# terms

id: PBO:0013081
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement E. coli hisG","termid":"PBO:0013081"}


id: PBO:0049614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 17","termid":"PBO:0049614"}


id: GO:0060418
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Discrete structures that partition the water-soluble portion of the yolk of oocytes and ova, which may or may not be membrane enclosed.","definition_xrefs":["GOC:tb","GOC:dph","PMID:18046696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"yolk","termid":"GO:0060417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"yolk plasma","termid":"GO:0060418"}


id: PBO:0074242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 52 member 2","termid":"PBO:0074242"}


id: PBO:0111913
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kip3 subfamily","termid":"PBO:0111913"}


id: PBO:0071237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 78","termid":"PBO:0071237"}


id: PBO:0005152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase regulator Vps3 (predicted)","termid":"PBO:0005152"}


id: PBO:0089904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ThiJ domain protein, implicated in cellular detoxification","termid":"PBO:0089904"}


id: GO:0089721
data:
  {"annotated_genes":["SJAG_00276","SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89393,108322],"is_not":false,"summary":null,"term":"GO:0089721"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a phosphoenolpyruvate from one side of a membrane to the other.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"phosphoenolpyruvate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0089721","terms_by_termid":{"GO:0089721":null}}


id: PBO:0054568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1970","termid":"PBO:0054568"}


id: PBO:0049188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRHL3 antisense RNA 1","termid":"PBO:0049188"}


id: PBO:0027365
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_stubby_mononucleate_vegetative_cell","termid":"PBO:0027365"}


id: PBO:0079063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon TAC) 3-1","termid":"PBO:0079063"}


id: PBO:0081529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 439","termid":"PBO:0081529"}


id: GO:0039671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process by which a virus avoids the effects mediated by the host organism's natural killer (NK) cells.","definition_xrefs":["GOC:jl","PMID:15640804","PMID:18688275","GOC:bf","UniProtKB-KW:KW-1131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virus-mediated perturbation of host defense response","termid":"GO:0019049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"evasion by virus of host natural killer cell activity","synonyms":[{"name":"evasion by virus of host NK cell killing","type":"exact"},{"name":"evasion by virus of host natural killer cell response","type":"exact"},{"name":"modulation of host NK-cell activity by virus","type":"related"},{"name":"protection by virus against host NK cell cytotoxicity","type":"exact"},{"name":"suppression by virus of host natural killer cell function","type":"exact"},{"name":"viral immunoevasion of host NK cell","type":"exact"}],"termid":"GO:0039671"}


id: GO:1904784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a NLRP1 inflammasome complex.","definition_xrefs":["PMID:19124602","GO_REF:0000079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical inflammasome complex assembly","termid":"GO:0140632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0065003","GO:0023052","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"NLRP1 inflammasome complex assembly","synonyms":[{"name":"NALP1 inflammasome complex assembly","type":"exact"},{"name":"NALP1 inflammasome complex formation","type":"exact"},{"name":"NLRP1 inflammasome complex formation","type":"exact"}],"termid":"GO:1904784"}


id: GO:0043474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a pigment, any general or particular coloring matter in living organisms, resulting in the deposition or aggregation of pigment in an organism, tissue or cell.","definition_xrefs":["GOC:tb","GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment metabolic process","termid":"GO:0042440"},{"relation_name":"part_of","term_name":"pigmentation","termid":"GO:0043473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment metabolic process involved in pigmentation","synonyms":[{"name":"pigment metabolic process during pigmentation","type":"related"},{"name":"pigment metabolism during pigmentation","type":"related"}],"termid":"GO:0043474"}


id: PBO:0027938
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glucose_consumption","termid":"PBO:0027938"}


id: FYPO:0001797
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which translation is abnormal. Translation is the synthesis of a protein using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain.","definition_xrefs":["PomBase:mah","GO:0006412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation phenotype","termid":"FYPO:0000291"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal translation","synonyms":[{"name":"abnormal protein biosynthesis","type":"exact"},{"name":"abnormal protein synthesis","type":"exact"},{"name":"abnormal translation during mitotic cell cycle","type":"related"},{"name":"abnormal translation during vegetative growth","type":"exact"}],"termid":"FYPO:0001797"}


id: PBO:0073160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC61G pseudogene 1","termid":"PBO:0073160"}


id: PBO:0055744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMX1B divergent transcript","termid":"PBO:0055744"}


id: PBO:0078978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon GCT) 4-3","termid":"PBO:0078978"}


id: PBO:0046737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonuclease 3'-5' domain containing 3","termid":"PBO:0046737"}


id: PATO:0001439
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A contractile quality inhering in a bearer by virtue of the bearer's elastic tension that facilitate response to stimuli.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contractility","termid":"PATO:0001579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tonicity","secondary_identifiers":["PATO:0001498"],"synonyms":[{"name":"tone","type":"exact"}],"termid":"PATO:0001439"}


id: FYPO:0006622
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of binding to double-stranded DNA containing a G/T mispair by a gene product is decreased, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased double-stranded DNA binding","termid":"FYPO:0005018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000653","FYPO:0000652"],"is_obsolete":false,"name":"decreased T-G mismatch DNA binding","synonyms":[{"name":"decreased G/T mispair binding","type":"exact"},{"name":"decreased T/G mispair binding","type":"exact"},{"name":"decreased guanine/thymine mispair binding","type":"exact"},{"name":"decreased thymine/guanine mispair binding","type":"exact"},{"name":"reduced T-G mismatch DNA binding","type":"exact"}],"termid":"FYPO:0006622"}


id: PBO:0069656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 933, pseudogene","termid":"PBO:0069656"}


id: PBO:0060506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAP1L5 pseudogene 1","termid":"PBO:0060506"}


id: GO:0043021
data:
  {"annotated_genes":["SJAG_03012","SJAG_04874","SJAG_00231","SJAG_01567","SJAG_02856","SJAG_01117","SJAG_02189","SJAG_02330","SJAG_01840","SJAG_02746","SJAG_03788","SJAG_03629","SJAG_05000","SJAG_05332","SJAG_04635","SJAG_02061","SJAG_00681","SJAG_02171","SJAG_02208","SJAG_03291","SJAG_01176","SJAG_03094","SJAG_01759","SJAG_04351","SJAG_00188","SJAG_01438","SJAG_00360","SJAG_03232","SJAG_04599","SJAG_03882","SJAG_01917","SJAG_01074","SJAG_01806","SJAG_03658","SJAG_02812","SJAG_04560","SJAG_01558","SJAG_03841","SJAG_03548","SJAG_00750","SJAG_02279","SJAG_02558","SJAG_02026","SJAG_04914"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062064"},{"annotations":[98692,88034,101639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097177"},{"annotations":[100349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990275"},{"annotations":[91291,110477,84450,102920,85848,100757,112241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043023"},{"annotations":[95509,99599,103071,99468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043024"},{"annotations":[84865,94366,89873,101141,105218,94367,108728,91184,113407,95510,106673,105217,102218,105390,113714,93301,108916,97350,112725,110072,91185,87361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043022"},{"annotations":[111202,85732,105810,90341,105617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005047"},{"annotations":[90987,83508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070990"},{"annotations":[109926,87849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990446"},{"annotations":[109927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990447"}]},"cv_name":"molecular_function","definition":"Binding to a complex of RNA and protein.","definition_xrefs":["GOC:bf","GOC:go_curators","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00188":null,"SJAG_00231":null,"SJAG_00360":null,"SJAG_00681":null,"SJAG_00750":null,"SJAG_01074":null,"SJAG_01117":null,"SJAG_01176":null,"SJAG_01438":null,"SJAG_01558":null,"SJAG_01567":null,"SJAG_01759":null,"SJAG_01806":null,"SJAG_01840":null,"SJAG_01917":null,"SJAG_02026":null,"SJAG_02061":null,"SJAG_02171":null,"SJAG_02189":null,"SJAG_02208":null,"SJAG_02279":null,"SJAG_02330":null,"SJAG_02558":null,"SJAG_02746":null,"SJAG_02812":null,"SJAG_02856":null,"SJAG_03012":null,"SJAG_03094":null,"SJAG_03232":null,"SJAG_03291":null,"SJAG_03548":null,"SJAG_03629":null,"SJAG_03658":null,"SJAG_03788":null,"SJAG_03841":null,"SJAG_03882":null,"SJAG_04351":null,"SJAG_04560":null,"SJAG_04599":null,"SJAG_04635":null,"SJAG_04874":null,"SJAG_04914":null,"SJAG_05000":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ribonucleoprotein complex binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNP binding","type":"exact"},{"name":"protein-RNA complex binding","type":"exact"},{"name":"ribonucleoprotein binding","type":"exact"}],"termid":"GO:0043021","terms_by_termid":{"GO:0005047":null,"GO:0043022":null,"GO:0043023":null,"GO:0043024":null,"GO:0062064":null,"GO:0070990":null,"GO:0097177":null,"GO:1990275":null,"GO:1990446":null,"GO:1990447":null}}


id: SO:0000809
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cDNA clone that is invalid.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"invalidated","termid":"SO:0000790"},{"relation_name":"is_a","term_name":"cDNA_clone","termid":"SO:0000317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invalidated_cDNA_clone","synonyms":[{"name":"invalidated cDNA clone","type":"exact"}],"termid":"SO:0000809"}


id: PBO:0071876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 14","termid":"PBO:0071876"}


id: FYECO:0000091
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cisplatin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ cisplatin","termid":"FYECO:0000091"}


id: PBO:0091424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Class II alpha-mannosidase, subtype C, Ams1","termid":"PBO:0091424"}


id: GO:0070383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of an amino group from a cytosine residue in DNA, forming a uracil residue.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA deamination","termid":"GO:0045006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"DNA cytosine deamination","termid":"GO:0070383"}


id: PBO:0000203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrimidine 5'-nucleotidase (predicted)","termid":"PBO:0000203"}


id: PBO:0052165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 13","termid":"PBO:0052165"}


id: PR:O42858
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A retinoblastoma-binding protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01043","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"set1 complex component swd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.05c","secondary_identifiers":["UniProtKB:O42858"],"synonyms":[{"name":"COMPASS component swd1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Set1C component swd1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RBBP5","type":"exact"},{"name":"complex proteins associated with set1 protein swd1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42858"}


id: FYPO:0000516
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear import is normal (i.e. indistinguishable from wild type). Nuclear import is the directed movement of any substance into the nucleus; import of all substances or a specific substance may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nucleocytoplasmic transport","termid":"FYPO:0008138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal nuclear import","synonyms":[{"name":"normal nuclear import during mitotic cell cycle","type":"related"},{"name":"normal nuclear import during vegetative growth","type":"exact"},{"name":"nuclear import: normal","type":"related"}],"termid":"FYPO:0000516"}


id: FYPO:0003637
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of ADP binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abnormal ADP binding","termid":"FYPO:0003637"}


id: RO:0002578
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Process(P1) directly regulates process(P2) iff: P1 regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2).  For example, if protein A has protein binding activity(P1) that targets protein B and this binding  regulates the kinase activity (P2) of protein B then P1 directly regulates P2.","direct_ancestors":[{"relation_name":"is_a","term_name":"regulates","termid":"RO:0002211"},{"relation_name":"is_a","term_name":"immediately_causally_upstream_of","termid":"RO:0002412"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_regulates","termid":"RO:0002578"}


id: GO:0052410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving chitin in the cell wall of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont cell wall chitin (obsolete GO:0052410)","termid":"GO:0052410"}


id: GO:0005602
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of six subunits of C1q, each formed of the three homologous polypeptide chains C1QA, C1QB, and C1QB, and tetramer of two C1QR and two C1QS polypeptide chains.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005576","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"complement component C1 complex","synonyms":[{"name":"complement component C1q complex","type":"narrow"}],"termid":"GO:0005602"}


id: GO:1904843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitroglycerin stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:25626975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to nitroglycerin","termid":"GO:1904842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nitroglycerin","synonyms":[{"name":"cellular response to nitroglycerine","type":"exact"},{"name":"cellular response to nitroglycerol","type":"exact"},{"name":"cellular response to trinitroglycerin","type":"exact"},{"name":"cellular response to trinitroglycerol","type":"exact"}],"termid":"GO:1904843"}


id: FYPO:0005967
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of potassium ions into a cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal potassium import","termid":"FYPO:0005966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased potassium import","synonyms":[{"name":"decreased cellular potassium import","type":"exact"},{"name":"decreased potassium import across plasma membrane","type":"exact"},{"name":"decreased potassium import during mitotic cell cycle","type":"related"},{"name":"decreased potassium import during vegetative growth","type":"exact"},{"name":"decreased potassium import into cell","type":"exact"},{"name":"decreased potassium ion import","type":"exact"},{"name":"reduced potassium import","type":"exact"}],"termid":"FYPO:0005967"}


id: PBO:0082493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic epsilon subunit of the translation initiation factor eIF2B; eIF2B is the guanine-nucleotide exchange factor for eIF2; activity subsequently regulated by phosphorylated eIF2; first identified as a negative regulator of GCN4 expression; mutations in human ortholog cause fatal brain disease childhood ataxia with central nervous system hypomyelination (CACH); forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0082493"}


id: SO:0001102
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the polypeptide molecule, interacts selectively and non-covalently with tungsten ions.","definition_xrefs":["EBIBS:GAR","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_metal_contact","termid":"SO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_tungsten_ion_contact_site","secondary_identifiers":["BS:00143"],"synonyms":[{"name":"W_contact_site","type":"exact"},{"name":"polypeptide tungsten ion contact site","type":"exact"}],"termid":"SO:0001102"}


id: PBO:0080610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 45B pseudogene 1","termid":"PBO:0080610"}


id: PBO:0051895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 4","termid":"PBO:0051895"}


id: GO:1904958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of midbrain dopaminergic neuron differentiation.","definition_xrefs":["PMID:21347250","GO_REF:0000058","GOC:bf","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of dopaminergic neuron differentiation","termid":"GO:1904340"},{"relation_name":"is_a","term_name":"regulation of midbrain dopaminergic neuron differentiation","termid":"GO:1904956"},{"relation_name":"positively_regulates","term_name":"midbrain dopaminergic neuron differentiation","termid":"GO:1904948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of midbrain dopaminergic neuron differentiation","synonyms":[{"name":"activation of DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of mDA neuron differentiation","type":"narrow"},{"name":"activation of midbrain DA neurogenesis","type":"narrow"},{"name":"activation of midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of midbrain dopaminergic neuron production","type":"narrow"},{"name":"positive regulation of DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"positive regulation of mDA neuron differentiation","type":"exact"},{"name":"positive regulation of midbrain DA neurogenesis","type":"exact"},{"name":"positive regulation of midbrain dopaminergic neuron production","type":"exact"},{"name":"up regulation of DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up regulation of mDA neuron differentiation","type":"exact"},{"name":"up regulation of midbrain DA neurogenesis","type":"exact"},{"name":"up regulation of midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up regulation of midbrain dopaminergic neuron production","type":"exact"},{"name":"up-regulation of DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up-regulation of mDA neuron differentiation","type":"exact"},{"name":"up-regulation of midbrain DA neurogenesis","type":"exact"},{"name":"up-regulation of midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up-regulation of midbrain dopaminergic neuron production","type":"exact"},{"name":"upregulation of DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"upregulation of mDA neuron differentiation","type":"exact"},{"name":"upregulation of midbrain DA neurogenesis","type":"exact"},{"name":"upregulation of midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"upregulation of midbrain dopaminergic neuron production","type":"exact"}],"termid":"GO:1904958"}


id: GO:0061001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of dendritic spine morphogenesis, the process in which the anatomical structures of a dendritic spine are generated and organized. A dendritic spine is a protrusion from a dendrite and a specialized subcellular compartment involved in synaptic transmission.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron projection development","termid":"GO:0010975"},{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"regulation of postsynapse organization","termid":"GO:0099175"},{"relation_name":"regulates","term_name":"dendritic spine morphogenesis","termid":"GO:0060997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dendritic spine morphogenesis","termid":"GO:0061001"}


id: PBO:0039807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 3","termid":"PBO:0039807"}


id: PBO:0054547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1947","termid":"PBO:0054547"}


id: PBO:0065198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 19","termid":"PBO:0065198"}


id: PBO:0061287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein 1 pseudogene 8","termid":"PBO:0061287"}


id: GO:0110131
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex that localizes to actin cortical patches at sites of endocytosis and negatively regulates barbed end F-actin assembly, resulting in the generation of free actin pools. The Aim21-Tda2 complex is necessary for efficient endocytosis and balancing the distribution of actin between patches and cables.","definition_xrefs":["PMID:28706108","GOC:rn","PMID:29467252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"actin cortical patch","termid":"GO:0030479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0030479"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575","GO:0030479","GO:0015629","GO:0005938"],"is_obsolete":false,"name":"Aim21-Tda2 complex","synonyms":[{"name":"Aim21/Tda2 complex","type":"exact"}],"termid":"GO:0110131"}


id: PBO:0053037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARGE xylosyl- and glucuronyltransferase 2","termid":"PBO:0053037"}


id: GO:0043546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a molybdopterin cofactor (Moco), essential for the catalytic activity of some enzymes, e.g. sulfite oxidase, xanthine dehydrogenase, and aldehyde oxidase. The cofactor consists of a mononuclear molybdenum (Mo-molybdopterin) or tungsten ion (W-molybdopterin) coordinated by one or two molybdopterin ligands.","definition_xrefs":["ISSN:09498257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"molybdopterin cofactor binding","synonyms":[{"name":"Moco binding","type":"exact"}],"termid":"GO:0043546"}


id: GO:0006518
data:
  {"annotated_genes":["SJAG_01430","SJAG_00792","SJAG_04031","SJAG_01351","SJAG_01004","SJAG_02599","SJAG_01088","SJAG_04032","SJAG_00469","SJAG_03494","SJAG_00988","SJAG_00181"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88352],"is_not":false,"summary":null,"term":"GO:0006518"},{"annotations":[90162],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043041"},{"annotations":[90164,90172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[114242,89360,104486,93082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006750"},{"annotations":[90119],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905569"},{"annotations":[101801,97103,110514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043171"},{"annotations":[101442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019290"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving peptides, compounds of two or more amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00181":null,"SJAG_00469":null,"SJAG_00792":null,"SJAG_00988":null,"SJAG_01004":null,"SJAG_01088":null,"SJAG_01351":null,"SJAG_01430":null,"SJAG_02599":null,"SJAG_03494":null,"SJAG_04031":null,"SJAG_04032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"peptide metabolism","type":"exact"}],"termid":"GO:0006518","terms_by_termid":{"GO:0006518":null,"GO:0006750":null,"GO:0019290":null,"GO:0031169":null,"GO:0043041":null,"GO:0043171":null,"GO:1905569":null}}


id: FYPO:0004262
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during G2 phase of the mitotic cell cycle and during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during cellular response to ionizing radiation","termid":"FYPO:0002471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0000002","FYPO:0002494","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein phosphorylation during mitotic G2 phase during cellular response to ionizing radiation","synonyms":[{"name":"abolished protein phosphorylation during cellular response to ionizing radiation during G2 phase of mitotic cell cycle","type":"exact"},{"name":"abolished protein phosphorylation during cellular response to ionizing radiation during mitotic G2 phase","type":"exact"},{"name":"abolished protein phosphorylation during mitotic G2 phase during cellular response to IR","type":"exact"},{"name":"abolished protein phosphorylation during mitotic G2 phase during cellular response to ionizing radiation during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during mitotic G2 phase during cellular response to ionizing radiation","type":"exact"}],"termid":"FYPO:0004262"}


id: GO:0015888
data:
  {"annotated_genes":["SJAG_02962","SJAG_03652","SJAG_04673","SJAG_00835"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99704],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[96737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"},{"annotations":[86205,86204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071934"}]},"cv_name":"biological_process","definition":"The directed movement of thiamine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Thiamine is vitamin B1, a water soluble vitamin present in fresh vegetables and meats, especially liver.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"vitamin transport","termid":"GO:0051180"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_04673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"thiamine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"thiamin transport","type":"exact"},{"name":"vitamin B1 transport","type":"exact"}],"termid":"GO:0015888","terms_by_termid":{"GO:0071934":null,"GO:0140125":null,"GO:1990545":null}}


id: PR:Q9P7A0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sgo1 gene.","definition_xrefs":["UniProtKB:Q9P7A0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shugoshin-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.03c","synonyms":[{"name":"Spom972h-sgo1","type":"exact"}],"termid":"PR:Q9P7A0"}


id: SO:0000071
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a gene when it is located within the intron of another gene and on the same strand.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inside_intron","termid":"SO:0000069"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inside_intron_parallel","synonyms":[{"name":"inside intron parallel","type":"exact"}],"termid":"SO:0000071"}


id: SO:0002350
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A fragile site considered part of the normal chromosomal structure.","direct_ancestors":[{"relation_name":"is_a","term_name":"fragile_site","termid":"SO:0002349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"common_fragile_site","termid":"SO:0002350"}


id: SO:0001967
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified DNA adenine base,at the 8 carbon, often the product of DNA damage.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenine","termid":"SO:0001962"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"8_oxoadenine","secondary_identifiers":["http:http\\://www.pacificbiosciences.com/pdf/WP_Detecting_DNA_Base_Modifications_Using_SMRT_Sequencing.pdf"],"synonyms":[{"name":"8-oxoA","type":"exact"},{"name":"8-oxoadenine","type":"exact"}],"termid":"SO:0001967"}


id: GO:0045022
data:
  {"annotated_genes":["SJAG_01309"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73677],"is_not":false,"summary":null,"term":"GO:0045022"}]},"cv_name":"biological_process","definition":"The directed movement of substances, in membrane-bounded vesicles, from the early sorting endosomes to the late sorting endosomes; transport occurs along microtubules and can be experimentally blocked with microtubule-depolymerizing drugs.","definition_xrefs":["ISBN:0815316194","PMID:29980602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport between endosomal compartments","termid":"GO:0098927"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"early endosome to late endosome transport","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"endosome maturation","type":"related"}],"termid":"GO:0045022","terms_by_termid":{"GO:0045022":null}}


id: PBO:0073877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 10 member 5","termid":"PBO:0073877"}


id: GO:0032102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a response to an external stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"negatively_regulates","term_name":"response to external stimulus","termid":"GO:0009605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to external stimulus","synonyms":[{"name":"down regulation of response to external stimulus","type":"exact"},{"name":"down-regulation of response to external stimulus","type":"exact"},{"name":"downregulation of response to external stimulus","type":"exact"},{"name":"inhibition of response to external stimulus","type":"narrow"}],"termid":"GO:0032102"}


id: PBO:0036410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bis(5'-adenosyl)-triphosphatase Nit1 (predicted)","termid":"PBO:0036410"}


id: PBO:0029456
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_leucine_import","termid":"PBO:0029456"}


id: GO:0031013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to troponin I, the inhibitory subunit of the troponin complex.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeletal protein binding","termid":"GO:0008092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0008092","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"troponin I binding","termid":"GO:0031013"}


