# terms

id: PBO:0091061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Pol5","termid":"PBO:0091061"}


id: PBO:0039589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin 7","termid":"PBO:0039589"}


id: FYPO:0003758
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic spindle elongation begins, but mitotic sister chromatid segregation stops before completing separation of chromosomes.","definition_xrefs":["PomBase:mah","PomBase:vw","PMID:8978688"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abolished mitotic sister chromatid separation","termid":"FYPO:0001946"},{"relation_name":"is_a","term_name":"abolished mitotic sister chromatid separation","termid":"FYPO:0001946"},{"relation_name":"is_a","term_name":"incomplete mitotic sister chromatid segregation","termid":"FYPO:0003757"},{"relation_name":"output_of","term_name":"abnormal mitotic cell cycle arrest with replicated DNA","termid":"FYPO:0000444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000337","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"mitotic spindle elongation without chromosome separation","synonyms":[{"name":"archery-bow phenotype","type":"exact"},{"name":"incomplete mitotic sister chromatid segregation, with elongated mitotic spindle and unseparated DNA","type":"exact"},{"name":"incomplete mitotic sister chromatid segregation, with unseparated DNA","type":"exact"},{"name":"incomplete mitotic sister chromatid separation, with unseparated DNA","type":"related"},{"name":"spindle elongation in absence of chromosome separation","type":"exact"},{"name":"spindle elongation without chromosome separation during mitotic cell cycle","type":"related"},{"name":"spindle elongation without chromosome separation during vegetative growth","type":"exact"}],"termid":"FYPO:0003758"}


id: GO:0033515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-lysine into other compounds, including alpha-aminoadipate; in this pathway, L-lysine is converted to 2-aminoadipate-6-semialdehyde by lysine 6-aminotransferase.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine catabolic process to acetyl-CoA","termid":"GO:0019474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248","GO:0006520","GO:0055086","GO:0006790"],"is_obsolete":false,"name":"L-lysine catabolic process using lysine 6-aminotransferase","synonyms":[{"name":"L-lysine breakdown using lysine 6-aminotransferase","type":"exact"},{"name":"L-lysine degradation using lysine 6-aminotransferase","type":"exact"}],"termid":"GO:0033515"}


id: GO:0030996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the mitotic cell cycle is halted during one of the normal phases (G1, S, G2, M) as a result of deprivation of nitrogen.","definition_xrefs":["GOC:mah","GOC:vw","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic cell cycle arrest in response to nitrogen starvation (obsolete GO:0030996)","synonyms":[{"name":"cell cycle arrest in response to nitrogen starvation","type":"broad"}],"termid":"GO:0030996"}


id: GO:0000464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage within Internal Transcribed Spacer 1 (ITS1) upstream of the 5.8S rRNA derived from an originally tricistronic rRNA transcript that contained the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript. In S. cerevisiae, this endonucleolytic cleavage within ITS1 initiates the maturation of the LSU and the 5.8S rRNAs.","definition_xrefs":["GOC:krc","PMID:10690410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000479"},{"relation_name":"part_of","term_name":"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000463"},{"relation_name":"part_of","term_name":"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0010467","GO:0044085","GO:0042254","GO:0008150"],"is_obsolete":false,"name":"endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","synonyms":[{"name":"endonucleolytic cleavage at A3","type":"narrow"}],"termid":"GO:0000464"}


id: PBO:0034382
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_many_to_many_orthology_relationship_with","termid":"PBO:0034382"}


id: GO:0019045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process required for latent viral replication in a cell.","definition_xrefs":["ISBN:0781702534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral latency","termid":"GO:0019042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"latent virus replication","termid":"GO:0019045"}


id: GO:0045698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of synergid cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of synergid differentiation","termid":"GO:0045697"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"synergid differentiation","termid":"GO:0009563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of synergid differentiation","synonyms":[{"name":"down regulation of synergid differentiation","type":"exact"},{"name":"down-regulation of synergid differentiation","type":"exact"},{"name":"downregulation of synergid differentiation","type":"exact"},{"name":"inhibition of synergid differentiation","type":"narrow"},{"name":"negative regulation of synergid cell differentiation","type":"exact"}],"termid":"GO:0045698"}


id: GO:1904646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a amyloid-beta stimulus.","definition_xrefs":["PMID:23555824","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to amyloid-beta","termid":"GO:1904645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to amyloid-beta","synonyms":[{"name":"cellular response to beta-amyloid","type":"exact"},{"name":"cellular response to beta-amyloids","type":"related"}],"termid":"GO:1904646"}


id: SO:0001717
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A histone modification site on H2B where ubiquitin may be added.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_ubiqitination_site","termid":"SO:0001716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2B_ubiquitination_site","synonyms":[{"name":"H2BUbiq","type":"related"}],"termid":"SO:0001717"}


id: GO:1990726
data:
  {"annotated_genes":["SJAG_03954","SJAG_03070","SJAG_02469","SJAG_01327","SJAG_04880","SJAG_05240","SJAG_03460"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91877,102382,104581,105982,108939,110994,112477],"is_not":false,"summary":null,"term":"GO:1990726"}]},"cv_name":"cellular_component","definition":"A conserved, heteroheptameric, cytoplasmic protein complex composed of Lsm1, Lsm2, Lsm3, Lsm4, Lsm5, Lsm6, Lsm7, and Pat1, or orthologs thereof, that shows a strong binding preference for oligoadenylated RNAs over polyadenylated RNAs. May bind further associated proteins. Facilitates the deadenylation-dependent decapping of mRNA in the P-body thereby regulating mRNA decay and subsequent degradation by the 5' to 3' pathway.","definition_xrefs":["GOC:krc","PMID:24139796","PMID:23620288","GOC:bhm","PMID:27627834","PMID:28768202","PMID:19121818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sm-like protein family complex","termid":"GO:0120114"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01327":null,"SJAG_02469":null,"SJAG_03070":null,"SJAG_03460":null,"SJAG_03954":null,"SJAG_04880":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Lsm1-7-Pat1 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990726","terms_by_termid":{"GO:1990726":null}}


id: PBO:0074074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 48","termid":"PBO:0074074"}


id: PBO:0001309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF726 family protein","termid":"PBO:0001309"}


id: GO:0016131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving brassinosteroids, any of a group of steroid derivatives that occur at very low concentrations in plant tissues and may have hormone-like effects.","definition_xrefs":["ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phytosteroid metabolic process","termid":"GO:0016128"},{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"brassinosteroid metabolic process","synonyms":[{"name":"brassinosteroid metabolism","type":"exact"}],"termid":"GO:0016131"}


id: GO:0150052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynapse assembly, the aggregation, arrangement and bonding together of a set of components to form a postsynapse.","definition_xrefs":["PMID:16672654","PMID:28185854","GOC:aruk","GOC:bc","PMID:16394100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse assembly","termid":"GO:0051963"},{"relation_name":"is_a","term_name":"regulation of postsynapse organization","termid":"GO:0099175"},{"relation_name":"regulates","term_name":"postsynapse assembly","termid":"GO:0099068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of postsynapse assembly","termid":"GO:0150052"}


id: GO:0040015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of growth of an organism to reach its usual body size.","definition_xrefs":["GOC:ems","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organism growth","termid":"GO:0040014"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"multicellular organism growth","termid":"GO:0035264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of multicellular organism growth","synonyms":[{"name":"negative regulation of body growth","type":"exact"},{"name":"negative regulation of body size","type":"exact"}],"termid":"GO:0040015"}


id: PBO:0044349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 34","termid":"PBO:0044349"}


id: PBO:0067768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 68","termid":"PBO:0067768"}


id: GO:0045642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of basophil differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of granulocyte differentiation","termid":"GO:0030854"},{"relation_name":"is_a","term_name":"regulation of basophil differentiation","termid":"GO:0045640"},{"relation_name":"positively_regulates","term_name":"basophil differentiation","termid":"GO:0030221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of basophil differentiation","synonyms":[{"name":"activation of basophil differentiation","type":"narrow"},{"name":"stimulation of basophil differentiation","type":"narrow"},{"name":"up regulation of basophil differentiation","type":"exact"},{"name":"up-regulation of basophil differentiation","type":"exact"},{"name":"upregulation of basophil differentiation","type":"exact"}],"termid":"GO:0045642"}


id: PBO:0046450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epiplakin 1","termid":"PBO:0046450"}


id: FYPO:0005626
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic G2 DNA damage checkpoint is normal (i.e. indistinguishable from wild type) when the cell is exposed to ultraviolet light during S phase of the mitotic cell cycle. The mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the mitotic cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah","PMID:26652183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic G2 DNA damage checkpoint during cellular response to UV","termid":"FYPO:0005299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0000298","FYPO:0001312","FYPO:0000631"],"is_obsolete":false,"name":"normal mitotic G2 DNA damage checkpoint during cellular response to UV during mitotic S phase","synonyms":[{"name":"normal G2 DNA damage checkpoint during cellular response to UV during S phase of mitotic cell cycle","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint activation during cellular response to UV during mitotic S phase","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during cellular response to S phase exposure to UV","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during cellular response to UV during mitotic S phase during vegetative growth","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint during cellular response to ultraviolet light during mitotic S phase","type":"exact"},{"name":"normal mitotic G2 DNA damage checkpoint response after UV irradiation during S phase","type":"exact"}],"termid":"FYPO:0005626"}


id: PATO:0000971
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000971 absolute permeability (obsolete PATO:0000971)","termid":"PATO:0000971"}


id: PBO:0060443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NACC family member 2","termid":"PBO:0060443"}


id: PBO:0070437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rabphilin 3A like (without C2 domains)","termid":"PBO:0070437"}


id: FYPO:0007290
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of UDP-glucose 4-epimerase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal UDP-glucose 4-epimerase activity","termid":"FYPO:0007289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"decreased UDP-glucose 4-epimerase activity","synonyms":[{"name":"reduced UDP-glucose 4-epimerase activity","type":"exact"}],"termid":"FYPO:0007290"}


id: PBO:0048014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM and PDZ domain containing 2B, pseudogene","termid":"PBO:0048014"}


id: PBO:0001330
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cells can become independent of the essential calnexin","termid":"PBO:0001330"}


id: GO:0160160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nicotine catabolic process.","definition_xrefs":["PMID:15838033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"positively_regulates","term_name":"nicotine catabolic process","termid":"GO:0019608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nicotine catabolic process","termid":"GO:0160160"}


id: PR:O13849
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cpy1 gene.","definition_xrefs":["UniProtKB:O13849","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase Y (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.10c","synonyms":[{"name":"CPY (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cpy1","type":"exact"}],"termid":"PR:O13849"}


id: GO:0071286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a magnesium ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to magnesium ion","termid":"GO:0032026"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to magnesium ion","termid":"GO:0071286"}


id: GO:0019962
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type I interferon. Type I interferons include the interferon-alpha, beta, delta, epsilon, zeta, kappa, tau, and omega gene families.","definition_xrefs":["GOC:add","ISBN:0126896631","PMID:15546383","PMID:16681834"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon binding","termid":"GO:0019961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type I interferon binding","synonyms":[{"name":"interferon-alpha binding","type":"narrow"},{"name":"interferon-alpha/beta binding","type":"narrow"},{"name":"interferon-beta binding","type":"narrow"},{"name":"interferon-delta binding","type":"narrow"},{"name":"interferon-epsilon binding","type":"narrow"},{"name":"interferon-kappa binding","type":"narrow"},{"name":"interferon-omega binding","type":"narrow"},{"name":"interferon-tau binding","type":"narrow"},{"name":"interferon-zeta binding","type":"narrow"},{"name":"type I IFN binding","type":"exact"}],"termid":"GO:0019962"}


id: GO:0048727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the posterior cibarial plate over time, from its formation to the mature structure.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior cibarial plate development","termid":"GO:0048727"}


id: PBO:0054039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1375","termid":"PBO:0054039"}


id: FYPO:0002965
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleolus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to nucleolus","synonyms":[{"name":"normal protein localisation to nucleolus","type":"exact"},{"name":"normal protein localization to nucleolus during mitotic cell cycle","type":"related"},{"name":"normal protein localization to nucleolus during vegetative growth","type":"exact"}],"termid":"FYPO:0002965"}


id: PBO:0057220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 378h","termid":"PBO:0057220"}


id: PBO:0016523
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Twin HorseTail","termid":"PBO:0016523"}


id: SOFP:organism
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"The name of the organism","definition_xrefs":["so:sjc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organism","termid":"SOFP:organism"}


id: PBO:0049562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B.K variant histone 1","termid":"PBO:0049562"}


id: GO:0002016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the renin-angiotensin system controls the rate of fluid intake and output into the blood.","definition_xrefs":["GOC:tb","ISBN:0721643949","GOC:dph","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by renin-angiotensin","termid":"GO:0003081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of blood volume by renin-angiotensin","synonyms":[{"name":"renin-angiotensin control of body fluid levels","type":"related"},{"name":"renin-angiotensin regulation of blood volume","type":"exact"}],"termid":"GO:0002016"}


id: GO:1905451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Fc-gamma receptor signaling pathway involved in phagocytosis.","definition_xrefs":["PMID:18832707","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"positive regulation of phagocytosis","termid":"GO:0050766"},{"relation_name":"is_a","term_name":"positive regulation of Fc receptor mediated stimulatory signaling pathway","termid":"GO:0060369"},{"relation_name":"is_a","term_name":"regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","termid":"GO:1905449"},{"relation_name":"positively_regulates","term_name":"Fc-gamma receptor signaling pathway involved in phagocytosis","termid":"GO:0038096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"positive regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","synonyms":[{"name":"activation of Fc gamma receptor-dependent phagocytosis","type":"narrow"},{"name":"activation of Fc-gamma receptor signaling pathway involved in phagocytosis","type":"narrow"},{"name":"activation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"narrow"},{"name":"activation of Fcgamma receptor-mediated phagocytosis","type":"narrow"},{"name":"activation of IgG-mediated phagocytosis","type":"narrow"},{"name":"positive regulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"positive regulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"positive regulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"positive regulation of IgG-mediated phagocytosis","type":"exact"},{"name":"up regulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"up regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","type":"exact"},{"name":"up regulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"up regulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"up regulation of IgG-mediated phagocytosis","type":"exact"},{"name":"up-regulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"up-regulation of Fc-gamma receptor signaling pathway involved in phagocytosis","type":"exact"},{"name":"up-regulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"up-regulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"up-regulation of IgG-mediated phagocytosis","type":"exact"},{"name":"upregulation of Fc gamma receptor-dependent phagocytosis","type":"exact"},{"name":"upregulation of Fc-gamma receptor signaling pathway involved in phagocytosis","type":"exact"},{"name":"upregulation of Fc-gamma receptor signalling pathway involved in phagocytosis","type":"exact"},{"name":"upregulation of Fcgamma receptor-mediated phagocytosis","type":"exact"},{"name":"upregulation of IgG-mediated phagocytosis","type":"exact"}],"termid":"GO:1905451"}


id: GO:0042013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-19.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-19 binding","synonyms":[{"name":"IL-19 binding","type":"exact"}],"termid":"GO:0042013"}


id: PBO:0039712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein A4","termid":"PBO:0039712"}


id: GO:0002847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of T cell tolerance induction to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell mediated immune response to tumor cell","termid":"GO:0002841"},{"relation_name":"is_a","term_name":"negative regulation of tolerance induction to tumor cell","termid":"GO:0002844"},{"relation_name":"is_a","term_name":"regulation of T cell tolerance induction to tumor cell","termid":"GO:0002846"},{"relation_name":"is_a","term_name":"negative regulation of peripheral T cell tolerance induction","termid":"GO:0002850"},{"relation_name":"negatively_regulates","term_name":"T cell tolerance induction to tumor cell","termid":"GO:0002411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell tolerance induction to tumor cell","synonyms":[{"name":"down regulation of T cell tolerance induction to tumor cell","type":"exact"},{"name":"down-regulation of T cell tolerance induction to tumor cell","type":"exact"},{"name":"downregulation of T cell tolerance induction to tumor cell","type":"exact"},{"name":"inhibition of T cell tolerance induction to tumor cell","type":"narrow"}],"termid":"GO:0002847"}


id: PBO:0064998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 5","termid":"PBO:0064998"}


id: PBO:0046902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 25 member A","termid":"PBO:0046902"}


id: PBO:0067374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 475, pseudogene","termid":"PBO:0067374"}


id: PBO:0061972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AK member 2","termid":"PBO:0061972"}


