerization","synonyms":[{"name":"decreased microtubule dynamicity","type":"related"},{"name":"decreased microtubule growth or shrinkage","type":"related"},{"name":"decreased microtubule polymerisation or depolymerisation","type":"exact"},{"name":"decreased microtubule polymerization or depolymerization during mitotic cell cycle","type":"related"},{"name":"decreased microtubule polymerization or depolymerization during vegetative growth","type":"exact"},{"name":"reduced microtubule polymerization or depolymerization","type":"exact"}],"termid":"FYPO:0000904"}


id: PBO:0082264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aminopeptidase yscII; may have a role in obtaining leucine from dipeptide substrates; APE2 has a paralog, AAP1, that arose from the whole genome duplication","termid":"PBO:0082264"}


id: PBO:0067649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 824, pseudogene","termid":"PBO:0067649"}


id: FYPO:0002079
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing calcium ions during a cellular hypotonic response.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal growth on calcium","termid":"FYPO:0001020"},{"relation_name":"is_a","term_name":"normal growth during cellular response to osmotic stress","termid":"FYPO:0001021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000003","FYPO:0002057","FYPO:0002058","FYPO:0000257","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on calcium during cellular hypotonic response","synonyms":[{"name":"normal cell population growth in presence of calcium ions during cellular hypotonic response","type":"exact"},{"name":"normal cell population growth on calcium during cellular hypotonic response","type":"exact"},{"name":"normal cell population growth on calcium ion during cellular hypoosmotic response","type":"exact"},{"name":"normal cell population growth on calcium ion during cellular hypotonic response","type":"exact"},{"name":"normal cell population growth on excess calcium during cellular hypotonic response","type":"exact"},{"name":"normal cellular response to calcium ion during cellular hypotonic response","type":"related"},{"name":"normal growth on calcium ion during cellular hypotonic response","type":"exact"},{"name":"normal vegetative cell population growth on calcium ion during cellular hypotonic response","type":"exact"}],"termid":"FYPO:0002079"}


id: PBO:0034785
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear PassenGer","termid":"PBO:0034785"}


id: PBO:0044120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 6","termid":"PBO:0044120"}


id: FYPO:0003395
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mitochondrial electron transport from succinate to ubiquinone, mediated by complex II, does not occur.","definition_xrefs":["GO:0006121","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular respiration","termid":"FYPO:0000562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished mitochondrial electron transport, succinate to ubiquinone","synonyms":[{"name":"abolished mitochondrial electron transport, succinate to ubiquinone, during mitotic cell cycle","type":"related"},{"name":"abolished mitochondrial electron transport, succinate to ubiquinone, during vegetative growth","type":"exact"},{"name":"abolished succinate cytochrome c oxidoreductase","type":"related"},{"name":"abolished succinate dehydrogenase (ubiquinone) activity and ubiquinol-cytochrome-c reductase activity","type":"related"},{"name":"mitochondrial electron transport, succinate to ubiquinone, abolished","type":"exact"}],"termid":"FYPO:0003395"}


id: GO:1900782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving fumiquinazoline F.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete fumiquinazoline F metabolic process (obsolete GO:1900782)","synonyms":[{"name":"fumiquinazoline F metabolism","type":"exact"}],"termid":"GO:1900782"}


id: GO:0008764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glutamate + ATP + UDP-N-acetylmuramoyl-L-alanine = ADP + 2 H+ + phosphate + UDP-N-acetylmuramoyl-L-alanyl-D-glutamate.","definition_xrefs":["EC:6.3.2.9","RHEA:16429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"UDP-N-acetylmuramoylalanine-D-glutamate ligase activity","secondary_identifiers":["MetaCyc:UDP-NACMURALA-GLU-LIG-RXN","KEGG_REACTION:R02783"],"synonyms":[{"name":"D-glutamate ligase activity","type":"related"},{"name":"D-glutamate-adding enzyme activity","type":"related"},{"name":"MurD synthetase activity","type":"related"},{"name":"UDP-Mur-NAC-L-Ala:D-Glu ligase activity","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanine:glutamate ligase (ADP-forming)","type":"related"},{"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase activity","type":"related"},{"name":"uridine diphospho-N-acetylmuramoylalanyl-D-glutamate synthetase activity","type":"related"}],"termid":"GO:0008764"}


id: PBO:0055595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3031","termid":"PBO:0055595"}


id: FYPO:0003862
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of oxidation of one or more specific proteins, or of specific protein sites, is increased, resulting in the accumulation of proteins with oxidative modifications including carbonylated proteins, in cells in a population in stationary phase.","definition_xrefs":["PMID:17986764","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein oxidation","termid":"FYPO:0003863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"increased protein oxidation in stationary phase","synonyms":[{"name":"accumulation of carbonylated proteins in stationary phase","type":"related"},{"name":"increased level of disulfides in stationary phase","type":"related"},{"name":"increased level of oxidised thiols in proteins in stationary phase","type":"related"},{"name":"increased level of oxidized protein thiols in stationary phase","type":"related"}],"termid":"FYPO:0003862"}


id: PBO:0002270
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKA","termid":"PBO:0002270"}


id: GO:0001841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a tube from the flat layer of ectodermal cells known as the neural plate. This will give rise to the central nervous system.","definition_xrefs":["ISBN:0878932437","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic epithelial tube formation","termid":"GO:0001838"},{"relation_name":"part_of","term_name":"neural tube development","termid":"GO:0021915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural tube formation","secondary_identifiers":["Wikipedia:Neurulation","GO:0001679"],"synonyms":[{"name":"neural tube morphogenesis","type":"exact"},{"name":"neurulation","type":"exact"}],"termid":"GO:0001841"}


id: PBO:0049717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 3","termid":"PBO:0049717"}


id: PBO:0076832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase RNA component","termid":"PBO:0076832"}


id: PBO:0049723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 6 pseudogene 1","termid":"PBO:0049723"}


id: PBO:0051525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor like 1","termid":"PBO:0051525"}


id: PBO:0031766
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_antimycin_A","termid":"PBO:0031766"}


id: PBO:0057350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 544b","termid":"PBO:0057350"}


id: PBO:0046359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosulfine alpha pseudogene 1","termid":"PBO:0046359"}


id: PR:O59681
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC18E5.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18E5.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.01","synonyms":[{"name":"Spom972h-SPBC18E5.01","type":"exact"}],"termid":"PR:O59681"}


id: GO:0102836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:1-2-16:1-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:2-2-16:1-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz","PMID:7948918"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:1-2-16:1-monogalactosyldiacylglyceroldesaturase activity (obsolete GO:0102836)","termid":"GO:0102836"}


id: PBO:0004118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1 alpha related protein (predicted)","termid":"PBO:0004118"}


id: PBO:0039711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein A2","termid":"PBO:0039711"}


id: GO:2000626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of miRNA catabolic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA catabolic process","termid":"GO:1902369"},{"relation_name":"is_a","term_name":"regulation of miRNA catabolic process","termid":"GO:2000625"},{"relation_name":"is_a","term_name":"negative regulation of miRNA metabolic process","termid":"GO:2000629"},{"relation_name":"negatively_regulates","term_name":"miRNA catabolic process","termid":"GO:0010587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of miRNA catabolic process","synonyms":[{"name":"negative regulation of microRNA catabolic process","type":"exact"}],"termid":"GO:2000626"}


id: PBO:0066240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 47","termid":"PBO:0066240"}


id: GO:0051158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-arabitol, the pentitol derived from arabinose or lyxose by reduction of the aldehyde group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabitol catabolic process","termid":"GO:0051157"},{"relation_name":"is_a","term_name":"L-arabitol metabolic process","termid":"GO:0051162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"L-arabitol catabolic process","synonyms":[{"name":"L-arabitol breakdown","type":"exact"},{"name":"L-arabitol catabolism","type":"exact"},{"name":"L-arabitol degradation","type":"exact"}],"termid":"GO:0051158"}


id: GO:0035236
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the neuropeptide proctolin, to initiate a change in cell activity.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"proctolin receptor activity","termid":"GO:0035236"}


id: GO:0019298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of coenzyme B (7-mercaptoheptanoylthreonine phosphate), a coenzyme involved in the utilization of methane by methanogenic prokaryotes.","definition_xrefs":["PMID:10940051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme B metabolic process","termid":"GO:0019297"},{"relation_name":"is_a","term_name":"cellular modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"coenzyme B biosynthetic process","secondary_identifiers":["MetaCyc:P241-PWY"],"synonyms":[{"name":"coenzyme B anabolism","type":"exact"},{"name":"coenzyme B biosynthesis","type":"exact"},{"name":"coenzyme B formation","type":"exact"},{"name":"coenzyme B synthesis","type":"exact"}],"termid":"GO:0019298"}


id: PR:O14341
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC2F12.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L35, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.10","synonyms":[{"name":"Spom972h-SPBC2F12.10","type":"exact"}],"termid":"PR:O14341"}


id: POMBASE_GENE_EX_REL:not_happens_during
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not_happens_during","termid":"POMBASE_GENE_EX_REL:not_happens_during"}


id: GO:1990559
data:
  {"annotated_genes":["SJAG_03452"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86886],"is_not":false,"summary":null,"term":"GO:1990559"}]},"cv_name":"biological_process","definition":"The process in which coenzyme A is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:11158296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme A transmembrane transport","termid":"GO:0035349"},{"relation_name":"is_a","term_name":"mitochondrial transmembrane transport","termid":"GO:1990542"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03452":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mitochondrial coenzyme A transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990559","terms_by_termid":{"GO:1990559":null}}


id: PR:O14092
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 5-aminolevulinate synthase, erythroid-specific, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01637","PRO:DNx","PANTHER:PTHR13693:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-aminolevulinate synthase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.09","secondary_identifiers":["UniProtKB:O14092"],"synonyms":[{"name":"5-aminolevulinic acid synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ALAS2","type":"exact"},{"name":"delta-ALA synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"delta-aminolevulinate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14092"}


id: PBO:0068424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein with serine rich domain 1","termid":"PBO:0068424"}


id: PBO:0029147
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_methylenetetrahydrofolate_reductase_(NADPH)_activity","termid":"PBO:0029147"}


id: PBO:0046629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 10","termid":"PBO:0046629"}


id: PBO:0073154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC31 homolog B, COPII coat complex component","termid":"PBO:0073154"}


id: PBO:0065484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome activator subunit 2 pseudogene 3","termid":"PBO:0065484"}


id: PBO:0082574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitin synthase II; catalyzes transfer of N-acetylglucosamine (GlcNAc) to chitin upon activation of zymogenic form; required for chitin synthesis in the primary septum during cytokinesis; localization regulated by Cdk1p during mitosis; phosphorylation by Dbf2p kinase regulates its dynamics and chitin synthesis during cytokinesis","termid":"PBO:0082574"}


id: PBO:0049284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 3","termid":"PBO:0049284"}


id: GO:0031960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a corticosteroid hormone stimulus. A corticosteroid is a steroid hormone that is produced in the adrenal cortex. Corticosteroids are involved in a wide range of physiologic systems such as stress response, immune response and regulation of inflammation, carbohydrate metabolism, protein catabolism, blood electrolyte levels, and behavior. They include glucocorticoids and mineralocorticoids.","definition_xrefs":["PMID:11027914","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to steroid hormone","termid":"GO:0048545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to corticosteroid","synonyms":[{"name":"response to corticosteroid stimulus","type":"exact"}],"termid":"GO:0031960"}


id: PBO:0078723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon TAG) 3-1","termid":"PBO:0078723"}


id: PBO:0043458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNNM3 divergent transcript","termid":"PBO:0043458"}


id: GO:0003010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within voluntary skeletal muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. In the voluntary skeletal muscle, the muscle contraction takes advantage of an ordered sarcomeric structure and it is under voluntary control. Voluntary skeletal muscle is skeletal muscle that is under conscious control.","definition_xrefs":["GOC:mtg_muscle","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal muscle contraction","termid":"GO:0003009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"voluntary skeletal muscle contraction","termid":"GO:0003010"}


id: GO:0009045
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-xylose = D-xylulose.","definition_xrefs":["EC:5.3.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"xylose isomerase activity","secondary_identifiers":["MetaCyc:XYLISOM-RXN","RHEA:22816"],"synonyms":[{"name":"D-xylose aldose-ketose-isomerase activity","type":"related"},{"name":"D-xylose isomerase activity","type":"related"},{"name":"D-xylose ketoisomerase activity","type":"related"},{"name":"D-xylose ketol-isomerase activity","type":"related"}],"termid":"GO:0009045"}


id: GO:0020020
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Vacuole within a parasite used for digestion of the host cell cytoplasm. An example of this component is found in the Apicomplexa.","definition_xrefs":["GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagolysosome","termid":"GO:0032010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005773","GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"food vacuole","secondary_identifiers":["GO:0005772"],"synonyms":[{"name":"digestive vacuole","type":"exact"}],"termid":"GO:0020020"}