id: GO:0046003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of progression through the syncytial blastoderm mitotic cell cycle.","definition_xrefs":["GOC:dph","GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of syncytial blastoderm mitotic cell cycle","termid":"GO:0007348"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle, embryonic","termid":"GO:0045976"},{"relation_name":"negatively_regulates","term_name":"syncytial blastoderm mitotic cell cycle","termid":"GO:0035186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of syncytial blastoderm mitotic cell cycle","synonyms":[{"name":"down regulation of progression through syncytial blastoderm mitotic cell cycle","type":"exact"},{"name":"down-regulation of progression through syncytial blastoderm mitotic cell cycle","type":"exact"},{"name":"downregulation of progression through syncytial blastoderm mitotic cell cycle","type":"exact"},{"name":"inhibition of progression through syncytial blastoderm mitotic cell cycle","type":"narrow"},{"name":"negative regulation of progression through syncytial blastoderm mitotic cell cycle","type":"exact"},{"name":"negative regulation of syncytial blastoderm cell cycle progression","type":"exact"}],"termid":"GO:0046003"}


id: PBO:0089689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar dipeptidyl peptidase","termid":"PBO:0089689"}


id: GO:0002589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antigen processing and presentation of peptide antigen via MHC class I.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002583"},{"relation_name":"regulates","term_name":"antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of antigen processing and presentation of peptide antigen via MHC class I","synonyms":[{"name":"regulation of peptide antigen processing and presentation via MHC class I","type":"exact"}],"termid":"GO:0002589"}


id: PBO:0075885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST6GAL2 intronic transcript 1","termid":"PBO:0075885"}


id: GO:2001211
data:
  {"annotated_genes":["SJAG_01187","SJAG_02380"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107433,111550],"is_not":false,"summary":null,"term":"GO:2001211"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of isopentenyl diphosphate biosynthetic process, mevalonate pathway.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid biosynthetic process","termid":"GO:0071072"},{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide metabolic process","termid":"GO:1900543"},{"relation_name":"is_a","term_name":"regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway","termid":"GO:2001210"},{"relation_name":"negatively_regulates","term_name":"isopentenyl diphosphate biosynthetic process, mevalonate pathway","termid":"GO:0019287"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_02380":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0006790","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"negative regulation of Ac-MVA pathway","type":"exact"},{"name":"negative regulation of acetate-mevalonate pathway","type":"exact"},{"name":"negative regulation of isopentenyl diphosphate anabolism, mevalonate pathway","type":"exact"},{"name":"negative regulation of isopentenyl diphosphate formation, mevalonate pathway","type":"exact"},{"name":"negative regulation of isopentenyl diphosphate synthesis, mevalonate pathway","type":"exact"}],"termid":"GO:2001211","terms_by_termid":{"GO:2001211":null}}


id: PBO:0091227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane fluoride export channel Fex1","termid":"PBO:0091227"}


id: PBO:0084886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial thioredoxin; highly conserved oxidoreductase required to maintain the redox homeostasis of the cell, forms the mitochondrial thioredoxin system with Trr2p, redox state is maintained by both Trr2p and Glr1p","termid":"PBO:0084886"}


id: FYPO:0001663
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of cyclic AMP measured in a cell is higher than normal when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular cAMP level","termid":"FYPO:0001661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular cAMP level during glucose starvation","synonyms":[{"name":"increased cAMP accumulation during cellular response to glucose starvation","type":"related"},{"name":"increased cellular cAMP level during glucose depletion","type":"exact"},{"name":"increased cellular cAMP level during glucose deprivation","type":"exact"},{"name":"increased cellular cAMP level during glucose limitation","type":"related"},{"name":"increased cellular cAMP level in response to glucose starvation","type":"exact"},{"name":"increased cellular cyclic AMP level and during cellular response to glucose starvation","type":"exact"}],"termid":"FYPO:0001663"}


id: GO:0043583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ear over time, from its formation to the mature structure. The ear is the sense organ in vertebrates that is specialized for the detection of sound, and the maintenance of balance. Includes the outer ear and middle ear, which collect and transmit sound waves; and the inner ear, which contains the organs of balance and (except in fish) hearing. Also includes the pinna, the visible part of the outer ear, present in some mammals.","definition_xrefs":["ISBN:0192801023","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ear development","synonyms":[{"name":"hearing organ development","type":"exact"}],"termid":"GO:0043583"}


id: PBO:0075766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/arginine repetitive matrix 5","termid":"PBO:0075766"}


id: PBO:0047072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 133 member A","termid":"PBO:0047072"}


id: GO:1905795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a puromycin stimulus.","definition_xrefs":["PMID:25736288","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to puromycin","termid":"GO:1905794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to puromycin","synonyms":[{"name":"cellular response to 3'-deoxy-N,N-dimethyl-3'-(O-methyl-L-tyrosinamido)adenosine","type":"exact"}],"termid":"GO:1905795"}


id: PBO:0053038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La ribonucleoprotein 1, translational regulator","termid":"PBO:0053038"}


id: PBO:0074015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 6 pseudogene 6","termid":"PBO:0074015"}


id: GO:0042414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving epinephrine, a hormone produced by the medulla of the adrenal glands that increases heart activity, improves the power and prolongs the action of muscles, and increases the rate and depth of breathing. It is synthesized by the methylation of norepinephrine.","definition_xrefs":["GOC:jl","ISBN:0198506732","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catecholamine metabolic process","termid":"GO:0006584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epinephrine metabolic process","synonyms":[{"name":"adrenaline metabolic process","type":"exact"},{"name":"adrenaline metabolism","type":"exact"},{"name":"epinephrine metabolism","type":"exact"}],"termid":"GO:0042414"}


id: GO:0050386
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-carbamoyl-L-aspartate + H2O + 2 H+ = L-aspartate + CO2 + NH4.","definition_xrefs":["EC:3.5.1.7","RHEA:14365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016810","GO:0016787"],"is_obsolete":false,"name":"ureidosuccinase activity","secondary_identifiers":["MetaCyc:UREIDOSUCCINASE-RXN","KEGG_REACTION:R00484"],"synonyms":[{"name":"N-carbamoyl-L-aspartate amidohydrolase activity","type":"related"}],"termid":"GO:0050386"}


id: GO:0014805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which smooth muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors. These adaptive events occur in both muscle fibers and associated structures (motoneurons and capillaries), and they involve alterations in regulatory mechanisms, contractile properties and metabolic capacities.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle adaptation","termid":"GO:0043500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle adaptation","synonyms":[{"name":"smooth muscle plasticity","type":"related"}],"termid":"GO:0014805"}


id: PBO:0070280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 21","termid":"PBO:0070280"}


id: PBO:0082043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hexaprenyl-6-methoxy-1,4-benzoquinone methyltransferase; involved in ubiquinone (Coenzyme Q) biosynthesis; localizes to the matrix face of the mitochondrial inner membrane in a large complex with other ubiquinone biosynthetic enzymes; respiratory defect of the null mutant is partially complemented by human COQ5","termid":"PBO:0082043"}


id: GO:0098537
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Nucleus with two or more lobes connected by a thin filament that contains no internal chromatin. Examples include the nuclei of mature basophils, eosinophils and neutrophils in mice and humans.","definition_xrefs":["GOC:dos","GOC:tfm"],"gene_count":0,"genotype_count":0,"name":"obsolete lobed nucleus (obsolete GO:0098537)","termid":"GO:0098537"}


id: PBO:0076343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 10","termid":"PBO:0076343"}


id: GO:0046481
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-diacyl-3-beta-D-galactosyl-sn-glycerol + UDP-D-galactose = 3-[alpha-D-galactosyl-(1->6)-beta-D-galactosyl]-1,2-diacyl-sn-glycerol + H+ + UDP.","definition_xrefs":["EC:2.4.1.241","RHEA:10520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"digalactosyldiacylglycerol synthase activity","secondary_identifiers":["KEGG_REACTION:R04469","MetaCyc:RXN-1225","Wikipedia:Digalactosyldiacylglycerol_synthase"],"synonyms":[{"name":"DGD1","type":"narrow"},{"name":"DGD2","type":"narrow"},{"name":"DGDG synthase activity","type":"broad"},{"name":"UDP-galactose-dependent DGDG synthase activity","type":"related"},{"name":"UDP-galactose-dependent digalactosyldiacylglycerol synthase activity","type":"related"},{"name":"UDP-galactose:3-(beta-D-galactosyl)-1,2-diacyl-sn-glycerol 6-alpha-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:MGDG galactosyltransferase activity","type":"exact"}],"termid":"GO:0046481"}


id: PBO:0027232
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_following_cellular_response_to_hydroxyurea","termid":"PBO:0027232"}


id: PBO:0030834
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_5-phosphoribosyl_diphosphate_level","termid":"PBO:0030834"}


id: PR:O14194
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ggt2 gene.","definition_xrefs":["UniProtKB:O14194","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltranspeptidase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56E4.06c","synonyms":[{"name":"Spom972h-ggt2","type":"exact"},{"name":"gamma-glutamyltransferase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glutathione hydrolase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14194"}


id: GO:0071406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methylmercury stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to methylmercury","termid":"GO:0051597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to methylmercury","synonyms":[{"name":"cellular response to CH3-Hg+","type":"exact"},{"name":"cellular response to MeHg+","type":"exact"}],"termid":"GO:0071406"}


id: PBO:0058684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6812","termid":"PBO:0058684"}


id: PBO:0015690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-PARP type zinc finger protein, G1-S transition regulator Hpz1","termid":"PBO:0015690"}


id: GO:0033695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH2 group acts as a hydrogen or electron donor and reduces a quinone or similar acceptor molecule.","definition_xrefs":["GOC:mah","EC:1.17.5.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups","termid":"GO:0016725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor","termid":"GO:0033695"}


id: PBO:0015673
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by human EIF3I","termid":"PBO:0015673"}


id: GO:1903814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of collecting lymphatic vessel constriction.","definition_xrefs":["GO_REF:0000058","PMID:23897233","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"is_a","term_name":"regulation of anatomical structure size","termid":"GO:0090066"},{"relation_name":"regulates","term_name":"collecting lymphatic vessel constriction","termid":"GO:1990192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of collecting lymphatic vessel constriction","synonyms":[{"name":"regulation of lymphatic vessel myogenic constriction","type":"exact"}],"termid":"GO:1903814"}


id: PBO:0088037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin conjugating enzyme; involved in the ER-associated protein degradation (ERAD) pathway and in the inner nuclear membrane-associated degradation (INMAD) pathway; requires Cue1p for recruitment to the ER membrane; proposed to be involved in chromatin assembly","termid":"PBO:0088037"}


id: PBO:0068379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 180","termid":"PBO:0068379"}


id: PATO:0001599
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An oriented quality inhering in a bearer by virtue of the bearer's being relocated around an axis.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oriented","termid":"PATO:0000614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rotated","synonyms":[{"name":"rotation","type":"exact"}],"termid":"PATO:0001599"}


id: GO:1902457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of stomatal opening.","definition_xrefs":["GOC:TermGenie","PMID:23766366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of stomatal opening","termid":"GO:1902456"},{"relation_name":"negatively_regulates","term_name":"stomatal opening","termid":"GO:1990069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of stomatal opening","synonyms":[{"name":"down regulation of stomatal opening","type":"exact"},{"name":"down-regulation of stomatal opening","type":"exact"},{"name":"downregulation of stomatal opening","type":"exact"},{"name":"inhibition of stomatal opening","type":"narrow"}],"termid":"GO:1902457"}


id: PBO:0004713
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tel Two Interacting protein","termid":"PBO:0004713"}


id: GO:0001846
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an opsonin, such as a complement component or antibody, deposited on the surface of a bacteria, virus, immune complex, or other particulate material.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"opsonin binding","termid":"GO:0001846"}


id: GO:0009432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An error-prone process for repairing damaged microbial DNA.","definition_xrefs":["GOC:jl","PMID:16000023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA damage response","termid":"GO:0006974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"SOS response","secondary_identifiers":["Wikipedia:SOS_response"],"termid":"GO:0009432"}


id: GO:1902326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chlorophyll biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:23555952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chlorophyll biosynthetic process","termid":"GO:0010380"},{"relation_name":"is_a","term_name":"positive regulation of tetrapyrrole biosynthetic process","termid":"GO:1901465"},{"relation_name":"positively_regulates","term_name":"chlorophyll biosynthetic process","termid":"GO:0015995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0033013"},{"rel_name":"regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"positive regulation of chlorophyll biosynthetic process","synonyms":[{"name":"activation of chlorophyll anabolism","type":"narrow"},{"name":"activation of chlorophyll biosynthesis","type":"narrow"},{"name":"activation of chlorophyll biosynthetic process","type":"narrow"},{"name":"activation of chlorophyll formation","type":"narrow"},{"name":"activation of chlorophyll synthesis","type":"narrow"},{"name":"positive regulation of chlorophyll anabolism","type":"exact"},{"name":"positive regulation of chlorophyll biosynthesis","type":"exact"},{"name":"positive regulation of chlorophyll formation","type":"exact"},{"name":"positive regulation of chlorophyll synthesis","type":"exact"},{"name":"up regulation of chlorophyll anabolism","type":"exact"},{"name":"up regulation of chlorophyll biosynthesis","type":"exact"},{"name":"up regulation of chlorophyll biosynthetic process","type":"exact"},{"name":"up regulation of chlorophyll formation","type":"exact"},{"name":"up regulation of chlorophyll synthesis","type":"exact"},{"name":"up-regulation of chlorophyll anabolism","type":"exact"},{"name":"up-regulation of chlorophyll biosynthesis","type":"exact"},{"name":"up-regulation of chlorophyll biosynthetic process","type":"exact"},{"name":"up-regulation of chlorophyll formation","type":"exact"},{"name":"up-regulation of chlorophyll synthesis","type":"exact"},{"name":"upregulation of chlorophyll anabolism","type":"exact"},{"name":"upregulation of chlorophyll biosynthesis","type":"exact"},{"name":"upregulation of chlorophyll biosynthetic process","type":"exact"},{"name":"upregulation of chlorophyll formation","type":"exact"},{"name":"upregulation of chlorophyll synthesis","type":"exact"}],"termid":"GO:1902326"}


id: PBO:0086886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transcription factor, contains Forkhead Associated domain; found associated with chromatin; target of SBF transcription factor; induced in response to DNA damaging agents and deletion of telomerase; PLM2 has a paralog, TOS4, that arose from the whole genome duplication","termid":"PBO:0086886"}


id: PBO:0042945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 1","termid":"PBO:0042945"}


id: GO:0047079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxyuridine + 2-oxoglutarate + O2 = 2-deoxy-D-ribono-1,4-lactone + CO2 + succinate + uracil.","definition_xrefs":["EC:1.14.11.10","RHEA:23316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"deoxyuridine 1'-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R02486","MetaCyc:1.14.11.10-RXN"],"synonyms":[{"name":"2'-deoxyuridine,2-oxoglutarate:oxygen oxidoreductase (1'-hydroxylating)","type":"related"},{"name":"pyrimidine-deoxynucleoside 1'-dioxygenase activity","type":"broad"},{"name":"pyrimidine-deoxynucleoside,2-oxoglutarate 1'-dioxygenase activity","type":"broad"}],"termid":"GO:0047079"}


id: MOD:01372
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to a (2S)-4-hydroxyleucine.","definition_xrefs":["ChEBI:141825","PubMed:363352","PubMed:9164839","RESID:AA0442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated leucine","termid":"MOD:01411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S)-4-hydroxyleucine","synonyms":[{"name":"(2S)-2-amino-4-hydroxy-4-methylpentanoic acid","type":"exact"},{"name":"(2S)-4-hydroxyleucine","type":"exact"},{"name":"MOD_RES (2S)-4-hydroxyleucine","type":"exact"},{"name":"gamma-hydroxyleucine","type":"exact"}],"termid":"MOD:01372"}


id: PBO:0001498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase, calcium transporting (predicted)","termid":"PBO:0001498"}


id: PBO:0088226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neddylation protein Dcn1","termid":"PBO:0088226"}


id: PBO:0084768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial NADP-specific isocitrate dehydrogenase; catalyzes the oxidation of isocitrate to alpha-ketoglutarate; not required for mitochondrial respiration and may function to divert alpha-ketoglutarate to biosynthetic processes","termid":"PBO:0084768"}


id: PBO:0055698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LLGL scribble cell polarity complex component 1","termid":"PBO:0055698"}


id: GO:1904513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of initiation of premeiotic DNA replication.","definition_xrefs":["PMID:25891897","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated DNA replication initiation","termid":"GO:0032297"},{"relation_name":"is_a","term_name":"negative regulation of meiotic cell cycle","termid":"GO:0051447"},{"relation_name":"is_a","term_name":"negative regulation of nuclear cell cycle DNA replication","termid":"GO:1902576"},{"relation_name":"is_a","term_name":"regulation of initiation of premeiotic DNA replication","termid":"GO:1904512"},{"relation_name":"negatively_regulates","term_name":"meiotic DNA replication initiation","termid":"GO:1902974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006260","GO:0007049"],"is_obsolete":false,"name":"negative regulation of initiation of premeiotic DNA replication","synonyms":[{"name":"down regulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"down regulation of initiation of premeiotic DNA replication","type":"exact"},{"name":"down regulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"down regulation of meiotic DNA replication initiation","type":"related"},{"name":"down regulation of premeiotic DNA replication initiation","type":"exact"},{"name":"down-regulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"down-regulation of initiation of premeiotic DNA replication","type":"exact"},{"name":"down-regulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"down-regulation of meiotic DNA replication initiation","type":"related"},{"name":"down-regulation of premeiotic DNA replication initiation","type":"exact"},{"name":"downregulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"downregulation of initiation of premeiotic DNA replication","type":"exact"},{"name":"downregulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"downregulation of meiotic DNA replication initiation","type":"related"},{"name":"downregulation of premeiotic DNA replication initiation","type":"exact"},{"name":"inhibition of initiation of meiotic DNA synthesis","type":"related"},{"name":"inhibition of initiation of premeiotic DNA replication","type":"narrow"},{"name":"inhibition of initiation of premeiotic DNA synthesis","type":"related"},{"name":"inhibition of meiotic DNA replication initiation","type":"related"},{"name":"inhibition of premeiotic DNA replication initiation","type":"narrow"},{"name":"negative regulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"negative regulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"negative regulation of meiotic DNA replication initiation","type":"related"},{"name":"negative regulation of premeiotic DNA replication initiation","type":"exact"}],"termid":"GO:1904513"}


id: PBO:0069491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 758, pseudogene","termid":"PBO:0069491"}


id: PR:O74754
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP synthase subunit gamma, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02710","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit gamma, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.13","secondary_identifiers":["UniProtKB:O74754"],"synonyms":[{"name":"F-ATPase gamma subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ATP5C1","type":"exact"}],"termid":"PR:O74754"}


id: PBO:0027852
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_resection_during_replication_fork_processing","termid":"PBO:0027852"}


id: MOD:01259
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:9448752","Unimod:314#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylmaleimide derivatized residue","termid":"MOD:00625"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-methylmaleimide - site K","synonyms":[{"name":"Nmethylmaleimide","type":"related"}],"termid":"MOD:01259"}


id: FYPO:0006080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to nuclear exosome foci is normal (i.e. indistinguishable from wild type). Nuclear exosome foci, also called Mmi1 foci, are small structures that form within the nucleus, and contain proteins involved in degrading meiosis-specific RNAs during the mitotic cell cycle, such as Mmi1, Iss10, and Red1.","definition_xrefs":["PMID:21317872","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to nuclear exosome focus during vegetative growth","synonyms":[{"name":"normal protein localisation to nuclear exosome focus during vegetative growth","type":"exact"},{"name":"normal protein localization to Mmi1 focus during vegetative growth","type":"exact"},{"name":"normal protein localization to Mmi1 nuclear focus during vegetative growth","type":"exact"},{"name":"normal protein localization to nuclear exosome foci during vegetative growth","type":"exact"},{"name":"normal protein localization to nuclear exosome focus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006080"}


id: PBO:0003756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Clg1 (predicted)","termid":"PBO:0003756"}


id: PBO:0046930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 47 member D, pseudogene","termid":"PBO:0046930"}


id: GO:0009379
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A DNA helicase complex found at Holliday junctions where the helicase activity is involved in the migration of the junction branch point. The best-characterized example is the E. coli RuvAB complex, in which a hexamer of RuvB subunits possesses helicase activity that is modulated by association with RuvA.","definition_xrefs":["PMID:9442895","PMID:16935884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase complex","termid":"GO:0033202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Holliday junction helicase complex","termid":"GO:0009379"}


id: GO:0099192
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse formed by a cerebellar Golgi cell synapsing on to a cerebellar granule cell.","definition_xrefs":["PMID:26134650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cerebellar Golgi cell to granule cell synapse","termid":"GO:0099192"}


id: GO:2000198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ribonucleoprotein complex localization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of ribonucleoprotein complex localization","termid":"GO:2000197"},{"relation_name":"negatively_regulates","term_name":"ribonucleoprotein complex localization","termid":"GO:0071166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of ribonucleoprotein complex localization","synonyms":[{"name":"negative regulation of RNP localization","type":"exact"},{"name":"negative regulation of cellular ribonucleoprotein complex localization","type":"exact"},{"name":"negative regulation of establishment and maintenance of ribonucleoprotein complex localization","type":"exact"},{"name":"negative regulation of ribonucleoprotein complex localisation","type":"exact"}],"termid":"GO:2000198"}


id: PBO:0074541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synuclein gamma","termid":"PBO:0074541"}


id: PBO:0044711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 10 pseudogene 2","termid":"PBO:0044711"}


id: PBO:0069182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 436, pseudogene","termid":"PBO:0069182"}


id: PATO:0000640
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's exhibiting an alteration in size, shape or organization of its constituent cells.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysplastic","synonyms":[{"name":"dysplasia","type":"narrow"}],"termid":"PATO:0000640"}


id: GO:0090543
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell part that is the central region of the midbody characterized by a gap in alpha-tubulin staining. It is a dense structure of antiparallel microtubules from the central spindle in the middle of the intercellular bridge.","definition_xrefs":["PMID:18641129","PMID:22522702","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"midbody","termid":"GO:0030496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Flemming body","synonyms":[{"name":"Midbody ring","type":"related"}],"termid":"GO:0090543"}


id: PBO:0045378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase 3","termid":"PBO:0045378"}


id: PBO:0086928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pyruvate kinase; functions as a homotetramer in glycolysis to convert phosphoenolpyruvate to pyruvate, the input for aerobic (TCA cycle) or anaerobic (glucose fermentation) respiration; regulated via allosteric activation by fructose bisphosphate; CDC19 has a paralog, PYK2, that arose from the whole genome duplication","termid":"PBO:0086928"}