id: GO:1905605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases blood-brain barrier permeability, the quality of the blood-brain barrier that allows for a controlled passage of substances (e.g. macromolecules, small molecules, ions) into and out of the brain.","definition_xrefs":["GOC:als","PMID:22524708","GOC:bc","GOC:aruk","GOC:TermGenie","PMID:30280653","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vascular permeability","termid":"GO:0043117"},{"relation_name":"is_a","term_name":"regulation of blood-brain barrier permeability","termid":"GO:1905603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood-brain barrier permeability","synonyms":[{"name":"activation of maintenance of permeability of BBB","type":"narrow"},{"name":"activation of maintenance of permeability of blood-brain barrier","type":"narrow"},{"name":"positive regulation of BBB permeability","type":"exact"},{"name":"positive regulation of blood/brain barrier permeability","type":"exact"},{"name":"up-regulation of BBB permeability","type":"exact"},{"name":"up-regulation of blood-brain barrier permeability","type":"exact"},{"name":"up-regulation of blood/brain barrier permeability","type":"exact"},{"name":"upregulation of BBB permeability","type":"exact"},{"name":"upregulation of blood-brain barrier permeability","type":"exact"},{"name":"upregulation of blood/brain barrier permeability","type":"exact"}],"termid":"GO:1905605"}


id: PATO:0001383
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A polyploidy quality inhering in a bearer by virtue of the bearer's containing five homologous sets of chromosomes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Pentaploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyploid","termid":"PATO:0001377"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentaploid","termid":"PATO:0001383"}


id: GO:0008576
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate. The hydrolysis of ATP by an AAA-ATPase, involved in the heterotypic fusion of membrane vesicles with target membranes and the homotypic fusion of various membrane compartments.","definition_xrefs":["EC:3.6.4.6"],"gene_count":0,"genotype_count":0,"name":"obsolete vesicle-fusing ATPase activity (obsolete GO:0008576)","synonyms":[{"name":"vesicle-fusing ATPase activity","type":"exact"}],"termid":"GO:0008576"}


id: PBO:0080128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle associated membrane protein 7","termid":"PBO:0080128"}


id: CHEBI:15361
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A 2-oxo monocarboxylic acid anion that is the conjugate base of pyruvic acid, arising from deprotonation of the carboxy group.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate","termid":"CHEBI:15361"}


id: PBO:0045548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 3","termid":"PBO:0045548"}


id: PBO:0080639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 87","termid":"PBO:0080639"}


id: GO:0046050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of UMP, uridine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate catabolic process","termid":"GO:0009175"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"UMP metabolic process","termid":"GO:0046049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"UMP catabolic process","synonyms":[{"name":"UMP breakdown","type":"exact"},{"name":"UMP catabolism","type":"exact"},{"name":"UMP degradation","type":"exact"}],"termid":"GO:0046050"}


id: PBO:0047501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXF1 adjacent non-coding developmental regulatory RNA","termid":"PBO:0047501"}


id: PBO:0026800
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_proteasome_core_complex_binding","termid":"PBO:0026800"}


id: GO:0055125
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that forms part of the nuclear pore complex, and is required for its correct assembly. In Saccharomyces cerevisiae Nic96 contains Nsp1p, Nup57p, Nup49p, and Nic96p.","definition_xrefs":["GOC:jh","PMID:12791264","PMID:15741174"],"gene_count":0,"genotype_count":0,"name":"obsolete Nic96 complex (obsolete GO:0055125)","synonyms":[{"name":"Nic96 complex","type":"exact"}],"termid":"GO:0055125"}


id: GO:0043782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cobalt-precorrin 3 + S-adenosyl-L-methionine = cobalt-precorrin 4 + S-adenosyl-L-homocysteine.","definition_xrefs":["MetaCyc:RXN-8761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"cobalt-precorrin-3 C17-methyltransferase activity","secondary_identifiers":["RHEA:26273"],"synonyms":[{"name":"cobalt-precorrin 3 C17-methyltransferase activity","type":"exact"},{"name":"cobalt-precorrin-3 methylase","type":"broad"},{"name":"cobalt-precorrin-3 methyltransferase","type":"broad"},{"name":"cobalt-precorrin-3B C17-methyltransferase activity","type":"exact"}],"termid":"GO:0043782"}


id: PBO:0073548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 and multiple ankyrin repeat domains 2","termid":"PBO:0073548"}


id: PBO:0061859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin like 3","termid":"PBO:0061859"}


id: PBO:0015657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc42 RhoGEF Gef1","termid":"PBO:0015657"}


id: PBO:0060641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor coactivator 4","termid":"PBO:0060641"}


id: PBO:0050352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 55","termid":"PBO:0050352"}


id: GO:0048870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:isa_complete","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell motility","synonyms":[{"name":"cell locomotion","type":"exact"},{"name":"cell movement","type":"related"},{"name":"movement of a cell","type":"exact"}],"termid":"GO:0048870"}


id: GO:0004068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-aspartate = beta-alanine + CO2.","definition_xrefs":["EC:4.1.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"aspartate 1-decarboxylase activity","secondary_identifiers":["MetaCyc:PWY-5155","RHEA:19497","MetaCyc:ASPDECARBOX-RXN"],"synonyms":[{"name":"L-aspartate 1-carboxy-lyase (beta-alanine-forming)","type":"related"},{"name":"L-aspartate 1-carboxy-lyase activity","type":"related"},{"name":"L-aspartate alpha-decarboxylase activity","type":"related"},{"name":"aspartate alpha-decarboxylase activity","type":"related"},{"name":"aspartic alpha-decarboxylase","type":"broad"}],"termid":"GO:0004068"}


id: PBO:0054479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1879","termid":"PBO:0054479"}


id: PBO:0110156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT III complex subunit, nuclear envelope specific subunit Cmp7","termid":"PBO:0110156"}


id: GO:0060849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of a venous endothelial cell to a lymphatic endothelial cell.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in lymphatic endothelial cell fate commitment (obsolete GO:0060849)","termid":"GO:0060849"}


id: PBO:0088346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPX/EXS domain protein Spx2","termid":"PBO:0088346"}


id: PBO:0055916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A4, pseudogene","termid":"PBO:0055916"}


id: PBO:0075421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated antigen 7","termid":"PBO:0075421"}


id: FYPO:0006106
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) at the central core of the centromeric regions does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished chromatin binding","termid":"FYPO:0001093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000702"],"is_obsolete":false,"name":"abolished chromatin binding at centromere central core","synonyms":[{"name":"chromatin binding at centromere central core abolished","type":"exact"}],"termid":"FYPO:0006106"}


id: GO:0044843
data:
  {"annotated_genes":["SJAG_00991","SJAG_00100","SJAG_01311","SJAG_02810","SJAG_03699","SJAG_03160","SJAG_04140","SJAG_01210","SJAG_00996","SJAG_00071","SJAG_02723","SJAG_03591","SJAG_01401","SJAG_05346","SJAG_03681","SJAG_01825","SJAG_00169","SJAG_02026","SJAG_01187","SJAG_02404","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101854,102012],"is_not":false,"summary":null,"term":"GO:0044843"},{"annotations":[104408,111549,98419,108093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000082"},{"annotations":[85007,111972,104940,97678,98422],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0031568"},{"annotations":[87358,105723],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0031571"},{"annotations":[94933,104941,88204,87787,89379,85008],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2000134"},{"annotations":[102014,101859,98437,102701,113148,105235,97680],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1900087"},{"annotations":[113150,87791,102015],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000045"},{"annotations":[102017,111974,111410,97682,104946,107264,87793],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0007089"}]},"cv_name":"biological_process","definition":"The cell cycle process by which a cell in G1 phase commits to S phase.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase transition","termid":"GO:0044770"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00100":null,"SJAG_00169":null,"SJAG_00991":null,"SJAG_00996":null,"SJAG_01187":null,"SJAG_01210":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_01825":null,"SJAG_02026":null,"SJAG_02404":null,"SJAG_02723":null,"SJAG_02810":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03591":null,"SJAG_03681":null,"SJAG_03699":null,"SJAG_04140":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"cell cycle G1/S phase transition","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0044843","terms_by_termid":{"GO:0000082":null,"GO:0007089":null,"GO:0031568":null,"GO:0031571":null,"GO:0044843":null,"GO:1900087":null,"GO:2000045":null,"GO:2000134":null}}


id: PR:Q9UT66
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC4F11.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT66"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4F11.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4F11.05","synonyms":[{"name":"Spom972h-SPCC4F11.05","type":"exact"}],"termid":"PR:Q9UT66"}


id: PBO:0003977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR5","termid":"PBO:0003977"}


id: PBO:0070694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L8 pseudogene 3","termid":"PBO:0070694"}


id: PBO:0038723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 18","termid":"PBO:0038723"}


id: PBO:0065450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase, 6 pseudogene 1","termid":"PBO:0065450"}


id: GO:0030233
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes transport of all four deoxy (d) NDPs, and, less efficiently, the corresponding dNTPs, in exchange for dNDPs, ADP, or ATP.","definition_xrefs":["PMID:11226231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide transmembrane transporter activity","termid":"GO:0015215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"deoxynucleotide transmembrane transporter activity","termid":"GO:0030233"}


id: PBO:0003593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4 h4.2","termid":"PBO:0003593"}


id: PBO:0050653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 90 alpha family class B member 3, pseudogene","termid":"PBO:0050653"}


id: FYPO:0006193
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the mating projection is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"},{"relation_name":"output_of","term_name":"normal shmoo formation","termid":"FYPO:0000573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal shmoo morphology","synonyms":[{"name":"normal conjugation tube morphology","type":"exact"},{"name":"normal mating projection morphology","type":"exact"}],"termid":"FYPO:0006193"}


id: PBO:0039535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 36","termid":"PBO:0039535"}


id: GO:0004130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 ferrocytochrome c + hydrogen peroxide = 2 ferricytochrome c + 2 H2O.","definition_xrefs":["EC:1.11.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"cytochrome-c peroxidase activity","secondary_identifiers":["RHEA:16581","MetaCyc:CYTOCHROME-C-PEROXIDASE-RXN"],"synonyms":[{"name":"apocytochrome c peroxidase activity","type":"related"},{"name":"cytochrome c peroxidase activity","type":"related"},{"name":"cytochrome c-551 peroxidase activity","type":"related"},{"name":"cytochrome c-H2O oxidoreductase activity","type":"related"},{"name":"cytochrome peroxidase activity","type":"related"},{"name":"ferrocytochrome-c:hydrogen-peroxide oxidoreductase activity","type":"related"},{"name":"mesocytochrome c peroxidase azide","type":"related"},{"name":"mesocytochrome c peroxidase cyanate","type":"related"},{"name":"mesocytochrome c peroxidase cyanide","type":"related"}],"termid":"GO:0004130"}


id: GO:0071659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of IP-10.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chemokine production","termid":"GO:0032682"},{"relation_name":"is_a","term_name":"regulation of IP-10 production","termid":"GO:0071658"},{"relation_name":"negatively_regulates","term_name":"IP-10 production","termid":"GO:0071612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of IP-10 production","synonyms":[{"name":"negative regulation of CXCL10 production","type":"exact"},{"name":"negative regulation of chemokine (C-C motif) ligand 10 production","type":"exact"}],"termid":"GO:0071659"}


id: GO:1900731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of adenylate cyclase-inhibiting opioid receptor signaling pathway.","definition_xrefs":["PMID:17157995","GOC:TermGenie","GOC:sjw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of adenylate cyclase-inhibiting opioid receptor signaling pathway","termid":"GO:1900729"},{"relation_name":"is_a","term_name":"positive regulation of opioid receptor signaling pathway","termid":"GO:2000476"},{"relation_name":"positively_regulates","term_name":"adenylate cyclase-inhibiting opioid receptor signaling pathway","termid":"GO:0031635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of adenylate cyclase-inhibiting opioid receptor signaling pathway","synonyms":[{"name":"activation of adenylate cyclase-inhibiting opioid receptor signaling pathway","type":"narrow"},{"name":"activation of opioid receptor-mediated adenylate cyclase inhibition","type":"related"},{"name":"up regulation of adenylate cyclase-inhibiting opioid receptor signaling pathway","type":"exact"},{"name":"upregulation of adenylate cyclase-inhibiting opioid receptor signaling pathway","type":"exact"}],"termid":"GO:1900731"}


id: PBO:0049226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor kinase 7","termid":"PBO:0049226"}


id: FYPO:0006953
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-asparagine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular asparagine level","synonyms":[{"name":"increased asparagine accumulation","type":"related"},{"name":"increased cellular L-asparagine level","type":"exact"},{"name":"increased cellular asparagine level during mitotic cell cycle","type":"related"},{"name":"increased cellular asparagine level during vegetative growth","type":"exact"}],"termid":"FYPO:0006953"}


id: FYPO:0006273
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the structure of the glycan moiety of a nascent glycoprotein in the endoplasmic reticulum lumen differs from wild type.","definition_xrefs":["PomBase:mah","PMID:27587357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glycoprotein glycan structure","termid":"FYPO:0003290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0003290"},{"rel_name":"output_of","termid":"FYPO:0002494"},{"rel_name":"output_of","termid":"FYPO:0002274"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0005447","FYPO:0002494","FYPO:0003290"],"is_obsolete":false,"name":"abnormal glycoprotein glycan structure in endoplasmic reticulum lumen","synonyms":[{"name":"abnormal glycoprotein glycan structure in ER lumen","type":"exact"},{"name":"abnormal glycoprotein oligosaccharide structure in endoplasmic reticulum lumen","type":"related"}],"termid":"FYPO:0006273"}


id: GO:0072062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the S1 cells of the kidney as it progresses from its formation to the mature state.","definition_xrefs":["GOC:bf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"part_of","term_name":"proximal convoluted tubule segment 1 development","termid":"GO:0072031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal convoluted tubule segment 1 cell differentiation","synonyms":[{"name":"S1 cell differentiation","type":"exact"}],"termid":"GO:0072062"}


id: GO:0042039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of vanadium a metallo-sulfur cluster such as VFe(7-8)S(n).","definition_xrefs":["PMID:11053414"],"gene_count":0,"genotype_count":0,"name":"obsolete vanadium incorporation into metallo-sulfur cluster (obsolete GO:0042039)","synonyms":[{"name":"vanadium incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0042039"}


id: GO:0030464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:sgd_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete aging dependent sterility (sensu Fungi) (obsolete GO:0030464)","synonyms":[{"name":"aging dependent sterility (sensu Fungi)","type":"exact"}],"termid":"GO:0030464"}


id: PBO:0065933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac family small GTPase 1 pseudogene 7","termid":"PBO:0065933"}


id: GO:0009948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the anterior/posterior axis. The anterior-posterior axis is defined by a line that runs from the head or mouth of an organism to the tail or opposite end of the organism.","definition_xrefs":["GOC:tb","GOC:go_curators","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"part_of","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior/posterior axis specification","synonyms":[{"name":"anterior/posterior axis determination","type":"related"}],"termid":"GO:0009948"}


id: PBO:0034561
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_actomyosin_contractile_ring_contraction","termid":"PBO:0034561"}


id: GO:0060062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of the specialized region at the dorsal lip of the blatopore of the embryo that acts as the main signaling center establishing the vertebrate body plan.","definition_xrefs":["GOC:dph","PMID:9442883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Spemann organizer formation","termid":"GO:0060061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Spemann organizer formation at the dorsal lip of the blastopore","synonyms":[{"name":"Spemann's organizer formation at the dorsal lip of the blastopore","type":"exact"},{"name":"Spemann-Mangold organizer formation at the dorsal lip of the blastopore","type":"exact"}],"termid":"GO:0060062"}


id: PBO:0055160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2579","termid":"PBO:0055160"}


id: GO:1990855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of myo-inositol from outside of a cell into the intracellular region of a cell across the plasma membrane.","definition_xrefs":["PMID:9560432"],"gene_count":0,"genotype_count":0,"name":"obsolete myo-inositol import across plasma membrane (obsolete GO:1990855)","termid":"GO:1990855"}


id: PBO:0073344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 6","termid":"PBO:0073344"}


id: PR:Q9HGP1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC29B5.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGP1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29B5.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29B5.04c","synonyms":[{"name":"Spom972h-SPBC29B5.04c","type":"exact"}],"termid":"PR:Q9HGP1"}


id: GO:0008075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate.","definition_xrefs":["EC:4.6.1.2"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor guanylate cyclase activity (obsolete GO:0008075)","synonyms":[{"name":"receptor guanylate cyclase activity","type":"exact"}],"termid":"GO:0008075"}


id: GO:0044862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein out of a plasma membrane raft.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport out of membrane raft","termid":"GO:0032599"},{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"},{"relation_name":"is_a","term_name":"protein transport within plasma membrane","termid":"GO:0099632"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0061024","GO:0051179"],"is_obsolete":false,"name":"protein transport out of plasma membrane raft","termid":"GO:0044862"}


id: GO:0010496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of substances between cells.","definition_xrefs":["GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"},{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"intercellular transport","secondary_identifiers":["GO:1902585"],"synonyms":[{"name":"single organism intercellular transport","type":"related"},{"name":"single-organism intercellular transport","type":"related"}],"termid":"GO:0010496"}