id: GO:0060019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroepithelial cells of the neural tube give rise to radial glial cells, specialized bipotential progenitors cells of the brain. Differentiation includes the processes involved in commitment of a cell to a specific fate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell differentiation","termid":"GO:0010001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"radial glial cell differentiation","termid":"GO:0060019"}


id: PBO:0048531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 7","termid":"PBO:0048531"}


id: PBO:0084123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hEST1A/B (SMG5/6)-like protein; contributes to environment-sensing adaptive gene expression responses; Esl2p and Esl1p contain a 14-3-3-like domain and a putative PilT N-terminus ribonuclease domain; interacts with Pex14p; may interact with ribosomes, based on co-purification experiments; green fluorescent protein (GFP)-fusion protein localizes to the nucleus and cytoplasm; ESL2 has a paralog, ESL1, that arose from the whole genome duplication","termid":"PBO:0084123"}


id: PBO:0053702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 904","termid":"PBO:0053702"}


id: GO:0043963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont alters or subverts an adenylate cyclase-mediated signal transduction pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete perturbation of host adenylate cyclase-mediated signal transduction (obsolete GO:0043963)","termid":"GO:0043963"}


id: PBO:0079235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC9 divergent transcript","termid":"PBO:0079235"}


id: PBO:0044020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 gamma 2 pseudogene 1","termid":"PBO:0044020"}


id: PBO:0068167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 474","termid":"PBO:0068167"}


id: GO:1901336
data:
  {"annotated_genes":["SJAG_00265"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070485"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lactone.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lactone biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"lactone anabolism","type":"exact"},{"name":"lactone biosynthesis","type":"exact"},{"name":"lactone formation","type":"exact"},{"name":"lactone synthesis","type":"exact"}],"termid":"GO:1901336","terms_by_termid":{"GO:0070485":null}}


id: PBO:0034309
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-eats","termid":"PBO:0034309"}


id: PR:Q10451
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppr5 gene.","definition_xrefs":["UniProtKB:Q10451","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat-containing protein 5, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1093.01","synonyms":[{"name":"Spom972h-ppr5","type":"exact"}],"termid":"PR:Q10451"}


id: GO:1902314
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to hydroquinone.","definition_xrefs":["GOC:bhm","PMID:15667223","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"hydroquinone binding","synonyms":[{"name":"quinol binding","type":"exact"}],"termid":"GO:1902314"}


id: PBO:0044163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiotrophin 1","termid":"PBO:0044163"}


id: FYPO:0002263
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that enters the cell cycle but then becomes elongated and undergoes cell cycle arrest, and eventually dies without completing cell division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, cell cycle arrest","termid":"FYPO:0001924"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, elongated cell","termid":"FYPO:0004603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000005"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, cell cycle arrest, elongated cell","synonyms":[{"name":"inviable germinated spore, without cell division, cell cycle arrest, elongated cell","type":"exact"},{"name":"lethal after spore germination, without cell division, cell cycle arrest, elongated cell","type":"exact"}],"termid":"FYPO:0002263"}


id: PBO:0026743
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_negative_regulation_of_protein_kinase_activity","termid":"PBO:0026743"}


id: PBO:0047446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc gamma receptor IIb","termid":"PBO:0047446"}


id: PBO:0064540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 1, pseudogene","termid":"PBO:0064540"}


id: PR:Q9UQY2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit beta type-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11599:SF8","PRO:DNx","OMA:SCHPO01989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit beta type-6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.06","secondary_identifiers":["UniProtKB:Q9UQY2"],"synonyms":[{"name":"Spom972h-PSMB1","type":"exact"}],"termid":"PR:Q9UQY2"}


id: PBO:0077325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 63A","termid":"PBO:0077325"}


id: PR:P0CT55
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tef103 gene.","definition_xrefs":["UniProtKB:P0CT55","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor 1-alpha-B/C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.15c","synonyms":[{"name":"EF-1-alpha-B/C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tef103","type":"exact"}],"termid":"PR:P0CT55"}


id: GO:0102001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-isoleucine + 2 O2 + 2 NADPH(4-) + 2 H+ = (E)-2-methylbutanal oxime + 2 NADP(3-) + carbon dioxide + 3 H2O.","definition_xrefs":["EC:1.14.14.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"isoleucine N-monooxygenase (oxime forming) activity","secondary_identifiers":["RHEA:28602","MetaCyc:1.14.13.117-RXN"],"termid":"GO:0102001"}


id: PBO:0000630
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergently orientated to functionally related gene","termid":"PBO:0000630"}


id: PBO:0057248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 450a-2","termid":"PBO:0057248"}


id: GO:0044407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which microorganisms of the same species attach to and grow in or on a host species, and produce extracellular polymers that facilitate attachment and matrix formation, resulting in a change in the microorganisms' growth rate and gene transcription. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-species biofilm formation","termid":"GO:0044010"},{"relation_name":"is_a","term_name":"adhesion of symbiont to host","termid":"GO:0044406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"single-species biofilm formation in or on host organism","termid":"GO:0044407"}


id: GO:0070045
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SNARE complex that contains synaptobrevin 2 (VAMP2), SNAP-25, and syntaxin 2 (or orthologs thereof).","definition_xrefs":["PMID:10336434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNARE complex","termid":"GO:0031201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"synaptobrevin 2-SNAP-25-syntaxin-2 complex","synonyms":[{"name":"SNARE complex (Stx2, Snap25, Vamp2)","type":"narrow"},{"name":"Stx2-Snap25-Vamp2 complex","type":"narrow"}],"termid":"GO:0070045"}


id: PBO:0031789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_fusion_during_conjugation","termid":"PBO:0031789"}


id: PBO:0050117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 27","termid":"PBO:0050117"}


id: PBO:0041869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calsequestrin 1","termid":"PBO:0041869"}


id: GO:0061669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Neurotransmitter secretion that occurs in the absence of the action of a secretagogue or a presynaptic action potential.","definition_xrefs":["GOC:dph","GOC:PARL","GOC:pad","PMID:21334193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"},{"relation_name":"part_of","term_name":"spontaneous synaptic transmission","termid":"GO:0098814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0023052"],"is_obsolete":false,"name":"spontaneous neurotransmitter secretion","synonyms":[{"name":"stimulus-independent neurotransmitter secretion","type":"exact"}],"termid":"GO:0061669"}


id: GO:0015179
data:
  {"annotated_genes":["SJAG_03899","SJAG_00543","SJAG_00626","SJAG_03256","SJAG_04725","SJAG_00522","SJAG_03400","SJAG_04984","SJAG_04718","SJAG_04637","SJAG_04588","SJAG_02029"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92089],"is_not":false,"summary":null,"term":"GO:0015179"},{"annotations":[94290,96304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015187"},{"annotations":[92088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034639"},{"annotations":[93427,96423,99907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061459"},{"annotations":[98868,106076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015182"},{"annotations":[92626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015183"},{"annotations":[92627,99908,94291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005313"},{"annotations":[93428,99909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005290"},{"annotations":[106077,98869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015188"},{"annotations":[106078,93429,98870,99910,96424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015189"},{"annotations":[103961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000064"},{"annotations":[97273,96416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015193"},{"annotations":[99911,86675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015194"},{"annotations":[99912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005302"}]},"cv_name":"molecular_function","definition":"Enables the transfer of an L-amino acid from one side of a membrane to the other. L-amino acids are the L-enantiomers of amino acids.","definition_xrefs":["GOC:ai","GOC:jsg","ISBN:0815340729","GOC:mtg_transport","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00543":null,"SJAG_00626":null,"SJAG_02029":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03899":null,"SJAG_04588":null,"SJAG_04637":null,"SJAG_04718":null,"SJAG_04725":null,"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"L-amino acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-212614"],"synonyms":[{"name":"L-amino acid transporter activity","type":"broad"}],"termid":"GO:0015179","terms_by_termid":{"GO:0000064":null,"GO:0005290":null,"GO:0005302":null,"GO:0005313":null,"GO:0015179":null,"GO:0015182":null,"GO:0015183":null,"GO:0015187":null,"GO:0015188":null,"GO:0015189":null,"GO:0015193":null,"GO:0015194":null,"GO:0034639":null,"GO:0061459":null}}


id: GO:0072112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a glomerular visceral epithelial cell. A glomerular visceral epithelial cell is a specialized epithelial cell that contains 'feet' that interdigitate with the 'feet' of other glomerular epithelial cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal filtration cell differentiation","termid":"GO:0061318"},{"relation_name":"is_a","term_name":"glomerular epithelial cell differentiation","termid":"GO:0072311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"podocyte differentiation","synonyms":[{"name":"glomerular visceral epithelial cell differentiation","type":"exact"}],"termid":"GO:0072112"}


id: GO:0090717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response mediated by reactivated memory T cells and B cells and directed against a previously encountered antigen, being quicker and quantitatively better compared with the primary response.","definition_xrefs":["GOC:add","PMID:26831526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"},{"relation_name":"is_a","term_name":"adaptive immune memory response","termid":"GO:0090716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adaptive immune memory response involving T cells and B cells","termid":"GO:0090717"}


id: PBO:0074522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A14","termid":"PBO:0074522"}


id: GO:0033770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: liquiritigenin + O2 + [reduced NADPH--hemoprotein reductase] = 2,4',7-trihydroxyisoflavanone + H2O + [oxidized NADPH--hemoprotein reductase] and (2S)-naringenin + O2 + [reduced NADPH--hemoprotein reductase] = 2,4',5,7-tetrahydroxyisoflavanone + H2O + [oxidized NADPH--hemoprotein reductase].","definition_xrefs":["EC:1.14.14.87"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2-hydroxyisoflavanone synthase activity","secondary_identifiers":["MetaCyc:RXN-7750","MetaCyc:RXN-1541","GO:0102668","GO:0102604","MetaCyc:RXN-3283"],"synonyms":[{"name":"isoflavonoid synthase","type":"broad"}],"termid":"GO:0033770"}


id: FYPO:0002835
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An RNA metabolism phenotype observed in the vegetative growth phase of the life cycle in which small interfering RNA transcripts derived from the centromere outer repeat region are absent.","definition_xrefs":["PomBase:mah","PMID:20211136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"centromeric outer repeat transcripts absent","termid":"FYPO:0000273"},{"relation_name":"is_a","term_name":"decreased centromeric outer repeat transcript-derived siRNA level","termid":"FYPO:0004201"},{"relation_name":"is_a","term_name":"siRNA absent from cell","termid":"FYPO:0006076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"centromeric outer repeat transcript-derived siRNA absent","synonyms":[{"name":"centromere outer repeat transcript-derived siRNA absent","type":"exact"},{"name":"centromeric outer repeat transcript-derived siRNA absent during mitotic cell cycle","type":"related"},{"name":"centromeric outer repeat transcript-derived siRNA absent during vegetative growth","type":"exact"},{"name":"centromeric outer repeat transcript-derived siRNA undetectable","type":"exact"},{"name":"siRNAs homologous to outer repeats absent","type":"exact"},{"name":"siRNAs homologous to outer repeats undetectable","type":"exact"}],"termid":"FYPO:0002835"}


id: PBO:0042770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEP72 divergent transcript","termid":"PBO:0042770"}


id: PBO:0054636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2041","termid":"PBO:0054636"}


id: GO:0071784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the endoplasmic reticulum (ER) cisternal network. The ER cisternal network is the ER part that comprises the membranes with low curvature in cross-section.","definition_xrefs":["GOC:mah","PMID:16469703","PMID:20434336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"endoplasmic reticulum cisternal network organization","termid":"GO:0071783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum cisternal network assembly","synonyms":[{"name":"ER cisternal network assembly","type":"exact"},{"name":"ER cisternal network formation","type":"exact"},{"name":"endoplasmic reticulum cisternal network formation","type":"exact"}],"termid":"GO:0071784"}


id: PBO:0042568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase inhibitor 2A","termid":"PBO:0042568"}


id: GO:0071229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by the chemical structure of the anion portion of the dissociated acid (rather than the acid acting as a proton donor). The acid chemical may be in gaseous, liquid or solid form.","definition_xrefs":["GOC:mah","GOC:go_curators","Wikipedia:Acid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to acid chemical","termid":"GO:0001101"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to acid chemical","synonyms":[{"name":"cellular response to acid","type":"broad"},{"name":"cellular response to acid anion","type":"related"},{"name":"cellular response to oxoanion","type":"related"}],"termid":"GO:0071229"}


id: RO:0002528
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of downstream of sequence of","direct_ancestors":[{"relation_name":"is_a","term_name":"does_not_overlap_sequence_of","termid":"RO:0002527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_upstream_of_sequence_of","termid":"RO:0002528"}


id: PBO:0027242
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-unequal_nucleolus_inheritance","termid":"PBO:0027242"}


id: GO:1990658
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transferase complex which is capable of transferring nitrogenous groups from one component to another.","definition_xrefs":["PMID:25417112","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"transnitrosylase complex","synonyms":[{"name":"transferase complex, transferring nitrogenous groups","type":"exact"}],"termid":"GO:1990658"}


id: PBO:0078993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon AGT) 1-3","termid":"PBO:0078993"}


id: PBO:0058872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9983","termid":"PBO:0058872"}