id: GO:2001311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a lysobisphosphatidic acid. A lysobisphosphatidic acid is a lysophosphatidic acid having the unusual property of a phosphodiester moiety linked to positions sn-1 and sn1' of glycerol; and two additional fatty acids esterified to the glycerol head group.","definition_xrefs":["GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid metabolic process","termid":"GO:0006650"},{"relation_name":"is_a","term_name":"alditol phosphate metabolic process","termid":"GO:0052646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lysobisphosphatidic acid metabolic process","synonyms":[{"name":"LBPA metabolic process","type":"exact"},{"name":"LBPA metabolism","type":"exact"},{"name":"bis(monoacylglycerol) hydrogen phosphate (BMP) metabolic process","type":"exact"},{"name":"bis(monoacylglycerol) hydrogen phosphate (BMP) metabolism","type":"exact"},{"name":"bis(monoacylglycerol) hydrogen phosphate metabolic process","type":"exact"},{"name":"bis(monoacylglycerol) hydrogen phosphate metabolism","type":"exact"},{"name":"lysobisphosphatidic acid metabolism","type":"exact"}],"termid":"GO:2001311"}


id: PBO:0030688
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_P-factor","termid":"PBO:0030688"}


id: GO:0102764
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-deoxotyphasterol + O2 + a reduced electron acceptor = 6-deoxocastasterone + H2O + an oxidized electron acceptor.","definition_xrefs":["EC:1.14.-.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"6-deoxotyphasterol C-23 hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-777"],"termid":"GO:0102764"}


id: PBO:0017932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery associated protein Mep33","termid":"PBO:0017932"}


id: PBO:0067449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 571, pseudogene","termid":"PBO:0067449"}


id: PBO:0090838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-CCCH tandem zinc finger protein, human Tristetraprolin homolog Zfs1, involved in mRNA catabolism","termid":"PBO:0090838"}


id: PBO:0043687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 4I1","termid":"PBO:0043687"}


id: PBO:0031469
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glutathione_gamma-glutamylcysteinyltransferase_activity","termid":"PBO:0031469"}


id: PBO:0007585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADX epimerase (predicted)","termid":"PBO:0007585"}


id: PR:G2TRT7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1235.17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRT7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transmembrane protein C1235.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.17","synonyms":[{"name":"Spom972h-SPCC1235.17","type":"exact"}],"termid":"PR:G2TRT7"}


id: PBO:0077615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMSB4X pseudogene 6","termid":"PBO:0077615"}


id: FYPO:0004694
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which DNA is broken into small fragments when the population in which the cell is found is in stationary phase.","definition_xrefs":["PMID:12963726","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragmented DNA","termid":"FYPO:0000160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"fragmented DNA during stationary phase","synonyms":[{"name":"DNA fragmentation during stationary phase","type":"exact"},{"name":"fragmented nucleus during stationary phase","type":"related"}],"termid":"FYPO:0004694"}


id: PBO:0057954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3677 and MIR940 host gene","termid":"PBO:0057954"}


id: FYPO:0002617
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sodium butyrate. Cells stop growing (and may die) at a concentration of sodium butyrate that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0000139","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to sodium butyrate","synonyms":[{"name":"hypersensitive to sodium butyrate","type":"exact"},{"name":"sensitive to sodium butyrate during mitotic cell cycle","type":"related"},{"name":"sensitive to sodium butyrate during vegetative growth","type":"exact"}],"termid":"FYPO:0002617"}


id: PBO:0025441
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G6PD deficiency","termid":"PBO:0025441"}


id: PBO:0078391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 1-6","termid":"PBO:0078391"}


id: PBO:0089538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate kinase Kcs1","termid":"PBO:0089538"}


id: PBO:0029958
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_ubiquinol-cytochrome-c_reductase_activity","termid":"PBO:0029958"}


id: FYPO:0004413
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a phosphatase activity is decreased during a cellular response to phosphate starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phosphatase activity","termid":"FYPO:0004304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased phosphatase activity during cellular response to phosphate starvation","synonyms":[{"name":"decreased phosphatase activity during phosphate starvation","type":"exact"},{"name":"reduced phosphatase activity during cellular response to phosphate starvation","type":"exact"}],"termid":"FYPO:0004413"}


id: PBO:0042006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 61","termid":"PBO:0042006"}


id: PBO:0001326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase Set8 (predicted)","termid":"PBO:0001326"}


id: FYPO:0008244
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein does not localize to, and is therefore absent from the prospore wall.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during meiotic cell cycle","termid":"FYPO:0005208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to prospore wall","termid":"FYPO:0008244"}


id: PBO:0073597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF2 histone linker PHD RING helicase","termid":"PBO:0073597"}


id: GO:0032732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-1 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-1 production","termid":"GO:0032652"},{"relation_name":"positively_regulates","term_name":"interleukin-1 production","termid":"GO:0032612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-1 production","secondary_identifiers":["GO:0045362","GO:0050716"],"synonyms":[{"name":"activation of interleukin-1 production","type":"narrow"},{"name":"positive regulation of IL-1 production","type":"exact"},{"name":"positive regulation of interleukin-1 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-1 secretion","type":"narrow"},{"name":"stimulation of interleukin-1 production","type":"narrow"},{"name":"up regulation of interleukin-1 production","type":"exact"},{"name":"up-regulation of interleukin-1 production","type":"exact"},{"name":"upregulation of interleukin-1 production","type":"exact"}],"termid":"GO:0032732"}


id: GO:0018781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-halo or 1-pseudohalo-S-triazine = 1-hydroxy-S-triazine.","definition_xrefs":["UM-BBD_ruleID:bt0330"],"gene_count":0,"genotype_count":0,"name":"obsolete S-triazine hydrolase activity (obsolete GO:0018781)","termid":"GO:0018781"}


id: PBO:0036003
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_cellular_response_to_cadmium_ion","termid":"PBO:0036003"}


id: GO:0140818
data:
  {"annotated_genes":["SJAG_04488"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95042],"is_not":false,"summary":null,"term":"GO:0140818"}]},"cv_name":"molecular_function","definition":"A 5'-end triphospho-[mRNA] + H2O = a 5'-end diphospho-[mRNA] + H+ + phosphate.","definition_xrefs":["PMID:9473487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04488":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0140098","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"mRNA 5'-triphosphate monophosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:POLYNUCLEOTIDE-5-PHOSPHATASE-RXN","EC:3.6.1.74","RHEA:67004"],"synonyms":[{"name":"mRNA 5'-phosphatase activity","type":"exact"}],"termid":"GO:0140818","terms_by_termid":{"GO:0140818":null}}


id: PBO:0076053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STN1 subunit of CST complex","termid":"PBO:0076053"}


id: GO:0036230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a granulocyte resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["CL:0000094","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte activation","termid":"GO:0002274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granulocyte activation","termid":"GO:0036230"}


id: GO:0051944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of catecholamine neurotransmitters into a neuron or glial cell.","definition_xrefs":["GOC:ai","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter uptake","termid":"GO:0051582"},{"relation_name":"is_a","term_name":"regulation of catecholamine uptake involved in synaptic transmission","termid":"GO:0051940"},{"relation_name":"is_a","term_name":"positive regulation of amine transport","termid":"GO:0051954"},{"relation_name":"positively_regulates","term_name":"catecholamine uptake involved in synaptic transmission","termid":"GO:0051934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of catecholamine uptake involved in synaptic transmission","synonyms":[{"name":"activation of catecholamine uptake during transmission of nerve impulse","type":"narrow"},{"name":"positive regulation of catecholamine neurotransmitter reuptake","type":"exact"},{"name":"positive regulation of catecholamine neurotransmitter uptake","type":"exact"},{"name":"positive regulation of catecholamine uptake during transmission of nerve impulse","type":"broad"},{"name":"stimulation of catecholamine uptake during transmission of nerve impulse","type":"narrow"},{"name":"up regulation of catecholamine uptake during transmission of nerve impulse","type":"exact"},{"name":"up-regulation of catecholamine uptake during transmission of nerve impulse","type":"exact"},{"name":"upregulation of catecholamine uptake during transmission of nerve impulse","type":"exact"}],"termid":"GO:0051944"}


id: GO:0046988
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer, in a beta 1,3 linkage, of D-glucuronic acid (GlcUA) from UDP-GlcUA to asioloorosomucoid.","definition_xrefs":["GOC:bf","PMID:12511570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"asioloorosomucoid beta-1,3-glucuronosyltransferase activity","termid":"GO:0046988"}


id: GO:0034096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the extent to which the association between sister chromatids of a replicated chromosome is maintained during a meiotic cell cycle.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of maintenance of sister chromatid cohesion","termid":"GO:0034093"},{"relation_name":"is_a","term_name":"regulation of maintenance of meiotic sister chromatid cohesion","termid":"GO:0034094"},{"relation_name":"positively_regulates","term_name":"maintenance of meiotic sister chromatid cohesion","termid":"GO:0034090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of maintenance of meiotic sister chromatid cohesion","termid":"GO:0034096"}


id: PBO:0062423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 84 pseudogene","termid":"PBO:0062423"}


id: GO:0051609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that prevents the activation of the directed movement of a neurotransmitter into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter uptake","termid":"GO:0051581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"inhibition of neurotransmitter uptake","synonyms":[{"name":"inhibition of neurotransmitter import","type":"exact"}],"termid":"GO:0051609"}


id: PBO:0032694
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_sister_chromatid_separation_during_interphase","termid":"PBO:0032694"}


id: GO:0003276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that contributes to the shaping of a heart valve.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in heart morphogenesis","termid":"GO:0003278"},{"relation_name":"part_of","term_name":"heart valve morphogenesis","termid":"GO:0003179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in heart valve morphogenesis","synonyms":[{"name":"apoptosis involved in heart valve morphogenesis","type":"narrow"}],"termid":"GO:0003276"}


id: PBO:0074148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member D1","termid":"PBO:0074148"}


id: GO:0080129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a mature, active 20S proteasome core particle complex that does not contain any regulatory particles.","definition_xrefs":["PMID:17971041","PMID:12401807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome assembly","termid":"GO:0043248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"proteasome core complex assembly","synonyms":[{"name":"20S proteasome assembly","type":"exact"}],"termid":"GO:0080129"}


id: PBO:0080812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-ray repair cross complementing 6 pseudogene 2","termid":"PBO:0080812"}


id: PR:O74951
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC736.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C736.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.02","synonyms":[{"name":"Spom972h-SPCC736.02","type":"exact"}],"termid":"PR:O74951"}


id: PR:Q9UTI1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fub1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTI1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silencing boundary-establishment protein FUB1-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.10","synonyms":[{"name":"Spom972h-fub1","type":"exact"},{"name":"proteasome inhibitor PI31-like protein SPAC15E1.10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTI1"}


id: GO:0001675
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the acrosome from the spermatid Golgi.","definition_xrefs":["GOC:hjd","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"is_a","term_name":"secretory granule organization","termid":"GO:0033363"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"part_of","term_name":"spermatid development","termid":"GO:0007286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"acrosome assembly","synonyms":[{"name":"acrosome formation","type":"exact"}],"termid":"GO:0001675"}


id: PR:Q9HFE5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- apm1 gene.","definition_xrefs":["UniProtKB:Q9HFE5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 complex subunit mu-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP16F5.07","synonyms":[{"name":"Spom972h-apm1","type":"exact"},{"name":"clathrin assembly protein complex 1 mu-1 medium chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mu-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HFE5"}


id: GO:0045914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving catecholamine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"regulation of catecholamine metabolic process","termid":"GO:0042069"},{"relation_name":"negatively_regulates","term_name":"catecholamine metabolic process","termid":"GO:0006584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of catecholamine metabolic process","synonyms":[{"name":"down regulation of catecholamine metabolic process","type":"exact"},{"name":"down-regulation of catecholamine metabolic process","type":"exact"},{"name":"downregulation of catecholamine metabolic process","type":"exact"},{"name":"inhibition of catecholamine metabolic process","type":"narrow"},{"name":"negative regulation of catecholamine metabolism","type":"exact"}],"termid":"GO:0045914"}


id: PBO:0030611
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_alpha-glucan_level","termid":"PBO:0030611"}


id: PATO:0000917
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000917 relative thickness (obsolete PATO:0000917)","termid":"PATO:0000917"}


id: GO:1904773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tetrachloromethane stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:7852267"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to tetrachloromethane (obsolete GO:1904773)","synonyms":[{"name":"cellular response to CCL4","type":"exact"},{"name":"cellular response to carbon tetrachloride","type":"exact"}],"termid":"GO:1904773"}


id: PBO:0063944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl cis/trans isomerase, NIMA-interacting 4 pseudogene 1","termid":"PBO:0063944"}


id: PBO:0113469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TORC1-stimulating GTPase and EGO/GSE complex; subunit of Gtr1-Gtr2 GTPase that activates TORC1 in response to amino acid stimulation; subunit of EGO/GSE vacuolar membrane complex that regulates exit from rapamycin-induced growth arrest and sorting of Gap1p; involved in phosphate transport, telomeric chromatin silencing and oxidative stress response; activated by Iml1p (GAP) subunit of SEACIT complex; targeted to vacuole via AP-3 pathway; similar to human RagA and RagB","termid":"PBO:0113469"}


id: PBO:0087222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scaffold subunit of the Hrd1p ubiquitin ligase; also promotes ligase oligomerization; involved in ER-associated protein degradation (ERAD); interacts with the U1 snRNP-specific protein, Snp1p","termid":"PBO:0087222"}


id: PBO:0053539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 543","termid":"PBO:0053539"}


id: PBO:0059207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylthioribose-1-phosphate isomerase 1","termid":"PBO:0059207"}


id: PBO:0078190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 4-3","termid":"PBO:0078190"}


id: GO:0015376
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (betaine or gamma-aminobutyric acid)(out) + Na+(out) = (betaine or gamma-aminobutyric acid)(in) + Na+(in).","definition_xrefs":["TC:2.A.22.3.1"],"gene_count":0,"genotype_count":0,"name":"obsolete betaine/GABA:sodium symporter activity (obsolete GO:0015376)","synonyms":[{"name":"betaine/GABA:sodium symporter activity","type":"exact"}],"termid":"GO:0015376"}


id: PBO:0080778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related 9","termid":"PBO:0080778"}


id: PBO:0052610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRAB box domain containing 1","termid":"PBO:0052610"}


id: PBO:0060631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCK interacting protein with SH3 domain","termid":"PBO:0060631"}


id: PATO:0001661
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An action potential which is relatively high.","definition_xrefs":["PATOC:GVG"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001661 increased action potential (obsolete PATO:0001661)","synonyms":[{"name":"high action potential","type":"exact"}],"termid":"PATO:0001661"}


id: PBO:0055884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 8 VRAC subunit B","termid":"PBO:0055884"}


id: GO:0034882
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cis-aconitamide + H2O = cis-aconitate + HN3.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-aconitamide amidase activity (obsolete GO:0034882)","termid":"GO:0034882"}


id: GO:0008352
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex possessing an activity that couples ATP hydrolysis to the severing of microtubules; usually a heterodimer comprising a catalytic subunit (often 60kDa) and a regulatory subunit (often 80 kDa).","definition_xrefs":["PMID:10910766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule associated complex","termid":"GO:0005875"},{"relation_name":"part_of","term_name":"microtubule organizing center","termid":"GO:0005815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0015630"],"is_obsolete":false,"name":"katanin complex","termid":"GO:0008352"}


id: PBO:0063719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyroglutamyl-peptidase I","termid":"PBO:0063719"}


id: PBO:0088450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WLM domain metallopeptidase implicated in DNA repair Wss1","termid":"PBO:0088450"}


id: PBO:0052330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1671","termid":"PBO:0052330"}


id: PBO:0030013
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_Calcofluor_White","termid":"PBO:0030013"}


id: FYPO:0005890
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is normal (i.e. indistinguishable from wild type) during a cellular response to calcium ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during vegetative growth","termid":"FYPO:0000838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to nucleus during cellular response to calcium ion","synonyms":[{"name":"normal protein localisation to nucleus during cellular response to calcium ion","type":"exact"},{"name":"normal protein localization to nucleus during cellular response to calcium","type":"exact"},{"name":"normal protein localization to nucleus during cellular response to calcium ion during mitotic cell cycle","type":"related"},{"name":"normal protein localization to nucleus during cellular response to calcium ion during vegetative growth","type":"exact"}],"termid":"FYPO:0005890"}


id: FYPO:0007359
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of heavy water (D2O) than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"resistance to heavy water","synonyms":[{"name":"resistant to heavy water","type":"exact"},{"name":"resistance to D2O","type":"exact"},{"name":"resistance to dideuterium oxide","type":"exact"},{"name":"resistance to heavy water during mitotic cell cycle","type":"related"},{"name":"resistance to heavy water during vegetative growth","type":"exact"}],"termid":"FYPO:0007359"}


id: GO:0050366
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: feruloyl-CoA + tyramine = CoA + N-feruloyltyramine.","definition_xrefs":["EC:2.3.1.110","MetaCyc:TYRAMINE-N-FERULOYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"tyramine N-feruloyltransferase activity","secondary_identifiers":["RHEA:19685"],"synonyms":[{"name":"feruloyl-CoA tyramine N-feruloyl-CoA transferase activity","type":"related"},{"name":"feruloyl-CoA:tyramine N-(hydroxycinnamoyl)transferase activity","type":"related"},{"name":"feruloyltyramine synthase activity","type":"related"},{"name":"tyramine N-feruloyl-CoA transferase activity","type":"related"},{"name":"tyramine feruloyltransferase activity","type":"related"}],"termid":"GO:0050366"}


id: PBO:0072672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor transporter protein 5 (putative)","termid":"PBO:0072672"}


id: PBO:0049155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 1C","termid":"PBO:0049155"}


id: PBO:0055829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and calponin homology domain containing 4","termid":"PBO:0055829"}


id: PBO:0030744
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_phosphatidylinositol-3-phosphate_level","termid":"PBO:0030744"}


id: PBO:0049125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor class C group 5 member B","termid":"PBO:0049125"}


id: GO:0033755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 sulfur + 4 H2O + O2 = 2 hydrogen sulfide + 2 bisulfite + 2 H+.","definition_xrefs":["PMID:1522063","EC:1.13.11.55"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"sulfur oxygenase/reductase activity","secondary_identifiers":["MetaCyc:1.13.11.55-RXN","RHEA:13957"],"synonyms":[{"name":"SOR","type":"related"},{"name":"sulfur oxygenase activity","type":"broad"},{"name":"sulfur:oxygen oxidoreductase (hydrogen-sulfide- and sulfite-forming) activity","type":"related"},{"name":"sulphur oxygenase/reductase activity","type":"exact"}],"termid":"GO:0033755"}


id: GO:0048560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that determines the orientation of an anatomical structure with reference to an axis.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"part_of","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of anatomical structure orientation","termid":"GO:0048560"}


id: GO:0050734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a hydroxycinnamoyl group to an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"hydroxycinnamoyltransferase activity","termid":"GO:0050734"}


id: PBO:0045809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1","termid":"PBO:0045809"}


id: PBO:0080512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP actin nucleation promoting factor","termid":"PBO:0080512"}


id: PBO:0082708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the MICOS complex; MICOS (formerly MINOS or MitOS) is a mitochondrial inner membrane complex that extends into the intermembrane space and has a role in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane; Mic26p is a non-essential component of the complex; orthologous to human APOO and APOOL","termid":"PBO:0082708"}


id: PBO:0064638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pro-platelet basic protein pseudogene 1","termid":"PBO:0064638"}


id: GO:0098829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Uptake of folic into the blood by absorption from the small intestine.","definition_xrefs":["PMID:19762432","GOC:BHF","GOC:dos","GOC:hal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal absorption","termid":"GO:0050892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal folate absorption","termid":"GO:0098829"}


id: PBO:0034170
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_transport_across","termid":"PBO:0034170"}


id: GO:0052362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of protein macromolecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of symbiont protein (obsolete GO:0052362)","termid":"GO:0052362"}


id: PBO:0039241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 1 family member A2","termid":"PBO:0039241"}


id: PATO:0001955
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being narrowly triangular, wider at the apex and tapering toward the base.","definition_xrefs":["wordreference:wordreference"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triangular","termid":"PATO:0001875"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cuneate","synonyms":[{"name":"wedge-shaped","type":"exact"}],"termid":"PATO:0001955"}


id: PBO:0066888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 188","termid":"PBO:0066888"}


id: PBO:0089028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome export GTPase Nog2","termid":"PBO:0089028"}


id: GO:0034277
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-copalyl diphosphate = ent-cassa-12,15-diene + diphosphate.","definition_xrefs":["EC:4.2.3.28","RHEA:25532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"ent-cassa-12,15-diene synthase activity","secondary_identifiers":["KEGG_REACTION:R09119","MetaCyc:RXN-4881"],"synonyms":[{"name":"ent-copalyl-diphosphate diphosphate-lyase (ent-cassa-12,15-diene-forming) activity","type":"exact"}],"termid":"GO:0034277"}


id: FYPO:0003580
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Sad1 accumulates is greater than normal during a cellular response to DNA damage.","definition_xrefs":["PMID:24943839","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased number of Sad1 foci during response to DNA damage","synonyms":[{"name":"increased number of Sad1 foci during DNA damage response","type":"exact"},{"name":"increased number of Sad1 foci during response to DNA damage during mitotic cell cycle","type":"related"},{"name":"increased number of Sad1 foci during response to DNA damage during vegetative growth","type":"exact"}],"termid":"FYPO:0003580"}


id: PBO:0066694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enriched in melanoma 3","termid":"PBO:0066694"}


id: GO:1903785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-valine across a membrane.","definition_xrefs":["GOC:TermGenie","GO_REF:0000069","PMID:20944394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"valine transport","termid":"GO:0015829"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"L-valine transmembrane transport","termid":"GO:1903785"}


id: GO:0170027
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An outer kinetochore complex involved in the attachment of microtubule ends to the chromosomes during mitosis. In humans, it contains the subunits SKA1, SKA2 and SKA3.","definition_xrefs":["PMID:19289083","PMID:22483620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"outer kinetochore","termid":"GO:0000940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0000776"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0000776","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"SKA complex","synonyms":[{"name":"SKA1 complex","type":"exact"}],"termid":"GO:0170027"}


id: GO:0061691
data:
  {"annotated_genes":["SJAG_00141","SJAG_01216","SJAG_02515","SJAG_04953","SJAG_01199","SJAG_04823"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114354,113444,91256,104885,101086,96059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061692"}]},"cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of hydrogen peroxide. These include transport of hydrogen peroxide away from sensitive areas and to compartments or complexes whose purpose is sequestration.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrogen peroxide metabolic process","termid":"GO:0042743"},{"relation_name":"is_a","term_name":"detoxification of inorganic compound","termid":"GO:0061687"},{"relation_name":"part_of","term_name":"response to hydrogen peroxide","termid":"GO:0042542"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_02515":null,"SJAG_04823":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"detoxification of hydrogen peroxide","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061691","terms_by_termid":{"GO:0061692":null}}


id: PBO:0085052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential protein of unknown function; has structural resemblance to plant storage and ligand binding proteins (canavalin, glycinin, auxin binding protein) and to some enzymes (epimerase, germin); localizes to the nucleus and cytoplasm","termid":"PBO:0085052"}


id: PBO:0061088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK2 homeobox 6","termid":"PBO:0061088"}


