# terms

id: GO:0031359
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the chloroplast outer membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of chloroplast outer membrane (obsolete GO:0031359)","synonyms":[{"name":"integral to chloroplast outer membrane","type":"narrow"}],"termid":"GO:0031359"}


id: PBO:0063966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PU.1 (SPI1) induced regulator of S100A8 and S100A9 alarmin transcription 1","termid":"PBO:0063966"}


id: GO:0006998
data:
  {"annotated_genes":["SJAG_00840","SJAG_05207","SJAG_01745","SJAG_04509","SJAG_04972","SJAG_03592","SJAG_03891","SJAG_01422","SJAG_03449","SJAG_01242","SJAG_03783","SJAG_00416","SJAG_01050","SJAG_01906","SJAG_03073","SJAG_00810","SJAG_01356","SJAG_04464","SJAG_00680","SJAG_00900","SJAG_04271","SJAG_04883","SJAG_02763","SJAG_01467","SJAG_03313","SJAG_03892","SJAG_03219","SJAG_03940","SJAG_04319","SJAG_01460","SJAG_03491","SJAG_04578","SJAG_04489"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87779,96660,99799,106377,106518,108808,115428],"is_not":false,"summary":null,"term":"GO:0006998"},{"annotations":[97493,89894],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140515"},{"annotations":[105965,89103,94422,106376,93746,83962],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0101026"},{"annotations":[106517],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007077"},{"annotations":[115374,107069,115191,115423],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0101024"},{"annotations":[84025,96949,99208,99798,115489,115490,115491,115492,94021,102605,87394,92026],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007084"},{"annotations":[99731],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140516"},{"annotations":[87395,114234],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071765"},{"annotations":[84593],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0048288"},{"annotations":[87510,105783,115558,87396,103777,85139,99525,87990],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071763"},{"annotations":[92702],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031468"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the nuclear envelope.","definition_xrefs":["GOC:jl","GOC:mah","GOC:ems","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"nucleus organization","termid":"GO:0006997"},{"relation_name":"part_of","term_name":"endomembrane system organization","termid":"GO:0010256"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00416":null,"SJAG_00680":null,"SJAG_00810":null,"SJAG_00840":null,"SJAG_00900":null,"SJAG_01050":null,"SJAG_01242":null,"SJAG_01356":null,"SJAG_01422":null,"SJAG_01460":null,"SJAG_01467":null,"SJAG_01745":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03073":null,"SJAG_03219":null,"SJAG_03313":null,"SJAG_03449":null,"SJAG_03491":null,"SJAG_03592":null,"SJAG_03783":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_03940":null,"SJAG_04271":null,"SJAG_04319":null,"SJAG_04464":null,"SJAG_04489":null,"SJAG_04509":null,"SJAG_04578":null,"SJAG_04883":null,"SJAG_04972":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"nuclear envelope organization","references_by_uniquename":{"GO_REF:0000107":null,"PMID:21802294":null,"PMID:24184107":null,"PMID:26774782":null,"PMID:28954740":null,"PMID:32243490":null},"synonyms":[{"name":"nuclear envelope organisation","type":"exact"},{"name":"nuclear envelope organization and biogenesis","type":"related"}],"termid":"GO:0006998","terms_by_termid":{"GO:0006998":null,"GO:0007077":null,"GO:0007084":null,"GO:0031468":null,"GO:0048288":null,"GO:0071763":null,"GO:0071765":null,"GO:0101024":null,"GO:0101026":null,"GO:0140515":null,"GO:0140516":null}}


id: PBO:0058106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4321","termid":"PBO:0058106"}


id: GO:0006293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stabilization of the multiprotein complex involved in damage recognition, DNA helix unwinding, and endonucleolytic cleavage at the site of DNA damage as well as the unwound DNA. The stabilization of the protein-DNA complex ensures proper positioning of the preincision complex before the phosphodiester backbone of the damaged strand is cleaved 3' and 5' of the site of DNA damage.","definition_xrefs":["PMID:10197977","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"part_of","term_name":"nucleotide-excision repair","termid":"GO:0006289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"nucleotide-excision repair, preincision complex stabilization","termid":"GO:0006293"}