id: FYPO:0005233
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to an MCM complex is normal (i.e. indistinguishable from wild type). The protein whose binding to the MCM complex is assayed may be encoded by the mutated gene, or may be encoded by a different gene.","definition_xrefs":["PMID:12604790","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex binding","termid":"FYPO:0005232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal MCM complex binding","termid":"FYPO:0005233"}


id: GO:0052211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with a second organism mediated by a substance secreted by the first organism by a type II secretion system, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with other organism via protein secreted by type II secretion system involved in symbiotic interaction (obsolete GO:0052211)","synonyms":[{"name":"interaction with other organism via protein secreted by type II secretion system during symbiotic interaction","type":"related"}],"termid":"GO:0052211"}


id: PBO:0048947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOT1 divergent transcript","termid":"PBO:0048947"}


id: GO:0036015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-3 stimulus.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-3","synonyms":[{"name":"response to IL-3","type":"exact"}],"termid":"GO:0036015"}


id: PBO:0067395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 500, pseudogene","termid":"PBO:0067395"}


id: GO:0150064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Early postnatal vertebrate developmental process, during which axons of retinal ganglion cells (RGCs), transmitting overlapping inputs from both eyes, segregate into distinct eye-specific non-overlapping regions in the dorsal lateral geniculate nucleus (dLGN) of the thalamus.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:16025107","PMID:29322522","PMID:22632727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"},{"relation_name":"part_of","term_name":"visual system development","termid":"GO:0150063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vertebrate eye-specific patterning","synonyms":[{"name":"binocular vision development","type":"related"},{"name":"eye-specific patterning","type":"broad"},{"name":"eye-specific segregation","type":"broad"},{"name":"vertebrate eye-specific segregation","type":"exact"}],"termid":"GO:0150064"}


id: PATO:0002431
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality in which the bearer possesses a gradual, yet distinct, thinning from a wide starting point.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"waisted","termid":"PATO:0002431"}


id: GO:0034589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of hydroxyproline into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah","PMID:14502423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"carboxylic acid transport","termid":"GO:0046942"},{"relation_name":"is_a","term_name":"modified amino acid transport","termid":"GO:0072337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"hydroxyproline transport","synonyms":[{"name":"4-hydroxyproline transport","type":"exact"},{"name":"L-hydroxyproline transport","type":"narrow"}],"termid":"GO:0034589"}


id: PBO:0063762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHC2 antisense RNA 1","termid":"PBO:0063762"}


id: PBO:0113207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial fission factor (mitofissin) essential for mitophagy; required for Dmn1p-mediated mitochondrial fission; directly binds to lipid membranes and brings about lipid membrane fragility to facilitate membrane fission; S. pombe homolog complements null mutant","termid":"PBO:0113207"}


id: PBO:0013461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyl protein thioesterase/ dolichol pyrophosphate phosphatase fusion protein Pdf1","termid":"PBO:0013461"}


id: PBO:0000258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin Cdc12","termid":"PBO:0000258"}


id: FYPO:0006072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the addition of one or more uridylyl residues to the 3' end of a small RNA (sRNA) molecule does not occur.","definition_xrefs":["PMID:28541282","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0000294","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished small RNA 3' uridylation","synonyms":[{"name":"abolished sRNA 3' uridylation","type":"exact"},{"name":"abolished small RNA 3' uridylation during mitotic cell cycle","type":"related"},{"name":"abolished small RNA 3' uridylation during vegetative growth","type":"exact"},{"name":"abolished small regulatory RNA 3' uridylation","type":"exact"},{"name":"small RNA 3' uridylation abolished","type":"exact"}],"termid":"FYPO:0006072"}


id: PBO:0003261
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of Wis1-Sty1 MAPKK-MAPK signaling pathway","termid":"PBO:0003261"}


id: GO:0004040
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a monocarboxylic acid amide + H2O = a monocarboxylate + NH3.","definition_xrefs":["EC:3.5.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"amidase activity","secondary_identifiers":["UM-BBD_reactionID:r0084","MetaCyc:AMIDASE-RXN","RHEA:12020","UM-BBD_reactionID:r1440","UM-BBD_reactionID:r0375"],"synonyms":[{"name":"N-acetylaminohydrolase activity","type":"related"},{"name":"acetamidase activity","type":"exact"},{"name":"acylamidase activity","type":"related"},{"name":"acylamide amidohydrolase activity","type":"related"},{"name":"acylase activity","type":"related"},{"name":"amidohydrolase activity","type":"related"},{"name":"fatty acylamidase activity","type":"related"}],"termid":"GO:0004040"}


id: PBO:0051331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-26 (pseudogene)","termid":"PBO:0051331"}


id: PBO:0003001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide dioxygenase (predicted)","termid":"PBO:0003001"}


id: PBO:0071747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L41 pseudogene 3","termid":"PBO:0071747"}


id: GO:0048882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the lateral line over time, from its formation to the mature structure. The lateral line consists of small sensory patches (neuromasts) located superficially on the skin or just under the skin in fluid-filled canals on the head and body of all fishes and most amphibians. The lateral line develops from cranial ectodermal placodes situated behind the ear and between the eye and ear.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"part_of","term_name":"lateral line system development","termid":"GO:0048925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral line development","synonyms":[{"name":"LL development","type":"exact"}],"termid":"GO:0048882"}


id: PBO:0085158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleotide exchange factor for Gsp1p; localizes to the nucleus, required for nucleocytoplasmic trafficking of macromolecules; suppressor of the pheromone response pathway; potentially phosphorylated by Cdc28p; human homolog of the RAN GEF, RCC1, can complement a temperature sensitive point mutant","termid":"PBO:0085158"}


id: PBO:0027784
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_threonine_phosphorylation","termid":"PBO:0027784"}


id: PBO:0054837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2251","termid":"PBO:0054837"}


id: GO:0106283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + ursodeoxycholate = 7-oxolithocholate + H+ + NADH.","definition_xrefs":["RHEA:42028","PMID:12917011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"ursodeoxycholate 7-beta-dehydrogenase (NAD+) activity","termid":"GO:0106283"}


id: GO:0030258
data:
  {"annotated_genes":["SJAG_04792","SJAG_00706","SJAG_02788","SJAG_00413"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100042],"is_not":false,"summary":null,"term":"GO:0030258"},{"annotations":[107895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[72181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006635"},{"annotations":[88248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019395"}]},"cv_name":"biological_process","definition":"The covalent alteration of one or more fatty acids in a lipid, resulting in a change in the properties of the lipid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular lipid metabolic process","termid":"GO:0044255"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_00706":null,"SJAG_02788":null,"SJAG_04792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipid modification","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030258","terms_by_termid":{"GO:0001561":null,"GO:0006635":null,"GO:0019395":null,"GO:0030258":null}}


id: GO:0050027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-idonate + NADP+ = 5-dehydro-D-gluconate + NADPH.","definition_xrefs":["MetaCyc:L-IDONATE-2-DEHYDROGENASE-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete L-idonate 2-dehydrogenase activity (obsolete GO:0050027)","secondary_identifiers":["EC:1.1.1.128"],"synonyms":[{"name":"5-keto-D-gluconate 2-reductase activity","type":"related"},{"name":"5-ketogluconate 2-reductase activity","type":"related"},{"name":"5-ketoglucono-idono-reductase activity","type":"related"},{"name":"5KGR","type":"related"},{"name":"L-idonate 2-dehydrogenase activity","type":"exact"},{"name":"L-idonate dehydrogenase activity","type":"related"},{"name":"L-idonate:NADP+ 2-oxidoreductase activity","type":"related"},{"name":"reductase, 5-ketogluconate 5- (L-idonate-forming)","type":"related"}],"termid":"GO:0050027"}


id: PBO:0002618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylosuccinate synthetase Ade2","termid":"PBO:0002618"}


id: PR:O13942
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23H3.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23H3.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.12c","synonyms":[{"name":"Spom972h-SPAC23H3.12c","type":"exact"}],"termid":"PR:O13942"}


id: PBO:0069342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 602, pseudogene","termid":"PBO:0069342"}


id: PBO:0085110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear type II J heat shock protein of the E. coli dnaJ family; overexpression stabilizes amino acid permeases; contains a leucine zipper-like motif, binds to non-native substrates for presentation to Ssa3p, may function during protein translocation, assembly and disassembly; localizes to the cytosol and plasma membrane, while a GFP fusion protein localizes to the nucleus","termid":"PBO:0085110"}


id: PBO:0045159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 17","termid":"PBO:0045159"}


id: GO:0008559
data:
  {"annotated_genes":["SJAG_03363","SJAG_05213"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92133,114023],"is_not":false,"summary":null,"term":"GO:0008559"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + xenobiotic(in) = ADP + phosphate + xenobiotic(out).","definition_xrefs":["EC:7.6.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic transmembrane transporter activity","termid":"GO:0042910"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03363":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type xenobiotic transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0008560","MetaCyc:3.6.3.44-RXN","GO:0005226","Reactome:R-HSA-9757139"],"synonyms":[{"name":"ATP phosphohydrolase (xenobiotic-exporting)","type":"related"},{"name":"ATP-dependent xenobiotic transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled xenobiotic transmembrane transporter activity","type":"related"},{"name":"MDR protein","type":"related"},{"name":"P-glycoprotein","type":"related"},{"name":"PDR protein","type":"related"},{"name":"multidrug resistance exporter","type":"related"},{"name":"multidrug-resistance protein","type":"related"},{"name":"pleiotropic-drug-resistance protein","type":"related"},{"name":"xenobiotic ABC transporter","type":"narrow"},{"name":"xenobiotic transmembrane transporting ATPase activity","type":"exact"}],"termid":"GO:0008559","terms_by_termid":{"GO:0008559":null}}


id: GO:0050513
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}-L-asparagine + UDP-alpha-D-xylose = N(4)-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-[beta-D-xylosyl-(1->2)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}-L-asparagine + H+ + UDP.","definition_xrefs":["RHEA:10612","EC:2.4.2.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"glycoprotein 2-beta-D-xylosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.2.38-RXN","KEGG_REACTION:R06016"],"synonyms":[{"name":"1,2-beta-xylosyltransferase activity","type":"related"},{"name":"beta-1,2-xylosyltransferase activity","type":"related"},{"name":"glycoprotein 2-b-D-xylosyltransferase activity","type":"exact"}],"termid":"GO:0050513"}


id: GO:0070302
data:
  {"annotated_genes":["SJAG_05000","SJAG_04666","SJAG_00424","SJAG_04825","SJAG_04522","SJAG_00610","SJAG_03263","SJAG_02392","SJAG_01114","SJAG_01787"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114380,91911,99870,103096,103666,95500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[86826,85502,88464,98909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903139"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signaling via a stress-activated protein kinase signaling cascade.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"stress-activated protein kinase signaling cascade","termid":"GO:0031098"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01114":null,"SJAG_01787":null,"SJAG_02392":null,"SJAG_03263":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of stress-activated protein kinase signaling cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of SAPK signaling pathway","type":"exact"},{"name":"regulation of stress-activated protein kinase signaling pathway","type":"exact"},{"name":"regulation of stress-activated protein kinase signalling pathway","type":"exact"}],"termid":"GO:0070302","terms_by_termid":{"GO:1903138":null,"GO:1903139":null}}


id: PATO:0001396
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A monadic quality of continuant that exists at the cellular level of organisation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular quality","termid":"PATO:0001396"}


id: PBO:0076227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT16 homolog, facilitates chromatin remodeling subunit","termid":"PBO:0076227"}


id: PBO:0067163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 216, pseudogene","termid":"PBO:0067163"}


id: GO:2000834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of androgen secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid hormone secretion","termid":"GO:2000831"},{"relation_name":"regulates","term_name":"androgen secretion","termid":"GO:0035935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of androgen secretion","termid":"GO:2000834"}


id: PBO:0018067
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Threonine DeAminase","termid":"PBO:0018067"}


id: PR:O74851
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- adg3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted beta-glucosidase adg3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.01c","synonyms":[{"name":"Spom972h-adg3","type":"exact"}],"termid":"PR:O74851"}


id: PR:000050514
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the alp7 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule protein alp7 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC890.02c","synonyms":[{"name":"SPAC890.02c","type":"related"},{"name":"Spom-alp7","type":"exact"},{"name":"TACC protein mia1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"alp7","type":"related"},{"name":"altered polarity protein 7 (Schizosaccharomyces pombe)","type":"exact"},{"name":"mia1","type":"related"},{"name":"transforming acidic coiled-coil protein mia1 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050514"}


id: PBO:0058553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6132","termid":"PBO:0058553"}


id: GO:0100059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates phenotypic switching.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phenotypic switching by transcription from RNA polymerase II promoter (obsolete GO:0100059)","termid":"GO:0100059"}


id: FYPO:0006363
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the spindle forms with microtubules emanating from only one pole during the first meiotic nuclear division.","definition_xrefs":["PMID:24954111","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle morphology during meiosis I","termid":"FYPO:0005652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002399","FYPO:0000054","FYPO:0000120"],"is_obsolete":false,"name":"monopolar spindle during meiosis I","synonyms":[{"name":"V-shaped spindle during meiosis I","type":"related"},{"name":"fan-shaped spindle during meiosis I","type":"exact"},{"name":"monopolar spindle during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006363"}


id: PBO:0113389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by SAGE; overlaps tRNA-Pro/YNCO0011W","termid":"PBO:0113389"}


id: PBO:0050371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 74","termid":"PBO:0050371"}


id: PBO:0072575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleotide reductase M2 polypeptide pseudogene 3","termid":"PBO:0072575"}


id: FYPO:0008197
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which autophagic degradation of the endoplasmic reticulum occurs to a lower extent than normal.","definition_xrefs":["PMID:37553386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal reticulophagy during vegetative growth","termid":"FYPO:0007445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased reticulophagy during vegetative growth","termid":"FYPO:0008197"}


id: PR:Q9Y801
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug57 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAS1 domain-containing protein mug57 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC146.10","synonyms":[{"name":"Spom972h-mug57","type":"exact"},{"name":"meiotically up-regulated gene 57 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y801"}


id: PR:O13932
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A BET1 homolog that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein bet1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.13","secondary_identifiers":["UniProtKB:O13932"],"synonyms":[{"name":"Spom972h-BET1","type":"exact"}],"termid":"PR:O13932"}


id: PBO:0081055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 12","termid":"PBO:0081055"}


id: PR:Q9HE12
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A solute carrier family 23 member 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine permease C1399.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1399.01c","secondary_identifiers":["UniProtKB:Q9HE12"],"synonyms":[{"name":"Spom972h-SLC23A2","type":"exact"}],"termid":"PR:Q9HE12"}


id: GO:0098684
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribbon synapse between a retinal photoreceptor cell (rod or cone) and a retinal bipolar cell. These contain a plate-like synaptic ribbon.","definition_xrefs":["PMID:15626493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribbon synapse","termid":"GO:0097470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"photoreceptor ribbon synapse","termid":"GO:0098684"}


id: FYPO:0000628
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process","references_by_uniquename":{"PMID:21802294":null,"PMID:22300943":null,"PMID:23786411":null,"PMID:24184107":null,"PMID:24699070":null,"PMID:25318672":null,"PMID:25866389":null,"PMID:26774782":null,"PMID:27059155":null,"PMID:28954740":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:31150379":null,"PMID:32109380":null,"PMID:32243490":null,"PMID:32915139":null,"PMID:33495454":null,"PMID:33791858":null,"PMID:34198697":null,"PMID:35226668":null,"PMID:36058798":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_03689","SJAG_02592","SJAG_03143","SJAG_03351","SJAG_04332","SJAG_03575","SJAG_02252","SJAG_03892","SJAG_04522","SJAG_00514","SJAG_01374","SJAG_02763","SJAG_03250","SJAG_00426","SJAG_00118","SJAG_01745","SJAG_03444","SJAG_04349","SJAG_03783","SJAG_01242","SJAG_04280","SJAG_04697","SJAG_02392","SJAG_00409","SJAG_04551","SJAG_00266","SJAG_01050","SJAG_03940","SJAG_03891","SJAG_04912","SJAG_01143","SJAG_03449","SJAG_04489","SJAG_01956","SJAG_01834","SJAG_01330","SJAG_04464","SJAG_03596","SJAG_04284","SJAG_05207","SJAG_00610","SJAG_04703","SJAG_01906","SJAG_01787","SJAG_02796"],"single_locus_genotype_uniquenames":["pck2delta","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","pom152delta","sty1delta","mid2delta","for3delta","agn1delta","vps24delta","mid1delta","nup132delta","vps25delta","rga4delta","sst4delta","gpd1delta","atf1delta","mad2delta","dcr1delta","nem1delta","nur1delta","pck1delta","alx1delta","ace2delta","pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","vps32delta","gms1delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1delta","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nem2delta","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","cmp7delta","man1delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1-5A-S499A__S538A__T620A__T638A__S651A-amino_acid_mutation-expression-not_assayed_or_wild_type","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","sep1delta","lem2delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","vps28delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","vps4delta","pom1delta","vps4-ts-I307T_L327S-amino_acid_mutation-expression-not_assayed_or_wild_type","did4delta","scd1delta","nup61delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"termid":"FYPO:0000628","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000207":null,"FYECO:0000248":null,"FYECO:0000314":null,"FYECO:0000338":null,"FYPO:0000026":null,"FYPO:0000118":null,"FYPO:0000198":null,"FYPO:0000231":null,"FYPO:0000324":null,"FYPO:0000356":null,"FYPO:0000595":null,"FYPO:0000618":null,"FYPO:0000619":null,"FYPO:0000671":null,"FYPO:0000729":null,"FYPO:0000731":null,"FYPO:0000815":null,"FYPO:0001038":null,"FYPO:0001132":null,"FYPO:0001327":null,"FYPO:0001369":null,"FYPO:0001370":null,"FYPO:0001375":null,"FYPO:0001440":null,"FYPO:0001556":null,"FYPO:0001784":null,"FYPO:0001838":null,"FYPO:0001971":null,"FYPO:0002026":null,"FYPO:0002033":null,"FYPO:0002678":null,"FYPO:0002680":null,"FYPO:0002870":null,"FYPO:0002998":null,"FYPO:0003315":null,"FYPO:0003657":null,"FYPO:0003727":null,"FYPO:0003738":null,"FYPO:0003779":null,"FYPO:0003946":null,"FYPO:0003973":null,"FYPO:0003976":null,"FYPO:0004105":null,"FYPO:0004205":null,"FYPO:0004318":null,"FYPO:0004573":null,"FYPO:0004718":null,"FYPO:0004890":null,"FYPO:0004982":null,"FYPO:0005503":null,"FYPO:0005957":null,"FYPO:0006054":null,"FYPO:0006433":null,"FYPO:0006557":null,"FYPO:0006945":null,"FYPO:0007073":null,"FYPO:0007177":null,"FYPO:0007363":null,"FYPO:0007701":null,"FYPO:0007770":null,"FYPO:0007771":null,"FYPO:0007772":null,"FYPO:0007783":null,"FYPO:0007824":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null,"GO:0000815":null}}