id: GO:0015984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of noncoupled solute translocation or facilitated diffusion.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete uniport (obsolete GO:0015984)","synonyms":[{"name":"uniport","type":"exact"}],"termid":"GO:0015984"}


id: GO:0052011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of pectin in the host cell wall. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by symbiont of host cell wall pectin (obsolete GO:0052011)","synonyms":[{"name":"catabolism by organism of host cell wall pectin","type":"exact"}],"termid":"GO:0052011"}


id: GO:0090723
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a growth cone, the migrating motile tip of a growing nerve cell axon or dendrite.","definition_xrefs":["GOC:tb","GOC:sl"],"gene_count":0,"genotype_count":0,"name":"obsolete growth cone part (obsolete GO:0090723)","termid":"GO:0090723"}


id: PBO:0087508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of heterodimeric nuclear SUMO activating enzyme E1 with Aos1p; activates Smt3p (SUMO) before its conjugation to proteins (sumoylation), which may play a role in protein targeting; essential for viability","termid":"PBO:0087508"}


id: FYPO:0002027
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell forms an actomyosin contractile ring that is not perpendicular to the long axis of the cell.","definition_xrefs":["PMID:8834798","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized actomyosin contractile ring","termid":"FYPO:0001369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001985","FYPO:0000138","FYPO:0004803","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"angled actomyosin contractile ring","synonyms":[{"name":"actomyosin contractile ring not orthogonal to long axis of cell","type":"exact"},{"name":"actomyosin contractile ring not perpendicular to long axis of cell","type":"related"},{"name":"angled actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"angled actomyosin contractile ring during vegetative growth","type":"exact"},{"name":"angled cytokinetic contractile ring","type":"exact"},{"name":"angled mitotic contractile ring","type":"exact"},{"name":"tilted actomyosin contractile ring","type":"exact"}],"termid":"FYPO:0002027"}


id: PBO:0057561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 718","termid":"PBO:0057561"}


id: PBO:0038905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor D2","termid":"PBO:0038905"}


id: PBO:0031436
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_trimethylation","termid":"PBO:0031436"}


id: GO:0060210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The estrous cycle phase in which there is subsiding follicular function.","definition_xrefs":["GOC:dph","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"estrous cycle phase","termid":"GO:0060206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metestrus","termid":"GO:0060210"}


id: GO:0047711
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: blasticidin S + H2O = deaminohydroxyblasticidin S + NH3.","definition_xrefs":["EC:3.5.4.23","MetaCyc:BLASTICIDIN-S-DEAMINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"blasticidin-S deaminase activity","secondary_identifiers":["RHEA:10148"],"synonyms":[{"name":"blasticidin-S aminohydrolase activity","type":"related"}],"termid":"GO:0047711"}


id: PBO:0001086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L19 (predicted)","termid":"PBO:0001086"}


id: GO:0007535
data:
  {"annotated_genes":["SJAG_01068","SJAG_01495","SJAG_01601","SJAG_02319"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83999,95182,112930,114907],"is_not":false,"summary":null,"term":"GO:0007535"}]},"cv_name":"biological_process","definition":"The process that determines which donor locus a cell uses, in preference to another, in mating type switching.","definition_xrefs":["GOC:mah","PMID:9928492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"mating type switching","termid":"GO:0007533"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01068":null,"SJAG_01495":null,"SJAG_01601":null,"SJAG_02319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"donor selection","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"donor preference","type":"related"}],"termid":"GO:0007535","terms_by_termid":{"GO:0007535":null}}


id: PBO:0088200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc metalloendopeptidase; found in the cytoplasm and intermembrane space of mitochondria; with Cym1p, involved in degradation of mitochondrial proteins and of presequence peptides cleaved from imported proteins; protein abundance increases in response to DNA replication stress","termid":"PBO:0088200"}


id: GO:1901870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ecgonone methyl ester.","definition_xrefs":["GOC:TermGenie","PMID:22665766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"tropane alkaloid metabolic process","termid":"GO:0046448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ecgonone methyl ester metabolic process","synonyms":[{"name":"ecgonone methyl ester metabolism","type":"exact"}],"termid":"GO:1901870"}


id: PBO:0048958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein Ib platelet subunit beta","termid":"PBO:0048958"}


id: PBO:0078736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase O","termid":"PBO:0078736"}


id: FYPO:0000732
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the mitotic spindle is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short spindle","termid":"FYPO:0000130"},{"relation_name":"is_a","term_name":"abnormal bipolar mitotic spindle","termid":"FYPO:0001574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0002399","FYPO:0000120","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"short bipolar mitotic spindle","synonyms":[{"name":"decreased mitotic spindle length","type":"exact"},{"name":"short mitotic spindle","type":"exact"},{"name":"short mitotic spindle during vegetative growth","type":"exact"},{"name":"short mitotic spindles","type":"exact"},{"name":"short spindle during mitosis","type":"exact"},{"name":"short spindle during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000732"}


id: GO:0140946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl4-[histone H3] + 2 S-adenosyl-L-methionine = 2 H+ + N6,N6-dimethyl-L-lysyl4-[histone H3] + 2 S-adenosyl-L-homocysteine. This reaction is the successive addition of two methyl groups to the unmethylated lysine residue at position 4 of histone H3, producing histone H3K4me2.","definition_xrefs":["RHEA:64448"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K4 methyltransferase activity","termid":"GO:0042800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0008276","GO:0016741","GO:0003674","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"histone H3K4 dimethyltransferase activity","secondary_identifiers":["EC:2.1.1.370"],"synonyms":[{"name":"histone H3-K4 dimethylation","type":"broad"},{"name":"histone H3K4 dimethylase activity","type":"exact"},{"name":"histone H3K4 dimethylation","type":"broad"},{"name":"histone lysine N-dimethyltransferase activity (H3-K4 specific)","type":"exact"}],"termid":"GO:0140946"}


id: PBO:0066288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member N, pseudogene","termid":"PBO:0066288"}


id: GO:0030829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of cGMP.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cGMP catabolic process (obsolete GO:0030829)","synonyms":[{"name":"regulation of cGMP breakdown","type":"exact"},{"name":"regulation of cGMP catabolism","type":"exact"},{"name":"regulation of cGMP degradation","type":"exact"}],"termid":"GO:0030829"}


id: GO:0050270
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-homocysteine + H2O + H+ = S-inosyl-L-homocysteine + NH4.","definition_xrefs":["EC:3.5.4.28","RHEA:20716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"S-adenosylhomocysteine deaminase activity","secondary_identifiers":["KEGG_REACTION:R00193","MetaCyc:S-ADENOSYLHOMOCYSTEINE-DEAMINASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-homocysteine aminohydrolase activity","type":"related"},{"name":"adenosylhomocysteine deaminase activity","type":"related"}],"termid":"GO:0050270"}


id: RO:0002558
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of is evidence for","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_evidence_or_inference_to","termid":"RO:0002616"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_evidence","termid":"RO:0002558"}


id: PBO:0046223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 16","termid":"PBO:0046223"}


id: PBO:0077642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tenascin C","termid":"PBO:0077642"}


id: GO:0047194
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-O-(indol-3-ylacetyl)-beta-D-glucose + myo-inositol = 1L-1-O-(indol-3-yl)acetyl-myo-inositol + D-glucose.","definition_xrefs":["RHEA:21180","EC:2.3.1.72"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"indoleacetylglucose-inositol O-acyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04333","MetaCyc:2.3.1.72-RXN"],"synonyms":[{"name":"1-O-(indol-3-yl)acetyl-beta-D-glucose:myo-inositol (indol-3-yl)acetyltransferase activity","type":"related"},{"name":"1-O-(indol-3-ylacetyl)-beta-D-glucose:myo-inositol indole-3-ylacetyltransferase activity","type":"related"},{"name":"indole-3-acetyl-beta-1-D-glucoside:myo-inositol indoleacetyltransferase activity","type":"related"}],"termid":"GO:0047194"}


id: PR:Q10075
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pcs2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione gamma-glutamylcysteinyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.10","synonyms":[{"name":"Spom972h-pcs2","type":"exact"},{"name":"phytochelatin synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10075"}


id: GO:0140110
data:
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id: PBO:0071838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 33","termid":"PBO:0071838"}


id: GO:1901256
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of macrophage colony-stimulating factor production.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"macrophage colony-stimulating factor production","termid":"GO:0036301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage colony-stimulating factor production","synonyms":[{"name":"regulation of M-CSF production","type":"exact"}],"termid":"GO:1901256"}


id: PBO:0063420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 3B","termid":"PBO:0063420"}


id: PBO:0058804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7846","termid":"PBO:0058804"}


id: GO:0009398
data:
  {"annotated_genes":["SJAG_04845"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111800],"is_not":false,"summary":null,"term":"GO:0009398"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of FMN, the oxidized form of flavin mononucleotide (riboflavin 5'-(dihydrogen phosphate)), which acts as a coenzyme for a number of oxidative enzymes including NADH dehydrogenase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside monophosphate biosynthetic process","termid":"GO:0009156"},{"relation_name":"is_a","term_name":"ribonucleotide biosynthetic process","termid":"GO:0009260"},{"relation_name":"is_a","term_name":"flavin-containing compound biosynthetic process","termid":"GO:0042727"},{"relation_name":"is_a","term_name":"FMN metabolic process","termid":"GO:0046444"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"FMN biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"FMN anabolism","type":"exact"},{"name":"FMN biosynthesis","type":"exact"},{"name":"FMN formation","type":"exact"},{"name":"FMN synthesis","type":"exact"}],"termid":"GO:0009398","terms_by_termid":{"GO:0009398":null}}


id: PBO:0068767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 4, pseudogene","termid":"PBO:0068767"}


id: PBO:0083964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Geranylgeranyl diphosphate synthase (GGPPS); increases the intracellular pool of geranylgeranyl diphosphate, suppressor of bet2 mutation that causes defective geranylgeranylation of small GTP-binding proteins that mediate vesicular traffic","termid":"PBO:0083964"}


id: PBO:0043768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX17 pseudogene 1","termid":"PBO:0043768"}


id: FYPO:0007340
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein localizes to a larger portion of the chromosome than normal in the euchromatic regions.","definition_xrefs":["PomBase:mah","PMID:18957202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered spatial extent of protein localization to chromatin","termid":"FYPO:0007465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased spatial extent of protein localization to euchromatin","synonyms":[{"name":"increased spatial extent of protein localisation to euchromatin","type":"exact"},{"name":"increased spatial extent of protein localization to euchromatin during mitotic cell cycle","type":"related"},{"name":"increased spatial extent of protein localization to euchromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0007340"}


id: PBO:0054856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2270","termid":"PBO:0054856"}


id: GO:0042993
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the movement of a transcription factor from the cytoplasm to the nucleus.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription factor import into nucleus (obsolete GO:0042993)","synonyms":[{"name":"activation of transcription factor import into nucleus","type":"narrow"},{"name":"positive regulation of transcription factor import into cell nucleus","type":"exact"},{"name":"positive regulation of transcription factor transport from cytoplasm to nucleus","type":"exact"},{"name":"positive regulation of transcription factor-nucleus import","type":"exact"},{"name":"stimulation of transcription factor import into nucleus","type":"narrow"},{"name":"up regulation of transcription factor import into nucleus","type":"exact"},{"name":"up-regulation of transcription factor import into nucleus","type":"exact"},{"name":"upregulation of transcription factor import into nucleus","type":"exact"}],"termid":"GO:0042993"}


id: SO:0000367
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region within an integron, adjacent to an integrase, at which site specific recombination involving an attC_site takes place.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integration_excision_site","termid":"SO:0000946"},{"relation_name":"part_of","term_name":"integron","termid":"SO:0000365"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attI_site","synonyms":[{"name":"attI site","type":"exact"}],"termid":"SO:0000367"}


id: PBO:0069347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 607, pseudogene","termid":"PBO:0069347"}


id: PBO:0066257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBMX2 pseudogene 5","termid":"PBO:0066257"}


id: GO:0004214
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal dipeptide, Xaa-Xbb from Xaa-Xbb-Xcc, except when Xaa is Arg or Lys, or Xbb or Xcc is Pro.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dipeptidyl-peptidase I activity (obsolete GO:0004214)","synonyms":[{"name":"dipeptidyl-peptidase I activity","type":"exact"}],"termid":"GO:0004214"}


id: PBO:0066350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger and CHY zinc finger domain containing 1","termid":"PBO:0066350"}


id: FYPO:0006755
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) at one or more specific promoter element(s) is decreased when the cell is subject to glucose starvation.","definition_xrefs":["PMID:28934464","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin binding","termid":"FYPO:0002577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000702"],"is_obsolete":false,"name":"decreased chromatin binding at promoter element during glucose starvation","synonyms":[{"name":"decreased chromatin binding at promoter element during glucose depletion","type":"exact"},{"name":"decreased chromatin binding at promoter element during glucose deprivation","type":"related"},{"name":"reduced chromatin binding at promoter element during glucose starvation","type":"exact"}],"termid":"FYPO:0006755"}


id: PBO:0060268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 2","termid":"PBO:0060268"}


id: GO:0102213
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: coenzyme A + ATP + an in-chain hydroxy fatty acid = diphosphoric acid + AMP + a in-chain hydroxyacyl-CoA.","definition_xrefs":["GOC:pz","EC:6.2.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid ligase activity","termid":"GO:0015645"},{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"in-chain hydroxy fatty acyl-CoA synthetase activity","secondary_identifiers":["MetaCyc:RXN-12184"],"termid":"GO:0102213"}


id: GO:0044753
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Intermediate organelles formed during macroautophagy through the fusion between autophagosomes and endosomes.","definition_xrefs":["PMID:9705327","GOC:sart","GOC:autophagy","PMID:19008921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagosome","termid":"GO:0005776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"amphisome","termid":"GO:0044753"}


id: FYPO:0000523
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which peroxisomal transport does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peroxisomal transport","termid":"FYPO:0000522"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished peroxisomal transport","synonyms":[{"name":"abolished peroxisomal transport during mitotic cell cycle","type":"related"},{"name":"absent peroxisomal transport","type":"exact"},{"name":"peroxisomal transport abolished","type":"exact"},{"name":"peroxisomal transport abolished during vegetative growth","type":"exact"},{"name":"peroxisomal transport: absent","type":"related"}],"termid":"FYPO:0000523"}


id: GO:1900596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (+)-kotanin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"(+)-kotanin metabolic process","termid":"GO:1900594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"(+)-kotanin biosynthetic process","synonyms":[{"name":"(+)-kotanin anabolism","type":"exact"},{"name":"(+)-kotanin biosynthesis","type":"exact"},{"name":"(+)-kotanin formation","type":"exact"},{"name":"(+)-kotanin synthesis","type":"exact"}],"termid":"GO:1900596"}


id: PBO:0029721
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_wall_galactomannan_level","termid":"PBO:0029721"}


id: GO:0150059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular amylin, or another ligand, combining with an amylin receptor 1 (AMY1), a G protein-coupled receptor complex, on the surface of the target cell. Other ligands that have been shown to initiate the AMY1 signaling pathway include the calcitonin related peptide (CGRP) and adrenomedullin (AM/ADM).","definition_xrefs":["GOC:bc","GOC:aruk","PMID:22500019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylin receptor signaling pathway","termid":"GO:0097647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"amylin receptor 1 signaling pathway","synonyms":[{"name":"AMY1 signaling pathway","type":"exact"}],"termid":"GO:0150059"}


id: PBO:0085788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function","termid":"PBO:0085788"}


id: PBO:0050375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A2/B1","termid":"PBO:0050375"}


id: PBO:0087487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of COMPASS (Set1C); a complex which methylates histone H3 on lysine 4 and is required in telomeric transcriptional silencing; promotes meiotic DSB formation by interacting with H3K4me3 and Rec107p, a protein required for Spo11p-catalyzed DSB formation located on chromosome axes; interacts with Orc2p; PHD finger domain protein similar to human CGBP, an unmethylated CpG binding protein; relocalizes to cytosol in response to hypoxia","termid":"PBO:0087487"}


id: PBO:0061770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OBI1 antisense RNA 1","termid":"PBO:0061770"}


id: PBO:0070830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 9","termid":"PBO:0070830"}


id: PBO:0029135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_prospore_formation","termid":"PBO:0029135"}


id: GO:0044065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a respiratory system process, an organ system process carried out by any of the organs or tissues of the respiratory system.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of respiratory gaseous exchange","termid":"GO:0043576"},{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"regulates","term_name":"respiratory system process","termid":"GO:0003016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of respiratory system process","termid":"GO:0044065"}


id: PBO:0071174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 15","termid":"PBO:0071174"}


id: PBO:0050958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon lambda 1","termid":"PBO:0050958"}


id: PBO:0081658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF582 divergent transcript","termid":"PBO:0081658"}


id: PBO:0041768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 8","termid":"PBO:0041768"}


id: PBO:0113146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-dependent zinc transferase; couples GTP hydrolysis to the activation of methionine aminopeptidase Map1p, especially during zinc starvation; deletion confers reduced fitness in saline; contains GTPase sequence motifs and a CxCC metal-binding motif","termid":"PBO:0113146"}


id: FYPO:0002890
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the horsetail nucleus is abnormal. The horsetail nucleus forms during the rapid oscillatory movement at meiotic prophase I.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during meiosis I","termid":"FYPO:0005651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0002403"],"is_obsolete":false,"name":"abnormal horsetail nucleus morphology","synonyms":[{"name":"abnormal horsetail nuclear morphology","type":"exact"}],"termid":"FYPO:0002890"}


id: FYPO:0007294
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a vegetative cell is pear-shaped, and in which actin is localized only to the rounded end of the cell.","definition_xrefs":["PomBase:mah","PMID:10087262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pear-shaped vegetative cell","termid":"FYPO:0001120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"pear-shaped vegetative cell with actin localized to rounded end","synonyms":[{"name":"pear-shaped cell with actin localized to rounded end during vegetative growth","type":"exact"},{"name":"pear-shaped vegetative cell with actin localized to rounded end during mitotic cell cycle","type":"related"},{"name":"pear-shaped vegetative cell with actin localized to rounded new end","type":"narrow"},{"name":"tadpole cell","type":"exact"}],"termid":"FYPO:0007294"}


id: PBO:0026834
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_poly(U)_polymerase_activity","termid":"PBO:0026834"}


id: PBO:0057847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3159","termid":"PBO:0057847"}


id: PATO:0001277
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of orange hue and high saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orange","termid":"PATO:0000953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saturated orange","synonyms":[{"name":"bright orange","type":"related"}],"termid":"PATO:0001277"}


id: PBO:0046556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group H member 10, envelope","termid":"PBO:0046556"}


id: PBO:0081815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 736 pseudogene 8, Y-linked","termid":"PBO:0081815"}


id: GO:0072302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of metanephric glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glomerular mesangial cell proliferation","termid":"GO:0072125"},{"relation_name":"is_a","term_name":"regulation of metanephric glomerular mesangial cell proliferation","termid":"GO:0072301"},{"relation_name":"negatively_regulates","term_name":"metanephric glomerular mesangial cell proliferation involved in metanephros development","termid":"GO:0072262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metanephric glomerular mesangial cell proliferation","termid":"GO:0072302"}


id: GO:0052752
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: reduced coenzyme F420 + CoB-S-S-CoM = coenzyme F420 + CoM-SH + CoB-SH.","definition_xrefs":["GOC:mengo_curators","PMID:9914308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"reduced coenzyme F420:heterodisulfide oxidoreductase activity","synonyms":[{"name":"F420-dependent heterodisulfide oxidoreductase activity","type":"exact"},{"name":"F420H2:heterodisulfide oxidoreductase activity","type":"exact"},{"name":"coenzyme F420-dependent heterodisulfide oxidoreductase activity","type":"exact"}],"termid":"GO:0052752"}


id: GO:0045226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of polysaccharides used in extracellular structures.","definition_xrefs":["GOC:go_curators","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"extracellular polysaccharide metabolic process","termid":"GO:0046379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"extracellular polysaccharide biosynthetic process","synonyms":[{"name":"extracellular polysaccharide anabolism","type":"exact"},{"name":"extracellular polysaccharide biosynthesis","type":"exact"},{"name":"extracellular polysaccharide formation","type":"exact"},{"name":"extracellular polysaccharide synthesis","type":"exact"}],"termid":"GO:0045226"}


id: PBO:0076338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 6","termid":"PBO:0076338"}


id: PBO:0066717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 14","termid":"PBO:0066717"}


id: GO:0004441
data:
  {"annotated_genes":["SJAG_01702"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111615],"is_not":false,"summary":null,"term":"GO:0004441"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,4-bisphosphate + H2O = 1D-myo-inositol 4-phosphate + phosphate.","definition_xrefs":["GOC:hb","EC:3.1.3.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol bisphosphate phosphatase activity","termid":"GO:0016312"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01702":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"inositol-1,4-bisphosphate 1-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.1.3.57-RXN","RHEA:15553","Reactome:R-HSA-1855208"],"synonyms":[{"name":"1D-myo-inositol-1,4-bisphosphate 1-phosphohydrolase activity","type":"related"},{"name":"inositol polyphosphate 1-phosphatase activity","type":"broad"},{"name":"inositol-polyphosphate 1-phosphatase activity","type":"related"}],"termid":"GO:0004441","terms_by_termid":{"GO:0004441":null}}


id: GO:0055057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process resulting in the physical partitioning and separation of a neuroblast into daughter cells. A neuroblast is any cell that will divide and give rise to a neuron.","definition_xrefs":["PMID:11250167","PMID:11163136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell division","termid":"GO:0051301"},{"relation_name":"part_of","term_name":"neuroblast proliferation","termid":"GO:0007405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast division","synonyms":[{"name":"neuroblast cell division","type":"exact"}],"termid":"GO:0055057"}


id: GO:0010669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A tissue homeostatic process required for the maintenance of epithelial structure.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue homeostasis","termid":"GO:0001894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial structure maintenance","termid":"GO:0010669"}


id: PBO:0083624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin ligase; forms heterodimer with Rad6p to regulate K63 polyubiquitination in response to oxidative stress and to monoubiquinate histone H2B-K123, which is required for the subsequent methylation of histone H3-K4 and H3-K79; required for DSBR, transcription, silencing, and checkpoint control; interacts with RNA-binding protein Npl3p, linking histone ubiquitination to mRNA processing; Bre1p-dependent histone ubiquitination promotes pre-mRNA splicing","termid":"PBO:0083624"}


id: PATO:0001547
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's exhibiting the physical characteristics of an entity consisting of particles that have neither a defined volume nor defined shape.","definition_xrefs":["Chemistry:http://chemistry.about.com/od/chemistryglossary/a/gasdefinition.htm","PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quality of a substance","termid":"PATO:0002198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quality of a gas","synonyms":[{"name":"gaseous","type":"exact"}],"termid":"PATO:0001547"}


id: PBO:0054243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1625","termid":"PBO:0054243"}


id: PBO:0055136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2555","termid":"PBO:0055136"}


id: PBO:0078590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 3, Y-linked","termid":"PBO:0078590"}


id: PBO:0069792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1078, pseudogene","termid":"PBO:0069792"}