id: PBO:0080340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 104 pseudogene","termid":"PBO:0080340"}


id: PBO:0047782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box D3","termid":"PBO:0047782"}


id: PBO:0050250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 28","termid":"PBO:0050250"}


id: GO:0008770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [acyl-carrier protein] + H2O = 4'-phosphopantetheine + apoprotein.","definition_xrefs":["EC:3.1.4.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"[acyl-carrier-protein] phosphodiesterase activity","secondary_identifiers":["MetaCyc:3.1.4.14-RXN","RHEA:20537"],"synonyms":[{"name":"ACP hydrolyase activity","type":"related"},{"name":"ACP phosphodiesterase activity","type":"exact"},{"name":"AcpH","type":"related"},{"name":"[acyl-carrier protein] phosphodiesterase activity","type":"exact"},{"name":"[acyl-carrier-protein] 4'-pantetheine-phosphohydrolase activity","type":"related"},{"name":"acyl-carrier-protein 4'-pantetheine-phosphohydrolase activity","type":"related"},{"name":"acyl-carrier-protein phosphodiesterase activity","type":"related"},{"name":"holo-acyl-carrier-protein 4'-pantetheine-phosphohydrolase activity","type":"related"}],"termid":"GO:0008770"}


id: PBO:0071226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 67","termid":"PBO:0071226"}


id: GO:0008263
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of mismatched pyrimidine bases in DNA. Enzymes with this activity recognize and remove pyrimidines present in mismatches by cleaving the N-C1' glycosidic bond between the target damaged DNA base and the deoxyribose sugar. The reaction releases a free base and leaves an apyrimidinic (AP) site.","definition_xrefs":["PMID:9224623","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch base pair DNA N-glycosylase activity","termid":"GO:0000700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003674","GO:0140097","GO:0003824","GO:0016787","GO:0016798"],"is_obsolete":false,"name":"pyrimidine-specific mismatch base pair DNA N-glycosylase activity","synonyms":[{"name":"G/T-mismatch-specific thymine-DNA glycosylase activity","type":"exact"}],"termid":"GO:0008263"}


id: GO:0047541
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-furoate + ATP + CoA = 2-furoyl-CoA + AMP + diphosphate + H+.","definition_xrefs":["RHEA:19269","EC:6.2.1.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"2-furoate-CoA ligase activity","secondary_identifiers":["KEGG_REACTION:R02986","MetaCyc:2-FUROATE--COA-LIGASE-RXN"],"synonyms":[{"name":"2-furoate:CoA ligase (AMP-forming)","type":"related"},{"name":"2-furoyl coenzyme A synthetase activity","type":"related"}],"termid":"GO:0047541"}


id: GO:0051427
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor for a hormone.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"hormone receptor binding","termid":"GO:0051427"}


id: PBO:0084753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial matrix co-chaperonin; inhibits the ATPase activity of Hsp60p, a mitochondrial chaperonin; involved in protein folding and sorting in the mitochondria; 10 kD heat shock protein with similarity to E. coli groES","termid":"PBO:0084753"}


id: GO:0035874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of copper ions.","definition_xrefs":["PMID:16467469","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"},{"relation_name":"is_a","term_name":"response to copper ion starvation","termid":"GO:0120126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to copper ion starvation","synonyms":[{"name":"cellular response to copper starvation","type":"exact"}],"termid":"GO:0035874"}


id: GO:0050144
data:
  {"annotated_genes":["SJAG_01974"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112178],"is_not":false,"summary":null,"term":"GO:0050144"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-deoxy-D-ribosyl-base1 + base2 = 2-deoxy-D-ribosyl-base2 + base1.","definition_xrefs":["MetaCyc:NUCLEOSIDE-DEOXYRIBOSYLTRANSFERASE-RXN","EC:2.4.2.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01974":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"nucleoside deoxyribosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"deoxyribose transferase activity","type":"related"},{"name":"nucleoside deoxyribosyltransferase I (purine nucleoside:purine deoxyribosyltransferase: strictly specific for transfer between purine bases)","type":"related"},{"name":"nucleoside deoxyribosyltransferase II [purine(pyrimidine) nucleoside:purine(pyrimidine) deoxyribosyltransferase]","type":"related"},{"name":"nucleoside trans-N-deoxyribosylase activity","type":"related"},{"name":"nucleoside:purine(pyrimidine) deoxy-D-ribosyltransferase activity","type":"related"},{"name":"purine(pyrimidine) nucleoside:purine(pyrimidine) deoxyribosyl transferase activity","type":"related"},{"name":"trans-N-deoxyribosylase activity","type":"related"},{"name":"trans-N-glycosidase activity","type":"related"},{"name":"trans-deoxyribosylase activity","type":"related"}],"termid":"GO:0050144","terms_by_termid":{"GO:0050144":null}}


id: FYPO:0007298
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein aggregate center formation is abnormal. Protein aggregate centers are composed of chaperones and misfolded proteins, and are reversibly formed in the nucleus and cytosol to shield thermosensitive proteins from degradation until conditions allow disaggregation and refolding.","definition_xrefs":["PMID:32075773","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein aggregate center formation","synonyms":[{"name":"abnormal PAC formation","type":"exact"},{"name":"abnormal protein aggregate center formation during mitotic cell cycle","type":"related"},{"name":"abnormal protein aggregate center formation during vegetative growth","type":"exact"},{"name":"abnormal protein aggregate centre formation","type":"exact"}],"termid":"FYPO:0007298"}


id: PBO:0087143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein that negatively regulates growth rate; interacts with the 3' UTR of the mitochondrial porin (POR1) mRNA and enhances its degradation; overexpression impairs mitochondrial function; interacts with Dhh1p to mediate POR1 mRNA decay; expressed in stationary phase","termid":"PBO:0087143"}


id: GO:0120323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which one or more ubiquitin groups are added to a lipid.","definition_xrefs":["PMID:34012115","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid modification by small protein conjugation","termid":"GO:0120322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lipid ubiquitination","termid":"GO:0120323"}


id: PBO:0030545
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_cAMP_level","termid":"PBO:0030545"}


id: PR:Q1K9B6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pex22 gene.","definition_xrefs":["UniProtKB:Q1K9B6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19D5.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19D5.02c","synonyms":[{"name":"Spom972h-pex22","type":"exact"}],"termid":"PR:Q1K9B6"}


id: FYPO:0002462
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, branched, septated, and elongated.","definition_xrefs":["PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"},{"relation_name":"is_a","term_name":"branched, elongated, septated cell","termid":"FYPO:0004594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0001320","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"inviable branched, elongated vegetative cell","secondary_identifiers":["FYPO:0002461"],"synonyms":[{"name":"inviable branched cell during vegetative growth","type":"exact"},{"name":"inviable branched vegetative cell","type":"exact"},{"name":"inviable branched vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable branched, elongated cell during vegetative growth","type":"exact"},{"name":"inviable branched, elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable branched, elongated, septated cell","type":"exact"},{"name":"inviable branched, long, septated cell","type":"exact"},{"name":"inviable branched, septated cell","type":"exact"},{"name":"inviable elongated branched cell","type":"exact"},{"name":"lethal; branched, elongated vegetative cell","type":"exact"}],"termid":"FYPO:0002462"}


id: PR:Q9UT14
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9E9.17c gene.","definition_xrefs":["UniProtKB:Q9UT14","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9E9.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.17c","synonyms":[{"name":"Spom972h-SPAC9E9.17c","type":"exact"}],"termid":"PR:Q9UT14"}


id: PATO:0001586
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in a bearer by virtue of whether the bearer exhibits rate variation or change.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability","termid":"PATO:0001303"},{"relation_name":"towards","term_name":"rate","termid":"PATO:0000161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variability of rate","termid":"PATO:0001586"}


id: MOD:01093
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isopropyl lysyl","termid":"MOD:01093"}


id: PBO:0057920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3622b","termid":"PBO:0057920"}


id: PBO:0114136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulphite transmembrane transporter Ssu3","termid":"PBO:0114136"}


id: PBO:0070115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 29 pseudogene","termid":"PBO:0070115"}


id: PBO:0049040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 32","termid":"PBO:0049040"}


id: PR:000037078
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that includes at least one sumoylated lysine.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sumoylated protein","synonyms":[{"name":"Prot/SumoLys+","type":"exact"}],"termid":"PR:000037078"}


id: PBO:0043660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q5, methyltransferase","termid":"PBO:0043660"}


id: GO:0009372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell-cell signaling process in which single-celled organisms carry out coordinated responses by monitoring their own population density, and often also that of other microbes, by producing small, diffusible, signal molecules, detecting the concentration of these molecules, and triggering a signal transduction pathway when a certain threshold is reached. Quorum sensing can occur amongst microbial communities in the environment or within host organisms.","definition_xrefs":["PMID:16497924","GOC:krc","PMID:16630813","PMID:10607620","PMID:8288518","GOC:mlg","PMID:15716452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"is_a","term_name":"detection of cell density","termid":"GO:0060245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"quorum sensing","secondary_identifiers":["Wikipedia:Quorum_sensing","GO:0060247","GO:0010699"],"synonyms":[{"name":"cell-cell signaling involved in quorum sensing","type":"related"},{"name":"detection of cell density by secreted molecule","type":"related"},{"name":"quorum sensing system","type":"exact"}],"termid":"GO:0009372"}


id: GO:0044353
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded, uncoated intracellular vesicle formed by the process of micropinocytosis.","definition_xrefs":["PMID:14732047","PMID:14731589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pinosome","termid":"GO:0044352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575","GO:0005768"],"is_obsolete":false,"name":"micropinosome","termid":"GO:0044353"}


id: GO:0070417
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.","definition_xrefs":["GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cold","termid":"GO:0009409"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cold","synonyms":[{"name":"cellular response to cold stress","type":"exact"}],"termid":"GO:0070417"}


id: PBO:0018279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Noc2p-Noc3p complex subunit Noc3","termid":"PBO:0018279"}


id: GO:1905639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitochondrial mRNA catabolic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:27122350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitochondrial RNA catabolic process","termid":"GO:0000962"},{"relation_name":"is_a","term_name":"positive regulation of mRNA catabolic process","termid":"GO:0061014"},{"relation_name":"is_a","term_name":"regulation of mitochondrial mRNA catabolic process","termid":"GO:1905637"},{"relation_name":"positively_regulates","term_name":"mitochondrial mRNA catabolic process","termid":"GO:0000958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"positive regulation of mitochondrial mRNA catabolic process","synonyms":[{"name":"activation of mitochondrial mRNA catabolic process","type":"narrow"},{"name":"up regulation of mitochondrial mRNA catabolic process","type":"exact"},{"name":"up-regulation of mitochondrial mRNA catabolic process","type":"exact"},{"name":"upregulation of mitochondrial mRNA catabolic process","type":"exact"}],"termid":"GO:1905639"}


id: PBO:0064451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POF1B actin binding protein","termid":"PBO:0064451"}


id: PBO:0076454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transgelin 2","termid":"PBO:0076454"}


id: GO:0046715
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107023],"is_not":false,"summary":null,"term":"GO:0046715"}]},"cv_name":"molecular_function","definition":"Enables the transport of borate across a membrane against the concentration gradient.","definition_xrefs":["PMID:12447444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"},{"relation_name":"is_a","term_name":"active transmembrane transporter activity","termid":"GO:0022804"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"active borate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0080138"],"synonyms":[{"name":"borate transmembrane transporter activity","type":"broad"},{"name":"borate uptake transmembrane transporter activity","type":"related"},{"name":"boron transmembrane transporter activity","type":"related"},{"name":"boron uptake transmembrane transporter activity","type":"related"},{"name":"efflux-type borate transporter","type":"narrow"},{"name":"efflux-type boron transporter","type":"related"}],"termid":"GO:0046715","terms_by_termid":{"GO:0046715":null}}


id: GO:0034993
data:
  {"annotated_genes":["SJAG_05196","SJAG_04558","SJAG_01538"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92775,98873,108901],"is_not":false,"summary":null,"term":"GO:0034993"},{"annotations":[92778,98881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990612"}]},"cv_name":"cellular_component","definition":"A nuclear membrane protein complex which connects the nuclear outer and inner membranes together, and links links the nuclear lumen to cytoplasmic microtubules during meiosis.","definition_xrefs":["GOC:mah","PMID:18692466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane microtubule tethering complex","termid":"GO:0106094"},{"relation_name":"part_of","term_name":"microtubule organizing center attachment site","termid":"GO:0034992"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01538":null,"SJAG_04558":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"meiotic nuclear membrane microtubule tethering complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"LINC complex","type":"exact"},{"name":"LInker of Nucleoskeleton and Cytoskeleton complex","type":"exact"},{"name":"SUN-KASH complex","type":"exact"}],"termid":"GO:0034993","terms_by_termid":{"GO:0034993":null,"GO:1990612":null}}


id: FYPO:0005593
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of inositol phosphorylceramide measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular inositol phosphorylceramide level","synonyms":[{"name":"increased cellular IPC level","type":"exact"},{"name":"increased cellular inositol phosphorylceramide level during mitotic cell cycle","type":"related"},{"name":"increased cellular inositol phosphorylceramide level during vegetative growth","type":"exact"},{"name":"increased inositol phosphorylceramide accumulation","type":"related"}],"termid":"FYPO:0005593"}