id: FYPO:0006989
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115631,115632],"is_not":false,"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[115624],"is_not":false,"summary":null,"term":"FYPO:0006989"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 is normal (i.e. indistinguishable from wild type) at transposable elements.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03118","SJAG_03689","SJAG_02621"],"name":"normal histone H3-K9 dimethylation at transposable element during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"normal histone H3 K9 dimethylation at transposable element during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 dimethylation at transposable element during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 dimethylation at transposon during vegetative growth","type":"exact"},{"name":"normal histone H3K9 dimethylation at transposable element during vegetative growth","type":"exact"},{"name":"normal histone H3K9me2 at transposable element during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 dimethylation at transposable element during vegetative growth","type":"exact"}],"termid":"FYPO:0006989","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0006989":null}}


id: PBO:0043505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin associated protein family member 3C","termid":"PBO:0043505"}


id: PBO:0059976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 21","termid":"PBO:0059976"}


id: PBO:0056620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial trans-2-enoyl-CoA reductase","termid":"PBO:0056620"}


id: PBO:0038976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADPGK antisense RNA 1","termid":"PBO:0038976"}


id: GO:0043059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the speed, mechanical force, or rhythm of the anterior movement of an organism.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of locomotion","termid":"GO:0040012"},{"relation_name":"regulates","term_name":"forward locomotion","termid":"GO:0043056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of forward locomotion","termid":"GO:0043059"}


id: SO:0001213
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Group III introns are introns found in the mRNA of the plastids of euglenoid protists. They are spliced by a two step transesterification with bulged adenosine as initiating nucleophile.","definition_xrefs":["PMID:11377794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autocatalytically_spliced_intron","termid":"SO:0000588"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"group_III_intron","secondary_identifiers":["http://en.wikipedia.org/wiki/Group_III_intron"],"synonyms":[{"name":"group III intron","type":"exact"}],"termid":"SO:0001213"}


id: PBO:0030372
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cobalt","termid":"PBO:0030372"}


id: PBO:0041856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 3 pseudogene 1","termid":"PBO:0041856"}


id: PBO:0004324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C3HC4 type (RING finger)/GCN5-related N acetyltransferase fusion protein","termid":"PBO:0004324"}


id: PBO:0055776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"loss of heterozygosity on chromosome 12, region 2","termid":"PBO:0055776"}


id: GO:0061191
data:
  {"annotated_genes":["SJAG_03137","SJAG_02433"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93683,106321],"is_not":false,"summary":null,"term":"GO:0061191"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the fusion of two vacuole membranes to form a single vacuole.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vacuole fusion, non-autophagic","termid":"GO:0032889"},{"relation_name":"is_a","term_name":"positive regulation of vacuole organization","termid":"GO:0044090"},{"relation_name":"positively_regulates","term_name":"vacuole fusion, non-autophagic","termid":"GO:0042144"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02433":null,"SJAG_03137":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vacuole fusion, non-autophagic","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061191","terms_by_termid":{"GO:0061191":null}}


id: GO:0050354
data:
  {"annotated_genes":["SJAG_04320"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89114],"is_not":false,"summary":null,"term":"GO:0050354"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glyceraldehyde + ATP = D-glyceraldehyde 3-phosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.28","RHEA:13941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04320":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"triokinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:TRIOKINASE-RXN","Reactome:R-HSA-70349","KEGG_REACTION:R01059"],"synonyms":[{"name":"ATP:D-glyceraldehyde 3-phosphotransferase activity","type":"related"},{"name":"D-triokinase activity","type":"related"},{"name":"trio triose kinase (phosphorylating)","type":"related"},{"name":"triose kinase activity","type":"related"}],"termid":"GO:0050354","terms_by_termid":{"GO:0050354":null}}


id: PBO:0077376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 117","termid":"PBO:0077376"}


id: PBO:0087761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TORC1; TORC1 is a rapamycin-sensitive complex involved in growth control that contains Tor1p or Tor2p, Lst8p and Tco89p; contains four HEAT repeats and seven WD-40 repeats; may act as a scaffold protein to couple TOR and its effectors","termid":"PBO:0087761"}


id: PBO:0066095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS p21 protein activator 4D, pseudogene","termid":"PBO:0066095"}


id: PBO:0047333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBLIM1 pseudogene 2","termid":"PBO:0047333"}


id: PBO:0065308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 27","termid":"PBO:0065308"}


id: PBO:0082169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AdoMet-dependent methyltransferase; involved in rRNA processing and 60S ribosomal subunit maturation; methylates G2922 in the tRNA docking site of the large subunit rRNA and in the absence of snR52, U2921; suppressor of PAB1 mutants","termid":"PBO:0082169"}


id: GO:0030854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of granulocyte differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of myeloid leukocyte differentiation","termid":"GO:0002763"},{"relation_name":"is_a","term_name":"regulation of granulocyte differentiation","termid":"GO:0030852"},{"relation_name":"positively_regulates","term_name":"granulocyte differentiation","termid":"GO:0030851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of granulocyte differentiation","synonyms":[{"name":"activation of granulocyte differentiation","type":"narrow"},{"name":"stimulation of granulocyte differentiation","type":"narrow"},{"name":"up regulation of granulocyte differentiation","type":"exact"},{"name":"up-regulation of granulocyte differentiation","type":"exact"},{"name":"upregulation of granulocyte differentiation","type":"exact"}],"termid":"GO:0030854"}


id: GO:0002206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The somatic process in which immunoglobulin genes are diversified through the mechanism of gene conversion.","definition_xrefs":["PMID:14991701","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors via gene conversion","termid":"GO:0002565"},{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins","termid":"GO:0016445"},{"relation_name":"is_a","term_name":"gene conversion","termid":"GO:0035822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"gene conversion of immunoglobulin genes","synonyms":[{"name":"gene conversion of antibody genes","type":"exact"}],"termid":"GO:0002206"}


id: PBO:0070804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 34","termid":"PBO:0070804"}


id: GO:0002218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates an innate immune response. Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens. Examples of this process include activation of the hypersensitive response of Arabidopsis thaliana and activation of any NOD or TLR signaling pathway in vertebrate species.","definition_xrefs":["ISBN:0781735149","PMID:16177805","GOC:add","GOC:mtg_sensu","GO_REF:0000022","PMID:15199967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation of immune response","termid":"GO:0002253"},{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of innate immune response","secondary_identifiers":["GO:0002219"],"termid":"GO:0002218"}


id: PBO:0074199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 9","termid":"PBO:0074199"}


id: PR:000025003
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mfm1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:MSY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor precursor mfm1","pombase_gene_id":"SPAPB8E5.05","synonyms":[{"name":"mfm1","type":"exact"}],"termid":"PR:000025003"}


id: PBO:0080551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1L pseudogene 10","termid":"PBO:0080551"}


id: PBO:0066404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REL divergent transcript","termid":"PBO:0066404"}


id: GO:0044777
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homotetrameric protein complex that is essential for DNA replication. It supercoils the single-stranded DNA preventing DNA duplexing before the polymerase holoenzyme passes and synthesizes the complementary strand. It is also involved in DNA recombination and repair.","definition_xrefs":["GOC:jl","UniProt:P0AGE0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"nucleoid","termid":"GO:0009295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"single-stranded DNA-binding protein complex","synonyms":[{"name":"SSB complex","type":"exact"}],"termid":"GO:0044777"}


id: PBO:0002237
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.-","termid":"PBO:0002237"}


id: PBO:0075462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 13","termid":"PBO:0075462"}


id: GO:0033558
data:
  {"annotated_genes":["SJAG_01075","SJAG_04039","SJAG_00581","SJAG_03844","SJAG_03627","SJAG_04186"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105525,110491],"is_not":false,"summary":null,"term":"GO:0033558"},{"annotations":[105518,93287,108173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004407"},{"annotations":[108174,100258,105519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031078"},{"annotations":[100259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990162"},{"annotations":[100260,105520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032129"},{"annotations":[105521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140937"},{"annotations":[105522,93288,100261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034739"},{"annotations":[105523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180033"},{"annotations":[105524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180032"},{"annotations":[86118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032041"},{"annotations":[86119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140765"},{"annotations":[100263,110490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046969"},{"annotations":[100264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046970"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N6-acetyl-L-lysyl-[protein] = acetate + L-lysyl-[protein].","definition_xrefs":["PMID:27296530","RHEA:58108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00581":null,"SJAG_01075":null,"SJAG_03627":null,"SJAG_03844":null,"SJAG_04039":null,"SJAG_04186":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0019213","GO:0140096"],"is_obsolete":false,"name":"protein lysine deacetylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9626962","Reactome:R-HSA-9825772","Reactome:R-HSA-5693092","Reactome:R-HSA-9701565","Reactome:R-HSA-8952069"],"synonyms":[{"name":"protein deacetylase activity","type":"exact"}],"termid":"GO:0033558","terms_by_termid":{"GO:0004407":null,"GO:0031078":null,"GO:0032041":null,"GO:0032129":null,"GO:0033558":null,"GO:0034739":null,"GO:0046969":null,"GO:0046970":null,"GO:0140765":null,"GO:0140937":null,"GO:0180032":null,"GO:0180033":null,"GO:1990162":null}}


id: PR:Q09684
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tht1 gene.","definition_xrefs":["UniProtKB:Q09684","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear fusion protein tht1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13C5.03","synonyms":[{"name":"Spom972h-tht1","type":"exact"},{"name":"Twin horsetail protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09684"}


id: GO:0036396
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A RNA methyltransferase complex that catalyzes the post-transcriptional methylation of adenosine to form N6-methyladenosine (m6A). In budding yeast, the MIS complex consists of Mum2p, Ime4p and Slz1p. In vertebrates, the complex consists of METTL3, METTL14 and associated components WTAP, ZC3H13, VIRMA, CBLL1/HAKAI and in some cases of RBM15 (RBM15 or RBM15B).","definition_xrefs":["PMID:24407421","PMID:29535189","GOC:dgf","PMID:29507755","PMID:24316715","PMID:22685417","PMID:29547716","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RNA N6-methyladenosine methyltransferase complex","synonyms":[{"name":"METTL3-METTL14-WTAP methyltransferase complex","type":"related"},{"name":"MIS complex","type":"related"},{"name":"Mum2, Ime4, and Slz1 complex","type":"exact"},{"name":"WMM complex","type":"exact"},{"name":"m(6)A writer complex","type":"related"},{"name":"m6A methyltransferase complex","type":"related"}],"termid":"GO:0036396"}


id: PBO:0052821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 87, pseudogene","termid":"PBO:0052821"}


id: PBO:0092020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Leucine (uag), mitochondrial","termid":"PBO:0092020"}


id: PBO:0041423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C8orf34 antisense RNA 1","termid":"PBO:0041423"}


id: PBO:0069523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 792, pseudogene","termid":"PBO:0069523"}


id: GO:0060780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the intercalary leaflet attains its shape. An intercalary leaflet is a leaflet that develops between primary leaflets.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leaflet morphogenesis","termid":"GO:0060794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intercalary leaflet morphogenesis","termid":"GO:0060780"}


id: PBO:0043847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase X, M14 family member 2","termid":"PBO:0043847"}


id: GO:0043913
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A trimeric protein complex which in E. coli is composed of the subunits MreB, MreC and MreD. The complex directs longitudinal cell wall synthesis, maintaining cell morphology.","definition_xrefs":["PMID:15612918","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete chromosome segregation-directing complex (obsolete GO:0043913)","synonyms":[{"name":"MreBCD complex","type":"narrow"},{"name":"chromosome segregation directing complex","type":"exact"},{"name":"longitudinal peptidoglycan synthesis-directing complex","type":"exact"}],"termid":"GO:0043913"}


id: GO:0106107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of (R)-mevalonic acid biosynthetic process.","definition_xrefs":["GOC:BHF_miRNA","GOC:rph","PMID:24296663","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"(R)-mevalonic acid biosynthetic process","termid":"GO:1901737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of (R)-mevalonic acid biosynthetic process","termid":"GO:0106107"}


id: PBO:0053565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 578","termid":"PBO:0053565"}


id: PBO:0040000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 13A","termid":"PBO:0040000"}


id: PBO:0076562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3C","termid":"PBO:0076562"}


id: GO:0102850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a (9Z)-octadecenoyl-containing glycerolipid + 2 H+ + O2 + 2 reduced [2Fe-2S]-[ferredoxin] = a (9Z,12Z)-octadecadienoyl-containing glycerolipid + 2 H2O + 2 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["RHEA:46376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"acyl-lipid (n+3)-(Z)-desaturase (ferredoxin) activity","secondary_identifiers":["EC:1.14.19.23"],"synonyms":[{"name":"1-18:1-2-16:0-phosphatidylglycerol omega-6 desaturase activity","type":"exact"}],"termid":"GO:0102850"}


id: PBO:0049246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRPEL2 antisense RNA 1","termid":"PBO:0049246"}


id: SO:0001520
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute of a translocation, which is then a region of nucleotide sequence that has translocated to a new position. The observed adjacency of two previously separated regions.","direct_ancestors":[{"relation_name":"is_a","term_name":"alteration_attribute","termid":"SO:0001508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocaton_attribute","synonyms":[{"name":"translocation attribute","type":"exact"}],"termid":"SO:0001520"}


id: FYPO:0009092
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing lysine and serine as nitrogen sources.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0002058","FYPO:0002057","FYPO:0002060"],"is_obsolete":false,"name":"decreased cell population growth on lysine and serine nitrogen source","synonyms":[{"name":"decreased vegetative cell growth on lysine and serine nitrogen source","type":"exact"}],"termid":"FYPO:0009092"}


id: PBO:0080622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 64","termid":"PBO:0080622"}


id: PBO:0040623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BANF1 pseudogene 2","termid":"PBO:0040623"}


id: FYECO:0000230
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in glucose-based medium containing much less nitrogen than standard minimal medium (such as EMM). Note that for mating assays sporulation medium may be more appropriate.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low nitrogen glucose MM","synonyms":[{"name":"low nitrogen glucose minimal medium","type":"exact"}],"termid":"FYECO:0000230"}


id: PBO:0069034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 279, pseudogene","termid":"PBO:0069034"}


id: PBO:0046934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 50 member B","termid":"PBO:0046934"}


id: PBO:0000142
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.3.11","termid":"PBO:0000142"}


id: GO:0032713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-4 production.","definition_xrefs":["GOC:mah","PMID:29778524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-4 production","termid":"GO:0032673"},{"relation_name":"negatively_regulates","term_name":"interleukin-4 production","termid":"GO:0032633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-4 production","secondary_identifiers":["GO:0150134","GO:0045403"],"synonyms":[{"name":"down regulation of interleukin-4 production","type":"exact"},{"name":"down-regulation of interleukin-4 production","type":"exact"},{"name":"downregulation of interleukin-4 production","type":"exact"},{"name":"inhibition of interleukin-4 production","type":"narrow"},{"name":"negative regulation of IL-4 production","type":"exact"},{"name":"negative regulation of interleukin-4 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-4 secretion","type":"narrow"}],"termid":"GO:0032713"}