id: GO:1990355
data:
  {"annotated_genes":["SJAG_00419","SJAG_04953"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91627,96062],"is_not":false,"summary":null,"term":"GO:1990355"}]},"cv_name":"biological_process","definition":"The generation of L-methionine from methionine sulphoxide.","definition_xrefs":["PMID:24118096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine salvage","termid":"GO:0071267"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00419":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"L-methionine salvage from methionine sulphoxide","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"methionine salvage from methionine sulphoxide","type":"broad"}],"termid":"GO:1990355","terms_by_termid":{"GO:1990355":null}}


id: PBO:0059093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mortality factor 4 (pseudogene)","termid":"PBO:0059093"}


id: GO:0001886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form (cell shape and size) that occurs during the differentiation of an endothelial cell.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell morphogenesis","termid":"GO:0003382"},{"relation_name":"part_of","term_name":"endothelial cell development","termid":"GO:0001885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell morphogenesis","termid":"GO:0001886"}


id: GO:0031308
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the nuclear outer membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of nuclear outer membrane (obsolete GO:0031308)","synonyms":[{"name":"intrinsic to nuclear outer membrane","type":"narrow"}],"termid":"GO:0031308"}


id: PBO:0067755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 54","termid":"PBO:0067755"}


id: PBO:0060394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle organizing protein 2B","termid":"PBO:0060394"}


id: PBO:0063504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"podoplanin","termid":"PBO:0063504"}


id: PBO:0036509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-dependent reductase for Dph3, Cbr1 (predicted)","termid":"PBO:0036509"}


id: PBO:0002515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Sfp1 (predicted)","termid":"PBO:0002515"}


id: PBO:0088215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid/polyamine transporter (predicted)","termid":"PBO:0088215"}


id: PBO:0003763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP complex subunit Trs20 (predicted)","termid":"PBO:0003763"}


id: PBO:0066220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 25","termid":"PBO:0066220"}


id: PBO:0081449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 317","termid":"PBO:0081449"}


id: PBO:0076015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STK4 divergent transcript","termid":"PBO:0076015"}


id: PBO:0028472
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_succinate_dehydrogenase_(ubiquinone)_activity","termid":"PBO:0028472"}


id: PBO:0056526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanocortin 3 receptor","termid":"PBO:0056526"}


id: PBO:0049367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2I repeat domain containing 2","termid":"PBO:0049367"}


id: PBO:0089202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L31","termid":"PBO:0089202"}


id: PBO:0055248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2675","termid":"PBO:0055248"}


id: PBO:0049306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase omega 1","termid":"PBO:0049306"}


id: GO:0060466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts the inactive process of meiosis in an egg after the egg has been fertilized or physiologically activated. Eggs generally arrest in meiosis and complete the process after activation.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation of meiosis","termid":"GO:0090427"},{"relation_name":"part_of","term_name":"egg activation","termid":"GO:0007343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0140013"],"is_obsolete":false,"name":"activation of meiosis involved in egg activation","synonyms":[{"name":"reactivation of meiosis after fertilization","type":"narrow"},{"name":"resumption of meiosis involved in egg activation","type":"exact"}],"termid":"GO:0060466"}


id: PBO:0031386
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glucan_synthesis","termid":"PBO:0031386"}


id: PBO:0050753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 15","termid":"PBO:0050753"}


id: PBO:0046233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 27","termid":"PBO:0046233"}


id: SO:0002201
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repeat at the ends of and within the sequence for which it has functional significance other than long terminal repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal_repeat","synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:terminal","type":"exact"},{"name":"terminal repeat","type":"exact"}],"termid":"SO:0002201"}


id: CHEBI:75044
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phleomycin","termid":"CHEBI:75044"}


id: PBO:0074918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 88B","termid":"PBO:0074918"}


id: PBO:0005891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Tryptophan, mitochondrial","termid":"PBO:0005891"}


id: PBO:0005396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsk1 complex gamma subunit (predicted)","termid":"PBO:0005396"}


id: GO:0015464
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an acetylcholine receptor ligand and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"postsynaptic neurotransmitter receptor activity","termid":"GO:0098960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"acetylcholine receptor activity","termid":"GO:0015464"}


id: PBO:0047762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folate receptor 3 pseudogene 1","termid":"PBO:0047762"}


id: GO:0000767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The change in form (cell shape and size) that occurs during sexual reproduction in order to facilitate direct contact between the compatible mating types.","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete cell morphogenesis involved in conjugation (obsolete GO:0000767)","termid":"GO:0000767"}


id: PBO:0000586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-F0 ATPase assembly protein (predicted)","termid":"PBO:0000586"}


id: PATO:0001467
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the part of the body from which the tail arises.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curved caudal","synonyms":[{"name":"curved inferior (human torso)","type":"exact"},{"name":"curved posterior","type":"exact"}],"termid":"PATO:0001467"}


id: GO:0014837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a satellite cell becomes capable of differentiating autonomously into a myoblast regardless of its environment; upon determination, the cell fate cannot be reversed. This occurs as part of skeletal muscle regeneration. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["GOC:mtg_muscle","CL:0000056","GOC:ef","PMID:16607119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoblast fate determination","termid":"GO:0007518"},{"relation_name":"part_of","term_name":"myoblast fate commitment involved in skeletal muscle regeneration","termid":"GO:0014836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast fate determination involved in skeletal muscle regeneration","termid":"GO:0014837"}


id: PBO:0055665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LINGO1 antisense RNA 2","termid":"PBO:0055665"}


id: FYPO:0001748
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of nickel ions into a cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nickel import","termid":"FYPO:0001747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased nickel import","synonyms":[{"name":"decreased cellular nickel import","type":"exact"},{"name":"decreased nickel cation import","type":"exact"},{"name":"decreased nickel import across plasma membrane","type":"exact"},{"name":"decreased nickel import during mitotic cell cycle","type":"related"},{"name":"decreased nickel import during vegetative growth","type":"exact"},{"name":"decreased nickel import into cell","type":"exact"},{"name":"decreased nickel ion import","type":"exact"},{"name":"reduced nickel import","type":"exact"}],"termid":"FYPO:0001748"}


id: GO:0021690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the cerebellar molecular layer to attain its fully functional state. The molecular layer is the outermost layer of the cerebellar cortex. It contains the parallel fibers of the granule cells, interneurons such as stellate and basket cells, and the dendrites of the underlying Purkinje cells.","definition_xrefs":["GOC:cls","GOC:dgh","ISBN:0838580343","GOC:dph","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"cerebellar molecular layer development","termid":"GO:0021679"},{"relation_name":"part_of","term_name":"cerebellar cortex maturation","termid":"GO:0021699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar molecular layer maturation","termid":"GO:0021690"}


id: FYPO:0004740
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the position, composition or morphology of the of the actomyosin contractile ring is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal actomyosin contractile ring","synonyms":[{"name":"normal actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"normal actomyosin contractile ring during vegetative growth","type":"exact"}],"termid":"FYPO:0004740"}


id: GO:0070776
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A histone acetyltransferase complex that has histone H3 acetyltransferase and coactivator activities. Subunits of the human complex include MYST3/MOZ, MYST4/MORF, ING5, EAF6 and one of BRPF1, BRD1/BRPF2 and BRPF3.","definition_xrefs":["PMID:18794358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3 histone acetyltransferase complex","termid":"GO:0070775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"MOZ/MORF histone acetyltransferase complex","termid":"GO:0070776"}


id: SO:1000085
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variation that causes a change in the level of mature, spliced and processed RNA, resulting from a change in the corresponding DNA sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000085 sequence_variation_affecting_level_of_transcript (obsolete SO:1000085)","synonyms":[{"name":"mutation affecting level of transcript","type":"related"},{"name":"sequence variation affecting level of transcript","type":"exact"}],"termid":"SO:1000085"}


id: GO:1905315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cell proliferation that is involved in endocardial cushion morphogenesis.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GO_REF:0000060","GOC:rl","PMID:20652948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell proliferation involved in heart morphogenesis","termid":"GO:0061323"},{"relation_name":"part_of","term_name":"endocardial cushion morphogenesis","termid":"GO:0003203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in endocardial cushion morphogenesis","termid":"GO:1905315"}


id: PBO:0017746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-glucoside transmembrane transporter Sut1","termid":"PBO:0017746"}


id: PBO:0066465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C subunit 3","termid":"PBO:0066465"}


id: GO:0047337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichyl diphosphate + long-chain-polyphosphate = dolichol-phosphate + long-chain-polyphosphate.","definition_xrefs":["EC:2.7.4.20","MetaCyc:2.7.4.20-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"dolichyl-diphosphate-polyphosphate phosphotransferase activity","secondary_identifiers":["RHEA:19417"],"synonyms":[{"name":"dolichyl-diphosphate:polyphosphate phosphotransferase activity","type":"related"},{"name":"dolichylpyrophosphate:polyphosphate phosphotransferase activity","type":"related"}],"termid":"GO:0047337"}


id: PBO:0048677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine decarboxylase","termid":"PBO:0048677"}


id: PBO:0018236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit Gid4 (predicted)","termid":"PBO:0018236"}


id: PBO:0079512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin reductase 3","termid":"PBO:0079512"}


id: GO:1900825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of membrane depolarization during a cardiac muscle cell action potential.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane depolarization during action potential","termid":"GO:0098902"},{"relation_name":"regulates","term_name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane depolarization during cardiac muscle cell action potential","termid":"GO:1900825"}


id: PBO:0087685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the NuA3 histone acetyltransferase complex; this complex acetylates histone H3; contains PHD finger domain that interacts with methylated histone H3","termid":"PBO:0087685"}


id: PBO:0079814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UHRF1BP1L divergent transcript","termid":"PBO:0079814"}


id: PBO:0031594
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_transcription_during_vegetative_growth","termid":"PBO:0031594"}


id: PBO:0064958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 10","termid":"PBO:0064958"}


id: PBO:0081264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF32 antisense RNA 2","termid":"PBO:0081264"}


id: GO:0009616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A post-transcriptional gene silencing pathway mediated by the action of regulatory RNAs that protects against foreign organism invasion by restricting viral replication and dissemination.","definition_xrefs":["PMID:24732439","GOC:jl","PMID:17693253","PMID:21724934","PMID:23686236","PMID:31100912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA-mediated post-transcriptional gene silencing","termid":"GO:0035194"},{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"},{"relation_name":"is_a","term_name":"defense response to virus","termid":"GO:0051607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"RNAi-mediated antiviral immune response","secondary_identifiers":["GO:0060145","GO:0060150"],"synonyms":[{"name":"RNAi-mediated antiviral immunity","type":"exact"},{"name":"VIGS","type":"related"},{"name":"viral gene silencing in virus induced gene silencing","type":"related"},{"name":"viral triggering of virus induced gene silencing","type":"related"},{"name":"virus induced gene silencing","type":"exact"},{"name":"virus-induced PTGS","type":"exact"},{"name":"virus-induced gene silencing","type":"exact"}],"termid":"GO:0009616"}


id: PATO:0001167
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer being harmed or injured or spoiled, such that its functionality is impaired.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"damage","termid":"PATO:0001020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"damaged","termid":"PATO:0001167"}


id: PBO:0065407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha 6 pseudogene 3","termid":"PBO:0065407"}


id: GO:0019161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an alpha,omega-diamine + 2-oxoglutarate = an omega-aminoaldehyde + L-glutamate.","definition_xrefs":["EC:2.6.1.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016769"],"is_obsolete":false,"name":"diamine transaminase activity","secondary_identifiers":["MetaCyc:DIAMTRANSAM-RXN","RHEA:18217"],"synonyms":[{"name":"amine transaminase activity","type":"related"},{"name":"amine-ketoacid transaminase activity","type":"related"},{"name":"diamine aminotransferase activity","type":"exact"},{"name":"diamine-ketoglutaric transaminase activity","type":"related"},{"name":"diamine:2-oxoglutarate aminotransferase activity","type":"related"}],"termid":"GO:0019161"}


id: PBO:0066723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 20","termid":"PBO:0066723"}


id: PBO:0057669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1260b","termid":"PBO:0057669"}


id: GO:0035212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Competitive interactions within multicellular organisms between cell populations that differ in growth rates, leading to the elimination of the slowest-growing cells.","definition_xrefs":["PMID:1116643","PMID:15066286","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"is_a","term_name":"regulation of growth","termid":"GO:0040008"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell competition in a multicellular organism","termid":"GO:0035212"}


id: PBO:0005546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine kinase/uracil phosphoribosyltransferase (predicted)","termid":"PBO:0005546"}


id: GO:0061903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that starts or increases the frequency or rate of 1-phosphatidylinositol-3-kinase activity.","definition_xrefs":["GOC:aruk","PMID:18723082","GOC:bc"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of 1-phosphatidylinositol-3-kinase activity (obsolete GO:0061903)","termid":"GO:0061903"}


id: PBO:0078087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex 2 pseudogene 4","termid":"PBO:0078087"}


id: PBO:0084592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YGL046W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YGL045W","termid":"PBO:0084592"}


id: PBO:0072373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27","termid":"PBO:0072373"}


id: GO:0003994
data:
  {"annotated_genes":["SJAG_03588","SJAG_01630"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90518,109520],"is_not":false,"summary":null,"term":"GO:0003994"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: citrate = isocitrate. The reaction occurs in two steps: (1) citrate = cis-aconitate + H2O, (2) cis-aconitate + H2O = isocitrate. This reaction is the interconversion of citrate and isocitrate via the labile, enzyme-bound intermediate cis-aconitate. Water is removed from one part of the citrate molecule and added back to a different atom to form isocitrate.","definition_xrefs":["GOC:pde","GOC:vw","EC:4.2.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01630":null,"SJAG_03588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aconitate hydratase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5690911","RHEA:10336","GO:0052632","Reactome:R-HSA-70971","MetaCyc:RXN-14047"],"synonyms":[{"name":"aconitase activity","type":"exact"},{"name":"cis-aconitase activity","type":"related"},{"name":"citrate hydro-lyase activity","type":"broad"},{"name":"citrate(isocitrate) hydro-lyase (cis-aconitate-forming)","type":"related"},{"name":"citrate(isocitrate) hydro-lyase activity","type":"related"}],"termid":"GO:0003994","terms_by_termid":{"GO:0003994":null}}


id: PBO:0055822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lecithin retinol acyltransferase","termid":"PBO:0055822"}


id: PATO:0000247
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000247 proboscis extension reflex (obsolete PATO:0000247)","termid":"PATO:0000247"}


id: GO:0005587
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen heterotrimer containing type IV alpha chains; [alpha1(IV)]2alpha2(IV) trimers are commonly observed, although more type IV alpha chains exist and may be present in type IV trimers; type IV collagen triple helices associate to form 3 dimensional nets within basement membranes.","definition_xrefs":["ISBN:0721639976","PMID:19693541","PMID:21421911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"network-forming collagen trimer","termid":"GO:0098642"},{"relation_name":"is_a","term_name":"basement membrane collagen trimer","termid":"GO:0098651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type IV trimer","secondary_identifiers":["Wikipedia:Collagen_type_IV"],"termid":"GO:0005587"}


id: PBO:0039007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFF2 intronic transcript 1","termid":"PBO:0039007"}


id: PBO:0074289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT and NTRK like family member 4","termid":"PBO:0074289"}


id: PBO:0064745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 81","termid":"PBO:0064745"}


id: FYPO:0006721
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the Cdr2 medial cortical node complex does not occur.","definition_xrefs":["PomBase:mah","PMID:28924043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to Cdr2 medial cortical node complex","synonyms":[{"name":"abolished protein localisation to Cdr2 medial cortical node complex","type":"exact"},{"name":"abolished protein localization to Cdr2 medial cortical node complex during mitotic cell cycle","type":"related"},{"name":"protein absent from Cdr2 medial cortical node complex","type":"related"},{"name":"protein localization to Cdr2 medial cortical node complex abolished","type":"exact"},{"name":"protein localization to Cdr2 medial cortical node complex abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0006721"}


id: PBO:0089708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated WD repeat protein Utp15","termid":"PBO:0089708"}


id: GO:0019609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-hydroxyphenylacetate, 1,3-benzenediol monoacetate, also known as resorcinol monoacetate.","definition_xrefs":["PMID:6995433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"3-hydroxyphenylacetate metabolic process","synonyms":[{"name":"3-hydroxyphenylacetate metabolism","type":"exact"},{"name":"3HPA metabolic process","type":"exact"},{"name":"3HPA metabolism","type":"exact"}],"termid":"GO:0019609"}


id: GO:1905821
data:
  {"annotated_genes":["SJAG_01837","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112757,98443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903380"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chromosome condensation.","definition_xrefs":["GOC:bhm","GO_REF:0000058","PMID:17268547","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome condensation","termid":"GO:0060623"},{"relation_name":"is_a","term_name":"positive regulation of chromosome organization","termid":"GO:2001252"},{"relation_name":"positively_regulates","term_name":"chromosome condensation","termid":"GO:0030261"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01837":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chromosome condensation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of chromosome condensation","type":"narrow"},{"name":"activation of eukaryotic chromosome condensation","type":"narrow"},{"name":"activation of nuclear chromosome condensation","type":"narrow"},{"name":"positive regulation of eukaryotic chromosome condensation","type":"exact"},{"name":"positive regulation of nuclear chromosome condensation","type":"exact"},{"name":"up regulation of chromosome condensation","type":"exact"},{"name":"up regulation of eukaryotic chromosome condensation","type":"exact"},{"name":"up regulation of nuclear chromosome condensation","type":"exact"},{"name":"up-regulation of chromosome condensation","type":"exact"},{"name":"up-regulation of eukaryotic chromosome condensation","type":"exact"},{"name":"up-regulation of nuclear chromosome condensation","type":"exact"},{"name":"upregulation of chromosome condensation","type":"exact"},{"name":"upregulation of eukaryotic chromosome condensation","type":"exact"},{"name":"upregulation of nuclear chromosome condensation","type":"exact"}],"termid":"GO:1905821","terms_by_termid":{"GO:1903380":null}}


id: FYPO:0001690
data:
  {"alleles_by_uniquename":{"SJAG_03720:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03720","name":"tel1delta","uniquename":"SJAG_03720:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115356],"is_not":false,"summary":null,"term":"FYPO:0001690"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing camptothecin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03720":null},"genotype_count":1,"genotypes_by_uniquename":{"tel1delta":{"display_name":"tel1delta","display_uniquename":"tel1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03720:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0002058","FYPO:0000139","FYPO:0002060","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on camptothecin","references_by_uniquename":{"PMID:23090706":null},"single_locus_annotated_genes":["SJAG_03720"],"single_locus_genotype_uniquenames":["tel1delta"],"synonyms":[{"name":"normal cell population growth in presence of camptothecin","type":"exact"},{"name":"normal cell population growth on CPT","type":"exact"},{"name":"normal cell population growth on camptothecin","type":"exact"},{"name":"normal cellular response to camptothecin","type":"related"},{"name":"normal vegetative cell population growth on camptothecin","type":"exact"}],"termid":"FYPO:0001690","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0001690":null}}


id: PBO:0114276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma crystallin family protein","termid":"PBO:0114276"}


id: GO:0048906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an anterior lateral line neuromast support cell. Support cells are non-sensory cells of the neuromast that extend between the sensory hair cells from the basement membrane to the apical surface; they are surrounded by mantle cells.","definition_xrefs":["ISBN:0387968377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast support cell differentiation","termid":"GO:0048889"},{"relation_name":"part_of","term_name":"anterior lateral line neuromast development","termid":"GO:0048901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line neuromast support cell differentiation","termid":"GO:0048906"}


id: PR:O94701
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fic1 gene.","definition_xrefs":["UniProtKB:O94701","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ingression protein fic1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.18c","synonyms":[{"name":"Spom972h-fic1","type":"exact"},{"name":"cdc15-interacting C2 domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94701"}


id: GO:0018679
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dibenzothiophene 5,5-dioxide + FMNH2 + NADH + O2 = 2'-hydroxybiphenyl-2-sulfinate + FMN + H+ + H2O + NAD+.","definition_xrefs":["RHEA:12312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"dibenzothiophene sulfone monooxygenase (NADH) activity","secondary_identifiers":["UM-BBD_reactionID:r0235","EC:1.14.14.22","MetaCyc:RXN-20709"],"synonyms":[{"name":"dibenzothiophene-5,5-dioxide monooxygenase activity","type":"narrow"}],"termid":"GO:0018679"}


id: PBO:0040852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLOC1S5-TXNDC5 readthrough (NMD candidate)","termid":"PBO:0040852"}


id: GO:1904959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytochrome-c oxidase activity.","definition_xrefs":["PMID:26734017","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proton transport","termid":"GO:0010155"},{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"},{"relation_name":"is_a","term_name":"regulation of electron transfer activity","termid":"GO:1904732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0006091","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of cytochrome-c oxidase activity","synonyms":[{"name":"regulation of NADH cytochrome c oxidase","type":"exact"},{"name":"regulation of aa3-type cytochrome c oxidase","type":"narrow"},{"name":"regulation of ba3-type cytochrome c oxidase","type":"narrow"},{"name":"regulation of caa3-type cytochrome c oxidase","type":"narrow"},{"name":"regulation of cbb3-type cytochrome c oxidase","type":"narrow"},{"name":"regulation of complex IV (mitochondrial electron transport) activity","type":"related"},{"name":"regulation of cytochrome a3 activity","type":"narrow"},{"name":"regulation of cytochrome aa3 activity","type":"narrow"},{"name":"regulation of cytochrome c oxidase activity","type":"exact"},{"name":"regulation of cytochrome oxidase activity","type":"related"},{"name":"regulation of ferrocytochrome c oxidase","type":"narrow"},{"name":"regulation of ferrocytochrome-c:oxygen oxidoreductase","type":"narrow"},{"name":"regulation of indophenol oxidase","type":"narrow"},{"name":"regulation of indophenolase","type":"narrow"},{"name":"regulation of warburg's respiratory enzyme activity","type":"related"}],"termid":"GO:1904959"}


id: PBO:0035815
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_acetylation_during_vegetative_growth","termid":"PBO:0035815"}


id: PBO:0063368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proprotein convertase subtilisin/kexin type 7","termid":"PBO:0063368"}


id: PBO:0031123
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_ammonia_nitrogen_source","termid":"PBO:0031123"}


id: PATO:0002367
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Male quality of being incapable to reproduce because of functional loss of the testicles from surgical removal or chemical means.","definition_xrefs":["PATOC:MF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male","termid":"PATO:0000384"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"castrated male","termid":"PATO:0002367"}


id: PBO:0035934
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_lysine_methylation_during_vegetative_growth","termid":"PBO:0035934"}


id: GO:0046451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving diaminopimelate, the anion of the dicarboxylic acid 2,6-diaminoheptanedioic acid. It is an intermediate in lysine biosynthesis and as a component (as meso-diaminopimelate) of the peptidoglycan of Gram-negative bacterial cell walls.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid metabolic process","termid":"GO:0006520"},{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"diaminopimelate metabolic process","synonyms":[{"name":"diaminopimelate metabolism","type":"exact"}],"termid":"GO:0046451"}