id: PBO:0058909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 12127","termid":"PBO:0058909"}


id: GO:1902625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter that results in negative regulation of induction of conjugation with cellular fusion.","definition_xrefs":["PMID:9671458","GO_REF:0000063","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of induction of conjugation with cellular fusion by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1902625)","termid":"GO:1902625"}


id: PBO:0041433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 90","termid":"PBO:0041433"}


id: GO:0008127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + O2 + quercetin = 2-(3,4-dihydroxybenzoyloxy)-4,6-dihydroxybenzoate + CO.","definition_xrefs":["EC:1.13.11.24","RHEA:15381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"quercetin 2,3-dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-8953398","MetaCyc:QUERCETIN-23-DIOXYGENASE-RXN","KEGG_REACTION:R02156","UM-BBD_reactionID:r0891"],"synonyms":[{"name":"flavonol 2,4-oxygenase activity","type":"related"},{"name":"quercetin:oxygen 2,3-oxidoreductase (decyclizing)","type":"related"},{"name":"quercetinase activity","type":"related"}],"termid":"GO:0008127"}


id: GO:1900454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of long term synaptic depression.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of long-term synaptic depression","termid":"GO:1900452"},{"relation_name":"positively_regulates","term_name":"long-term synaptic depression","termid":"GO:0060292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of long-term synaptic depression","synonyms":[{"name":"activation of LTD","type":"related"},{"name":"activation of long term depression","type":"broad"},{"name":"activation of long term synaptic depression","type":"narrow"},{"name":"positive regulation of LTD","type":"related"},{"name":"positive regulation of long term depression","type":"broad"},{"name":"positive regulation of long term synaptic depression","type":"exact"},{"name":"up regulation of LTD","type":"related"},{"name":"up regulation of long term depression","type":"broad"},{"name":"up regulation of long term synaptic depression","type":"exact"},{"name":"up-regulation of LTD","type":"related"},{"name":"up-regulation of long term depression","type":"broad"},{"name":"up-regulation of long term synaptic depression","type":"exact"},{"name":"upregulation of LTD","type":"related"},{"name":"upregulation of long term depression","type":"broad"},{"name":"upregulation of long term synaptic depression","type":"exact"}],"termid":"GO:1900454"}


id: PBO:0076105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 10","termid":"PBO:0076105"}


id: PR:Q10351
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gpi17 gene.","definition_xrefs":["UniProtKB:Q10351","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI transamidase component PIG-S homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F12.09","synonyms":[{"name":"Spom972h-gpi17","type":"exact"}],"termid":"PR:Q10351"}


id: PBO:0005282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sim4 and Mal2 associated (4 and 2 associated) protein 4","termid":"PBO:0005282"}


id: GO:0051623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of norepinephrine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of norepinephrine uptake","termid":"GO:0051621"},{"relation_name":"positively_regulates","term_name":"norepinephrine uptake","termid":"GO:0051620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of norepinephrine uptake","synonyms":[{"name":"activation of norepinephrine uptake","type":"narrow"},{"name":"positive regulation of levarterenol uptake","type":"exact"},{"name":"positive regulation of noradrenaline uptake","type":"exact"},{"name":"positive regulation of norepinephrine import","type":"exact"},{"name":"stimulation of norepinephrine uptake","type":"narrow"},{"name":"up regulation of norepinephrine uptake","type":"exact"},{"name":"up-regulation of norepinephrine uptake","type":"exact"},{"name":"upregulation of norepinephrine uptake","type":"exact"}],"termid":"GO:0051623"}


id: GO:0006168
data:
  {"annotated_genes":["SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89588],"is_not":false,"summary":null,"term":"GO:0006168"}]},"cv_name":"biological_process","definition":"Any process that generates adenine, 6-aminopurine, from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase salvage","termid":"GO:0043096"},{"relation_name":"is_a","term_name":"adenine biosynthetic process","termid":"GO:0046084"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01859":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"adenine salvage","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenine salvage pathway","type":"exact"},{"name":"adenine, hypoxanthine and their nucleoside salvage","type":"broad"}],"termid":"GO:0006168","terms_by_termid":{"GO:0006168":null}}


id: PBO:0059714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 22","termid":"PBO:0059714"}


id: PBO:0061479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear respiratory factor 1","termid":"PBO:0061479"}


id: PR:Q10494
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC26F1.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C26F1.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.07","synonyms":[{"name":"Spom972h-SPAC26F1.07","type":"exact"}],"termid":"PR:Q10494"}


id: PBO:0111330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Mak16","termid":"PBO:0111330"}


id: PBO:0005785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexed with Cdc5 protein Cwf26","termid":"PBO:0005785"}


id: GO:0052913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + guanosine(966) in 16S rRNA = N(2)-methylguanosine(966) in 16S rRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (guanine-N2-)-methyltransferase activity","termid":"GO:0008990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003824","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"16S rRNA (guanine(966)-N(2))-methyltransferase activity","secondary_identifiers":["RHEA:23548","MetaCyc:RXN0-6515"],"termid":"GO:0052913"}


id: PBO:0016934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium transport regulatory factor (predicted)","termid":"PBO:0016934"}


id: PBO:0069260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 516, pseudogene","termid":"PBO:0069260"}


id: SO:0001832
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of immunoglobulin sequence, either constant or variable.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"immunoglobulin_region","synonyms":[{"name":"immunoglobulin region","type":"exact"}],"termid":"SO:0001832"}


id: MOD:00233
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-lysine residue and 5'-phosphoguanosine through a phosphoramide ester bond to form N6-(phospho-5'-guanosine)-L-lysine.","definition_xrefs":["RESID:AA0228","PubMed:6092377","Unimod:413#K","PubMed:6264433","DeltaMass:304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"guanylated residue","termid":"MOD:01163"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-(phospho-5'-guanosine)-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(5'-guanosine phosphonamino)hexanoic acid","type":"exact"},{"name":"5'-guanylic-N6-L-lysine","type":"exact"},{"name":"5'phos Guanosyl","type":"exact"},{"name":"ACT_SITE N6-GMP-lysine intermediate","type":"exact"},{"name":"L-lysine monoanhydride with 5'-guanylic acid","type":"exact"},{"name":"N(zeta)-5'-guanylic-lysine","type":"exact"},{"name":"N6-(5'-guanylyl)-lysine","type":"exact"},{"name":"N6-(phospho-5'-guanosine)-L-lysine","type":"exact"},{"name":"N6-L-lysine 5'-guanosine phosphoramidester","type":"exact"},{"name":"N6GMPLys","type":"exact"},{"name":"Phosphoguanosine","type":"related"},{"name":"epsilon-5'-guanylic-L-lysine","type":"exact"},{"name":"lysine guanosine-5'-monophosphate","type":"exact"},{"name":"phospho-guanosine","type":"related"}],"termid":"MOD:00233"}


id: PBO:0034176
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-contributes_to_condition","termid":"PBO:0034176"}


id: PBO:0062128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily D member 8 pseudogene","termid":"PBO:0062128"}


id: PBO:0086742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; possible role in DNA metabolism and/or in genome stability; expression is heat-inducible","termid":"PBO:0086742"}


id: PBO:0083485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene VHS3/YOR054C","termid":"PBO:0083485"}


id: PBO:0034215
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_evidence","termid":"PBO:0034215"}


id: PBO:0091717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Mis19/Eic1","termid":"PBO:0091717"}


id: PBO:0004620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Thi5","termid":"PBO:0004620"}


id: GO:0002026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent of heart contraction, changing the force with which blood is propelled.","definition_xrefs":["GOC:tb","GOC:dph","PMID:10358008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart contraction","termid":"GO:0008016"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of the force of heart contraction","synonyms":[{"name":"cardiac inotropy","type":"exact"},{"name":"heart inotropy","type":"exact"}],"termid":"GO:0002026"}


id: GO:0034163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 9 signaling pathway.","definition_xrefs":["PMID:17328678","PMID:16551253","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"toll-like receptor 9 signaling pathway","termid":"GO:0034162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of toll-like receptor 9 signaling pathway","synonyms":[{"name":"regulation of TLR9 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 9 signalling pathway","type":"exact"}],"termid":"GO:0034163"}


id: GO:0019571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-arabinose, the D-enantiomer of arabino-pentose.","definition_xrefs":["GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arabinose catabolic process","termid":"GO:0019568"},{"relation_name":"is_a","term_name":"D-arabinose metabolic process","termid":"GO:0046372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"D-arabinose catabolic process","synonyms":[{"name":"D-arabinose breakdown","type":"exact"},{"name":"D-arabinose catabolism","type":"exact"},{"name":"D-arabinose degradation","type":"exact"}],"termid":"GO:0019571"}


id: PBO:0109353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase holoenzyme complex subunit Thc1","termid":"PBO:0109353"}


id: PBO:0065365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin and Sec7 domain containing","termid":"PBO:0065365"}


id: PBO:0001354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase, spliceosomal (predicted)","termid":"PBO:0001354"}


id: GO:0034660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving non-coding RNA transcripts (ncRNAs).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ncRNA metabolic process (obsolete GO:0034660)","synonyms":[{"name":"ncRNA metabolism","type":"exact"}],"termid":"GO:0034660"}


id: FYPO:0000659
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA binding by a gene product does not occur, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA binding","termid":"FYPO:0000656"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000653"],"is_obsolete":false,"name":"abolished DNA binding","synonyms":[{"name":"DNA binding abolished","type":"exact"}],"termid":"FYPO:0000659"}


id: PBO:0079550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 3","termid":"PBO:0079550"}


id: GO:0140560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: UDP-alpha-D-xylose + [protein with EGF-like domain]-3-O-(alpha-D-xylosyl-(1->3)-beta-D-glucosyl)-L-serine = UDP + [protein with EGF-like domain]-3-O-(alpha-D-xylosyl-(1->3)-alpha-D-xylosyl-(1->3)-beta-D-glucosyl)-L-serine. The enzyme, found in animals and insects, is involved in the biosynthesis of the alpha-D-xylosyl-(1->3)-alpha-D-xylosyl-(1->3)- beta-D-glucosyl trisaccharide on epidermal growth factor-like (EGF- like) domains.","definition_xrefs":["PMID:22117070","PMID:8982869","RHEA:22820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"xylosyl alpha-1,3-xylosyltransferase activity","secondary_identifiers":["EC:2.4.2.62"],"termid":"GO:0140560"}


id: FYPO:0005370
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which occurrence of errors, usually small deletions, upon repair of double-strand breaks in DNA by nonhomologous end joining is increased.","definition_xrefs":["PomBase:mah","PMID:11226171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair via nonhomologous end joining","termid":"FYPO:0003661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000298","FYPO:0001985","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"decreased fidelity of double-strand break repair via nonhomologous end joining","termid":"FYPO:0005370"}


id: FYPO:0003422
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that is elongated and tapered, i.e. tapers at one end to a diameter smaller than the other, contains more than one septum, and undergoes two or more rounds of cell division and then dies.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated multiseptate vegetative cell","termid":"FYPO:0001494"},{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, septated cell with abnormal morphology","termid":"FYPO:0002450"},{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, elongated tapered cell","termid":"FYPO:0002733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0000005","FYPO:0000032","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, elongated multiseptate tapered cell","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, elongated multiseptate bottle-shaped cell","type":"exact"},{"name":"inviable after spore germination, multiple cell divisions, elongated multiseptate bottle/skittle cell","type":"exact"},{"name":"inviable after spore germination, multiple cell divisions, elongated multiseptate skittle-shaped cell","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, elongated multiseptate tapered cell","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, elongated multiseptate tapered cell","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, elongated multiseptate tapered cell","type":"exact"}],"termid":"FYPO:0003422"}


id: GO:0035481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell that contributes to heart induction.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Notch signaling pathway involved in heart induction (obsolete GO:0035481)","synonyms":[{"name":"positive regulation of Notch signalling pathway involved in heart induction","type":"exact"}],"termid":"GO:0035481"}


id: PBO:0035880
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0035880"}


id: GO:0021986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the habenula over time from its initial formation until its mature state. The habenula is the group of nuclei that makes up the stalk of the pineal gland.","definition_xrefs":["GOC:jid","GOC:dph","GO_REF:0000021","GOC:dgh","ISBN:9780721601465","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"epithalamus development","termid":"GO:0021538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"habenula development","termid":"GO:0021986"}


id: PBO:0000816
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.8.1","termid":"PBO:0000816"}


id: GO:0016106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sesquiterpenoid compounds, terpenoids with three isoprene units.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid metabolic process","termid":"GO:0006714"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sesquiterpenoid biosynthetic process","synonyms":[{"name":"sesquiterpenoid anabolism","type":"exact"},{"name":"sesquiterpenoid biosynthesis","type":"exact"},{"name":"sesquiterpenoid formation","type":"exact"},{"name":"sesquiterpenoid synthesis","type":"exact"}],"termid":"GO:0016106"}