id: PBO:0078227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 12-2 (pseudogene)","termid":"PBO:0078227"}


id: PBO:0056703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meis homeobox 3 pseudogene 1","termid":"PBO:0056703"}


id: PBO:0000340
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates ctr4","termid":"PBO:0000340"}


id: PBO:0000811
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.1.109","termid":"PBO:0000811"}


id: GO:0031284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of guanylate cyclase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cyclase activity","termid":"GO:0031281"},{"relation_name":"is_a","term_name":"regulation of guanylate cyclase activity","termid":"GO:0031282"},{"relation_name":"is_a","term_name":"positive regulation of lyase activity","termid":"GO:0051349"},{"relation_name":"is_a","term_name":"positive regulation of purine nucleotide biosynthetic process","termid":"GO:1900373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"positive regulation of guanylate cyclase activity","synonyms":[{"name":"activation of guanylate cyclase activity","type":"narrow"},{"name":"stimulation of guanylate cyclase activity","type":"narrow"},{"name":"up regulation of guanylate cyclase activity","type":"exact"},{"name":"up-regulation of guanylate cyclase activity","type":"exact"},{"name":"upregulation of guanylate cyclase activity","type":"exact"}],"termid":"GO:0031284"}


id: GO:0120235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of posttranslational protein translocation through the ER membrane.","definition_xrefs":["GOC:rn","GOC:krc","PMID:32513868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"regulates","term_name":"post-translational protein targeting to membrane, translocation","termid":"GO:0031204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of post-translational protein targeting to membrane, translocation","synonyms":[{"name":"regulation of N-terminal signal peptide-independent translocation into the ER","type":"narrow"},{"name":"regulation of SRP-independent endoplasmic reticulum protein-membrane targeting, translocation","type":"narrow"},{"name":"regulation of posttranslational endoplasmic reticulum membrane protein translocation","type":"exact"},{"name":"regulation of posttranslational protein targeting to membrane, translocation","type":"exact"}],"termid":"GO:0120235"}


id: PBO:0042698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chymotrypsin like elastase 3B","termid":"PBO:0042698"}


id: PBO:0089444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMN-dependent alpha-hydroxy acid dehydrogenase","termid":"PBO:0089444"}


id: PATO:0000728
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000728 metabolic function value (obsolete PATO:0000728)","termid":"PATO:0000728"}


id: GO:1903816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of collecting lymphatic vessel constriction.","definition_xrefs":["GOC:TermGenie","PMID:23897233","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of collecting lymphatic vessel constriction","termid":"GO:1903814"},{"relation_name":"positively_regulates","term_name":"collecting lymphatic vessel constriction","termid":"GO:1990192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of collecting lymphatic vessel constriction","synonyms":[{"name":"activation of collecting lymphatic vessel constriction","type":"narrow"},{"name":"activation of lymphatic vessel myogenic constriction","type":"narrow"},{"name":"positive regulation of lymphatic vessel myogenic constriction","type":"exact"},{"name":"up regulation of collecting lymphatic vessel constriction","type":"exact"},{"name":"up regulation of lymphatic vessel myogenic constriction","type":"exact"},{"name":"up-regulation of collecting lymphatic vessel constriction","type":"exact"},{"name":"up-regulation of lymphatic vessel myogenic constriction","type":"exact"},{"name":"upregulation of collecting lymphatic vessel constriction","type":"exact"},{"name":"upregulation of lymphatic vessel myogenic constriction","type":"exact"}],"termid":"GO:1903816"}


id: GO:1905871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to cell leading edge.","definition_xrefs":["GO_REF:0000058","PMID:26324884","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to cell leading edge","termid":"GO:1902463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to cell leading edge","synonyms":[{"name":"regulation of protein localisation in cell leading edge","type":"exact"},{"name":"regulation of protein localisation to cell leading edge","type":"exact"},{"name":"regulation of protein localization in cell leading edge","type":"exact"}],"termid":"GO:1905871"}


id: GO:0036157
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Outer arm structure present on the outer doublet microtubules of ciliary and flagellar axonemes. Outer dynein arms contain 2-3 heavy chains, two or more intermediate chains and a cluster of 4-8 light chains. Inner and outer dynein arms have different functions in the generation of microtubule-based motility.","definition_xrefs":["GOC:BHF","PMID:2557057","GOC:vk","PMID:6218174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal dynein complex","termid":"GO:0005858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0015630","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"outer dynein arm","synonyms":[{"name":"outer dynein arm complex","type":"exact"}],"termid":"GO:0036157"}


id: MOD:00030
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an N-formyl-L-methionine, a natural pretranslational modification.","definition_xrefs":["PubMed:10825024","OMSSA:22","PubMed:8758896","RESID:AA0021#FMET","PubMed:3042771","PubMed:2165784","ChEBI:33718","Unimod:107#N-term","PubMed:11152118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formylated residue","termid":"MOD:00409"},{"relation_name":"is_a","term_name":"natural, non-standard encoded residue","termid":"MOD:00868"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-formyl-L-methionine residue","synonyms":[{"name":"(2S)-2-formylamino-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-formamido-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-formylamino-4-(methylthio)butanoic acid","type":"exact"},{"name":"2-formylazanyl-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"Addition of N-formyl met","type":"related"},{"name":"FormylMet","type":"related"},{"name":"MOD_RES N-formylmethionine","type":"exact"},{"name":"N-formyl-L-methionine","type":"exact"},{"name":"N-formylated L-methionine","type":"exact"},{"name":"fMet","type":"exact"},{"name":"nformylmet","type":"exact"}],"termid":"MOD:00030"}


id: GO:0071837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an HMG box domain, a protein domain that consists of three helices in an irregular array. HMG-box domains are found in one or more copies in HMG-box proteins, which form a large, diverse family involved in the regulation of DNA-dependent processes such as transcription, replication, and strand repair, all of which require the bending and unwinding of chromatin.","definition_xrefs":["GOC:yaf","InterPro:IPR009071","PMID:18445004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"HMG box domain binding","termid":"GO:0071837"}


id: PBO:0065094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRKAG2 antisense RNA 1","termid":"PBO:0065094"}


id: GO:0106299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An active host response phase of acute inflammation driven by specialized pro-resolving mediators (SPMs) and signaling pathways, enabling timely tissue regeneration and return of function.","definition_xrefs":["PMID:28087575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute inflammatory response","termid":"GO:0002526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"resolution phase response","termid":"GO:0106299"}


id: PBO:0066224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 27","termid":"PBO:0066224"}


id: PBO:0089871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine decarboxylase T subunit","termid":"PBO:0089871"}


id: PBO:0001786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NTPase Ylf2 (predicted)","termid":"PBO:0001786"}


id: GO:0000363
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the first transesterification reaction of U12-type spliceosomal mRNA splicing. The intron branch site adenosine is the nucleophile attacking the 5' splice site, resulting in cleavage at this position. In cis splicing, this is the step that forms a lariat structure of the intron RNA, which is still joined to the 3' exon. The catalytic site is thought to be formed by U6atac snRNA and/or U2atac snRNA, and/or associated proteins.","definition_xrefs":["GOC:krc","ISBN:0879695897"],"gene_count":0,"genotype_count":0,"name":"obsolete first U12-type spliceosomal transesterification activity (obsolete GO:0000363)","synonyms":[{"name":"first U12-type spliceosomal transesterification activity","type":"exact"},{"name":"lariat formation, 5'-splice site cleavage","type":"broad"}],"termid":"GO:0000363"}


id: GO:0090109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of cell-substrate junction assembly. Cell-substrate junction assembly is the aggregation, arrangement and bonding together of a set of components to form a junction between a cell and its substrate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-substrate junction organization","termid":"GO:0150116"},{"relation_name":"is_a","term_name":"regulation of cell junction assembly","termid":"GO:1901888"},{"relation_name":"regulates","term_name":"cell-substrate junction assembly","termid":"GO:0007044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of cell-substrate junction assembly","termid":"GO:0090109"}


id: PBO:0068375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 168","termid":"PBO:0068375"}


id: GO:0099004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any signal transduction pathway involving calmodulin dependent kinase activity.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete calmodulin dependent kinase signaling pathway (obsolete GO:0099004)","synonyms":[{"name":"CAMK signaling pathway","type":"exact"}],"termid":"GO:0099004"}


id: PBO:0073910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC16A1 pseudogene 1","termid":"PBO:0073910"}


id: PBO:0005802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element","termid":"PBO:0005802"}


id: GO:0009645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a low light intensity stimulus. Low light intensity is defined as a level of electromagnetic radiation at or below 0.1 micromols/m2.","definition_xrefs":["GOC:go_curators","GOC:mtg_far_red"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light intensity","termid":"GO:0009642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to low light intensity stimulus","termid":"GO:0009645"}


id: PBO:0077100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 8B pseudogene 1","termid":"PBO:0077100"}


id: PBO:0042079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 146","termid":"PBO:0042079"}


id: PBO:0056574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPK regulated corepressor interacting protein 2 pseudogene 1","termid":"PBO:0056574"}


id: PBO:0042904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofilin 1 pseudogene 1","termid":"PBO:0042904"}


id: PBO:0086690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; induced by cell wall perturbation","termid":"PBO:0086690"}


id: GO:1902961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process.","definition_xrefs":["PMID:24577224","GO_REF:0000059","GOC:TermGenie","GOC:sjp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endopeptidase activity","termid":"GO:0010950"},{"relation_name":"is_a","term_name":"regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","termid":"GO:1902959"},{"relation_name":"is_a","term_name":"positive regulation of amyloid precursor protein catabolic process","termid":"GO:1902993"},{"relation_name":"is_a","term_name":"positive regulation of aspartic-type peptidase activity","termid":"GO:1905247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","synonyms":[{"name":"activation of aspartate protease activity involved in APP catabolic process","type":"narrow"},{"name":"activation of aspartate protease activity involved in APP catabolism","type":"narrow"},{"name":"activation of aspartate protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of aspartate protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of aspartate protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of aspartate protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"activation of aspartic endopeptidase activity involved in APP catabolic process","type":"narrow"},{"name":"activation of aspartic endopeptidase activity involved in APP catabolism","type":"narrow"},{"name":"activation of aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"activation of aspartic protease activity involved in APP catabolic process","type":"narrow"},{"name":"activation of aspartic protease activity involved in APP catabolism","type":"narrow"},{"name":"activation of aspartic protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of aspartic protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of aspartic protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"activation of aspartic-type endopeptidase activity involved in APP catabolic process","type":"narrow"},{"name":"activation of aspartic-type endopeptidase activity involved in APP catabolism","type":"narrow"},{"name":"activation of aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"activation of aspartyl protease activity involved in APP catabolic process","type":"narrow"},{"name":"activation of aspartyl protease activity involved in APP catabolism","type":"narrow"},{"name":"activation of aspartyl protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of aspartyl protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of aspartyl protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"activation of carboxyl protease activity involved in APP catabolic process","type":"narrow"},{"name":"activation of carboxyl protease activity involved in APP catabolism","type":"narrow"},{"name":"activation of carboxyl protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of carboxyl protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of carboxyl protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"positive regulation of aspartate protease activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of aspartate protease activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of aspartate protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of aspartate protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"positive regulation of aspartate protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of aspartate protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"positive regulation of aspartic endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of aspartic endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"positive regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"positive regulation of aspartic protease activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of aspartic protease activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of aspartic protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"positive regulation of aspartic protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of aspartic protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"positive regulation of aspartic-type endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of aspartic-type endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"positive regulation of aspartyl protease activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of aspartyl protease activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of aspartyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"positive regulation of aspartyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of aspartyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"positive regulation of carboxyl protease activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of carboxyl protease activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of carboxyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"positive regulation of carboxyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of carboxyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of aspartate protease activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of aspartate protease activity involved in APP catabolism","type":"exact"},{"name":"up regulation of aspartate protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of aspartate protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of aspartate protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of aspartate protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of aspartic endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of aspartic endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"up regulation of aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of aspartic protease activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of aspartic protease activity involved in APP catabolism","type":"exact"},{"name":"up regulation of aspartic protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of aspartic protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of aspartic protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of aspartic-type endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of aspartic-type endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"up regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of aspartyl protease activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of aspartyl protease activity involved in APP catabolism","type":"exact"},{"name":"up regulation of aspartyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of aspartyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of aspartyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of carboxyl protease activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of carboxyl protease activity involved in APP catabolism","type":"exact"},{"name":"up regulation of carboxyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of carboxyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of carboxyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of aspartate protease activity involved in APP catabolic process","type":"exact"},{"name":"up-regulation of aspartate protease activity involved in APP catabolism","type":"exact"},{"name":"up-regulation of aspartate protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of aspartate protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of aspartate protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of aspartate protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of aspartic endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"up-regulation of aspartic endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"up-regulation of aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of aspartic protease activity involved in APP catabolic process","type":"exact"},{"name":"up-regulation of aspartic protease activity involved in APP catabolism","type":"exact"},{"name":"up-regulation of aspartic protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of aspartic protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of aspartic protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of aspartic-type endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"up-regulation of aspartic-type endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"up-regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of aspartyl protease activity involved in APP catabolic process","type":"exact"},{"name":"up-regulation of aspartyl protease activity involved in APP catabolism","type":"exact"},{"name":"up-regulation of aspartyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of aspartyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of aspartyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of carboxyl protease activity involved in APP catabolic process","type":"exact"},{"name":"up-regulation of carboxyl protease activity involved in APP catabolism","type":"exact"},{"name":"up-regulation of carboxyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of carboxyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of carboxyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of aspartate protease activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of aspartate protease activity involved in APP catabolism","type":"exact"},{"name":"upregulation of aspartate protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of aspartate protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of aspartate protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of aspartate protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of aspartic endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of aspartic endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"upregulation of aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of aspartic protease activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of aspartic protease activity involved in APP catabolism","type":"exact"},{"name":"upregulation of aspartic protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of aspartic protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of aspartic protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of aspartic-type endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of aspartic-type endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"upregulation of aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of aspartyl protease activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of aspartyl protease activity involved in APP catabolism","type":"exact"},{"name":"upregulation of aspartyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of aspartyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of aspartyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of carboxyl protease activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of carboxyl protease activity involved in APP catabolism","type":"exact"},{"name":"upregulation of carboxyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of carboxyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of carboxyl protease activity involved in amyloid precursor protein degradation","type":"exact"}],"termid":"GO:1902961"}


id: PBO:0057940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3665","termid":"PBO:0057940"}


id: GO:0009639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red or far red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. Far red light is electromagnetic radiation of wavelength 700-800nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.","definition_xrefs":["GOC:ai","GOC:mtg_far_red"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light stimulus","termid":"GO:0009416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to red or far red light","termid":"GO:0009639"}


id: PBO:0069109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 358, pseudogene","termid":"PBO:0069109"}


id: PBO:0063716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglucomutase 5 pseudogene 4","termid":"PBO:0063716"}


id: PBO:0070422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose-5-phosphate-3-epimerase like 1","termid":"PBO:0070422"}


id: PR:P21537
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp9 gene.","definition_xrefs":["UniProtKB:P21537","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit 9, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.10","synonyms":[{"name":"Spom972h-atp9","type":"exact"},{"name":"lipid-binding protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P21537"}


id: PBO:0039092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-hook containing transcription factor 1","termid":"PBO:0039092"}


id: PR:O74809
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- alb1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2D10.19c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.19c","synonyms":[{"name":"Spom972h-alb1","type":"exact"}],"termid":"PR:O74809"}


id: PBO:0035851
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0035851"}


id: PBO:0001037
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains CRE element","termid":"PBO:0001037"}


id: PBO:0045421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent-paired related homeobox pseudogene 1","termid":"PBO:0045421"}


id: GO:0062194
data:
  {"annotated_genes":["SJAG_04841"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93339],"is_not":false,"summary":null,"term":"GO:0062194"}]},"cv_name":"cellular_component","definition":"A microtubule minus end that is part of a cytoplasmic microtubule.","definition_xrefs":["PMID:18061564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule minus-end","termid":"GO:0036449"},{"relation_name":"part_of","term_name":"cytoplasmic microtubule","termid":"GO:0005881"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0005737"],"is_obsolete":false,"name":"cytoplasmic microtubule minus-end","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062194","terms_by_termid":{"GO:0062194":null}}


id: FYPO:0007365
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphoenolpyruvate measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular phosphoenolpyruvate level","synonyms":[{"name":"decreased cellular PEP level","type":"exact"},{"name":"decreased cellular phosphoenolpyruvate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphoenolpyruvate level during vegetative growth","type":"exact"},{"name":"decreased level of phosphoenolpyruvate in cell","type":"exact"},{"name":"reduced cellular phosphoenolpyruvate level","type":"exact"}],"termid":"FYPO:0007365"}