id: PBO:0085294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pheromone-regulated protein; contains 3 predicted transmembrane segments and an FF sequence, a motif involved in COPII binding; member of DUP240 gene family; PRM9 has a paralog, PRM8, that arose from a segmental duplication","termid":"PBO:0085294"}


id: GO:0061057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of peptidoglycan to a receptor and ending with regulation of a downstream cellular process. The main outcome of the Imd signaling is the production of antimicrobial peptides.","definition_xrefs":["PMID:18688280","PMID:24706930","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor signaling pathway","termid":"GO:0002221"},{"relation_name":"part_of","term_name":"defense response to bacterium","termid":"GO:0042742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"peptidoglycan recognition protein signaling pathway","synonyms":[{"name":"Imd signaling pathway","type":"exact"},{"name":"Imd signalling pathway","type":"exact"},{"name":"PGRP signaling pathway","type":"related"},{"name":"immune deficiency pathway","type":"related"},{"name":"immune deficiency signaling pathway","type":"related"}],"termid":"GO:0061057"}


id: GO:1990259
data:
  {"annotated_genes":["SJAG_00943","SJAG_02350"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104150,106256],"is_not":false,"summary":null,"term":"GO:1990259"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (histone H2A)-glutamine (position 104) = S-adenosyl-L-homocysteine + (histone H2A)-N5-methyl-glutamine (position 104). Note that this corresponds to Q105 in yeast.","definition_xrefs":["PMID:24352239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-glutamine N-methyltransferase activity","termid":"GO:0036009"},{"relation_name":"is_a","term_name":"histone H2A methyltransferase activity","termid":"GO:0140940"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00943":null,"SJAG_02350":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0008276","GO:0016740","GO:0016741","GO:0140096"],"is_obsolete":false,"name":"histone H2AQ104 methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone glutamine N-methyltransferase activity","type":"broad"},{"name":"histone glutamine methylase activity","type":"exact"},{"name":"histone glutamine methyltransferase activity","type":"exact"},{"name":"histone-glutamine N-methyltransferase activity","type":"exact"},{"name":"histone-glutamine methyltransferase activity","type":"exact"}],"termid":"GO:1990259","terms_by_termid":{"GO:1990259":null}}


id: PBO:0018117
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translin-associated Factor X","termid":"PBO:0018117"}


id: FYPO:0007983
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed during mitotic interphase in which some microtubule bundles are not anchored to the nuclear membrane. See PMID:15068790","definition_xrefs":["PomBase:mlr","PMID:15068790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000054","FYPO:0002399","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"microtubule bundles detached from the nuclear envelope","termid":"FYPO:0007983"}


id: GO:0019024
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A viral genome composed of single stranded RNA of either positive or negative sense.","definition_xrefs":["ISBN:0121585336"],"gene_count":0,"genotype_count":0,"name":"obsolete ssRNA viral genome (obsolete GO:0019024)","termid":"GO:0019024"}


id: PBO:0066079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 7","termid":"PBO:0066079"}


id: GO:1901279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of D-ribose 5-phosphate.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"},{"relation_name":"is_a","term_name":"D-ribose 5-phosphate metabolic process","termid":"GO:1901278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"D-ribose 5-phosphate catabolic process","synonyms":[{"name":"D-ribose 5-phosphate breakdown","type":"exact"},{"name":"D-ribose 5-phosphate catabolism","type":"exact"},{"name":"D-ribose 5-phosphate degradation","type":"exact"}],"termid":"GO:1901279"}


id: FYPO:0007120
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of cell cycle arrest in response to leucine starvation does not occur; arrest normally occurs in G1 phase.","definition_xrefs":["PomBase:mah","PMID:31456006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal occurrence of normal mitotic cell cycle arrest","termid":"FYPO:0001026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abolished cell cycle arrest in mitotic G1 phase in response to leucine starvation","synonyms":[{"name":"abolished cell cycle arrest in mitotic G1 phase during cellular response to leucine starvation","type":"exact"},{"name":"abolished cell cycle arrest in mitotic G1 phase in response to leucine depletion","type":"exact"},{"name":"abolished cell cycle arrest in mitotic G1 phase in response to leucine deprivation","type":"exact"},{"name":"abolished leucine deprivation-induced G1 arrest","type":"exact"},{"name":"abolished mitotic G1 arrest in response to leucine starvation","type":"exact"},{"name":"abolished mitotic cell cycle arrest in G1 phase in response to leucine starvation","type":"exact"},{"name":"cell cycle arrest in mitotic G1 phase in response to leucine starvation abolished","type":"exact"}],"termid":"FYPO:0007120"}


id: PBO:0072956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stearoyl-CoA desaturase pseudogene 1","termid":"PBO:0072956"}


id: GO:0031093
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of the platelet alpha granule.","definition_xrefs":["GOC:mah","PMID:8467233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule lumen","termid":"GO:0034774"},{"relation_name":"part_of","term_name":"platelet alpha granule","termid":"GO:0031091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"platelet alpha granule lumen","synonyms":[{"name":"platelet alpha-granule lumen","type":"exact"}],"termid":"GO:0031093"}


id: FYPO:0003218
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the modification of a wobble base uridine residue in a tRNA to 5-methoxycarbonylmethyl-2-thiouridine is abolished.","definition_xrefs":["PomBase:mah","GO:0002926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished RNA modification","termid":"FYPO:0000371"},{"relation_name":"is_a","term_name":"abnormal tRNA modification","termid":"FYPO:0001765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"abolished tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridine biosynthesis","synonyms":[{"name":"abolished mcm5s2U34 biosynthesis","type":"exact"},{"name":"abolished tRNA U34 5-methoxycarbonylmethyl-2-thiouridine biosynthesis","type":"exact"},{"name":"abolished tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridine biosynthesis during mitotic cell cycle","type":"related"},{"name":"abolished tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridine biosynthesis during vegetative growth","type":"exact"},{"name":"abolished thiolation and methoxycarbonylmethylation at tRNA U34","type":"exact"},{"name":"tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridine biosynthesis abolished","type":"exact"}],"termid":"FYPO:0003218"}


id: GO:0098997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of a viral membrane with the host cell outer membrane during viral entry.","definition_xrefs":["GOC:dos","VZ:3941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fusion of virus membrane with host plasma membrane","termid":"GO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"fusion of virus membrane with host outer membrane","synonyms":[{"name":"fusion of viral membrane with host outer membrane","type":"related"},{"name":"viral envelope fusion","type":"broad"},{"name":"viral envelope fusion with host outer membrane","type":"exact"},{"name":"viral penetration via membrane fusion","type":"broad"},{"name":"viral-cell fusion molecule activity","type":"related"}],"termid":"GO:0098997"}


id: PBO:0043814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copine 5","termid":"PBO:0043814"}


id: GO:0032407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a MutSalpha mismatch repair complex.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex binding","termid":"GO:0032404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"MutSalpha complex binding","termid":"GO:0032407"}


id: PR:O13969
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24C9.09 gene.","definition_xrefs":["UniProtKB:O13969","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.09","synonyms":[{"name":"Spom972h-SPAC24C9.09","type":"exact"},{"name":"ThrRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"threonyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13969"}


id: PBO:0083114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase IV; undergoes pair-wise interactions with Dnl4p-Lif1p and Rad27p to mediate repair of DNA double-strand breaks by non-homologous end joining (NHEJ); homologous to mammalian DNA polymerase beta","termid":"PBO:0083114"}


id: PBO:0109374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 7B","termid":"PBO:0109374"}


id: PBO:0084512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of an oxysterol-binding protein family with seven members; in S. cerevisiae, family members have overlapping, redundant functions in sterol metabolism and collectively perform a function essential for viability; contains FFAT motif; interacts with ER anchor Scs2p at patches at the plasma membrane and at the nuclear envelope; regulated by sterol binding; OSH2 has a paralog, SWH1, that arose from the whole genome duplication","termid":"PBO:0084512"}


id: FYPO:0005217
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a proteasome to the nuclear periphery is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nuclear periphery","termid":"FYPO:0002338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased proteasome localization to nuclear periphery","synonyms":[{"name":"increased proteasome localisation to nuclear periphery","type":"related"},{"name":"increased proteasome localization to nuclear periphery during mitotic cell cycle","type":"related"},{"name":"increased proteasome localization to nuclear periphery during vegetative growth","type":"exact"}],"termid":"FYPO:0005217"}


id: PBO:0044494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 51 subfamily A member 1 pseudogene 2","termid":"PBO:0044494"}


id: PBO:0069762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1045, pseudogene","termid":"PBO:0069762"}


id: PBO:0057089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 185","termid":"PBO:0057089"}


id: GO:0072716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an actinomycin D stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to antibiotic","termid":"GO:0046677"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to actinomycin D","termid":"GO:0072716"}


id: GO:0071266
data:
  {"annotated_genes":["SJAG_03102","SJAG_02972","SJAG_03671","SJAG_02290","SJAG_00395"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64687,106560,107148],"is_not":false,"summary":null,"term":"GO:0071266"},{"annotations":[96730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[99662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019281"},{"annotations":[110005],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019279"},{"annotations":[106562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019283"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-methionine, the L-enantiomer of (2S)-2-amino-4-(methylsulfanyl)butanoic acid, from simpler components.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine biosynthetic process","termid":"GO:0071265"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00395":null,"SJAG_02290":null,"SJAG_02972":null,"SJAG_03102":null,"SJAG_03671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520","GO:0006790"],"is_obsolete":false,"name":"'de novo' L-methionine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"'de novo' L-methionine anabolism","type":"exact"},{"name":"'de novo' L-methionine biosynthesis","type":"exact"},{"name":"'de novo' L-methionine formation","type":"exact"},{"name":"'de novo' L-methionine synthesis","type":"exact"}],"termid":"GO:0071266","terms_by_termid":{"GO:0019279":null,"GO:0019280":null,"GO:0019281":null,"GO:0019283":null,"GO:0071266":null}}


id: PBO:0089688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase alpha subunit","termid":"PBO:0089688"}


id: GO:0060616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the mammary gland cord forms by elongation of the mammary bud. The cord is formed once the elongating bud breaks through the mesenchyme and reaches the fat pad.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"is_a","term_name":"epithelial tube formation","termid":"GO:0072175"},{"relation_name":"part_of","term_name":"mammary gland cord morphogenesis","termid":"GO:0060652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland cord formation","synonyms":[{"name":"mammary gland sprout formation","type":"exact"}],"termid":"GO:0060616"}


id: GO:0033995
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-acetylneuraminate glycoside = 2,7-anhydro-alpha-N-acetylneuraminate + an alpha-sialyl group. This reaction is the elimination of alpha-sialyl groups in N-acetylneuraminic acid glycosides, releasing 2,7-anhydro-alpha-N-acetylneuraminate.","definition_xrefs":["EC:4.2.2.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"anhydrosialidase activity","secondary_identifiers":["MetaCyc:4.2.2.15-RXN"],"synonyms":[{"name":"anhydroneuraminidase activity","type":"related"},{"name":"glycoconjugate sialyl-lyase (2,7-cyclizing) activity","type":"related"},{"name":"sialglycoconjugate N-acylneuraminylhydrolase (2,7-cyclizing) activity","type":"related"},{"name":"sialidase L activity","type":"related"}],"termid":"GO:0033995"}


id: PATO:0001009
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001009 relative latency value (obsolete PATO:0001009)","termid":"PATO:0001009"}


id: PBO:0091300
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retention of intron IV leads to production of tandem hydrolase/cardiolipin fusion protein","termid":"PBO:0091300"}


id: PBO:0084360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-homoserine-O-acetyltransferase; catalyzes the conversion of homoserine to O-acetyl homoserine which is the first step of the methionine biosynthetic pathway","termid":"PBO:0084360"}


id: PBO:0055659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3099","termid":"PBO:0055659"}


id: PBO:0058396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4768","termid":"PBO:0058396"}


id: GO:1900545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of phenotypic switching.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900545)","synonyms":[{"name":"regulation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"}],"termid":"GO:1900545"}


id: GO:0002834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a response to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"regulates","term_name":"response to tumor cell","termid":"GO:0002347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to tumor cell","synonyms":[{"name":"regulation of response to tumour cell","type":"exact"}],"termid":"GO:0002834"}


id: PBO:0049283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 2","termid":"PBO:0049283"}


id: PBO:0001913
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe iNhibitor of Growth","termid":"PBO:0001913"}


id: GO:0030686
data:
  {"annotated_genes":["SJAG_04979","SJAG_01272","SJAG_04346","SJAG_00245","SJAG_01799","SJAG_00538","SJAG_02300","SJAG_01877","SJAG_00879","SJAG_02759","SJAG_04033","SJAG_03931","SJAG_03252","SJAG_04339","SJAG_01169","SJAG_02372","SJAG_02681","SJAG_00965","SJAG_00572","SJAG_03156","SJAG_00838","SJAG_04847","SJAG_02250","SJAG_01494","SJAG_01115","SJAG_04069","SJAG_04224","SJAG_03846","SJAG_01275","SJAG_05187","SJAG_00882","SJAG_03617","SJAG_02830","SJAG_05186","SJAG_03654","SJAG_00142"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71827,74739,88656,89463,93928,95871,96268,97624,103014,103079,107110,109135,111263,111785,112822],"is_not":false,"summary":null,"term":"GO:0030686"},{"annotations":[89746,87729,87559],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034457"},{"annotations":[84002,93941,88051],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030690"},{"annotations":[106148,99712],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030692"},{"annotations":[102043,96461,106863],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070545"},{"annotations":[111133,106023,103154,107836,103936],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034388"},{"annotations":[104458,108055,108137,89793,87233],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034456"}]},"cv_name":"cellular_component","definition":"A large ribonucleoprotein complex considered to be the earliest preribosomal complex. In S. cerevisiae, it has a size of 90S and consists of the 35S pre-rRNA, early-associating ribosomal proteins most of which are part of the small ribosomal subunit, the U3 snoRNA and associated proteins.","definition_xrefs":["GOC:krc","GOC:vw","PMID:15120992","PMID:12957375","PMID:12150911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preribosome","termid":"GO:0030684"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_00245":null,"SJAG_00538":null,"SJAG_00572":null,"SJAG_00838":null,"SJAG_00879":null,"SJAG_00882":null,"SJAG_00965":null,"SJAG_01115":null,"SJAG_01169":null,"SJAG_01272":null,"SJAG_01275":null,"SJAG_01494":null,"SJAG_01799":null,"SJAG_01877":null,"SJAG_02250":null,"SJAG_02300":null,"SJAG_02372":null,"SJAG_02681":null,"SJAG_02759":null,"SJAG_02830":null,"SJAG_03156":null,"SJAG_03252":null,"SJAG_03617":null,"SJAG_03654":null,"SJAG_03846":null,"SJAG_03931":null,"SJAG_04033":null,"SJAG_04069":null,"SJAG_04224":null,"SJAG_04339":null,"SJAG_04346":null,"SJAG_04847":null,"SJAG_04979":null,"SJAG_05186":null,"SJAG_05187":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030684"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0030684","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"90S preribosome","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030686","terms_by_termid":{"GO:0030686":null,"GO:0030690":null,"GO:0030692":null,"GO:0034388":null,"GO:0034456":null,"GO:0034457":null,"GO:0070545":null}}


id: PR:Q9UUN5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A prenylated Rab acceptor protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04300","PANTHER:PTHR19317:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRA1-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.02c","secondary_identifiers":["UniProtKB:Q9UUN5"],"synonyms":[{"name":"Spom972h-RABAC1","type":"exact"}],"termid":"PR:Q9UUN5"}


id: PBO:0052561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase 2A","termid":"PBO:0052561"}


id: GO:0051166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2,5-dihydroxypyridine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2,5-dihydroxypyridine metabolic process","termid":"GO:0051165"},{"relation_name":"is_a","term_name":"pyridine-containing compound catabolic process","termid":"GO:0072526"},{"relation_name":"is_a","term_name":"organic hydroxy compound catabolic process","termid":"GO:1901616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2,5-dihydroxypyridine catabolic process","synonyms":[{"name":"2,5-dihydroxypyridine breakdown","type":"exact"},{"name":"2,5-dihydroxypyridine catabolism","type":"exact"},{"name":"2,5-dihydroxypyridine degradation","type":"exact"},{"name":"pyridine-2,5-diol catabolic process","type":"exact"}],"termid":"GO:0051166"}


id: GO:1904270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a pyroptosome complex.","definition_xrefs":["PMID:17964261","GO_REF:0000079","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"pyroptosome complex assembly","synonyms":[{"name":"ASC pyroptosome assembly","type":"exact"},{"name":"ASC pyroptosome formation","type":"exact"},{"name":"pyroptosome complex formation","type":"exact"}],"termid":"GO:1904270"}


id: PBO:0042004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 59","termid":"PBO:0042004"}


id: PBO:0070253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 196 pseudogene","termid":"PBO:0070253"}


id: GO:0075343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of abscisic acid in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of abscisic acid levels in host (obsolete GO:0075343)","termid":"GO:0075343"}


id: PR:O59829
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC965.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrilase C965.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.09","synonyms":[{"name":"Spom972h-SPCC965.09","type":"exact"}],"termid":"PR:O59829"}


id: PBO:0062756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily N member 1","termid":"PBO:0062756"}


id: FYPO:0004127
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 4 of histone H3 at protein-coding genes occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002330"},{"relation_name":"is_a","term_name":"decreased histone H3-K4 dimethylation during vegetative growth","termid":"FYPO:0002367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3-K4 dimethylation at protein coding gene during vegetative growth","synonyms":[{"name":"decreased histone H3 K4 dimethylation at protein coding gene during vegetative growth","type":"exact"},{"name":"decreased histone H3-K4 dimethylation at protein coding gene during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K4 dimethylation at protein coding gene during vegetative growth","type":"exact"},{"name":"decreased histone H3K4me2 at protein coding gene during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K4 dimethylation at protein coding gene during vegetative growth","type":"exact"},{"name":"reduced histone H3-K4 dimethylation at protein coding gene during vegetative growth","type":"exact"}],"termid":"FYPO:0004127"}


id: GO:0050776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"immune response","termid":"GO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of immune response","termid":"GO:0050776"}


id: PBO:0071986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 15","termid":"PBO:0071986"}


id: PR:P87240
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- not2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general negative regulator of transcription subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.15c","synonyms":[{"name":"Spom972h-not2","type":"exact"}],"termid":"PR:P87240"}


id: PBO:0085582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in 7-aminocholesterol resistance; has seven potential membrane-spanning regions; expression is induced under both low-heme and low-oxygen conditions; member of the fungal lipid-translocating exporter (LTE) family of protein; RTA1 has a paralog, YLR046C, that arose from the whole genome duplication","termid":"PBO:0085582"}


id: PBO:0043817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copine 8","termid":"PBO:0043817"}


id: PBO:0053926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1224","termid":"PBO:0053926"}


id: PBO:0028782
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transposable_element-derived_small_RNA_level","termid":"PBO:0028782"}


id: PBO:0034433
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromosome_morphology_during_vegetative_growth","termid":"PBO:0034433"}


id: PBO:0087188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase subunit ABC14.5; common to RNA polymerases I, II, and III","termid":"PBO:0087188"}


id: PBO:0052683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 51","termid":"PBO:0052683"}


id: FYPO:0007877
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype observed in the vegetative growth phase of the life cycle in which regulation of translation in response to a chemical stimulus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:34296454"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation regulation phenotype during vegetative growth","termid":"FYPO:0005044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal regulation of translation in response to chemical","synonyms":[{"name":"normal regulation of translation in response to chemical during mitotic cell cycle","type":"related"},{"name":"normal regulation of translation in response to chemical during vegetative growth","type":"exact"},{"name":"normal regulation of translation in response to chemical stimulus","type":"exact"},{"name":"normal translational regulation in response to chemical","type":"exact"}],"termid":"FYPO:0007877"}


id: GO:0018786
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-haloalkane + H2O = a primary alcohol + halide.","definition_xrefs":["RHEA:19081","PMID:3624201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"haloalkane dehalogenase activity","secondary_identifiers":["EC:3.8.1.5","MetaCyc:HALOALKANE-DEHALOGENASE-RXN","UM-BBD_enzymeID:r0001"],"synonyms":[{"name":"1-chlorohexane halidohydrolase activity","type":"related"},{"name":"1-haloalkane dehalogenase activity","type":"related"},{"name":"1-haloalkane halidohydrolase activity","type":"related"}],"termid":"GO:0018786"}


id: PBO:0029843
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_acetylation","termid":"PBO:0029843"}


id: GO:0050398
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a wax ester + H2O = a long-chain alcohol + a long-chain carboxylate.","definition_xrefs":["MetaCyc:WAX-ESTER-HYDROLASE-RXN","EC:3.1.1.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"wax-ester hydrolase activity","secondary_identifiers":["RHEA:13577"],"synonyms":[{"name":"WEH","type":"related"},{"name":"jojoba wax esterase","type":"narrow"},{"name":"wax-ester acylhydrolase activity","type":"related"}],"termid":"GO:0050398"}


id: GO:0036310
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An ATP-dependent activity that facilitates the formation of a complementary double-stranded DNA molecule.","definition_xrefs":["PMID:21078962","PMID:22705370","PMID:22759634","PMID:22704558","PMID:22888405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"},{"relation_name":"is_a","term_name":"DNA/DNA annealing activity","termid":"GO:1990814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"ATP-dependent DNA/DNA annealing activity","synonyms":[{"name":"ATP-dependent DNA annealing activity","type":"related"},{"name":"DNA rewinding activity","type":"related"},{"name":"annealing helicase activity","type":"related"},{"name":"nucleoside-triphosphatase activity involved in DNA annealing","type":"exact"}],"termid":"GO:0036310"}


id: PBO:0044634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA cross-link repair 1B","termid":"PBO:0044634"}


id: PBO:0091556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"But2 family protein, similar to cell surface molecules","termid":"PBO:0091556"}


id: PBO:0065228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 9","termid":"PBO:0065228"}


id: PBO:0043205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"creatine kinase, mitochondrial 2","termid":"PBO:0043205"}


id: PBO:0040207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASTN2 antisense RNA 1","termid":"PBO:0040207"}


id: SO:0000945
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that results from recombination between attP_site and attB_site, composed of the 5' portion of attP_site and the 3' portion of attB_site.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integration_excision_site","termid":"SO:0000946"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attR_site","synonyms":[{"name":"attPB'","type":"related"},{"name":"attR site","type":"exact"}],"termid":"SO:0000945"}


id: GO:0003017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The flow of lymph through the body of an animal.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circulatory system process","termid":"GO:0003013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymph circulation","termid":"GO:0003017"}


id: GO:0140048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of manganese ions from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["PMID:25319704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese ion transmembrane transport","termid":"GO:0071421"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"manganese ion export across plasma membrane","synonyms":[{"name":"manganese ion export from cell","type":"exact"}],"termid":"GO:0140048"}


id: PBO:0041566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 open reading frame 96","termid":"PBO:0041566"}


id: PBO:0026947
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_transcription_during_meiotic_cell_cycle","termid":"PBO:0026947"}