id: PBO:0000876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fusion cytochrome c oxidase assembly protein Cox1101, mitochondrial ribosomal protein Rsm22 (predicted)","termid":"PBO:0000876"}


id: PBO:0012854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1 Arrest Defective","termid":"PBO:0012854"}


id: GO:0021536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the diencephalon over time, from its formation to the mature structure. The diencephalon is the paired caudal parts of the prosencephalon from which the thalamus, hypothalamus, epithalamus and subthalamus are derived; these regions regulate autonomic, visceral and endocrine function, and process information directed to the cerebral cortex.","definition_xrefs":["GOC:cls","ISBN:0838580343","GOC:jid","GO_REF:0000021","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"forebrain development","termid":"GO:0030900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"diencephalon development","termid":"GO:0021536"}


id: PATO:0001285
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of yellow hue and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"yellow","termid":"PATO:0000324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated yellow","synonyms":[{"name":"bright yellow","type":"related"}],"termid":"PATO:0001285"}


id: PBO:0050121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 31","termid":"PBO:0050121"}


id: PBO:0061768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine decarboxylase antizyme 3","termid":"PBO:0061768"}


id: GO:0003854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-beta-hydroxy-delta(5)-steroid + NAD+ = a 3-oxo-delta(5)-steroid + NADH + H+. Also acts on on 3-beta-hydroxypregn-5-en-20-one to form progesterone.","definition_xrefs":["EC:1.1.1.145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-beta-hydroxy-delta5-steroid dehydrogenase (NAD+) activity","secondary_identifiers":["Reactome:R-HSA-196372","Reactome:R-HSA-193816","Reactome:R-HSA-196350","Reactome:R-HSA-192097","Reactome:R-HSA-193789","MetaCyc:1.1.1.145-RXN"],"synonyms":[{"name":"3-beta-hydroxy-5-ene steroid dehydrogenase activity","type":"related"},{"name":"3-beta-hydroxy-D5-steroid dehydrogenase activity","type":"exact"},{"name":"3beta-HSDH","type":"related"},{"name":"3beta-hydroxy steroid dehydrogenase/isomerase activity","type":"related"},{"name":"3beta-hydroxy-5-ene steroid dehydrogenase activity","type":"related"},{"name":"3beta-hydroxy-5-ene-steroid dehydrogenase activity","type":"related"},{"name":"3beta-hydroxy-5-ene-steroid oxidoreductase activity","type":"related"},{"name":"3beta-hydroxy-delta5-C27-steroid dehydrogenase/isomerase activity","type":"related"},{"name":"3beta-hydroxy-delta5-C27-steroid oxidoreductase","type":"broad"},{"name":"3beta-hydroxy-delta5-steroid dehydrogenase activity","type":"related"},{"name":"3beta-hydroxy-delta5-steroid:NAD+ 3-oxidoreductase activity","type":"related"},{"name":"5-ene-3-beta-hydroxysteroid dehydrogenase activity","type":"related"},{"name":"delta5-3beta-hydroxysteroid dehydrogenase activity","type":"related"},{"name":"progesterone reductase activity","type":"broad"},{"name":"steroid-delta5-3beta-ol dehydrogenase activity","type":"related"}],"termid":"GO:0003854"}


id: SO:1000013
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transition of a thymine to a cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine_transition","termid":"SO:1000010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T_to_C_transition","synonyms":[{"name":"T to C transition","type":"exact"}],"termid":"SO:1000013"}


id: PBO:0086713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; mutant has long chronological lifespan; has homology to Staphylococcus aureus nuclease; GFP-fusion protein localizes to mitochondria; is induced in response to the DNA-damaging agent MMS","termid":"PBO:0086713"}


id: PBO:0040514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA wax alcohol acyltransferase 1","termid":"PBO:0040514"}


id: PBO:0065882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB32, member RAS oncogene family","termid":"PBO:0065882"}


id: GO:2000082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of L-ascorbic acid biosynthetic process.","definition_xrefs":["PMID:19395407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of vitamin metabolic process","termid":"GO:0030656"},{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of carbohydrate biosynthetic process","termid":"GO:0043255"},{"relation_name":"regulates","term_name":"L-ascorbic acid biosynthetic process","termid":"GO:0019853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0006766","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of L-ascorbic acid biosynthetic process","synonyms":[{"name":"regulation of L-ascorbic acid anabolism","type":"exact"},{"name":"regulation of L-ascorbic acid biosynthesis","type":"exact"},{"name":"regulation of L-ascorbic acid formation","type":"exact"},{"name":"regulation of L-ascorbic acid synthesis","type":"exact"},{"name":"regulation of ascorbate biosynthesis","type":"exact"},{"name":"regulation of ascorbate biosynthetic process","type":"exact"},{"name":"regulation of vitamin C biosynthesis","type":"exact"},{"name":"regulation of vitamin C biosynthetic process","type":"exact"}],"termid":"GO:2000082"}


id: FYPO:0002956
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_03783:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03783","name":"vps24delta","uniquename":"SJAG_03783:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03892:allele-2":{"allele_type":"amino_acid_mutation","description":"E233Q","gene_uniquename":"SJAG_03892","name":"Vps4-EQ","uniquename":"SJAG_03892:allele-2"},"SJAG_03892:allele-3":{"allele_type":"amino_acid_mutation","description":"I307T L327S","gene_uniquename":"SJAG_03892","name":"vps4-ts","uniquename":"SJAG_03892:allele-3"},"SJAG_04489:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04489","name":"did4delta","uniquename":"SJAG_04489:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007771"}],"single_locus_phenotype":[{"annotations":[115391,115409,115410,115411,115412,115381,115382,115389,115392,115388,115407,115408,115405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007771"},{"annotations":[115385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007073"},{"annotations":[115384],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04489":null,"SJAG_05207":null},"genotype_count":9,"genotypes_by_uniquename":{"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"Vps4-EQ(E233Q aa)","display_uniquename":"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-2","expression":"Not assayed or wild 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type"}]}]},"did4delta":{"display_name":"did4delta","display_uniquename":"did4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04489:allele-1","expression":"Null"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"nur1delta":{"display_name":"nur1delta","display_uniquename":"nur1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]}]},"vps24delta":{"display_name":"vps24delta","display_uniquename":"vps24delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03783:allele-1","expression":"Null"}]}]},"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"vps4-ts(I307T L327S aa)","display_uniquename":"vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-3","expression":"Not assayed or wild type"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03892","SJAG_05207"],"name":"abnormal protein localization to nucleus","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03783","SJAG_04489","SJAG_05207","SJAG_01050","SJAG_01745","SJAG_03892"],"single_locus_genotype_uniquenames":["Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","did4delta","vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","nur1delta","lem2delta","vps4delta","cmp7delta","vps24delta"],"synonyms":[{"name":"abnormal protein localisation to nucleus","type":"exact"}],"termid":"FYPO:0002956","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0003657":null,"FYPO:0007073":null,"FYPO:0007771":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: FYPO:0002758
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of 4-nitroquinoline N-oxide than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002682","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"resistance to 4-nitroquinoline N-oxide","synonyms":[{"name":"resistance to 4-NQO","type":"exact"},{"name":"resistance to 4-nitroquinoline N-oxide during mitotic cell cycle","type":"related"},{"name":"resistance to 4-nitroquinoline N-oxide during vegetative growth","type":"exact"},{"name":"resistance to 4NQO","type":"exact"},{"name":"resistant to 4-nitroquinoline N-oxide","type":"exact"}],"termid":"FYPO:0002758"}


id: FYPO:0004447
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is not normally found in the prospore membrane is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein","termid":"FYPO:0003452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"protein mislocalized to prospore membrane","synonyms":[{"name":"protein mislocalised to prospore membrane","type":"exact"},{"name":"protein mislocalized to forespore membrane","type":"exact"}],"termid":"FYPO:0004447"}


id: PBO:0030487
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_malonic_acid_import","termid":"PBO:0030487"}


id: MOD:01564
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ8plex-118 reporter+balance group.","definition_xrefs":["Unimod:731#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-118 reporter+balance reagent acylated residue","termid":"MOD:01563"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated N-terminal","termid":"MOD:01712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-118 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01564"}


id: SO:0002210
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variation qualifying the presence of a sequence in a genome which is entirely missing in another genome.","definition_xrefs":["BCS:bbean","PMID:19956538","PMID:25881062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copy_number_variation","termid":"SO:0001019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"presence_absence_variation","synonyms":[{"name":"PAV","type":"exact"},{"name":"presence absence variation","type":"exact"},{"name":"presence-absence variation","type":"exact"},{"name":"presence-absence_variation","type":"exact"},{"name":"presence/absence variation","type":"exact"},{"name":"presence/absence_variation","type":"exact"}],"termid":"SO:0002210"}


id: GO:0046540
data:
  {"annotated_genes":["SJAG_00414","SJAG_04538","SJAG_04433","SJAG_05240","SJAG_01870","SJAG_00531","SJAG_04405","SJAG_01634","SJAG_03410","SJAG_02304","SJAG_00147","SJAG_02279","SJAG_04497","SJAG_02843","SJAG_00989","SJAG_03954","SJAG_04529","SJAG_03469","SJAG_02455","SJAG_02469","SJAG_03070","SJAG_03369","SJAG_01327","SJAG_01301","SJAG_02295","SJAG_01819","SJAG_01308","SJAG_03460","SJAG_00643","SJAG_04222"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85598,89001,89160,89368,90982,91241,91608,91665,91885,94075,94846,96689,98250,98609,101878,101920,102389,102590,104588,106117,106686,107194,107768,108947,110426,110926,111001,111277,111937,112483],"is_not":false,"summary":null,"term":"GO:0046540"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that is formed by the association of the U4/U6 and U5 snRNPs.","definition_xrefs":["GOC:pr","GOC:krc","ISBN:0879695897","PMID:11867543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal tri-snRNP complex","termid":"GO:0097526"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00147":null,"SJAG_00414":null,"SJAG_00531":null,"SJAG_00643":null,"SJAG_00989":null,"SJAG_01301":null,"SJAG_01308":null,"SJAG_01327":null,"SJAG_01634":null,"SJAG_01819":null,"SJAG_01870":null,"SJAG_02279":null,"SJAG_02295":null,"SJAG_02304":null,"SJAG_02455":null,"SJAG_02469":null,"SJAG_02843":null,"SJAG_03070":null,"SJAG_03369":null,"SJAG_03410":null,"SJAG_03460":null,"SJAG_03469":null,"SJAG_03954":null,"SJAG_04222":null,"SJAG_04405":null,"SJAG_04433":null,"SJAG_04497":null,"SJAG_04529":null,"SJAG_04538":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"U4/U6.U5 snRNP complex","type":"exact"}],"termid":"GO:0046540","terms_by_termid":{"GO:0046540":null}}


id: GO:2000889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cellodextrin.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"},{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cellodextrin metabolic process","synonyms":[{"name":"cellodextrin metabolism","type":"exact"}],"termid":"GO:2000889"}


id: PBO:0069344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 604, pseudogene","termid":"PBO:0069344"}


id: PBO:0029180
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-alpha,alpha-trehalase_activity_increase_abolished_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0029180"}


id: PR:O14156
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein phosphatase 1K, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13832:SF93","OMA:SCHPO01064","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2C homolog 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.03c","secondary_identifiers":["UniProtKB:O14156"],"synonyms":[{"name":"PP2C-4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPM1K","type":"exact"}],"termid":"PR:O14156"}


id: GO:0000117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that regulates transcription such that the target genes are transcribed as part of the G2/M transition of the mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in G2/M transition of mitotic cell cycle (obsolete GO:0000117)","synonyms":[{"name":"G2/M-specific transcription in mitotic cell cycle","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter during G2/M transition of mitotic cell cycle","type":"related"}],"termid":"GO:0000117"}


id: GO:0120041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macrophage proliferation.","definition_xrefs":["GOC:BHF_miRNA","GOC:BHF","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte proliferation","termid":"GO:0070665"},{"relation_name":"is_a","term_name":"regulation of macrophage proliferation","termid":"GO:0120040"},{"relation_name":"positively_regulates","term_name":"macrophage proliferation","termid":"GO:0061517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage proliferation","termid":"GO:0120041"}


id: PBO:0113160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSP70 family ATP-binding protein; role in protein folding and vacuolar protein import; required for Ub-dependent degradation of short-lived proteins; associated with the chaperonin-containing T-complex; unique specificity in propagation of [URE3] prions and vacuolar degradation of gluconeogenic enzymes; contributes to tRNA nuclear import during starvation; targeted to vacuoles via the AP-3 pathway; localizes to exosomes during heat stress with a role in thermotolerance; 98% identity with Ssa1p","termid":"PBO:0113160"}


id: PR:Q10298
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppa3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein phosphatase C22H10.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.04","synonyms":[{"name":"Spom972h-ppa3","type":"exact"}],"termid":"PR:Q10298"}


id: PBO:0055529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2964","termid":"PBO:0055529"}