id: PBO:0086862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative SCF-ubiquitin ligase F-box protein; based on both genetic and physical interactions and sequence similarity; identified in association with Cdc53p, Skp1p and Ubi4 in large and small-scale studies","termid":"PBO:0086862"}


id: PBO:0072028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S9 pseudogene 4","termid":"PBO:0072028"}


id: PBO:0113194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major of three pyruvate decarboxylase isozymes; key enzyme in alcoholic fermentation; decarboxylates pyruvate to acetaldehyde; involved in amino acid catabolism; subject to glucose-, ethanol-, and autoregulation; activated by phosphorylation in response to glucose levels; N-terminally propionylated in vivo; protein tyrosine nitration on Tyr157 or Tyr344 inhibits activity and impairs fermentation","termid":"PBO:0113194"}


id: PBO:0109375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 8","termid":"PBO:0109375"}


id: GO:0047605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2-hydroxy-2-methyl-3-oxobutanoate = (R)-2-acetoin + CO2.","definition_xrefs":["EC:4.1.1.5","MetaCyc:ACETOLACTATE-DECARBOXYLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"acetolactate decarboxylase activity","secondary_identifiers":["RHEA:21580"],"synonyms":[{"name":"(S)-2-hydroxy-2-methyl-3-oxobutanoate carboxy-lyase [(R)-2-acetoin-forming]","type":"related"},{"name":"(S)-2-hydroxy-2-methyl-3-oxobutanoate carboxy-lyase activity","type":"related"},{"name":"alpha-acetolactate decarboxylase activity","type":"related"}],"termid":"GO:0047605"}


id: PBO:0083504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF ARG81/YML099C","termid":"PBO:0083504"}


id: PBO:0072781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO1 activating enzyme subunit 1","termid":"PBO:0072781"}


id: PBO:0073851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member 3 pseudogene 1","termid":"PBO:0073851"}


id: PBO:0056008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated","termid":"PBO:0056008"}


id: PBO:0081753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 682","termid":"PBO:0081753"}


id: PBO:0016969
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial complex V deficiency, nuclear 2","termid":"PBO:0016969"}


id: GO:0000070
data:
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cell cycle process in which replicated homologous chromosomes are organized and then physically separated and apportioned to two sets during the mitotic cell cycle. 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id: SO:0000851
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a CDS.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"},{"relation_name":"part_of","term_name":"CDS","termid":"SO:0000316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_region","synonyms":[{"name":"CDS region","type":"exact"}],"termid":"SO:0000851"}


id: GO:0032632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-3 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-3 production","secondary_identifiers":["GO:0072601","GO:0042223"],"synonyms":[{"name":"IL-3 production","type":"exact"},{"name":"interleukin-3 biosynthetic process","type":"narrow"},{"name":"interleukin-3 secretion","type":"narrow"}],"termid":"GO:0032632"}


id: PR:O42897
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02558","PANTHER:PTHR10758:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit rpn3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.01","secondary_identifiers":["UniProtKB:O42897"],"synonyms":[{"name":"Spom972h-PSMD3","type":"exact"}],"termid":"PR:O42897"}


id: GO:0100004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates peroxisome organization.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of peroxisome organization by transcription from RNA polymerase II promoter (obsolete GO:0100004)","termid":"GO:0100004"}


id: PBO:0083561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified gene SLM3/YDL033C; YDL032W is not an essential gene","termid":"PBO:0083561"}


id: PBO:0003930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE associated Golgi protein (predicted)","termid":"PBO:0003930"}


id: PBO:0062316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily B member 1","termid":"PBO:0062316"}


id: GO:1901135
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id: PBO:0049467
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id: GO:0098674
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id: FYPO:0005745
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id: GO:0018155
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id: PATO:0001404
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id: PBO:0088313
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id: PBO:0062706
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id: PBO:0030800
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id: FYPO:0004375
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id: PR:Q9UT79
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- msc1 gene.","definition_xrefs":["UniProtKB:Q9UT79","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multicopy suppressor of chk1 protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.11c","synonyms":[{"name":"Spom972h-msc1","type":"exact"}],"termid":"PR:Q9UT79"}


id: PR:Q10719
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fus1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell fusion protein fus1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G4.02c","synonyms":[{"name":"Spom972h-fus1","type":"exact"}],"termid":"PR:Q10719"}


id: GO:0046313
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id: PBO:0068319
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id: PBO:0113540
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id: PBO:0005502
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate kinase domain family protein","termid":"PBO:0005502"}


id: GO:0000900
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id: GO:0015889
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id: PBO:0074075
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id: GO:0032062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of translation as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translation in response to stress","termid":"GO:0032056"},{"relation_name":"is_a","term_name":"regulation of translation in response to osmotic stress","termid":"GO:0043557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of translation in response to osmotic stress","synonyms":[{"name":"activation of translation in response to osmotic stress","type":"narrow"},{"name":"stimulation of translation in response to osmotic stress","type":"narrow"},{"name":"up regulation of translation in response to osmotic stress","type":"exact"},{"name":"up-regulation of translation in response to osmotic stress","type":"exact"},{"name":"upregulation of translation in response to osmotic stress","type":"exact"}],"termid":"GO:0032062"}


id: PBO:0034532
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_break-induced_loss_of_heterozygosity","termid":"PBO:0034532"}


id: GO:0035518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by addition of a single ubiquitin group.","definition_xrefs":["PMID:18206970"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A monoubiquitination (obsolete GO:0035518)","termid":"GO:0035518"}


id: PBO:0030071
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_valine_import","termid":"PBO:0030071"}


id: PBO:0039014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFG3 like matrix AAA peptidase subunit 2","termid":"PBO:0039014"}


id: PBO:0065867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB24, member RAS oncogene family","termid":"PBO:0065867"}


id: MOD:01610
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to L-threonine methyl ester.","definition_xrefs":["PubMed:19745839","RESID:AA0507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-carboxyl methylated residue","termid":"MOD:01689"},{"relation_name":"is_a","term_name":"O-methylated threonine","termid":"MOD:01803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"L-threonine methyl ester","synonyms":[{"name":"L-threonine methyl ester","type":"exact"},{"name":"MOD_RES Threonine methyl ester","type":"exact"},{"name":"methyl (2S,3R)-2-amino-3-hydroxybutanoate","type":"exact"},{"name":"methyl L-threoninate","type":"exact"}],"termid":"MOD:01610"}


id: GO:0047760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + an acid + CoA = AMP + diphosphate + an acyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete butyrate-CoA ligase activity (obsolete GO:0047760)","termid":"GO:0047760"}


id: GO:0034130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to toll-like receptor 1.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface pattern recognition receptor signaling pathway","termid":"GO:0002752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"toll-like receptor 1 signaling pathway","synonyms":[{"name":"TLR1 signaling pathway","type":"exact"},{"name":"toll-like receptor 1 signalling pathway","type":"exact"}],"termid":"GO:0034130"}


id: PBO:0063611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PFDN1 pseudogene 2","termid":"PBO:0063611"}


id: PBO:0028142
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_cellular_response_to_oxidative_stress","termid":"PBO:0028142"}


id: PBO:0069326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 584, pseudogene","termid":"PBO:0069326"}


id: _global:contained_by
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X contained_by Y iff X starts after start of Y and X ends before end of Y.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contained_by","termid":"_global:contained_by"}


id: GO:0038181
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with a bile acid and transmitting the signal to initiate a change in cell activity. A bile acid is any member of a group of steroid carboxylic acids occurring in bile.","definition_xrefs":["PMID:12718893","GOC:bf","PMID:10334992"],"gene_count":0,"genotype_count":0,"name":"obsolete bile acid receptor activity (obsolete GO:0038181)","termid":"GO:0038181"}


id: GO:0072141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a renal interstitial fibroblast over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"kidney interstitial fibroblast differentiation","termid":"GO:0072071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal interstitial fibroblast development","synonyms":[{"name":"kidney interstitial cell development","type":"exact"}],"termid":"GO:0072141"}


id: PBO:0043131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBY1 interacting BAR domain containing 2","termid":"PBO:0043131"}


id: PBO:0011124
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Warsaw breakage syndrome","termid":"PBO:0011124"}


id: PBO:0077056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombospondin type 1 domain containing 1 pseudogene 1","termid":"PBO:0077056"}


id: GO:0002572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a pro-T cell. Pro-T cells are the earliest stage of the T cell lineage but are not fully committed.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoid progenitor cell differentiation","termid":"GO:0002320"},{"relation_name":"part_of","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pro-T cell differentiation","synonyms":[{"name":"pro-T lymphocyte differentiation","type":"exact"}],"termid":"GO:0002572"}


id: GO:1902074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a salt stimulus.","definition_xrefs":["GOC:mls","PMID:16666921","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to salt","synonyms":[{"name":"response to salinity","type":"narrow"}],"termid":"GO:1902074"}


id: PBO:0051708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase K","termid":"PBO:0051708"}


id: PBO:0086038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function, highly conserved across species; homolog of human CYB5R4; null mutant displays reduced frequency of mitochondrial genome loss; AIM33 has a paralog, PGA3, that arose from the whole genome duplication","termid":"PBO:0086038"}


id: GO:0002660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of peripheral tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of tolerance induction dependent upon immune response","termid":"GO:0002654"},{"relation_name":"is_a","term_name":"regulation of peripheral tolerance induction","termid":"GO:0002658"},{"relation_name":"positively_regulates","term_name":"peripheral tolerance induction","termid":"GO:0002465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peripheral tolerance induction","synonyms":[{"name":"activation of peripheral tolerance induction","type":"narrow"},{"name":"stimulation of peripheral tolerance induction","type":"narrow"},{"name":"up regulation of peripheral tolerance induction","type":"exact"},{"name":"up-regulation of peripheral tolerance induction","type":"exact"},{"name":"upregulation of peripheral tolerance induction","type":"exact"}],"termid":"GO:0002660"}


id: PBO:0055116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2535","termid":"PBO:0055116"}


id: GO:0051653
data:
  {"annotated_genes":["SJAG_02737","SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93043,113022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000132"}]},"cv_name":"biological_process","definition":"Any process in which is the spindle is transported to, and/or maintained in, a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02695":null,"SJAG_02737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0007049"],"is_obsolete":false,"name":"spindle localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment and maintenance of spindle localization","type":"exact"},{"name":"spindle localisation","type":"exact"}],"termid":"GO:0051653","terms_by_termid":{"GO:0000132":null}}


id: PBO:0079830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream master lncRNA of the inflammatory chemokine locus","termid":"PBO:0079830"}


id: FYPO:0006878
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of normal morphology (i.e. size, shape, and structure) that undergoes two or more rounds of cell division in which septum assembly is abnormal, and then dies.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions","termid":"FYPO:0002430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, with abnormal septation","synonyms":[{"name":"inviable after spore germination, multiple cell divisions, with abnormal septum assembly","type":"exact"},{"name":"inviable after spore germination, multiple cell divisions, with abnormal septum formation","type":"exact"},{"name":"inviable following spore germination, multiple cell divisions, with abnormal septation","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, with abnormal septation","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, with abnormal septation","type":"exact"}],"termid":"FYPO:0006878"}


id: GO:0047733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-D-glucose = CDP-4-dehydro-6-deoxy-D-glucose + H2O.","definition_xrefs":["EC:4.2.1.45","RHEA:17153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"CDP-glucose 4,6-dehydratase activity","secondary_identifiers":["MetaCyc:CDP-GLUCOSE-46-DEHYDRATASE-RXN","KEGG_REACTION:R02426"],"synonyms":[{"name":"CDP-glucose 4,6-hydro-lyase (CDP-4-dehydro-6-deoxy-D-glucose-forming)","type":"related"},{"name":"CDP-glucose 4,6-hydro-lyase activity","type":"related"},{"name":"CDPglucose 4,6-dehydratase activity","type":"related"},{"name":"CDPglucose 4,6-hydro-lyase activity","type":"related"},{"name":"cytidine diphosphoglucose oxidoreductase activity","type":"related"}],"termid":"GO:0047733"}


id: GO:0016813
data:
  {"annotated_genes":["SJAG_03398","SJAG_00035"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004037"},{"annotations":[109273,93416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004053"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amidine, a compound of the form R-C(=NH)-NH2.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00035":null,"SJAG_03398":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.5.3.-"],"termid":"GO:0016813","terms_by_termid":{"GO:0004037":null,"GO:0004053":null}}


id: PBO:0049672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydratase 4","termid":"PBO:0049672"}


id: PBO:0002840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase kinase Win1","termid":"PBO:0002840"}


id: GO:0106439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: L-lysine(out) + L-arginine(in) = L-lysine(in) + L-arginine(out).","definition_xrefs":["RHEA:70827","PMID:10903140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine transmembrane transporter activity","termid":"GO:0015189"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"L-arginine transmembrane transporter activity","termid":"GO:0061459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"L-lysine:L-arginine antiporter activity","termid":"GO:0106439"}


id: PBO:0091575
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by mouse HUS1","termid":"PBO:0091575"}


id: PBO:0045372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamine biosynthesis 6","termid":"PBO:0045372"}


id: PBO:0041901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBARP divergent transcript","termid":"PBO:0041901"}


id: PBO:0036174
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutamate_dehydrogenase_(NADP+)_activity_during_cellular_response_to_iron_ion_starvation","termid":"PBO:0036174"}


id: PBO:0074341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1","termid":"PBO:0074341"}


id: PBO:0075120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 169","termid":"PBO:0075120"}


id: GO:0140793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H2AX tyrosine phosphate (position 142) + H2O = histone H2AX tyrosine (position 142) + phosphate.","definition_xrefs":["PMID:19234442","PMID:19351884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone phosphatase activity","termid":"GO:0140789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0140096","GO:0003824","GO:0004721","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"histone H2AXY142 phosphatase activity","synonyms":[{"name":"histone H2-Y142 phosphatase activity","type":"exact"},{"name":"histone H2Y142 phosphatase activity","type":"related"},{"name":"histone tyrosine phosphatase activity (H2-Y142 specific)","type":"exact"}],"termid":"GO:0140793"}


id: GO:0072696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA recombination within the telomere.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA recombination","termid":"GO:0045911"},{"relation_name":"is_a","term_name":"regulation of DNA recombination at telomere","termid":"GO:0072695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"positive regulation of DNA recombination at telomere","synonyms":[{"name":"activation of telomeric recombination at telomere","type":"narrow"},{"name":"positive regulation of telomeric recombination","type":"exact"},{"name":"up regulation of telomeric recombination at telomere","type":"exact"},{"name":"up-regulation of telomeric recombination at telomere","type":"exact"},{"name":"upregulation of telomeric recombination at telomere","type":"exact"}],"termid":"GO:0072696"}


id: PBO:0014268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human TMEM165 homolog, congenital disorders of glycosylation","termid":"PBO:0014268"}


id: PBO:0065068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich protein HaeIII subfamily 2","termid":"PBO:0065068"}


id: PBO:0058157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4452","termid":"PBO:0058157"}


id: PBO:0051240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-51-2 (pseudogene)","termid":"PBO:0051240"}


id: PBO:0051582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 17 receptor E like","termid":"PBO:0051582"}


id: PBO:0080897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta","termid":"PBO:0080897"}


id: FYPO:0002231
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells that are curved along the long axis. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, curved cells (obsolete FYPO:0002231)","synonyms":[{"name":"inviable microcolony, curved vegetative cells","type":"exact"}],"termid":"FYPO:0002231"}


id: GO:0030578
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of PML bodies, a class of nuclear body; they react against SP100 auto-antibodies (PML = promyelocytic leukemia).","definition_xrefs":["PMID:10806078","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body organization","termid":"GO:0030575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"PML body organization","synonyms":[{"name":"PML body organisation","type":"exact"},{"name":"PML body organization and biogenesis","type":"related"}],"termid":"GO:0030578"}


id: PBO:0010193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor Cfh2 (predicted)","termid":"PBO:0010193"}


id: GO:0090215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the catalysis of the reaction: ATP + 1-phosphatidyl-1D-myo-inositol 4-phosphate = ADP + 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of 1-phosphatidylinositol-4-phosphate 5-kinase activity (obsolete GO:0090215)","termid":"GO:0090215"}


id: GO:0001947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The tube morphogenesis process in which the primitive heart tube loops asymmetrically. This looping brings the primitive heart chambers into alignment preceding their future integration. Heart looping begins with dextral-looping and ends when the main regional divisions of the mature heart and primordium of the great arterial trunks become established preceding septation.","definition_xrefs":["GOC:dph","PMID:12094232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic heart tube morphogenesis","termid":"GO:0003143"},{"relation_name":"part_of","term_name":"determination of heart left/right asymmetry","termid":"GO:0061371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart looping","synonyms":[{"name":"cardiac looping","type":"exact"}],"termid":"GO:0001947"}