id: PBO:0061401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natriuretic peptide receptor 2","termid":"PBO:0061401"}


id: PBO:0086261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates phospholipid asymmetry at plasma membrane; may act to generate normal levels of PI4P; may act together with or upstream of Stt4p; at least partially mediates proper localization of Stt4p to the plasma membrane","termid":"PBO:0086261"}


id: PR:Q10323
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- imt3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phosphoceramide mannosyltransferase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.11c","synonyms":[{"name":"IPC mannosyltransferase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-imt3","type":"exact"}],"termid":"PR:Q10323"}


id: PBO:0045429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dpy-19 like C-mannosyltransferase 1","termid":"PBO:0045429"}


id: PR:Q9UU81
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- apl4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UU81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-1 complex subunit gamma-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP1E11.06","synonyms":[{"name":"Spom972h-apl4","type":"exact"},{"name":"clathrin assembly protein complex 1 gamma-1 large chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin assembly protein large gamma-1 chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"gamma-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UU81"}


id: PBO:0073124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC11 homolog B, signal peptidase complex subunit (pseudogene)","termid":"PBO:0073124"}


id: FYPO:0002062
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the growth of a cell is normal (i.e. indistinguishable from wild type). Cell growth is the process in which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present.","definition_xrefs":["GO:0016049","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cell growth","termid":"FYPO:0002062"}


id: PBO:0040831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BIRC6 antisense RNA 1","termid":"PBO:0040831"}


id: PBO:0078787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 11-1","termid":"PBO:0078787"}


id: PBO:0059470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"musashi RNA binding protein 2","termid":"PBO:0059470"}


id: PBO:0045558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 8 pseudogene 2","termid":"PBO:0045558"}


id: PBO:0049592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 10","termid":"PBO:0049592"}


id: GO:0048367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the shoot system over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"shoot system development","secondary_identifiers":["GO:0022621"],"synonyms":[{"name":"shoot development","type":"exact"}],"termid":"GO:0048367"}


id: PBO:0061047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPAL2 antisense RNA 1","termid":"PBO:0061047"}


id: FYPO:0001656
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of asparagine into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal amino acid import during vegetative growth","termid":"FYPO:0001361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal asparagine import","synonyms":[{"name":"abnormal L-asparagine import","type":"exact"},{"name":"abnormal L-asparagine import across plasma membrane","type":"exact"},{"name":"abnormal asparagine import during mitotic cell cycle","type":"related"},{"name":"abnormal asparagine import during vegetative growth","type":"exact"},{"name":"abnormal asparagine import into cell","type":"exact"},{"name":"abnormal asparagine uptake","type":"exact"}],"termid":"FYPO:0001656"}


id: PBO:0044160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTDSPL2 divergent transcript","termid":"PBO:0044160"}


id: PBO:0066189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 11 pseudogene 1","termid":"PBO:0066189"}


id: PBO:0050664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 2","termid":"PBO:0050664"}


id: GO:0031919
data:
  {"annotated_genes":["SJAG_03652","SJAG_03808","SJAG_02962","SJAG_02152"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86198,113547,114814,86199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903090"},{"annotations":[86201,114815,86200,113548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903091"},{"annotations":[86202,86203,113549,114816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903092"}]},"cv_name":"biological_process","definition":"The directed movement of any of the vitamin B6 compounds -- pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate -- into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin transport","termid":"GO:0051180"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02152":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"vitamin B6 transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031919","terms_by_termid":{"GO:1903090":null,"GO:1903091":null,"GO:1903092":null}}


id: GO:0033828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + ADP-glucose = 2-O-(beta-D-glucosyl)-sn-glycerol 3-phosphate + ADP + H+.","definition_xrefs":["RHEA:12881","EC:2.4.1.213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"glucosylglycerol-phosphate synthase activity","secondary_identifiers":["MetaCyc:2.4.1.213-RXN","KEGG_REACTION:R05328"],"synonyms":[{"name":"ADP-glucose:sn-glycerol-3-phosphate 2-beta-D-glucosyltransferase activity","type":"related"},{"name":"ADPglucose:sn-glycerol-3-phosphate 2-beta-D-glucosyltransferase activity","type":"related"},{"name":"GG-phosphate synthase activity","type":"related"},{"name":"GGPS","type":"related"},{"name":"glucosyl-glycerol-phosphate synthase activity","type":"related"}],"termid":"GO:0033828"}


id: PBO:0054401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1797","termid":"PBO:0054401"}


id: FYPO:0003441
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to all or part of the actin cytoskeleton is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cytoskeleton during vegetative growth","termid":"FYPO:0003184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to actin cytoskeleton during vegetative growth","synonyms":[{"name":"normal protein localisation to actin cytoskeleton during vegetative growth","type":"exact"},{"name":"normal protein localization to actin cytoskeleton during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003441"}


id: GO:0010245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of radial microtubular systems during male meiotic cytokinesis in plants.","definition_xrefs":["GOC:syr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0007010"],"is_obsolete":false,"name":"radial microtubular system formation","termid":"GO:0010245"}


id: GO:0070157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling proline to prolyl-tRNA in a mitochondrion, catalyzed by prolyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prolyl-tRNA aminoacylation","termid":"GO:0006433"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399","GO:0140053","GO:0006520"],"is_obsolete":false,"name":"mitochondrial prolyl-tRNA aminoacylation","termid":"GO:0070157"}


id: PBO:0030413
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_cellular_response_to_purvalanol_A","termid":"PBO:0030413"}


id: PBO:0064931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPARG related coactivator 1","termid":"PBO:0064931"}


id: PBO:0051232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-30-21 (pseudogene)","termid":"PBO:0051232"}


id: PBO:0002127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTA1-like protein","termid":"PBO:0002127"}


id: SO:0002275
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Short interspersed elements that originated from 7SL RNAs.","definition_xrefs":["PMID:21673742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SINE_element","termid":"SO:0000206"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"7SL_SINE_retrotransposon","synonyms":[{"name":"7SL SINE element","type":"exact"},{"name":"7SL SINE retrotransposon","type":"exact"},{"name":"RSL retrotransposon","type":"exact"}],"termid":"SO:0002275"}


id: FYECO:0000414
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing xylose as the carbon source, yeast extract and other components. The concentration of xylose is typically around 2%.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylose YE","synonyms":[{"name":"xylose rich medium","type":"broad"}],"termid":"FYECO:0000414"}


id: GO:0090446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the consistent predetermined time point at which a nematode larva progresses from an initial condition to a later condition and decreases the rate at which this time point is reached.","definition_xrefs":["PMID:17550772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of development, heterochronic","termid":"GO:0045961"},{"relation_name":"is_a","term_name":"negative regulation of nematode larval development","termid":"GO:0061064"},{"relation_name":"is_a","term_name":"regulation of nematode larval development, heterochronic","termid":"GO:0090444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nematode larval development, heterochronic","termid":"GO:0090446"}


id: PBO:0064428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patatin like phospholipase domain containing 5","termid":"PBO:0064428"}


id: GO:0046366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of allose, allo-hexose, an aldohexose similar to glucose, differing only in the configuration of the hydroxyl group of C-3.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete allose biosynthetic process (obsolete GO:0046366)","synonyms":[{"name":"allose anabolism","type":"exact"},{"name":"allose biosynthesis","type":"exact"},{"name":"allose formation","type":"exact"},{"name":"allose synthesis","type":"exact"}],"termid":"GO:0046366"}


id: PBO:0026826
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_DNA_strand_elongation_involved_in_mitotic_DNA_replication","termid":"PBO:0026826"}


id: _global:similar_in_magnitude_relative_to
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"q1 similar_in_magnitude_relative_to q2 if and only if magnitude(q1) =~ magnitude(q2). Here, magnitude(q) is a function that maps a quality to a unit-invariant scale.","definition_xrefs":["PATOC:CJM"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"similar_in_magnitude_relative_to","termid":"_global:similar_in_magnitude_relative_to"}


id: GO:0005689
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any spliceosomal complex that forms during the splicing of a messenger RNA primary transcript to excise an intron; the series of U12-type spliceosomal complexes is involved in the splicing of the majority of introns that contain atypical AT-AC terminal dinucleotides, as well as other non-canonical introns. The entire splice site signal, not just the terminal dinucleotides, is involved in determining which spliceosome utilizes the site.","definition_xrefs":["GOC:mah","PMID:11971955","PMID:11574683","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal complex","termid":"GO:0005681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"U12-type spliceosomal complex","secondary_identifiers":["Wikipedia:Minor_spliceosome"],"synonyms":[{"name":"AT-AC spliceosomal complex","type":"narrow"},{"name":"minor (U12-type) spliceosomal complex","type":"exact"},{"name":"minor spliceosomal complex","type":"exact"}],"termid":"GO:0005689"}


id: GO:1904055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cholangiocyte proliferation.","definition_xrefs":["GOC:TermGenie","PMID:24434010","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"regulation of cholangiocyte proliferation","termid":"GO:1904054"},{"relation_name":"negatively_regulates","term_name":"cholangiocyte proliferation","termid":"GO:1990705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cholangiocyte proliferation","synonyms":[{"name":"down regulation of cholangiocyte proliferation","type":"exact"},{"name":"down regulation of hepatoblast proliferation","type":"exact"},{"name":"down-regulation of cholangiocyte proliferation","type":"exact"},{"name":"down-regulation of hepatoblast proliferation","type":"exact"},{"name":"downregulation of cholangiocyte proliferation","type":"exact"},{"name":"downregulation of hepatoblast proliferation","type":"exact"},{"name":"inhibition of cholangiocyte proliferation","type":"narrow"},{"name":"inhibition of hepatoblast proliferation","type":"narrow"},{"name":"negative regulation of hepatoblast proliferation","type":"exact"}],"termid":"GO:1904055"}


id: PBO:0075550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm flagellar 2","termid":"PBO:0075550"}


id: PBO:0057366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ai","termid":"PBO:0057366"}


id: PBO:0000087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"truncated C terminal region of membrane transporter","termid":"PBO:0000087"}


id: PBO:0062639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily K member 1B pseudogene","termid":"PBO:0062639"}


id: PBO:0111349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit processome, U3 snoRNP-associated protein Utp10","termid":"PBO:0111349"}


id: FYPO:0004126
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 4 of histone H3 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished histone H3-K4 trimethylation during vegetative growth","synonyms":[{"name":"abolished histone H3 K4 trimethylation during vegetative growth","type":"exact"},{"name":"abolished histone H3-K4 trimethylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K4me3 during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K4 trimethylation during vegetative growth","type":"exact"},{"name":"histone H3-K4 trimethylation abolished during vegetative growth","type":"exact"},{"name":"histone H3-K4 trimethylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0004126"}


id: PBO:0052066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine acetyltransferase 6B","termid":"PBO:0052066"}


id: PBO:0089388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S8","termid":"PBO:0089388"}


id: GO:1904798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of core promoter binding.","definition_xrefs":["GO_REF:0000059","PMID:22723415","GOC:BHF_telomere","GOC:BHF","GOC:TermGenie","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of core promoter binding","termid":"GO:1904796"},{"relation_name":"is_a","term_name":"positive regulation of transcription regulatory region DNA binding","termid":"GO:2000679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of core promoter binding","synonyms":[{"name":"activation of core promoter binding","type":"narrow"},{"name":"up regulation of core promoter binding","type":"exact"},{"name":"up-regulation of core promoter binding","type":"exact"},{"name":"upregulation of core promoter binding","type":"exact"}],"termid":"GO:1904798"}


id: PBO:0063308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycomb group ring finger 2","termid":"PBO:0063308"}


id: PBO:0061248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide synthase 2","termid":"PBO:0061248"}


id: GO:0048931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a glial cell in the posterior lateral line nerve.","definition_xrefs":["PMID:15832385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve glial cell differentiation","termid":"GO:0048895"},{"relation_name":"part_of","term_name":"posterior lateral line nerve development","termid":"GO:0048918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line nerve glial cell differentiation","termid":"GO:0048931"}


id: GO:0098778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The secretion of soluble curli subunits through the outer membrane, coupled to nucleation of curli fiber formation at the membrane surface.","definition_xrefs":["PMID:24080089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion by the type VIII secretion system","termid":"GO:0098777"},{"relation_name":"part_of","term_name":"curli assembly","termid":"GO:0098775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"curli subunit secretion coupled to curli assembly","synonyms":[{"name":"extracellular nucleation-precipitation pathway","type":"exact"}],"termid":"GO:0098778"}


id: PBO:0018104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"name description Alpha Amylase Homolog","termid":"PBO:0018104"}


id: GO:0110042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of nematode pharynx morphogenesis.","definition_xrefs":["PMID:20805556","GOC:rz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nematode pharynx morphogenesis","termid":"GO:0110041"},{"relation_name":"is_a","term_name":"negative regulation of animal organ morphogenesis","termid":"GO:0110111"},{"relation_name":"negatively_regulates","term_name":"nematode pharynx morphogenesis","termid":"GO:0110040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nematode pharynx morphogenesis","termid":"GO:0110042"}


id: PBO:0002136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complex subunit Ssr1","termid":"PBO:0002136"}


id: FYPO:0004058
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of reciprocal meiotic recombination at a CRE promoter in a chromosome is decreased.","definition_xrefs":["PMID:19436749","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased meiotic recombination","termid":"FYPO:0000485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased meiotic recombination at CRE promoter","synonyms":[{"name":"decreased meiotic recombination at M26 site","type":"exact"},{"name":"reduced meiotic recombination at CRE promoter","type":"exact"}],"termid":"FYPO:0004058"}


id: GO:0052676
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methylbutanol + NAD+ = 3-methylbutanal + NADH + H+. 3-methylbutanal is also known as isovaleraldehyde.","definition_xrefs":["KEGG_REACTION:R05685","RHEA:18529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"},{"relation_name":"is_a","term_name":"3-methylbutanal reductase [NAD(P)H] activity","termid":"GO:0046568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-methylbutanal reductase (NADH) activity","synonyms":[{"name":"3-methylbutanal reductase (NAD) activity","type":"exact"},{"name":"3-methylbutanol:NAD oxidoreductase activity","type":"exact"},{"name":"3-methylbutanol:NAD+ oxidoreductase activity","type":"related"},{"name":"3-methylbutyraldehyde reductase (NAD) activity","type":"exact"},{"name":"isoamyl alcohol oxidase (NAD) activity","type":"exact"}],"termid":"GO:0052676"}


id: FYPO:0000847
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein degradation is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"abnormal protein degradation during vegetative growth","termid":"FYPO:0000845"},{"relation_name":"is_a","term_name":"increased protein degradation","termid":"FYPO:0002276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"increased protein degradation during vegetative growth","synonyms":[{"name":"increased protein breakdown during vegetative growth","type":"exact"},{"name":"increased protein catabolic process during vegetative growth","type":"exact"},{"name":"increased protein catabolism during vegetative growth","type":"exact"},{"name":"increased protein degradation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000847"}


id: PBO:0055766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia NUP98 fusion partner 1","termid":"PBO:0055766"}


id: GO:0060155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a platelet dense granule. A platelet dense granule is an electron-dense granule occurring in blood platelets that stores and secretes adenosine nucleotides and serotonin. They contain a highly condensed core consisting of serotonin, histamine, calcium, magnesium, ATP, ADP, pyrophosphate and membrane lysosomal proteins.","definition_xrefs":["PMID:11487378","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule organization","termid":"GO:0033363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"platelet dense granule organization","synonyms":[{"name":"bull's eye body organization and biogenesis","type":"related"},{"name":"platelet dense body organization and biogenesis","type":"related"},{"name":"platelet dense granule organisation","type":"exact"},{"name":"platelet dense granule organization and biogenesis","type":"related"}],"termid":"GO:0060155"}


id: PBO:0040373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk subunit d pseudogene 1","termid":"PBO:0040373"}


id: PBO:0074797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13B-2","termid":"PBO:0074797"}


id: PBO:0029342
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_mitochondrial_polycistronic_RNA_precursors","termid":"PBO:0029342"}


id: PBO:0077350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 89","termid":"PBO:0077350"}


id: FYPO:0004235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype in which RNA levels vary over the course of the mitotic cell cycle normally (i.e. levels are indistinguishable from wild type at any assayed point). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PMID:21118960","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"gene expression regulation phenotype during vegetative growth","termid":"FYPO:0001333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal RNA level oscillation during mitotic cell cycle","synonyms":[{"name":"normal RNA level fluctuation during mitotic cell cycle","type":"exact"},{"name":"normal periodic expression of RNA during mitotic cell cycle","type":"exact"},{"name":"normal transcript level oscillation during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0004235"}


id: PBO:0089681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase MRP subunit Rpp21","termid":"PBO:0089681"}


id: GO:0047303
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycine + oxaloacetate = L-aspartate + glyoxylate.","definition_xrefs":["RHEA:17141","EC:2.6.1.35"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016769","GO:0003824"],"is_obsolete":false,"name":"glycine-oxaloacetate transaminase activity","secondary_identifiers":["KEGG_REACTION:R00373","MetaCyc:2.6.1.35-RXN"],"synonyms":[{"name":"glycine--oxaloacetate aminotransferase activity","type":"related"},{"name":"glycine-oxalacetate aminotransferase activity","type":"related"},{"name":"glycine-oxaloacetate aminotransferase activity","type":"exact"},{"name":"glycine:oxaloacetate aminotransferase activity","type":"related"}],"termid":"GO:0047303"}


id: GO:0097155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The collection of sensory neuron axons into a bundle of rods, known as a fascicle.","definition_xrefs":["PMID:18403711","GOC:lb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonal fasciculation","termid":"GO:0007413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fasciculation of sensory neuron axon","termid":"GO:0097155"}


id: GO:1901290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of succinyl-CoA.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinyl-CoA metabolic process","termid":"GO:0006104"},{"relation_name":"is_a","term_name":"acyl-CoA biosynthetic process","termid":"GO:0071616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006790","GO:0055086"],"is_obsolete":false,"name":"succinyl-CoA biosynthetic process","synonyms":[{"name":"succinyl-CoA anabolism","type":"exact"},{"name":"succinyl-CoA biosynthesis","type":"exact"},{"name":"succinyl-CoA formation","type":"exact"},{"name":"succinyl-CoA synthesis","type":"exact"}],"termid":"GO:1901290"}


id: PBO:0068666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 47, pseudogene","termid":"PBO:0068666"}


id: PBO:0088650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, guanine nucleotide Ggc1","termid":"PBO:0088650"}


id: FYPO:0004662
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable after exposure to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"normal viability following cellular response to UV","synonyms":[{"name":"normal cell population viability following cellular response to UV","type":"exact"},{"name":"normal viability following UV exposure","type":"exact"},{"name":"normal viability following cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0004662"}


id: GO:1904562
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphatidylinositol 5-phosphate.","definition_xrefs":["GOC:PARL","PMID:23916588","GOC:pad","GO_REF:0000068","GOC:autophagy","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol metabolic process","termid":"GO:0046488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylinositol 5-phosphate metabolic process","synonyms":[{"name":"phosphatidylinositol 5-phosphate metabolism","type":"exact"}],"termid":"GO:1904562"}


id: GO:0034229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of ethanolamine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Ethanolamine (2-aminoethanol, monoethanolamine) is an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids, such as phosphatidylethanolamine.","definition_xrefs":["GOC:rn","PMID:3514579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amine transport","termid":"GO:0015837"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"ethanolamine transport","synonyms":[{"name":"2-aminoethanol transport","type":"exact"},{"name":"monoethanolamine transport","type":"exact"}],"termid":"GO:0034229"}


id: PBO:0029326
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H2A_phosphorylation_at_mating_type_locus_during_mitotic_S_phase","termid":"PBO:0029326"}


id: PBO:0074518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA A10","termid":"PBO:0074518"}


id: PBO:0017816
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Familial Kufor-Rakeb Syndrome","termid":"PBO:0017816"}


id: MOD:01147
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(Hex)3-HexNAc-(dHex)HexNAc","termid":"MOD:01147"}


id: PBO:0030146
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_caffeine","termid":"PBO:0030146"}


id: PBO:0003852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-ATPase assembly factor Pkr1 (predicted)","termid":"PBO:0003852"}


id: GO:0106081
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91830],"is_not":false,"summary":null,"term":"GO:0106081"}]},"cv_name":"biological_process","definition":"The directed movement of maltose from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:11136464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate import across plasma membrane","termid":"GO:0098704"},{"relation_name":"is_a","term_name":"maltose transmembrane transport","termid":"GO:1904981"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"maltose import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106081","terms_by_termid":{"GO:0106081":null}}


id: PBO:0085476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable mannosylphosphate transferase; involved in the synthesis of core oligosaccharides in protein glycosylation pathway; facilitates the exit of Mnn4p from the ER via COPII-coated vesicles; member of the KRE2/MNT1 mannosyltransferase family; KTR6 has a paralog, KRE2, that arose from the whole genome duplication","termid":"PBO:0085476"}


id: PBO:0048469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glial cells missing transcription factor 2","termid":"PBO:0048469"}


id: PBO:0075991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STEAP family member 1","termid":"PBO:0075991"}


id: GO:0060965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that decreases the rate, frequency, or extent of gene silencing by a microRNA (miRNA).","definition_xrefs":["PMID:23985560","GOC:rl","GOC:bc","GOC:dph","GOC:aruk","GOC:tb","PMID:28379604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of miRNA-mediated gene silencing","termid":"GO:0060964"},{"relation_name":"is_a","term_name":"negative regulation of post-transcriptional gene silencing by regulatory ncRNA","termid":"GO:1900369"},{"relation_name":"negatively_regulates","term_name":"miRNA-mediated post-transcriptional gene silencing","termid":"GO:0035195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of miRNA-mediated gene silencing","synonyms":[{"name":"negative regulation of gene silencing by miRNA","type":"exact"},{"name":"negative regulation of gene silencing by microRNA","type":"exact"}],"termid":"GO:0060965"}


id: PBO:0070469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 4","termid":"PBO:0070469"}


id: PR:P87308
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsb5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein lsb5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.07","synonyms":[{"name":"Spom972h-lsb5","type":"exact"}],"termid":"PR:P87308"}


id: GO:0103068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: leukotriene C4 + a standard alpha amino acid = leukotriene D4 + an (gamma-L-glutamyl)-L-amino acid.","definition_xrefs":["PMID:1676842","GOC:pz","PMID:9139674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"leukotriene C4 gamma-glutamyl transferase activity","secondary_identifiers":["MetaCyc:RXN66-336","EC:2.3.2.2"],"termid":"GO:0103068"}


id: FYPO:0004471
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in the nucleolus is observed there during telophase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"protein mislocalized to nucleolus during mitotic telophase","synonyms":[{"name":"ectopic protein localization to nucleolus during mitotic telophase","type":"exact"},{"name":"protein mislocalised to nucleolus during mitotic telophase","type":"exact"},{"name":"protein mislocalised to nucleolus during telophase during vegetative growth","type":"exact"},{"name":"protein mislocalized to nucleolus during mitotic telophase during vegetative growth","type":"exact"},{"name":"protein mislocalized to nucleolus during telophase of mitosis","type":"exact"}],"termid":"FYPO:0004471"}