id: FYPO:0002493
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA 5'-adenosine monophosphate hydrolase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA 5'-adenosine monophosphate hydrolase activity","termid":"FYPO:0002491"},{"relation_name":"is_a","term_name":"decreased nuclease activity","termid":"FYPO:0004253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"decreased DNA 5'-adenosine monophosphate hydrolase activity","synonyms":[{"name":"reduced DNA 5'-adenosine monophosphate hydrolase activity","type":"exact"}],"termid":"FYPO:0002493"}


id: PATO:0000868
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000868 vibrissae reflex value (obsolete PATO:0000868)","termid":"PATO:0000868"}


id: PATO:0001997
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An amount which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"present","termid":"PATO:0000467"},{"relation_name":"is_a","term_name":"decreased quality","termid":"PATO:0002301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased amount","secondary_identifiers":["PATO:0000468","PATO:0000419"],"synonyms":[{"name":"decreased","type":"related"},{"name":"decreased number","type":"exact"},{"name":"present in fewer numbers in organism","type":"exact"},{"name":"reduced","type":"related"},{"name":"subnumerary","type":"related"}],"termid":"PATO:0001997"}


id: PBO:0059009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane metalloendopeptidase","termid":"PBO:0059009"}


id: PBO:0050298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 like 3","termid":"PBO:0050298"}


id: PR:P23636
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppa2 gene.","definition_xrefs":["UniProtKB:P23636","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major serine/threonine-protein phosphatase PP2A-2 catalytic subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.07c","synonyms":[{"name":"Spom972h-ppa2","type":"exact"}],"termid":"PR:P23636"}


id: PBO:0061076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NTPase KAP family P-loop domain containing 1","termid":"PBO:0061076"}


id: PBO:0034373
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-overlaps_sequence_of","termid":"PBO:0034373"}


id: PBO:0079296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 13","termid":"PBO:0079296"}


id: PBO:0026735
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_cell_cycle_regulation_upon_nitrogen_source_shift","termid":"PBO:0026735"}


id: GO:0016518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with interleukin-14 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete interleukin-14 receptor activity (obsolete GO:0016518)","synonyms":[{"name":"IL-14 receptor activity","type":"exact"},{"name":"IL-14R","type":"exact"}],"termid":"GO:0016518"}


id: PBO:0060378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin regulatory factor","termid":"PBO:0060378"}


id: FYPO:0006219
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which vegetative cell population growth is cell population growth is normal (i.e. indistinguishable from wild type) under conditions of potassium ion starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002060","FYPO:0002057","FYPO:0000257","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"normal cell population growth during potassium ion starvation","synonyms":[{"name":"normal cell population growth during potassium ion depletion","type":"exact"},{"name":"normal cell population growth during potassium ion deprivation","type":"exact"},{"name":"normal cell population growth during potassium starvation","type":"exact"},{"name":"normal cell population growth in response to potassium ion starvation","type":"exact"},{"name":"normal vegetative cell population growth during potassium ion starvation","type":"exact"}],"termid":"FYPO:0006219"}


id: PBO:0050274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 4","termid":"PBO:0050274"}


id: GO:0045521
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-25 receptor.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-25 receptor binding","synonyms":[{"name":"IL-25","type":"narrow"},{"name":"interleukin-25 receptor ligand","type":"narrow"}],"termid":"GO:0045521"}


id: PBO:0001174
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.16","termid":"PBO:0001174"}


id: GO:0051318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle 'gap' phase which is the interval between the completion of DNA segregation (usually by mitosis or meiosis) and the beginning of DNA synthesis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"},{"relation_name":"part_of","term_name":"interphase","termid":"GO:0051325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"G1 phase","secondary_identifiers":["Wikipedia:G1_phase"],"termid":"GO:0051318"}


id: PATO:0002405
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's disposition to be reduced to smaller pieces with little effort.","definition_xrefs":["Wikipedia:https://en.wikipedia.org/wiki/Friability"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"friability","termid":"PATO:0002405"}


id: GO:0050132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-methyl-L-alanine + H2O + NADP+ = H+ + methylammonium + NADPH + pyruvate.","definition_xrefs":["EC:1.4.1.17","RHEA:21768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"N-methylalanine dehydrogenase activity","secondary_identifiers":["MetaCyc:N-METHYLALANINE-DEHYDROGENASE-RXN","KEGG_REACTION:R01584"],"synonyms":[{"name":"N-methyl-L-alanine:NADP+ oxidoreductase (demethylating, deaminating)","type":"related"}],"termid":"GO:0050132"}


id: PBO:0042950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 4","termid":"PBO:0042950"}


id: PBO:0113229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglucosamine (GlcNAc) kinase; requires a divalent cation and a broad range of NTPs as phosphoryl donor to generate GlcNAc-6-phosphate, a substrate for glycan biosynthesis; promotes UDP-GlcNAc biosynthesis a precursor for chitin production; phylogenically distinct from known GlcNAc kinases and hexokinases; transcript is upregulated during sporulation and the unfolded protein response; contains a hexokinase-like ATPase domain; non-essential gene","termid":"PBO:0113229"}


id: FYPO:0003304
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which formation of the mitotic spindle midzone, the area in the center of the mitotic spindle where the spindle microtubules from opposite poles overlap, is abnormal.","definition_xrefs":["GO:0051256","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle elongation","termid":"FYPO:0000131"},{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly","termid":"FYPO:0000177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000054","FYPO:0000641","FYPO:0000337","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic spindle midzone assembly","synonyms":[{"name":"abnormal mitotic spindle midzone assembly during vegetative growth","type":"exact"},{"name":"abnormal spindle midzone assembly during mitotic cell cycle","type":"related"},{"name":"abnormal spindle midzone assembly involved in mitosis","type":"exact"}],"termid":"FYPO:0003304"}


id: GO:0098892
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the postsynaptic specialization membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mf","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of postsynaptic membrane","termid":"GO:0098890"},{"relation_name":"part_of","term_name":"postsynaptic specialization membrane","termid":"GO:0099634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of postsynaptic specialization membrane","termid":"GO:0098892"}


id: FYPO:0007195
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which mitochondria are larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial morphology","termid":"FYPO:0000359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"large mitochondria","synonyms":[{"name":"enlarged mitochondria","type":"exact"},{"name":"large mitochondria during mitotic cell cycle","type":"related"},{"name":"large mitochondria during vegetative growth","type":"exact"}],"termid":"FYPO:0007195"}


id: GO:0000003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The production of new individuals that contain some portion of genetic material inherited from one or more parent organisms.","definition_xrefs":["GOC:go_curators","ISBN:0198506732","GOC:isa_complete","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete reproduction (obsolete GO:0000003)","synonyms":[{"name":"reproductive physiological process","type":"exact"}],"termid":"GO:0000003"}


id: PBO:0045711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DAZ interacting zinc finger protein 1 like","termid":"PBO:0045711"}


id: PBO:0051429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-9","termid":"PBO:0051429"}


id: PR:Q9USY0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug131 gene.","definition_xrefs":["UniProtKB:Q9USY0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 131 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1861.06c","synonyms":[{"name":"Spom972h-mug131","type":"exact"}],"termid":"PR:Q9USY0"}


id: GO:0002652
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of tolerance induction dependent upon immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"is_a","term_name":"regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002822"},{"relation_name":"regulates","term_name":"tolerance induction dependent upon immune response","termid":"GO:0002461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tolerance induction dependent upon immune response","synonyms":[{"name":"regulation of immune response-dependent tolerance induction","type":"exact"}],"termid":"GO:0002652"}


id: GO:0046363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ribitol, a pentitol derived formally by reduction of the -CHO group of either D- or L-ribose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribitol metabolic process","termid":"GO:0019349"},{"relation_name":"is_a","term_name":"pentitol catabolic process","termid":"GO:0019527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"ribitol catabolic process","synonyms":[{"name":"ribitol breakdown","type":"exact"},{"name":"ribitol catabolism","type":"exact"},{"name":"ribitol degradation","type":"exact"}],"termid":"GO:0046363"}


id: PBO:0062259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily D member 15 pseudogene","termid":"PBO:0062259"}


id: PBO:0085173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-mannosylated heat shock protein; secreted and covalently attached to the cell wall via beta-1,3-glucan and disulfide bridges; required for cell wall stability; induced by heat shock, oxidative stress, and nitrogen limitation; HSP150 has a paralog, PIR3, that arose from the whole genome duplication","termid":"PBO:0085173"}


id: PBO:0000791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase Alg10 (predicted)","termid":"PBO:0000791"}


id: GO:1900265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of substance P receptor binding.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor binding","termid":"GO:1900120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of substance P receptor binding","synonyms":[{"name":"regulation of neurokinin-1 receptor binding","type":"exact"},{"name":"regulation of substance P receptor ligand","type":"narrow"}],"termid":"GO:1900265"}


id: PBO:0038687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTA2 antisense RNA 1","termid":"PBO:0038687"}


id: PBO:0079407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 1","termid":"PBO:0079407"}


id: PBO:0000454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-DHHC type","termid":"PBO:0000454"}


id: PBO:0002696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Sap145 (predicted)","termid":"PBO:0002696"}


id: PBO:0055620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3059","termid":"PBO:0055620"}


id: PBO:0038364
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_regulated_by","termid":"PBO:0038364"}


id: GO:0016051
data:
  {"annotated_genes":["SJAG_01531","SJAG_01209","SJAG_04073","SJAG_00876","SJAG_01376","SJAG_01288","SJAG_02590","SJAG_04666","SJAG_02916","SJAG_04509","SJAG_02278","SJAG_00424","SJAG_03705","SJAG_01835","SJAG_05285","SJAG_03123","SJAG_04878","SJAG_04483","SJAG_00963","SJAG_04771","SJAG_01862","SJAG_01028","SJAG_04236","SJAG_01787","SJAG_01453","SJAG_01290","SJAG_00409","SJAG_04184","SJAG_04668","SJAG_00182","SJAG_02446","SJAG_03057","SJAG_01426","SJAG_00218","SJAG_01963","SJAG_02222","SJAG_00129","SJAG_01646","SJAG_00183","SJAG_01427","SJAG_04462","SJAG_00610","SJAG_03587","SJAG_01012"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86651,90275,98517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"},{"annotations":[96679,101809,89385,91310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051072"},{"annotations":[110447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030979"},{"annotations":[90522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[105351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034412"},{"annotations":[87642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051274"},{"annotations":[110448,85209,105128,113863,100236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[87632,105353,109230,87643,102147,103831,84137,111889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[98703,104667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070880"},{"annotations":[102149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051278"},{"annotations":[102545,90037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006114"},{"annotations":[104953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005978"},{"annotations":[77666,86986],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045719"},{"annotations":[88463],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0060635"},{"annotations":[88467,83591],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[83964],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032951"},{"annotations":[98911,88469,88452,101391,113979,86828],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"},{"annotations":[98913,90995,85504,88473],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"},{"annotations":[92586,62021,87896,89397,93207,97118,104954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005992"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_00183":null,"SJAG_00218":null,"SJAG_00409":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_00963":null,"SJAG_01012":null,"SJAG_01028":null,"SJAG_01209":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01376":null,"SJAG_01426":null,"SJAG_01427":null,"SJAG_01453":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_01862":null,"SJAG_01963":null,"SJAG_02222":null,"SJAG_02278":null,"SJAG_02446":null,"SJAG_02590":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_03123":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04073":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04509":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_04878":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"carbohydrate biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006093"],"synonyms":[{"name":"anabolic carbohydrate metabolic process","type":"exact"},{"name":"anabolic carbohydrate metabolism","type":"exact"},{"name":"carbohydrate anabolism","type":"exact"},{"name":"carbohydrate biosynthesis","type":"exact"},{"name":"carbohydrate formation","type":"exact"},{"name":"carbohydrate synthesis","type":"exact"}],"termid":"GO:0016051","terms_by_termid":{"GO:0005978":null,"GO:0005992":null,"GO:0006078":null,"GO:0006114":null,"GO:0030979":null,"GO:0032951":null,"GO:0034412":null,"GO:0034413":null,"GO:0045719":null,"GO:0051072":null,"GO:0051274":null,"GO:0051278":null,"GO:0060635":null,"GO:0070600":null,"GO:0070610":null,"GO:0070880":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0088023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP protein involved in splicing; interacts with the branchpoint-binding protein during the formation of the second commitment complex","termid":"PBO:0088023"}


id: PBO:0071565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 31","termid":"PBO:0071565"}


id: PBO:0012030
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously annotated as SPBTRNAASP.03","termid":"PBO:0012030"}


id: PBO:0075712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRGAP3 antisense RNA 1","termid":"PBO:0075712"}


id: GO:0039536
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the RIG-I signaling pathway.","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"is_a","term_name":"regulation of RIG-I signaling pathway","termid":"GO:0039535"},{"relation_name":"negatively_regulates","term_name":"RIG-I signaling pathway","termid":"GO:0039529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of RIG-I signaling pathway","synonyms":[{"name":"negative regulation of DDX58 signaling pathway","type":"exact"},{"name":"negative regulation of RIG-I signalling pathway","type":"exact"},{"name":"negative regulation of retinoic acid inducible gene I signaling pathway","type":"exact"}],"termid":"GO:0039536"}