id: PBO:0060752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B3 pseudogene 2","termid":"PBO:0060752"}


id: PBO:0090657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 6 Pre5","termid":"PBO:0090657"}


id: PBO:0077752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of myb1 like 2 membrane trafficking protein","termid":"PBO:0077752"}


id: PBO:0047261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 242 member D","termid":"PBO:0047261"}


id: PBO:0075630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 1B","termid":"PBO:0075630"}


id: PBO:0029757
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_5'-adenosine_monophosphate_hydrolase_activity","termid":"PBO:0029757"}


id: GO:0043632
data:
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id: GO:1903557
data:
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id: PBO:0058456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5100","termid":"PBO:0058456"}


id: GO:1900094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of transcription from RNA polymerase II promoter that is involved in determination of left/right symmetry.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in determination of left/right symmetry (obsolete GO:1900094)","synonyms":[{"name":"global transcription regulation from Pol II promoter of determination of left/right asymmetry","type":"related"},{"name":"global transcription regulation from Pol II promoter of determination of left/right symmetry","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter of determination of left/right asymmetry","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter of determination of left/right symmetry","type":"related"},{"name":"regulation of global transcription from Pol II promoter of determination of left/right asymmetry","type":"related"},{"name":"regulation of global transcription from Pol II promoter of determination of left/right symmetry","type":"related"},{"name":"regulation of transcription from Pol II promoter of determination of left/right asymmetry","type":"exact"},{"name":"regulation of transcription from Pol II promoter of determination of left/right symmetry","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter of determination of left/right asymmetry","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter of determination of left/right symmetry","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter, global of determination of left/right asymmetry","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global of determination of left/right symmetry","type":"related"}],"termid":"GO:1900094"}


id: GO:0032812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of epinephrine.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epinephrine secretion","termid":"GO:0014060"},{"relation_name":"is_a","term_name":"positive regulation of catecholamine secretion","termid":"GO:0033605"},{"relation_name":"positively_regulates","term_name":"epinephrine secretion","termid":"GO:0048242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of epinephrine secretion","synonyms":[{"name":"activation of epinephrine secretion","type":"narrow"},{"name":"positive regulation of adrenaline secretion","type":"exact"},{"name":"stimulation of epinephrine secretion","type":"narrow"},{"name":"up regulation of epinephrine secretion","type":"exact"},{"name":"up-regulation of epinephrine secretion","type":"exact"},{"name":"upregulation of epinephrine secretion","type":"exact"}],"termid":"GO:0032812"}


id: FYECO:0000128
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition where the pH of the medium or assay buffer is significantly different than the standard pombe growth medium with a pH of ~5.6.","definition_xrefs":["PMID:10467002"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000128 pH (obsolete FYECO:0000128)","termid":"FYECO:0000128"}


id: PBO:0063744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 9","termid":"PBO:0063744"}


id: PBO:0064838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R12A antisense RNA 1","termid":"PBO:0064838"}


id: GO:0018141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl lysine cross-link by the condensation of a cysteine thiol with the carbonyl of the preceding residue and alpha-beta dehydrogenation.","definition_xrefs":["RESID:AA0245"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-lysine thiazolecarboxylic acid (obsolete GO:0018141)","termid":"GO:0018141"}


id: PBO:0048349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 60","termid":"PBO:0048349"}


id: FYPO:0003650
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to glucose starvation is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0006551"],"is_obsolete":false,"name":"decreased protein level during cellular response to glucose starvation","synonyms":[{"name":"decreased protein accumulation during cellular response to glucose starvation","type":"related"},{"name":"decreased protein level during cellular response to glucose depletion","type":"exact"},{"name":"decreased protein level during cellular response to glucose deprivation","type":"exact"},{"name":"decreased protein level during cellular response to glucose limitation","type":"related"},{"name":"decreased protein level during cellular response to glucose starvation during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to glucose starvation during vegetative growth","type":"exact"},{"name":"decreased protein level during glucose starvation","type":"exact"},{"name":"reduced protein level during cellular response to glucose starvation","type":"exact"}],"termid":"FYPO:0003650"}


id: PBO:0001805
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.4.3.-","termid":"PBO:0001805"}


id: FYPO:0003522
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of hercynylcysteine sulfoxide measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell","termid":"FYPO:0000990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular hercynylcysteine sulfoxide level","synonyms":[{"name":"increased cellular hercynylcysteine sulphoxide level","type":"exact"},{"name":"increased hercynylcysteine sulfoxide level","type":"exact"}],"termid":"FYPO:0003522"}


id: GO:0097327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antineoplastic agent stimulus. An antineoplastic agent is a substance that inhibits or prevents the proliferation of neoplasms.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to antineoplastic agent","termid":"GO:0097327"}


id: GO:0048457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the floral whorl are generated and organized.","definition_xrefs":["GOC:go_curators","GOC:PO_curators","PO:0025023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"part_of","term_name":"floral whorl development","termid":"GO:0048438"},{"relation_name":"part_of","term_name":"flower morphogenesis","termid":"GO:0048439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral whorl morphogenesis","secondary_identifiers":["GO:0048414"],"termid":"GO:0048457"}


id: PATO:0001201
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's being shaped in the form of the letter Y.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tripartite","termid":"PATO:0001890"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-shaped","termid":"PATO:0001201"}


id: PR:U3H0A9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1884.01 gene.","definition_xrefs":["UniProtKB:U3H0A9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein SPCC1884.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1884.01","synonyms":[{"name":"Spom972h-SPCC1884.01","type":"exact"}],"termid":"PR:U3H0A9"}


id: PR:P36602
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonucleoside-diphosphate reductase large subunit that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:CNA","PMID:14648198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"ribonucleoside-diphosphate reductase large chain (Schizosaccharomyces pombe)","termid":"PR:000036298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase large chain (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.05","secondary_identifiers":["UniProtKB:P36602","PR:000027719"],"synonyms":[{"name":"Spom972h-cdc22","type":"exact"}],"termid":"PR:P36602"}


id: PBO:0078536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 28","termid":"PBO:0078536"}


id: PBO:0108605
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_characteristic","termid":"PBO:0108605"}


id: PBO:0048830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 14","termid":"PBO:0048830"}


id: GO:0018958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a phenol, any compound containing one or more hydroxyl groups directly attached to an aromatic carbon ring.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound metabolic process","termid":"GO:1901615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenol-containing compound metabolic process","secondary_identifiers":["UM-BBD_pathwayID:phe"],"synonyms":[{"name":"carbolic acid metabolic process","type":"exact"},{"name":"carbolic acid metabolism","type":"exact"},{"name":"hydroxybenzene metabolic process","type":"exact"},{"name":"hydroxybenzene metabolism","type":"exact"},{"name":"phenol-containing compound metabolism","type":"exact"}],"termid":"GO:0018958"}


id: PATO:0001611
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in a bearer by virtue of whether the bearer exhibits color variation or change.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability","termid":"PATO:0001303"},{"relation_name":"towards","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variability of color","termid":"PATO:0001611"}


id: GO:0031255
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The area of a motile cell perpendicular to the direction of movement.","definition_xrefs":["GOC:pg","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral part of cell","termid":"GO:0097574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"lateral part of motile cell","termid":"GO:0031255"}


id: MOD:00152
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S'-(8alpha-FAD)-L-cystine.","definition_xrefs":["RESID:AA0143","Unimod:50#C","PubMed:10220347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD modified residue","termid":"MOD:00895"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(8alpha-FAD)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-[8alpha-riboflavin 5'-(trihydrogen diphosphate) 5'->5'-ester with adenosine]sulfanylpropanoic acid","type":"exact"},{"name":"8alpha-(S-cysteinyl)FAD","type":"exact"},{"name":"FAD","type":"related"},{"name":"Flavin adenine dinucleotide","type":"related"},{"name":"MOD_RES S-8alpha-FAD cysteine","type":"exact"},{"name":"S-(8alpha-FAD)-L-cysteine","type":"exact"},{"name":"S8aFADCys","type":"exact"}],"termid":"MOD:00152"}


id: FYPO:0005220
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein oligomerization is abnormal.","definition_xrefs":["PomBase:mah","GO:0051259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex assembly","termid":"FYPO:0000447"},{"relation_name":"is_a","term_name":"abnormal protein complex organization during vegetative growth","termid":"FYPO:0007402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein oligomerization","synonyms":[{"name":"abnormal protein oligomerisation","type":"exact"},{"name":"abnormal protein oligomerization during mitotic cell cycle","type":"related"},{"name":"abnormal protein oligomerization during vegetative growth","type":"exact"}],"termid":"FYPO:0005220"}


id: PBO:0086778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; YDL241W is not an essential gene","termid":"PBO:0086778"}


id: PBO:0089715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Pex1","termid":"PBO:0089715"}


id: PBO:0087241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine protease and general molecular chaperone; cleaves Roq1p, which modifies the substrate specificity of the Ubr1p Ub-ligase, promoting the stress-induced homeostatically-regulated protein degradation (SHRED) of misfolded and native ER-membrane and cytosolic proteins; chaperone activity involved in the heat stress response; promotes apoptosis through proteolysis of Bir1p; role in lipid homeostasis; mammalian Omi/HtrA2 serine protease family member","termid":"PBO:0087241"}


id: GO:0009231
data:
  {"annotated_genes":["SJAG_02360","SJAG_00376","SJAG_01054","SJAG_04845","SJAG_00480","SJAG_00491","SJAG_02491","SJAG_04711"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83545,97206,102833,103029,106430,110843,111801,113246],"is_not":false,"summary":null,"term":"GO:0009231"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of riboflavin (vitamin B2), the precursor for the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD).","definition_xrefs":["GOC:jl","PMID:10940330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"riboflavin metabolic process","termid":"GO:0006771"},{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"},{"relation_name":"is_a","term_name":"flavin-containing compound biosynthetic process","termid":"GO:0042727"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00376":null,"SJAG_00480":null,"SJAG_00491":null,"SJAG_01054":null,"SJAG_02360":null,"SJAG_02491":null,"SJAG_04711":null,"SJAG_04845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0044281","GO:0006766","GO:0008150"],"is_obsolete":false,"name":"riboflavin biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RIBOSYN2-PWY","Wikipedia:Riboflavin"],"synonyms":[{"name":"riboflavin anabolism","type":"exact"},{"name":"riboflavin biosynthesis","type":"exact"},{"name":"riboflavin formation","type":"exact"},{"name":"riboflavin synthesis","type":"exact"},{"name":"vitamin B2 biosynthesis","type":"exact"},{"name":"vitamin B2 biosynthetic process","type":"exact"},{"name":"vitamin G biosynthesis","type":"exact"},{"name":"vitamin G biosynthetic process","type":"exact"}],"termid":"GO:0009231","terms_by_termid":{"GO:0009231":null}}


id: PR:O94311
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC215.06c gene.","definition_xrefs":["UniProtKB:O94311","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0743 protein C215.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.06c","synonyms":[{"name":"Spom972h-SPBC215.06c","type":"exact"}],"termid":"PR:O94311"}


id: PBO:0000861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate dehydrogenase (lipoamide) phosphatase (predicted)","termid":"PBO:0000861"}


id: GO:0036211
data:
  {"annotated_genes":["SJAG_01418","SJAG_06425","SJAG_04571","SJAG_01860","SJAG_02467","SJAG_04975","SJAG_01570","SJAG_01276","SJAG_04821","SJAG_02341","SJAG_04085","SJAG_00604","SJAG_03843","SJAG_03616","SJAG_03056","SJAG_04231","SJAG_04119","SJAG_03733","SJAG_01302","SJAG_03032","SJAG_03950","SJAG_03311","SJAG_05327","SJAG_03333","SJAG_03932","SJAG_01006","SJAG_02913","SJAG_03871","SJAG_00831","SJAG_04770","SJAG_02996","SJAG_04165","SJAG_04906","SJAG_00615","SJAG_04846","SJAG_03878","SJAG_03506","SJAG_01595","SJAG_00068","SJAG_01972","SJAG_03555","SJAG_00846","SJAG_00747","SJAG_01950","SJAG_04095","SJAG_01416","SJAG_00776","SJAG_01018","SJAG_04954","SJAG_01058","SJAG_01491","SJAG_03066","SJAG_05278","SJAG_00816","SJAG_03656","SJAG_00394","SJAG_04090","SJAG_02163","SJAG_02519","SJAG_00183","SJAG_02523","SJAG_02776","SJAG_03082","SJAG_02488","SJAG_00598","SJAG_03790","SJAG_04127","SJAG_02648","SJAG_01776","SJAG_00033","SJAG_04337","SJAG_02056","SJAG_03115","SJAG_03896","SJAG_04948","SJAG_00720","SJAG_02804","SJAG_00295","SJAG_00924","SJAG_02764","SJAG_04881","SJAG_03325","SJAG_03188","SJAG_00235","SJAG_03774","SJAG_03330","SJAG_02783","SJAG_01985","SJAG_02903","SJAG_02082","SJAG_04363","SJAG_01858","SJAG_01069","SJAG_05348","SJAG_03801","SJAG_01264","SJAG_02102","SJAG_03292","SJAG_00554","SJAG_00334","SJAG_06383","SJAG_00878","SJAG_01227","SJAG_03150","SJAG_03764","SJAG_04544","SJAG_02503","SJAG_05297","SJAG_04011","SJAG_04952","SJAG_03672","SJAG_01389","SJAG_04053","SJAG_05219","SJAG_05977","SJAG_04316","SJAG_00795","SJAG_00437","SJAG_05032","SJAG_00727","SJAG_03676","SJAG_04728","SJAG_00251","SJAG_01021","SJAG_04401","SJAG_03149","SJAG_04924"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110010,88272,99778,87447,83511],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0016255"},{"annotations":[92487,112820,94457,94741,95845,107144,96052,94406,105341,99636,101046,86434,87177,89956,98362,102767,108616,99839,96069],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006488"},{"annotations":[89598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904380"},{"annotations":[89044,89132,99106,87275,94927,104638,96289,107662,110853,94720,84719,111282,96354,99840,112210,84989,94166,90571,105978,108419,85616,92488,102768,103601,113312,89584,97662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[57425],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0033234"},{"annotations":[87504,97371,102537,105047,89055,91356,85702,101338,106387,88937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000338"},{"annotations":[93841,96088,113898,112158,104069,91772,109830,110026,104442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006486"},{"annotations":[114841,96632,96776,111795,107219,105759,113532,101293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017183"},{"annotations":[102005,114112,114442,95705,94829,89200,98778,94821,96823,100566,94828,97400,89199,106771,105073,94831,83578,89197,85267,94980,98851,101110,106765,106963,108761,94830,113392,89198],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006487"},{"annotations":[89202,98631,94811,107145,96392,94814,89204,94834,83579,94835,94832,94812,105342,91385,93949,94833,97409,100995,109831,112927,114113,96053,89203,89201,94813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018279"},{"annotations":[85310,114456,90655,98935,92549,108380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045116"},{"annotations":[101810,106766,96824,100147,94822,100567,98779,106772,114114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006493"},{"annotations":[102006,97598,89082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035269"},{"annotations":[100531,105604,85660,92267,110713,85819,93819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016925"},{"annotations":[113272,104464,92050,101903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032447"}]},"cv_name":"biological_process","definition":"The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). 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id: PBO:0080342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 106 pseudogene","termid":"PBO:0080342"}


id: PBO:0075559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPG7 matrix AAA peptidase subunit, paraplegin","termid":"PBO:0075559"}


id: PBO:0039429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anomalous homeobox","termid":"PBO:0039429"}


id: PBO:0091358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, quiescence specific","termid":"PBO:0091358"}


id: FYPO:0003051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is normal (i.e. indistinguishable from wild type) at a cis-acting homologous chromosome pairing region such as the omt3 locus on chromosome 1 or the sme2 locus on chromosome 2.","definition_xrefs":["PomBase:mah","PMID:23117617","PMID:24173580","PMID:22582262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal homologous chromosome pairing","termid":"FYPO:0003050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal homologous chromosome pairing at cis-acting homologous chromosome pairing region","synonyms":[{"name":"normal homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region","type":"exact"},{"name":"normal synapsis at cis-acting homologous chromosome pairing region","type":"exact"}],"termid":"FYPO:0003051"}


id: GO:0009557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an uncellularized nucleus cellularizes and acquires the specialized features of an antipodal cell.","definition_xrefs":["GOC:mtg_plant","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"megagametogenesis","termid":"GO:0009561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antipodal cell differentiation","termid":"GO:0009557"}


id: GO:0042701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of progesterone, a steroid hormone, by the corpus luteum of the ovary and by the placenta.","definition_xrefs":["GOC:jl","ISBN:0395825172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"is_a","term_name":"steroid hormone secretion","termid":"GO:0035929"},{"relation_name":"part_of","term_name":"luteinization","termid":"GO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"progesterone secretion","termid":"GO:0042701"}


id: PBO:0001525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2009 protein","termid":"PBO:0001525"}