id: PBO:0031583
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_leucine","termid":"PBO:0031583"}


id: SO:0001181
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cis-acting element found in the 3' UTR of some mRNA which is bound by the Drosophila Bruno protein and its homologs.","definition_xrefs":["PMID:10893231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTR_region","termid":"SO:0000837"},{"relation_name":"part_of","term_name":"three_prime_UTR","termid":"SO:0000205"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bruno_response_element","synonyms":[{"name":"BRE","type":"related"},{"name":"Bruno response element","type":"exact"}],"termid":"SO:0001181"}


id: PBO:0057709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1295b","termid":"PBO:0057709"}


id: GO:0150048
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse of a granule cell fiber onto the dendrites of a Purkinje cell in cerebellum.","definition_xrefs":["GOC:bc","PMID:12427822","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric, glutamatergic, excitatory synapse","termid":"GO:0098985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cerebellar granule cell to Purkinje cell synapse","synonyms":[{"name":"cerebellar parallel fiber to Purkinje cell synapse","type":"exact"}],"termid":"GO:0150048"}


id: PBO:0064968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 22","termid":"PBO:0064968"}


id: FYPO:0000362
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the peroxisome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"output_of","term_name":"abnormal peroxisome organization","termid":"FYPO:0000811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal peroxisomal morphology","synonyms":[{"name":"abnormal peroxisomal morphology during mitotic cell cycle","type":"related"},{"name":"abnormal peroxisomal morphology during vegetative growth","type":"exact"},{"name":"peroxisomal morphology: abnormal","type":"related"}],"termid":"FYPO:0000362"}


id: PBO:0030010
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-substance_absent_from_cell","termid":"PBO:0030010"}


id: PBO:0069041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 286, pseudogene","termid":"PBO:0069041"}


id: RO:0002503
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"q towards e2 if and only if q is a relational quality such that q inheres-in some e, and e != e2 and q is dependent on e2","direct_ancestors":[{"relation_name":"is_a","term_name":"depends_on","termid":"RO:0002502"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"towards","termid":"RO:0002503"}


id: GO:0046706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of CDP, cytidine (5'-)diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate catabolic process","termid":"GO:0009195"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"CDP metabolic process","termid":"GO:0046704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"CDP catabolic process","synonyms":[{"name":"CDP breakdown","type":"exact"},{"name":"CDP catabolism","type":"exact"},{"name":"CDP degradation","type":"exact"}],"termid":"GO:0046706"}


id: PBO:0090341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2A","termid":"PBO:0090341"}


id: PBO:0059352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S16","termid":"PBO:0059352"}


id: GO:0051775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating redox state. Redox state refers to the balance of oxidized versus reduced forms of electron donors and acceptors in an organelle, cell or organ; plastoquinone, glutathione (GSH/GSSG), and nicotinamide nucleotides (NAD+/NADH and NADP+/NADPH) are among the most important.","definition_xrefs":["GOC:mah","PMID:15131240","PMID:16987039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to redox state","secondary_identifiers":["GO:0006980"],"synonyms":[{"name":"redox signal response","type":"exact"}],"termid":"GO:0051775"}


id: PBO:0055588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3024","termid":"PBO:0055588"}


id: GO:0045980
data:
  {"annotated_genes":["SJAG_00685","SJAG_02380","SJAG_05314","SJAG_01187"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74925,72107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[107433,111550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving nucleotides.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide metabolic process","termid":"GO:0006140"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"nucleotide metabolic process","termid":"GO:0009117"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_01187":null,"SJAG_02380":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"negative regulation of nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of nucleotide metabolic process","type":"exact"},{"name":"down-regulation of nucleotide metabolic process","type":"exact"},{"name":"downregulation of nucleotide metabolic process","type":"exact"},{"name":"inhibition of nucleotide metabolic process","type":"narrow"},{"name":"negative regulation of nucleotide metabolism","type":"exact"}],"termid":"GO:0045980","terms_by_termid":{"GO:0045820":null,"GO:2001211":null}}


id: GO:2000179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neural precursor cell proliferation.","definition_xrefs":["GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of neural precursor cell proliferation","termid":"GO:2000177"},{"relation_name":"positively_regulates","term_name":"neural precursor cell proliferation","termid":"GO:0061351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neural precursor cell proliferation","termid":"GO:2000179"}


id: PBO:0065860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB17 divergent transcript","termid":"PBO:0065860"}


id: PBO:0061822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 12 Y-linked","termid":"PBO:0061822"}


id: PBO:0086985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Replication fork associated factor; required for stable replication fork pausing; component of the DNA replication checkpoint pathway; required for accurate chromosome segregation during meiosis; forms nuclear foci upon DNA replication stress","termid":"PBO:0086985"}


id: GO:0042910
data:
  {"annotated_genes":["SJAG_03951","SJAG_03363","SJAG_05213","SJAG_01145"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92557,113102],"is_not":false,"summary":null,"term":"GO:0042910"},{"annotations":[114023,92133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008559"}]},"cv_name":"molecular_function","definition":"Enables the directed movement of a xenobiotic from one side of a membrane to the other. A xenobiotic is a compound foreign to the organism exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GOC:krc","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01145":null,"SJAG_03363":null,"SJAG_03951":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"xenobiotic transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0015559","GO:0015564","GO:0090484","GO:0015239","Reactome:R-HSA-5625574","Reactome:R-HSA-597628","GO:0015238"],"synonyms":[{"name":"drug transmembrane transporter activity","type":"related"},{"name":"drug transporter activity","type":"related"},{"name":"multidrug efflux pump activity","type":"related"},{"name":"multidrug transporter activity","type":"related"},{"name":"multidrug, alkane resistant pump activity","type":"related"},{"name":"xenobiotic transporter activity","type":"related"}],"termid":"GO:0042910","terms_by_termid":{"GO:0008559":null,"GO:0042910":null}}


id: GO:0042593
data:
  {"annotated_genes":["SJAG_04026","SJAG_03081","SJAG_02444","SJAG_04312","SJAG_00574","SJAG_01254","SJAG_00472","SJAG_01754","SJAG_04495","SJAG_04334","SJAG_01699"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97906,105066,90287,102539,105569,101948,111601,102893,112641],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"},{"annotations":[94060,90586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001678"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of glucose within an organism or cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate homeostasis","termid":"GO:0033500"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00472":null,"SJAG_00574":null,"SJAG_01254":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null,"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glucose homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042593","terms_by_termid":{"GO:0001678":null,"GO:0010619":null}}


id: PBO:0087036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L17B; required for processing of 27SB pre-rRNA and formation of stable 66S assembly intermediates; homologous to mammalian ribosomal protein L17 and bacterial L22; RPL17B has a paralog, RPL17A, that arose from the whole genome duplication","termid":"PBO:0087036"}


id: PBO:0058940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanocyte inducing transcription factor","termid":"PBO:0058940"}


id: PBO:0083721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-resident protein involved in peroxisomal biogenesis; ER-localized protein that associates with peroxisomes; interacts with Pex30p and reticulons Rtn1p and Yop1p to regulate peroxisome biogenesis from the ER; role in peroxisomal-destined vesicular flow from the ER; regulates peroxisomal size, number and distribution; Pex28p and Pex29p may act at steps upstream of those mediated by Pex30p, Pex31p, and Pex32p; forms ER foci upon DNA replication stress","termid":"PBO:0083721"}


id: FYPO:0007658
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell forms a mating projection with a flatter (less rounded) tip than normal.","definition_xrefs":["PomBase:mah","PMID:9606213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal shmoo morphology","termid":"FYPO:0000357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000301"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000301"],"is_obsolete":false,"name":"shmoo with flat tip","synonyms":[{"name":"conjugation tube with flat tip","type":"exact"},{"name":"mating projection with flat tip","type":"exact"},{"name":"shmoo with flattened tip","type":"exact"}],"termid":"FYPO:0007658"}


id: PBO:0061690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 205","termid":"PBO:0061690"}


id: PR:O60070
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A set1/Ash2 histone methyltransferase complex subunit ASH2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03834","PANTHER:PTHR10598:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"set1 complex component ash2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.08c","secondary_identifiers":["UniProtKB:O60070"],"synonyms":[{"name":"COMPASS component ash2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Lid2C component ash2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Set1C component ash2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ASH2L","type":"exact"},{"name":"complex proteins associated with set1 protein ash2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lid2 complex component ash2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60070"}


id: GO:1904593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to prostaglandin.","definition_xrefs":["PMID:21445266","GO_REF:0000067","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid derivative binding","termid":"GO:1901567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"prostaglandin binding","termid":"GO:1904593"}


id: PBO:0004614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 implicated in trancription (predicted)","termid":"PBO:0004614"}


id: PBO:0064688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 24","termid":"PBO:0064688"}


id: FYPO:0001455
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the cellular response to water deprivation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular response to stress during vegetative growth","termid":"FYPO:0000968"},{"relation_name":"is_a","term_name":"normal cellular response to chemical stimulus during vegetative growth","termid":"FYPO:0001318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular response to water deprivation","synonyms":[{"name":"normal cellular response to dehydration","type":"exact"},{"name":"normal cellular response to water deprivation during mitotic cell cycle","type":"related"},{"name":"normal cellular response to water deprivation during vegetative growth","type":"exact"}],"termid":"FYPO:0001455"}


id: PBO:0054978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2392","termid":"PBO:0054978"}


id: PBO:0063953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-5-phosphate 4-kinase type 2 beta","termid":"PBO:0063953"}


id: PR:O94561
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bcp1 gene.","definition_xrefs":["UniProtKB:O94561","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin C1773.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.02c","synonyms":[{"name":"Spom972h-bcp1","type":"exact"},{"name":"nTPx (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nuclear thiol peroxidase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"thioredoxin reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94561"}


id: PR:O94629
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sro1 gene.","definition_xrefs":["UniProtKB:O94629","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress-responsive protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.11","synonyms":[{"name":"Spom972h-sro1","type":"exact"}],"termid":"PR:O94629"}


id: FYPO:0003405
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glyoxalase III activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal glyoxalase III activity","termid":"FYPO:0003403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0005447","FYPO:0000654","FYPO:0000002","FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"decreased glyoxalase III activity","synonyms":[{"name":"reduced glyoxalase III activity","type":"exact"}],"termid":"FYPO:0003405"}


id: PBO:0067605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 771, pseudogene","termid":"PBO:0067605"}


id: GO:0033745
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-methionine + thioredoxin disulfide + H2O = L-methionine (R)-S-oxide + thioredoxin.","definition_xrefs":["EC:1.8.4.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-methionine-(R)-S-oxide reductase activity","secondary_identifiers":["MetaCyc:1.8.4.14-RXN","RHEA:21260"],"synonyms":[{"name":"FRMsr","type":"related"},{"name":"L-methionine:thioredoxin-disulfide S-oxidoreductase [L-methionine (R)-S-oxide-forming] activity","type":"related"},{"name":"free met-R-(o) reductase activity","type":"related"},{"name":"free-methionine (R)-S-oxide reductase activity","type":"related"},{"name":"methionine-R-sulfoxide reductase activity","type":"related"}],"termid":"GO:0033745"}


id: PBO:0091269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary transcript for snoZ3,Z4,Z5,Z7,Z8","termid":"PBO:0091269"}


id: GO:0101002
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Highly exocytosable gelatinase-poor granules found in neutrophils and rich in ficolin-1. Ficolin-1 is released from neutrophil granules by stimulation with fMLP or PMA, and the majority becomes associated with the surface membrane of the cells and can be detected by flow cytometry.","definition_xrefs":["GOC:mec","PMID:19741154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"ficolin-1-rich granule","synonyms":[{"name":"ficolin granule","type":"related"},{"name":"ficolin-1 rich granule","type":"exact"}],"termid":"GO:0101002"}


id: MOD:00132
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-serine residue and an L-lysine residue to release water and form 2-amino-6-(2-amino-2-carboxyethylamino)hexanoic acid.","definition_xrefs":["RESID:AA0123#KSX","DeltaMass:0","PubMed:2544544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"L-lysinoalanine","termid":"MOD:01853"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysinoalanine (Lys-Ser)","synonyms":[{"name":"(2R,9S)-lysinoalanine","type":"exact"},{"name":"(2S)-2-amino-6-([(2R)-2-amino-2-carboxyethyl]amino)hexanoic acid","type":"exact"},{"name":"CROSSLNK Lysinoalanine (Ser-Lys)","type":"exact"},{"name":"L-lysinoalanine","type":"exact"},{"name":"LAL","type":"exact"},{"name":"Lysinoalanine (from Cysteine)","type":"exact"},{"name":"N-epsilon-(2-amino-2-carboxyethyl)-L-lysine","type":"exact"},{"name":"N6-(2-amino-2-carboxyethyl)-L-lysine","type":"exact"},{"name":"XLNK-N6Lys-3Dha(Ser)","type":"exact"},{"name":"alaninolysine","type":"exact"}],"termid":"MOD:00132"}


id: FYPO:0003520
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of hercynylselenocysteine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"increased cellular hercynylselenocysteine level","termid":"FYPO:0003523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular hercynylselenocysteine level during vegetative growth","synonyms":[{"name":"increased cellular hercynylselenocysteine level during mitotic cell cycle","type":"related"},{"name":"increased hercynylselenocysteine level during vegetative growth","type":"exact"}],"termid":"FYPO:0003520"}


id: PBO:0082226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha arrestin, substrate of calcineurin; controls nutrient-mediated intracellular sorting of permease Gap1p; interacts with AP-1 subunit Apl4p; dephosphorylation of Aly1p required for the endocytosis of Dip5p; may regulate endocytosis of plasma membrane proteins by recruiting ubiquitin ligase Rsp5p to plasma membrane targets; ALY1 has a paralog, ALY2, that arose from the whole genome duplication","termid":"PBO:0082226"}


id: GO:0062123
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98455],"is_not":false,"summary":null,"term":"GO:0062123"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of linear element maturation.","definition_xrefs":["PMID:30640914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"is_a","term_name":"regulation of linear element assembly","termid":"GO:0090006"},{"relation_name":"regulates","term_name":"linear element maturation","termid":"GO:0062121"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of linear element maturation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062123","terms_by_termid":{"GO:0062123":null}}


id: PBO:0029237
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring_disassembly","termid":"PBO:0029237"}


id: PBO:0002129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein farnesyltransferase beta subunit Cpp1","termid":"PBO:0002129"}


id: PBO:0114217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Mlo3","termid":"PBO:0114217"}


id: GO:0047774
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + NADP+ = cis-2,3-dehydroacyl-CoA + NADPH.","definition_xrefs":["EC:1.3.1.37","MetaCyc:CIS-2-ENOYL-COA-REDUCTASE-NADPH-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cis-2-enoyl-CoA reductase (NADPH) activity","synonyms":[{"name":"NADPH-dependent cis-enoyl-CoA reductase activity","type":"related"},{"name":"acyl-CoA:NADP+ cis-2-oxidoreductase activity","type":"related"},{"name":"cis-2-enoyl-coenzyme A reductase activity","type":"related"},{"name":"reductase, cis-2-enoyl coenzyme A","type":"related"}],"termid":"GO:0047774"}


id: PBO:0050494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B4","termid":"PBO:0050494"}


id: GO:0047122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A + H2O + quinaldate = AH(2) + kynurenate.","definition_xrefs":["RHEA:16697","EC:1.3.99.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"quinaldate 4-oxidoreductase activity","secondary_identifiers":["KEGG_REACTION:R03687","MetaCyc:1.3.99.18-RXN"],"synonyms":[{"name":"quinaldic acid 4-oxidoreductase activity","type":"related"},{"name":"quinoline-2-carboxylate:acceptor 4-oxidoreductase (hydroxylating)","type":"related"}],"termid":"GO:0047122"}


id: GO:0002672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of B cell anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of B cell tolerance induction","termid":"GO:0002663"},{"relation_name":"is_a","term_name":"regulation of B cell anergy","termid":"GO:0002670"},{"relation_name":"is_a","term_name":"positive regulation of lymphocyte anergy","termid":"GO:0002913"},{"relation_name":"positively_regulates","term_name":"B cell anergy","termid":"GO:0002515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of B cell anergy","synonyms":[{"name":"activation of B cell anergy","type":"narrow"},{"name":"positive regulation of B lymphocyte anergy","type":"exact"},{"name":"positive regulation of B-cell anergy","type":"exact"},{"name":"positive regulation of B-lymphocyte anergy","type":"exact"},{"name":"stimulation of B cell anergy","type":"narrow"},{"name":"up regulation of B cell anergy","type":"exact"},{"name":"up-regulation of B cell anergy","type":"exact"},{"name":"upregulation of B cell anergy","type":"exact"}],"termid":"GO:0002672"}


id: GO:0019187
data:
  {"annotated_genes":["SJAG_02102"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004578"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a mannose residue to an oligosaccharide, forming a beta-(1->4) linkage.","definition_xrefs":["GOC:mcc","PMID:8166646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02102":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"beta-1,4-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019187","terms_by_termid":{"GO:0004578":null}}


id: PR:O14064
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bir1 gene.","definition_xrefs":["UniProtKB:O14064","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein bir1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC962.02c","synonyms":[{"name":"Spom972h-bir1","type":"exact"},{"name":"chromosome segregation protein cut17 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14064"}


id: GO:0048257
data:
  {"annotated_genes":["SJAG_01044"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113185],"is_not":false,"summary":null,"term":"GO:0048257"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of a 3' flap structure in DNA, but not other DNA structures; processes the 3' ends of Okazaki fragments in lagging strand DNA synthesis.","definition_xrefs":["GOC:jid","PMID:10635319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity, producing 3'-phosphomonoesters","termid":"GO:0016889"},{"relation_name":"is_a","term_name":"flap endonuclease activity","termid":"GO:0048256"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01044":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"3'-flap endonuclease activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"3' flap endonuclease activity","type":"exact"}],"termid":"GO:0048257","terms_by_termid":{"GO:0048257":null}}


id: PR:G2TRL4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- prl65 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRL4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein prl65 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.16","synonyms":[{"name":"Spom972h-prl65","type":"exact"}],"termid":"PR:G2TRL4"}


id: GO:0039549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the rate or extent of the phosphorylation of IRF3 (interferon regulatory factor-3), thereby inhibiting IRF3 activation. In response to signaling from RIG-1/MDA-5 receptors, IRF3 is phosphorylated on multiple serine and threonine residues; phosphorylation results in the cytoplasm-to-nucleus translocation of IRF3, DNA binding, and increased transcriptional activation of interferon-encoding genes.","definition_xrefs":["PMID:20631144","PMID:9566918","PMID:11124948","PMID:12829834"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host IRF3 activity by inhibition of IRF3 phosphorylation (obsolete GO:0039549)","synonyms":[{"name":"inhibition of phosphorylation-induced activation of host IRF3","type":"related"},{"name":"inhibition of virus-induced IRF-3 phosphorylation","type":"broad"}],"termid":"GO:0039549"}


id: SO:0001180
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cis-acting element found in the 3' UTR of some mRNA which is rich in AUUUA pentamers. Messenger RNAs bearing multiple AU-rich elements are often unstable.","definition_xrefs":["PMID:7892223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTR_region","termid":"SO:0000837"},{"relation_name":"part_of","term_name":"three_prime_UTR","termid":"SO:0000205"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AU_rich_element","secondary_identifiers":["http://en.wikipedia.org/wiki/AU-rich_element"],"synonyms":[{"name":"ARE","type":"related"},{"name":"AU rich element","type":"exact"},{"name":"AU-rich element","type":"exact"}],"termid":"SO:0001180"}


id: GO:0140621
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A short filamentous structure on the surface of a bacterial cell distinguished from other pili by their D-mannose-sensitive agglutinatination of erythrocytes. In E. coli, type I pili consist of a short tip fibrillum made up of the adhesin protein (FimH) and two minor subunits (FimG and FimF) that is joined to the pilus rod, a homopolymer of ~1000 FimA subunits.","definition_xrefs":["PMID:28496159","PMID:29345620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilus","termid":"GO:0009289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"type I pilus","synonyms":[{"name":"type 1 pilus","type":"exact"},{"name":"type I fimbriae","type":"exact"},{"name":"type I pili","type":"exact"}],"termid":"GO:0140621"}


id: PBO:0080094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uronyl 2-sulfotransferase","termid":"PBO:0080094"}


id: GO:0031332
data:
  {"annotated_genes":["SJAG_03916","SJAG_02621","SJAG_04061","SJAG_03706","SJAG_03042","SJAG_02594"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[113985],"is_not":false,"summary":null,"term":"GO:0031332"},{"annotations":[84894,84839,114146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033167"},{"annotations":[108268,114152,87319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030958"}]},"cv_name":"cellular_component","definition":"Any protein complex that mediates the effects of small interfering RNAs on gene expression. Most known examples contain one or more members of the Argonaute family of proteins.","definition_xrefs":["GOC:mah","PMID:14704433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02594":null,"SJAG_02621":null,"SJAG_03042":null,"SJAG_03706":null,"SJAG_03916":null,"SJAG_04061":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"RNAi effector complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031332","terms_by_termid":{"GO:0030958":null,"GO:0031332":null,"GO:0033167":null}}


id: PBO:0076171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family, cytosolic, 1C, member 2 pseudogene 2","termid":"PBO:0076171"}


id: GO:0018910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving benzene, C6H6, a volatile, very inflammable liquid, contained in the naphtha produced by the destructive distillation of coal, from which it is separated by fractional distillation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"benzene metabolic process","synonyms":[{"name":"benzene metabolism","type":"exact"}],"termid":"GO:0018910"}


id: PBO:0056281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase alpha class 2C member 1","termid":"PBO:0056281"}


id: PBO:0077976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon CGC) 4-1","termid":"PBO:0077976"}


id: GO:0002787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antibacterial peptide production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antimicrobial peptide production","termid":"GO:0002785"},{"relation_name":"is_a","term_name":"regulation of antibacterial peptide production","termid":"GO:0002786"},{"relation_name":"is_a","term_name":"negative regulation of defense response to bacterium","termid":"GO:1900425"},{"relation_name":"negatively_regulates","term_name":"antibacterial peptide production","termid":"GO:0002778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of antibacterial peptide production","synonyms":[{"name":"down regulation of antibacterial peptide production","type":"exact"},{"name":"down-regulation of antibacterial peptide production","type":"exact"},{"name":"downregulation of antibacterial peptide production","type":"exact"},{"name":"inhibition of antibacterial peptide production","type":"narrow"}],"termid":"GO:0002787"}


id: FYPO:0005322
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which anaphase-promoting complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal anaphase-promoting complex assembly","synonyms":[{"name":"normal APC assembly","type":"exact"},{"name":"normal anaphase-promoting complex assembly during mitotic cell cycle","type":"related"},{"name":"normal anaphase-promoting complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0005322"}


id: PBO:0028939
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_growth","termid":"PBO:0028939"}


id: PBO:0086807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YER039C-A is not an essential gene","termid":"PBO:0086807"}


id: GO:0048285
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