id: GO:0047715
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + hypotaurocyamine = N(omega)-phosphohypotaurocyamine + ADP + 2 H+.","definition_xrefs":["RHEA:24008","EC:2.7.3.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, nitrogenous group as acceptor","termid":"GO:0016775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"hypotaurocyamine kinase activity","secondary_identifiers":["KEGG_REACTION:R03939","MetaCyc:HYPOTAUROCYAMINE-KINASE-RXN"],"synonyms":[{"name":"ATP:hypotaurocyamine N-phosphotransferase activity","type":"related"}],"termid":"GO:0047715"}


id: GO:0031989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by a bombesin binding to its receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"bombesin receptor signaling pathway","synonyms":[{"name":"bombesin receptor signalling pathway","type":"exact"}],"termid":"GO:0031989"}


id: PBO:0087573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TFIIH complex; involved in transcription initiation, similar to 34 kDa subunit of human TFIIH; interacts with Ssl1p","termid":"PBO:0087573"}


id: PBO:0061545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5', 3'-nucleotidase, cytosolic","termid":"PBO:0061545"}


id: PBO:0031367
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA_recombination","termid":"PBO:0031367"}


id: PBO:0062103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 1 pseudogene","termid":"PBO:0062103"}


id: PBO:0053855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1124","termid":"PBO:0053855"}


id: PBO:0039756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APP divergent transcript","termid":"PBO:0039756"}


id: PBO:0058086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4303","termid":"PBO:0058086"}


id: PBO:0055451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2883","termid":"PBO:0055451"}


id: GO:0097178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a ruffle, a projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork. The formation of ruffles (also called membrane ruffling) is thought to be controlled by a group of enzymes known as Rho GTPases, specifically RhoA, Rac1 and cdc42.","definition_xrefs":["Wikipedia:Membrane_ruffling","PMID:12556481","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ruffle organization","termid":"GO:0031529"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"ruffle assembly","synonyms":[{"name":"membrane ruffle formation","type":"exact"},{"name":"membrane ruffling","type":"exact"}],"termid":"GO:0097178"}


id: PBO:0077692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNFAIP3 interacting protein 3","termid":"PBO:0077692"}


id: GO:0140361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cyclic-GMP-AMP from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:31126740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"purine ribonucleotide transport","termid":"GO:0015868"},{"relation_name":"is_a","term_name":"adenine nucleotide transport","termid":"GO:0051503"},{"relation_name":"is_a","term_name":"cyclic nucleotide transport","termid":"GO:0070729"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"guanine nucleotide transmembrane transport","termid":"GO:1903790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"cyclic-GMP-AMP transmembrane import across plasma membrane","termid":"GO:0140361"}


id: PBO:0035965
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Rad52_foci_during_cellular_response_to_acetaldehyde","termid":"PBO:0035965"}


id: SO:0001445
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polar, hydorophilic amino acid encoded by the codons ACN (ACT, ACC, ACA and ACG).","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine","synonyms":[{"name":"T","type":"exact"},{"name":"Thr","type":"exact"}],"termid":"SO:0001445"}


id: GO:0032645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of granulocyte macrophage colony-stimulating factor production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"regulates","term_name":"granulocyte macrophage colony-stimulating factor production","termid":"GO:0032604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of granulocyte macrophage colony-stimulating factor production","secondary_identifiers":["GO:0045423"],"synonyms":[{"name":"regulation of GM-CSF production","type":"exact"},{"name":"regulation of granulocyte macrophage colony stimulating factor production","type":"exact"},{"name":"regulation of granulocyte macrophage colony-stimulating factor biosynthetic process","type":"narrow"}],"termid":"GO:0032645"}


id: PBO:0090981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPs/CORVET complex ubiquitin protein ligase E3 subunit Vps11","termid":"PBO:0090981"}


id: PBO:0083212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF URA7; identified by expression profiling and mass spectrometry","termid":"PBO:0083212"}


id: PBO:0071044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 46","termid":"PBO:0071044"}


id: GO:0016972
data:
  {"annotated_genes":["SJAG_03992","SJAG_00196","SJAG_01647","SJAG_02489","SJAG_02827"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94556,106889,110850],"is_not":false,"summary":null,"term":"GO:0016972"},{"annotations":[93203,99251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016971"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 R'C(R)SH + O2 = R'C(R)S-S(R)CR' + 2 H2O2.","definition_xrefs":["RHEA:17357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disulfide oxidoreductase activity","termid":"GO:0015036"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","termid":"GO:0016670"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_01647":null,"SJAG_02489":null,"SJAG_02827":null,"SJAG_03992":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0015036"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0015036","GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"thiol oxidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.8.3.2","MetaCyc:THIOL-OXIDASE-RXN","UM-BBD_reactionID:r1293"],"synonyms":[{"name":"sulfhydryl oxidase activity","type":"related"},{"name":"thiol:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0016972","terms_by_termid":{"GO:0016971":null,"GO:0016972":null}}


id: PBO:0038925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor G7","termid":"PBO:0038925"}


id: GO:1905188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metaphase/anaphase transition of meiosis I.","definition_xrefs":["PMID:21389117","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metaphase/anaphase transition of meiotic cell cycle","termid":"GO:1902104"},{"relation_name":"is_a","term_name":"regulation of metaphase/anaphase transition of meiosis I","termid":"GO:1905186"},{"relation_name":"positively_regulates","term_name":"metaphase/anaphase transition of meiosis I","termid":"GO:1990949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of metaphase/anaphase transition of meiosis I","synonyms":[{"name":"positive regulation of meiosis I metaphase/anaphase transition","type":"exact"}],"termid":"GO:1905188"}


id: PBO:0059556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Tyr (UAU/C)","termid":"PBO:0059556"}


id: PBO:0053001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit gamma 1","termid":"PBO:0053001"}


id: GO:0007139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which follows anaphase II of meiosis and during which the chromosomes arrive at the poles of the cell and the division of the cytoplasm starts.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telophase","termid":"GO:0051326"},{"relation_name":"is_a","term_name":"meiosis II cell cycle phase","termid":"GO:0098765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meiotic telophase II","termid":"GO:0007139"}


id: FYPO:0004849
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115632,115631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[115624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a protein metabolic process is normal (i.e. indistinguishable from wild type). A protein metabolic process is a series of chemical reactions and pathways involving a specific protein.","definition_xrefs":["GO:0019538","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process","termid":"FYPO:0002496"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03689","SJAG_03118","SJAG_02621"],"name":"normal protein metabolic process","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"normal cellular protein metabolic process","type":"exact"},{"name":"normal protein metabolism","type":"exact"}],"termid":"FYPO:0004849","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0006989":null}}


id: GO:0032325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the molybdopterin cofactor (Moco), essential for the catalytic activity of some enzymes, e.g. sulfite oxidase, xanthine dehydrogenase, and aldehyde oxidase. The cofactor consists of a mononuclear molybdenum (Mo-molybdopterin) or tungsten ion (W-molybdopterin) coordinated by one or two molybdopterin ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdopterin cofactor metabolic process","termid":"GO:0043545"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molybdopterin cofactor catabolic process","termid":"GO:0032325"}


id: GO:0034321
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: octanoyl-CoA + an alcohol = CoA + an octyl ester.","definition_xrefs":["GOC:mah","PMID:16361250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"},{"relation_name":"is_a","term_name":"octanoyltransferase activity","termid":"GO:0016415"},{"relation_name":"is_a","term_name":"alcohol O-acyltransferase activity","termid":"GO:0034318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"alcohol O-octanoyltransferase activity","termid":"GO:0034321"}


id: PBO:0060233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYB proto-oncogene, transcription factor","termid":"PBO:0060233"}


id: PBO:0087954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation termination factor eRF3; has a role in mRNA deadenylation and decay; altered protein conformation creates the [PSI(+)] prion that modifies cellular fitness, alters translational fidelity by affecting reading frame selection, and results in a nonsense suppressor phenotype; many stress-response genes are repressed in the presence of [PSI(+)]","termid":"PBO:0087954"}


id: GO:0047596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-methylsalicylate + H+ = 3-cresol + CO2.","definition_xrefs":["EC:4.1.1.52","RHEA:23112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"6-methylsalicylate decarboxylase activity","secondary_identifiers":["MetaCyc:6-METHYLSALICYLATE-DECARBOXYLASE-RXN","KEGG_REACTION:R03567"],"synonyms":[{"name":"6-MSA decarboxylase activity","type":"related"},{"name":"6-methylsalicylate carboxy-lyase (3-cresol-forming)","type":"related"},{"name":"6-methylsalicylate carboxy-lyase activity","type":"related"},{"name":"6-methylsalicylic acid (2,6-cresotic acid) decarboxylase activity","type":"related"}],"termid":"GO:0047596"}


id: FYPO:0003439
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a septum that has branches. For example, the septum may be Y-shaped.","definition_xrefs":["PMID:24798735","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum morphology during vegetative growth","termid":"FYPO:0002023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000032","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"branched septum","synonyms":[{"name":"branched septum during mitotic cell cycle","type":"related"},{"name":"branched septum during vegetative growth","type":"exact"}],"termid":"FYPO:0003439"}


id: PR:P30821
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A flavoprotein wrbA that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P25 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.14c","secondary_identifiers":["UniProtKB:P30821"],"synonyms":[{"name":"Spom972h-wrbA","type":"exact"},{"name":"brefeldin A resistance protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P30821"}


id: GO:0044027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An epigenetic gene regulation mechanism that negatively regulates gene expression by methylation of cytosine residues in chromosomal CpG islands. CpG islands are genomic regions that contain a high frequency of the CG dinucleotide associated with the transcription start site of genes.","definition_xrefs":["Wikipedia:Cpg_island","PMID:11898023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gene expression, epigenetic","termid":"GO:0045814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"negative regulation of gene expression via chromosomal CpG island methylation","synonyms":[{"name":"DNA hypermethylation of CG island","type":"related"},{"name":"DNA hypermethylation of CpG island","type":"exact"},{"name":"epigenetic regulation of gene expression via CpG island hypermethylation","type":"exact"},{"name":"hypermethylation of CpG island","type":"exact"},{"name":"maintenance of DNA methylation","type":"broad"},{"name":"negative regulation of gene expression via CpG island hypermethylation","type":"exact"},{"name":"negative regulation of gene expression via CpG island methylation","type":"related"},{"name":"negative regulation of gene expression via chromosomal CG dinucleotide methylation","type":"related"},{"name":"negative regulation of gene expression via chromosomal CpG dinucleotide methylation","type":"exact"},{"name":"negative regulation of gene expression via chromosomal DNA cytosine methylation","type":"exact"}],"termid":"GO:0044027"}


id: PBO:0015248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER associated protein disulfide isomerase Pdi3","termid":"PBO:0015248"}


id: PBO:0002821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set3 complex subunit Snt1","termid":"PBO:0002821"}


id: PBO:0028362
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiseptate_cell_in_stationary_phase","termid":"PBO:0028362"}


id: GO:0097687
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A horn-shaped dinoflagellate antapex found in thecate species.","definition_xrefs":["PMID:7002229","GOC:at"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinoflagellate antapex","termid":"GO:0097684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dinoflagellate antapical horn","termid":"GO:0097687"}


id: PBO:0083502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified non essential genes ERV2/YPR037C and TIP41/YPR040W","termid":"PBO:0083502"}


id: PBO:0083906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Flavin-linked sulfhydryl oxidase localized to the ER lumen; involved in disulfide bond formation within the endoplasmic reticulum (ER)","termid":"PBO:0083906"}


id: PBO:0076740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 11 like 2","termid":"PBO:0076740"}


id: FYPO:0006905
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which a mitotic cell size control checkpoint is normal (i.e. indistinguishable from wild type). A mitotic cell size control checkpoint normally prevents cell cycle progression from G1 to S phase until the cell reaches a certain size.","definition_xrefs":["PomBase:mah","GO:0031568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell size control checkpoint","termid":"FYPO:0006904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0001312","FYPO:0000298","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic G1 cell size control checkpoint","synonyms":[{"name":"normal G1 cell size control checkpoint during mitotic cell cycle","type":"exact"},{"name":"normal mitotic G1 cell size control checkpoint activation","type":"exact"},{"name":"normal mitotic G1 cell size control checkpoint during vegetative growth","type":"exact"}],"termid":"FYPO:0006905"}