id: PBO:0003446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II complex subunit Rpb4","termid":"PBO:0003446"}


id: RO:0002329
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"this relation holds between c and p when c is part of some c', and c' is capable of p.","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"RO:0002328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"part_of_structure_that_is_capable_of","termid":"RO:0002329"}


id: PBO:0000216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDR kinase Sid2","termid":"PBO:0000216"}


id: FYPO:0003269
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to one or more microtubules does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to microtubule during vegetative growth","synonyms":[{"name":"abolished protein localisation to microtubule during vegetative growth","type":"exact"},{"name":"abolished protein localization to microtubule during mitotic cell cycle","type":"related"},{"name":"protein absent from microtubule","type":"related"},{"name":"protein localization to microtubule abolished","type":"exact"}],"termid":"FYPO:0003269"}


id: GO:0050856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen receptor-mediated signaling pathway","termid":"GO:0050854"},{"relation_name":"regulates","term_name":"T cell receptor signaling pathway","termid":"GO:0050852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of T cell receptor signaling pathway","synonyms":[{"name":"regulation of T lymphocyte receptor signaling pathway","type":"exact"},{"name":"regulation of T lymphocyte receptor signalling pathway","type":"exact"},{"name":"regulation of T-cell receptor signaling pathway","type":"exact"},{"name":"regulation of T-cell receptor signalling pathway","type":"exact"},{"name":"regulation of T-lymphocyte receptor signaling pathway","type":"exact"},{"name":"regulation of T-lymphocyte receptor signalling pathway","type":"exact"},{"name":"regulation of TCR signaling pathway","type":"exact"}],"termid":"GO:0050856"}


id: GO:0097004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an adipokinetic hormone. Adipokinetic hormones (AKHs) are peptide hormones that are involved in the mobilization of sugar and lipids from the insect fat body during energy-requiring activities such as flight and locomotion. They also contribute to hemolymph sugar homeostasis.","definition_xrefs":["PMID:11904407","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone binding","termid":"GO:0017046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"adipokinetic hormone binding","synonyms":[{"name":"AKH binding","type":"exact"}],"termid":"GO:0097004"}


id: GO:0019057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts translation of mRNA into protein in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host gene expression","termid":"GO:0039656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host translation","synonyms":[{"name":"host cell protein synthesis shutoff","type":"broad"},{"name":"modification by virus of host cell mRNA translation","type":"narrow"},{"name":"modulation by virus of host translation","type":"narrow"},{"name":"modulation of host translation by virus","type":"narrow"},{"name":"regulation of host mRNA translation","type":"exact"},{"name":"regulation of host translation","type":"exact"},{"name":"viral perturbation of host cell mRNA translation","type":"narrow"}],"termid":"GO:0019057"}


id: GO:0014017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will differentiate into a neuroblast.","definition_xrefs":["ISBN:0878932585","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"neuroblast differentiation","termid":"GO:0014016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast fate commitment","termid":"GO:0014017"}


id: PBO:0040292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1","termid":"PBO:0040292"}


id: FYPO:0001673
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the nucleus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal nuclear morphology","termid":"FYPO:0001673"}


id: GO:0098921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from postsynapse to presynapse, across the synaptic cleft, mediated by an endocannabinoid ligand.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde trans-synaptic signaling by lipid","termid":"GO:0098920"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by endocannabinoid","termid":"GO:0099542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"retrograde trans-synaptic signaling by endocannabinoid","termid":"GO:0098921"}


id: GO:0015172
data:
  {"annotated_genes":["SJAG_00522","SJAG_00626","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015183"},{"annotations":[94291,92627,99908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005313"}]},"cv_name":"molecular_function","definition":"Enables the transfer of acidic amino acids from one side of a membrane to the other. Acidic amino acids have side chains with a negative charge at pH 7.3.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00626":null,"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"acidic amino acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-372448"],"synonyms":[{"name":"acidic amino acid transporter activity","type":"broad"}],"termid":"GO:0015172","terms_by_termid":{"GO:0005313":null,"GO:0015183":null}}


id: FYPO:0007047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alkaline phosphatase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phosphatase activity","termid":"FYPO:0004469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal alkaline phosphatase activity","termid":"FYPO:0007047"}


id: GO:2000577
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ATP-dependent microtubule motor activity, minus-end-directed.","definition_xrefs":["GOC:kmv","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of microtubule motor activity, minus-end-directed (obsolete GO:2000577)","synonyms":[{"name":"regulation of ATP-dependent microtubule motor activity, minus-end-directed","type":"exact"},{"name":"regulation of kinesin ATP phosphohydrolase (minus-end-directed)","type":"exact"},{"name":"regulation of minus-end-directed kinesin ATPase activity","type":"related"},{"name":"regulation of minus-end-directed microtubule motor activity","type":"broad"}],"termid":"GO:2000577"}


id: GO:0047780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: citrate = cis-aconitate + H2O.","definition_xrefs":["EC:4.2.1.3"],"gene_count":0,"genotype_count":0,"name":"obsolete citrate dehydratase activity (obsolete GO:0047780)","synonyms":[{"name":"aconitate hydratase activity","type":"broad"},{"name":"citrate hydro-lyase (cis-aconitate-forming)","type":"related"},{"name":"citrate hydro-lyase (cis-aconitate-forming) activity","type":"exact"},{"name":"citrate hydro-lyase activity","type":"broad"}],"termid":"GO:0047780"}


id: GO:0001861
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the C4b product of the classical complement cascade and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opsonin receptor activity","termid":"GO:0001847"},{"relation_name":"is_a","term_name":"complement receptor activity","termid":"GO:0004875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"complement component C4b receptor activity","termid":"GO:0001861"}


id: PBO:0000674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner centromere protein, CENP-I ortholog Mis6","termid":"PBO:0000674"}


id: PBO:0003586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial FAD transporter (predicted)","termid":"PBO:0003586"}


id: PBO:0039406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase promoting complex subunit 10","termid":"PBO:0039406"}


id: PBO:0038554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD17A pseudogene 9","termid":"PBO:0038554"}


id: GO:1990444
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an F-box domain of a protein.","definition_xrefs":["InterPro:IPR001810","GOC:bf","GOC:PARL","PMID:12628165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"F-box domain binding","termid":"GO:1990444"}


id: PBO:0050959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon lambda 2","termid":"PBO:0050959"}


id: PBO:0000906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom20 (predicted)","termid":"PBO:0000906"}


id: PBO:0038382
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_exposure_stressor","termid":"PBO:0038382"}


id: GO:0032692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-1 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-1 production","termid":"GO:0032652"},{"relation_name":"negatively_regulates","term_name":"interleukin-1 production","termid":"GO:0032612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-1 production","secondary_identifiers":["GO:0045361","GO:0050711"],"synonyms":[{"name":"down regulation of interleukin-1 production","type":"exact"},{"name":"down-regulation of interleukin-1 production","type":"exact"},{"name":"downregulation of interleukin-1 production","type":"exact"},{"name":"inhibition of interleukin-1 production","type":"narrow"},{"name":"negative regulation of IL-1 production","type":"exact"},{"name":"negative regulation of interleukin-1 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-1 secretion","type":"narrow"}],"termid":"GO:0032692"}


id: PBO:0004673
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperornithinemia","termid":"PBO:0004673"}


id: PBO:0086283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in 5'-end processing of mitochondrial RNAs; located in the mitochondrial membrane","termid":"PBO:0086283"}


id: PBO:0041691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcitonin receptor","termid":"PBO:0041691"}


id: MOD:01110
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an L-cysteine residue with a group derived from an isoprene polymer, such as a geranyl (C10), farnesyl (C15) or geranylgeranyl (C20).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenylated residue","termid":"MOD:00703"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoprenylated cysteine","synonyms":[{"name":"IpCys","type":"exact"}],"termid":"MOD:01110"}


id: PBO:0039774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 7","termid":"PBO:0039774"}


id: SO:0000724
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a DNA molecule where transfer is initiated during the process of conjugation or mobilization.","direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oriT","secondary_identifiers":["http://en.wikipedia.org/wiki/Origin_of_transfer"],"synonyms":[{"name":"INSDC_feature:oriT","type":"exact"},{"name":"origin of transfer","type":"exact"}],"termid":"SO:0000724"}


id: PBO:0043013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline kinase beta","termid":"PBO:0043013"}


id: GO:0048338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the mesoderm. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"mesoderm morphogenesis","termid":"GO:0048332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesoderm structural organization","synonyms":[{"name":"mesoderm structural organisation","type":"exact"}],"termid":"GO:0048338"}


id: GO:1900592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of violaceol II.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound catabolic process","termid":"GO:0019614"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"violaceol II metabolic process","termid":"GO:1900591"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"violaceol II catabolic process","synonyms":[{"name":"violaceol II breakdown","type":"exact"},{"name":"violaceol II catabolism","type":"exact"},{"name":"violaceol II degradation","type":"exact"}],"termid":"GO:1900592"}


id: GO:0051210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell irreversibly increases in size uniformly in all directions. In general, a rounded cell morphology reflects isotropic cell growth.","definition_xrefs":["GOC:ai","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell growth","termid":"GO:0016049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"isotropic cell growth","synonyms":[{"name":"uniform cell growth","type":"related"}],"termid":"GO:0051210"}


id: PBO:0074863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 49A","termid":"PBO:0074863"}


id: PATO:0000627
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern quality inhering in a bearer by virtue of the bearer's being confined or restricted to a particular location.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"localized","synonyms":[{"name":"focal","type":"exact"},{"name":"localised","type":"exact"}],"termid":"PATO:0000627"}


id: FYPO:0002886
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a normal (i.e. indistinguishable from wild type) extent during a cellular response to heavy metal stress. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transcription during vegetative growth","termid":"FYPO:0001855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0000294"],"is_obsolete":false,"name":"normal transcription during cellular response to heavy metal stress","synonyms":[{"name":"normal transcription during cellular response to heavy metal stress during mitotic cell cycle","type":"related"},{"name":"normal transcription during cellular response to heavy metal stress during vegetative growth","type":"exact"},{"name":"normal transcription in response to heavy metal stress","type":"exact"}],"termid":"FYPO:0002886"}


id: GO:0097567
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Set of four basal bodies found in Giardia species (trophozoite stage). It comprises the right lateral basal body pair and the right middle basal body pair (i.e. the anterior, ventral, caudal and posteriolateral basal bodies located to the left of the right nucleus of the trophozoite when viewed dorsally).","definition_xrefs":["GOC:giardia","ISBN:9780124260207","PMID:16607022","PMID:5961344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"right tetrad","termid":"GO:0097567"}


id: PBO:0077506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 223","termid":"PBO:0077506"}


id: PBO:0041179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin subfamily 3 member A1","termid":"PBO:0041179"}


id: PBO:0040333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 1 pseudogene 8","termid":"PBO:0040333"}


id: GO:0015175
data:
  {"annotated_genes":["SJAG_04295","SJAG_04718","SJAG_00626","SJAG_04984","SJAG_04637","SJAG_02029","SJAG_04725"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109759,115076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033229"},{"annotations":[94290,96304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015187"},{"annotations":[98868,106076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015182"},{"annotations":[106077,98869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015188"},{"annotations":[97273,96416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015193"}]},"cv_name":"molecular_function","definition":"Enables the transfer of neutral L-amino acids from one side of a membrane to the other. Neutral amino acids have side chains with no charge at pH 7.3.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00626":null,"SJAG_02029":null,"SJAG_04295":null,"SJAG_04637":null,"SJAG_04718":null,"SJAG_04725":null,"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"neutral L-amino acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"neutral amino acid transmembrane transporter activity","type":"exact"},{"name":"neutral amino acid transporter activity","type":"broad"}],"termid":"GO:0015175","terms_by_termid":{"GO:0015182":null,"GO:0015187":null,"GO:0015188":null,"GO:0015193":null,"GO:0033229":null}}


id: GO:0099109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a G protein-coupled receptor binding to its physiological ligand, where the pathway proceeds activation of a potassium ion channel.","definition_xrefs":["PMID:9429760","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ion channel modulating, G protein-coupled receptor signaling pathway","termid":"GO:0099105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"potassium channel activating, G protein-coupled receptor signaling pathway","synonyms":[{"name":"potassium channel activating, G-protein coupled receptor signaling pathway","type":"exact"}],"termid":"GO:0099109"}


id: PR:P87015
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC186.03 gene.","definition_xrefs":["UniProtKB:P87015","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-asparaginase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC186.03","synonyms":[{"name":"L-asparagine amidohydrolase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC186.03","type":"exact"}],"termid":"PR:P87015"}


id: PBO:0051960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPRID2 divergent transcript","termid":"PBO:0051960"}


id: GO:0051840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of cytolysis by that organism of cells in its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of cytolysis of symbiont cells (obsolete GO:0051840)","synonyms":[{"name":"down regulation by host of cytolysis of symbiont cells","type":"exact"},{"name":"down-regulation by host of cytolysis of symbiont cells","type":"exact"},{"name":"downregulation by host of cytolysis of symbiont cells","type":"exact"},{"name":"inhibition by host of cytolysis of symbiont cells","type":"narrow"}],"termid":"GO:0051840"}


id: PBO:0074710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 74B","termid":"PBO:0074710"}


id: PBO:0072019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8 pseudogene 6","termid":"PBO:0072019"}


id: GO:0140474
data:
  {"annotated_genes":["SJAG_04370","SJAG_01305","SJAG_03416","SJAG_03710"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86962,101895,103578,103707],"is_not":false,"summary":null,"term":"GO:0140474"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a mitochondrion and an ER membrane either via membrane lipid binding or by interacting with a mitochondrial outer membrane protein, to establish or maintain the localization of the mitochondrion.","definition_xrefs":["PMID:19556461","PMID:27875684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum-organelle membrane tether activity","termid":"GO:0170009"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01305":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_04370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0003674","GO:0030674","GO:0060090"],"is_obsolete":false,"name":"mitochondrion-endoplasmic reticulum membrane tether activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER-mitochondrion membrane adaptor activity","type":"exact"},{"name":"ER-mitochondrion membrane tether activity","type":"exact"},{"name":"endoplasmic reticulum-mitochondrion membrane adaptor activity","type":"exact"},{"name":"endoplasmic reticulum-mitochondrion membrane tether activity","type":"exact"},{"name":"mitochondrion-ER membrane adaptor activity","type":"exact"},{"name":"mitochondrion-ER membrane tether activity","type":"exact"},{"name":"mitochondrion-endoplasmic reticulum membrane adaptor activity","type":"exact"}],"termid":"GO:0140474","terms_by_termid":{"GO:0140474":null}}


id: PBO:0085961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overexpression confers resistance to the antimicrobial peptide MiAMP1 and causes growth arrest, apoptosis, and increased sensitivity to cobalt chloride","termid":"PBO:0085961"}


id: PBO:0044661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defective in cullin neddylation 1 domain containing 3","termid":"PBO:0044661"}


id: PBO:0045716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F3 intronic transcript 1","termid":"PBO:0045716"}


id: PBO:0075320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase 1 pseudogene 2","termid":"PBO:0075320"}


id: PBO:0090519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroporphyrinogen decarboxylase Hem12","termid":"PBO:0090519"}


id: GO:0008549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate. An enzyme that is involved in endocytosis and is instrumental in pinching off membrane vesicles.","definition_xrefs":["EC:3.6.5.5","MetaCyc:3.6.1.50-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete dynamin GTPase activity (obsolete GO:0008549)","synonyms":[{"name":"dynamin GTPase activity","type":"exact"},{"name":"dynamine GTPase activity","type":"exact"}],"termid":"GO:0008549"}


id: PBO:0067571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 726, pseudogene","termid":"PBO:0067571"}


id: PATO:0002144
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A radiopacity that is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"radiopacity","termid":"PATO:0002136"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased radiopacity","termid":"PATO:0002144"}


id: GO:2000901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a cyclodextrin.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide catabolic process","termid":"GO:0009313"},{"relation_name":"is_a","term_name":"dextrin catabolic process","termid":"GO:1901027"},{"relation_name":"is_a","term_name":"cyclodextrin metabolic process","termid":"GO:2000900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"cyclodextrin catabolic process","synonyms":[{"name":"cyclodextrin catabolism","type":"exact"}],"termid":"GO:2000901"}


id: PBO:0067466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 594, pseudogene","termid":"PBO:0067466"}


id: GO:0140663
data:
  {"annotated_genes":["SJAG_02895","SJAG_02994"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94996,96098],"is_not":false,"summary":null,"term":"GO:0140663"}]},"cv_name":"molecular_function","definition":"Binding to and delivering metal ions to a target protein, driven by ATP hydrolysis.","definition_xrefs":["PMID:16843540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallochaperone activity","termid":"GO:0016530"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02895":null,"SJAG_02994":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140104"],"is_obsolete":false,"name":"ATP-dependent FeS chaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140663","terms_by_termid":{"GO:0140663":null}}


id: GO:0075137
data:
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