id: GO:1904024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glucose catabolic process to lactate via pyruvate.","definition_xrefs":["PMID:20935145","GOC:dph","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of fermentation","termid":"GO:1901003"},{"relation_name":"is_a","term_name":"regulation of glucose catabolic process to lactate via pyruvate","termid":"GO:1904023"},{"relation_name":"negatively_regulates","term_name":"glucose catabolic process to lactate via pyruvate","termid":"GO:0019661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0006091","GO:0044281"],"is_obsolete":false,"name":"negative regulation of glucose catabolic process to lactate via pyruvate","synonyms":[{"name":"down regulation of glucose catabolic process to lactate via pyruvate","type":"exact"},{"name":"down regulation of glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"down regulation of homofermentation","type":"exact"},{"name":"down regulation of homofermentative lactate fermentation","type":"exact"},{"name":"down regulation of homofermentative pathway","type":"exact"},{"name":"down regulation of homolactate fermentation","type":"exact"},{"name":"down regulation of homolactic fermentation","type":"exact"},{"name":"down-regulation of glucose catabolic process to lactate via pyruvate","type":"exact"},{"name":"down-regulation of glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"down-regulation of homofermentation","type":"exact"},{"name":"down-regulation of homofermentative lactate fermentation","type":"exact"},{"name":"down-regulation of homofermentative pathway","type":"exact"},{"name":"down-regulation of homolactate fermentation","type":"exact"},{"name":"down-regulation of homolactic fermentation","type":"exact"},{"name":"downregulation of glucose catabolic process to lactate via pyruvate","type":"exact"},{"name":"downregulation of glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"downregulation of homofermentation","type":"exact"},{"name":"downregulation of homofermentative lactate fermentation","type":"exact"},{"name":"downregulation of homofermentative pathway","type":"exact"},{"name":"downregulation of homolactate fermentation","type":"exact"},{"name":"downregulation of homolactic fermentation","type":"exact"},{"name":"inhibition of glucose catabolic process to lactate via pyruvate","type":"narrow"},{"name":"inhibition of glucose fermentation to lactate via pyruvate","type":"narrow"},{"name":"inhibition of homofermentation","type":"narrow"},{"name":"inhibition of homofermentative lactate fermentation","type":"narrow"},{"name":"inhibition of homofermentative pathway","type":"narrow"},{"name":"inhibition of homolactate fermentation","type":"narrow"},{"name":"inhibition of homolactic fermentation","type":"narrow"},{"name":"negative regulation of glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"negative regulation of homofermentation","type":"exact"},{"name":"negative regulation of homofermentative lactate fermentation","type":"exact"},{"name":"negative regulation of homofermentative pathway","type":"exact"},{"name":"negative regulation of homolactate fermentation","type":"exact"},{"name":"negative regulation of homolactic fermentation","type":"exact"}],"termid":"GO:1904024"}


id: GO:0031882
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 5 somatostatin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatostatin receptor binding","termid":"GO:0031877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type 5 somatostatin receptor binding","synonyms":[{"name":"type 5 somatostatin receptor ligand","type":"narrow"}],"termid":"GO:0031882"}


id: PBO:0073519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain binding protein 1","termid":"PBO:0073519"}


id: GO:0061602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction CTP + molybdenum cofactor = diphosphate + cytidylyl molybdenum cofactor.","definition_xrefs":["EC:2.7.7.76","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016779","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"molybdenum cofactor cytidylyltransferase activity","secondary_identifiers":["RHEA:31335"],"termid":"GO:0061602"}


id: GO:0047055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-reticuline + [reduced NADPH--hemoprotein reductase] + O2 -> salutaridine + [oxidized NADPH--hemoprotein reductase] + 2 H2O.","definition_xrefs":["RHEA:17713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"salutaridine synthase activity","secondary_identifiers":["KEGG_REACTION:R04696","MetaCyc:1.1.3.35-RXN","EC:1.14.19.67"],"synonyms":[{"name":"(R)-reticuline oxidase (C-C phenol-coupling) activity","type":"related"}],"termid":"GO:0047055"}


id: GO:0035152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Ensuring that tracheal cells form and maintain tubular structures with the correct size and shape for their position in the network. This is essential for efficient flow of gases through the tracheal network.","definition_xrefs":["GOC:mtg_sensu","PMID:14570584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tube architecture, open tracheal system","synonyms":[{"name":"regulation of tracheal tube architecture","type":"exact"}],"termid":"GO:0035152"}


id: GO:0031274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the assembly of pseudopodia.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pseudopodium assembly","termid":"GO:0031272"},{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"positively_regulates","term_name":"pseudopodium assembly","termid":"GO:0031269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of pseudopodium assembly","synonyms":[{"name":"activation of pseudopodium formation","type":"narrow"},{"name":"positive regulation of pseudopodium formation","type":"related"},{"name":"stimulation of pseudopodium formation","type":"narrow"},{"name":"up regulation of pseudopodium formation","type":"related"},{"name":"up-regulation of pseudopodium formation","type":"related"},{"name":"upregulation of pseudopodium formation","type":"related"}],"termid":"GO:0031274"}


id: GO:1900851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pseurotin A biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of pseurotin A biosynthetic process","termid":"GO:1900849"},{"relation_name":"positively_regulates","term_name":"pseurotin A biosynthetic process","termid":"GO:1900790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of pseurotin A biosynthetic process","synonyms":[{"name":"up regulation of pseurotin A biosynthetic process","type":"exact"},{"name":"up-regulation of pseurotin A biosynthetic process","type":"exact"},{"name":"upregulation of pseurotin A biosynthetic process","type":"exact"}],"termid":"GO:1900851"}


id: SO:0001582
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A codon variant that changes at least one base of the first codon of a transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_sequence_variant","termid":"SO:0001580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"initiator_codon_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html","loinc:LA6695-6","http://vat.gersteinlab.org/formats.php"],"synonyms":[{"name":"Jannovar:initiator_codon_variant","type":"exact"},{"name":"VAT:startOverlap","type":"exact"},{"name":"initiatior codon variant","type":"exact"},{"name":"initiator codon change","type":"exact"},{"name":"snpEff:NON_SYNONYMOUS_START","type":"related"}],"termid":"SO:0001582"}


id: PBO:0004461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream activation factor complex subunit Acr1","termid":"PBO:0004461"}


id: PR:Q9USR9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cnp3 gene.","definition_xrefs":["UniProtKB:Q9USR9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1861.01c","synonyms":[{"name":"CENP-C homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cnp3","type":"exact"}],"termid":"PR:Q9USR9"}


id: FYPO:0000646
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell has a larger volume than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen cell","termid":"FYPO:0000025"},{"relation_name":"is_a","term_name":"abnormal vegetative cell morphology","termid":"FYPO:0001118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"swollen vegetative cell","synonyms":[{"name":"enlarged vegetative cell","type":"related"},{"name":"increased vegetative cell size","type":"related"},{"name":"increased vegetative cell volume","type":"exact"},{"name":"large vegetative cell","type":"related"}],"termid":"FYPO:0000646"}


id: PBO:0056051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LUC7 like","termid":"PBO:0056051"}


id: PBO:0080621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 62","termid":"PBO:0080621"}


id: PBO:0087849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trans-aconitate methyltransferase; cytosolic enzyme that catalyzes the methyl esterification of 3-isopropylmalate, an intermediate of the leucine biosynthetic pathway, and trans-aconitate, which inhibits the citric acid cycle","termid":"PBO:0087849"}


id: PR:Q9HGL0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC800.12c gene.","definition_xrefs":["UniProtKB:Q9HGL0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ubiquitin-like protein C800.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.12c","synonyms":[{"name":"Spom972h-SPBC800.12c","type":"exact"}],"termid":"PR:Q9HGL0"}


id: PBO:0068580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 31, pseudogene","termid":"PBO:0068580"}


id: GO:0061956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The infiltration by sperm of the cumulus oophorus to reach the oocyte. The process involves digestive enzymes from a modified lysosome called the acrosome, situated at the head of the sperm.","definition_xrefs":["PMID:21380641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"penetration of cumulus oophorus","synonyms":[{"name":"penetration of cumulus cells layer","type":"exact"},{"name":"penetration of cumulus mass","type":"exact"}],"termid":"GO:0061956"}


id: FYPO:0003719
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing tributyltin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0002060","FYPO:0002058","FYPO:0000257","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on tributyltin","synonyms":[{"name":"normal cell population growth in presence of tributyltin","type":"exact"},{"name":"normal cell population growth on tributylstannane","type":"exact"},{"name":"normal cell population growth on tributyltin","type":"exact"},{"name":"normal cellular response to tributyltin","type":"related"},{"name":"normal vegetative cell population growth on tributyltin","type":"exact"}],"termid":"FYPO:0003719"}


id: GO:0042386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the characteristics of a mature hemocyte. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) which are involved in defense and clotting of hemolymph, but not involved in transport of oxygen.","definition_xrefs":["CL:0000387","PMID:9550723","GOC:jl","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemocyte differentiation","synonyms":[{"name":"arthropod blood cell differentiation","type":"exact"}],"termid":"GO:0042386"}


id: GO:0070399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of wall teichoic acid, which is a major component of the cell wall of Gram-positive bacteria and typically consists of a polymer of glycerol-phosphate or ribitol-phosphate to which are attached glycosyl and D-alanyl ester residues and which is covalently linked to peptidoglycan.","definition_xrefs":["GOC:add","PMID:14665680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wall teichoic acid metabolic process","termid":"GO:0070397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wall teichoic acid catabolic process","synonyms":[{"name":"wall teichoic acid breakdown","type":"exact"},{"name":"wall teichoic acid catabolism","type":"exact"},{"name":"wall teichoic acid degradation","type":"exact"}],"termid":"GO:0070399"}


id: GO:0070459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of prolactin, a peptide hormone that stimulates lactation, from secretory granules in the anterior pituitary.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"prolactin secretion","termid":"GO:0070459"}


id: GO:0009115
data:
  {"annotated_genes":["SJAG_04297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113435],"is_not":false,"summary":null,"term":"GO:0009115"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of xanthine, 2,6-dihydroxypurine, a purine formed in the metabolic breakdown of guanine but not present in nucleic acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase catabolic process","termid":"GO:0006145"},{"relation_name":"is_a","term_name":"xanthine metabolic process","termid":"GO:0046110"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04297":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"xanthine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006151"],"synonyms":[{"name":"xanthine breakdown","type":"exact"},{"name":"xanthine catabolism","type":"exact"},{"name":"xanthine degradation","type":"exact"},{"name":"xanthine oxidation","type":"narrow"}],"termid":"GO:0009115","terms_by_termid":{"GO:0009115":null}}


id: PBO:0076627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGF-beta induced lncRNA","termid":"PBO:0076627"}


id: PBO:0052038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jun proto-oncogene, AP-1 transcription factor subunit","termid":"PBO:0052038"}


id: PBO:0053338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 205","termid":"PBO:0053338"}


id: PBO:0047052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM111 trypsin like peptidase B","termid":"PBO:0047052"}


id: GO:0004649
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of poly(ADP-ribose) at glycosidic (1''-2') linkage of ribose-ribose bond to produce free ADP-ribose.","definition_xrefs":["EC:3.2.1.143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"poly(ADP-ribose) glycohydrolase activity","secondary_identifiers":["MetaCyc:3.2.1.143-RXN","Reactome:R-HSA-8952903","RHEA:52216","Reactome:R-HSA-5651828"],"termid":"GO:0004649"}


id: MOD:00411
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label. OBSOLETE because Unimod:18 is now merged with entry 258 remap to MOD:00581 'single 018 label'","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00411 O18 label (obsolete MOD:00411)","termid":"MOD:00411"}


id: GO:0072671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of proteins transported from mitochondria and targeted to cytoplasmic proteasomes for degradation as a response to oxidative stress conditions.","definition_xrefs":["GOC:mcc","PMID:21070972","PMID:21109188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome-mediated ubiquitin-dependent protein catabolic process","termid":"GO:0043161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"mitochondria-associated ubiquitin-dependent protein catabolic process","synonyms":[{"name":"MAD","type":"exact"},{"name":"mitochondria-associated protein catabolic process","type":"exact"},{"name":"mitochondria-associated protein degradation","type":"exact"},{"name":"mitochondrion-associated protein catabolic process","type":"exact"}],"termid":"GO:0072671"}


id: PATO:0001756
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A conductivity quality inhering in a bearer by virtue of the bearer's disposition to spontaneous transfer of thermal energy from a region of higher temperature to a region of lower temperature.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Heat_conduction"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conductivity","termid":"PATO:0001585"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat conductivity","synonyms":[{"name":"thermal conduction","type":"exact"}],"termid":"PATO:0001756"}


id: PBO:0073742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC2A1 divergent transcript","termid":"PBO:0073742"}


id: FYPO:0001422
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular metabolism phenotype observed in the vegetative growth phase of the life cycle in which the observed occurrence of protein processing is decreased.","definition_xrefs":["PMID:19520858","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein processing during vegetative growth","termid":"FYPO:0001421"},{"relation_name":"is_a","term_name":"decreased proteolysis during vegetative growth","termid":"FYPO:0005443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002494","FYPO:0006551","FYPO:0002274","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein processing during vegetative growth","synonyms":[{"name":"decreased Sre1 cleavage","type":"narrow"},{"name":"decreased protein cleavage during vegetative growth","type":"related"},{"name":"decreased protein maturation by peptide bond cleavage during vegetative growth","type":"exact"},{"name":"decreased protein maturation by peptide bond hydrolysis during vegetative growth","type":"exact"},{"name":"decreased protein processing during mitotic cell cycle","type":"related"},{"name":"reduced protein processing during vegetative growth","type":"exact"}],"termid":"FYPO:0001422"}