id: GO:0004857
data:
  {"annotated_genes":["SJAG_02485","SJAG_04398","SJAG_01072","SJAG_04633","SJAG_01821","SJAG_04699","SJAG_00460","SJAG_02380","SJAG_01245","SJAG_03272","SJAG_01118","SJAG_02786","SJAG_04627","SJAG_02154","SJAG_03629","SJAG_03309","SJAG_02594","SJAG_00452","SJAG_01150","SJAG_04203","SJAG_01348","SJAG_02191","SJAG_04999","SJAG_01515","SJAG_04546","SJAG_03931","SJAG_01210","SJAG_02874","SJAG_02194","SJAG_04505"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105290,113068],"is_not":false,"summary":null,"term":"GO:0004857"},{"annotations":[96504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004862"},{"annotations":[104947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004861"},{"annotations":[112911,99343,85475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004866"},{"annotations":[84899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060698"},{"annotations":[112385],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005095"},{"annotations":[88246,93298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990624"},{"annotations":[91170,91171,98161,98162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019210"},{"annotations":[107235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008073"},{"annotations":[96029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030414"},{"annotations":[111393,103067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004860"},{"annotations":[86341,85446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004864"},{"annotations":[104462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030291"},{"annotations":[83924,95494,107439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004865"},{"annotations":[84900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008428"},{"annotations":[91552,93149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990846"},{"annotations":[89233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004867"},{"annotations":[91152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010521"},{"annotations":[111629,94756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990948"},{"annotations":[110696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055105"}]},"cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of an enzyme.","definition_xrefs":["GOC:ai","GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"},{"relation_name":"is_a","term_name":"molecular function inhibitor activity","termid":"GO:0140678"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00452":null,"SJAG_00460":null,"SJAG_01072":null,"SJAG_01118":null,"SJAG_01150":null,"SJAG_01210":null,"SJAG_01245":null,"SJAG_01348":null,"SJAG_01515":null,"SJAG_01821":null,"SJAG_02154":null,"SJAG_02191":null,"SJAG_02194":null,"SJAG_02380":null,"SJAG_02485":null,"SJAG_02594":null,"SJAG_02786":null,"SJAG_02874":null,"SJAG_03272":null,"SJAG_03309":null,"SJAG_03629":null,"SJAG_03931":null,"SJAG_04203":null,"SJAG_04398":null,"SJAG_04505":null,"SJAG_04546":null,"SJAG_04627":null,"SJAG_04633":null,"SJAG_04699":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0140678","GO:0030234"],"is_obsolete":false,"name":"enzyme inhibitor activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0048551"],"synonyms":[{"name":"metalloenzyme inhibitor activity","type":"narrow"}],"termid":"GO:0004857","terms_by_termid":{"GO:0004857":null,"GO:0004860":null,"GO:0004861":null,"GO:0004862":null,"GO:0004864":null,"GO:0004865":null,"GO:0004866":null,"GO:0004867":null,"GO:0005095":null,"GO:0008073":null,"GO:0008428":null,"GO:0010521":null,"GO:0019210":null,"GO:0030291":null,"GO:0030414":null,"GO:0055105":null,"GO:0060698":null,"GO:1990624":null,"GO:1990846":null,"GO:1990948":null}}


id: GO:0018462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-(hydroxymethyl)benzenesulfonate + NAD+ = 4-formylbenzenesulfonate + H+ + NADH.","definition_xrefs":["EC:1.1.1.257","RHEA:24412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"4-(hydroxymethyl)benzenesulfonate dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0291","KEGG_REACTION:R05271","MetaCyc:SOLDEHYD-RXN"],"synonyms":[{"name":"4-(hydroxymethyl)benzenesulfonate:NAD+ oxidoreductase activity","type":"related"},{"name":"4-(hydroxymethyl)benzenesulphonate dehydrogenase activity","type":"exact"},{"name":"4-sulfobenzyl alcohol dehydrogenase activity","type":"exact"}],"termid":"GO:0018462"}


id: GO:0007071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase III promoter that occurs during the mitotic cell cycle.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase III promoter during mitotic cell cycle (obsolete GO:0007071)","synonyms":[{"name":"down regulation of transcription from RNA polymerase III promoter during mitosis","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase III promoter during mitosis","type":"exact"},{"name":"downregulation of transcription from RNA polymerase III promoter during mitosis","type":"exact"},{"name":"inhibition of transcription from RNA polymerase III promoter during mitosis","type":"narrow"},{"name":"mitotic repression of transcription from Pol III promoter","type":"exact"},{"name":"negative regulation of transcription from Pol III promoter during mitosis","type":"exact"},{"name":"negative regulation of transcription from RNA polymerase III promoter, mitotic","type":"exact"}],"termid":"GO:0007071"}


id: PBO:0066957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 259","termid":"PBO:0066957"}


id: GO:0004512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucose 6-phosphate = 1D-myo-inositol 3-phosphate. This reaction requires NAD, which dehydrogenates the CHOH group to CO at C-5 of the glucose 6-phosphate, making C-6 into an active methylene, able to condense with the aldehyde at C-1. Finally, the enzyme-bound NADH reconverts C-5 into the CHOH form.","definition_xrefs":["RHEA:10716","EC:5.5.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"inositol-3-phosphate synthase activity","secondary_identifiers":["Reactome:R-HSA-1855178","KEGG_REACTION:R07324","MetaCyc:MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN"],"synonyms":[{"name":"1L-myo-inositol-1-phosphate lyase (isomerizing)","type":"related"},{"name":"D-glucose 6-phosphate cycloaldolase activity","type":"related"},{"name":"glucocycloaldolase activity","type":"related"},{"name":"glucose 6-phosphate cyclase activity","type":"related"},{"name":"glucose-6-phosphate inositol monophosphate cycloaldolase activity","type":"related"},{"name":"inositol 1-phosphate synthatase activity","type":"related"},{"name":"inositol 1-phosphate synthetase activity","type":"related"}],"termid":"GO:0004512"}


id: PBO:0080029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 15","termid":"PBO:0080029"}


id: GO:1990724
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A homodimeric protein complex that is capable of binding a range of carbohydrates and is involved in anti-inflammatory and pro-apoptotic processes.","definition_xrefs":["GOC:bhm","PMID:18777589","PMID:15476813","PMID:8262940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex involved in cell-cell adhesion","termid":"GO:0098635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"galectin complex","synonyms":[{"name":"galectin-1 complex","type":"narrow"},{"name":"galectin-2 complex","type":"narrow"}],"termid":"GO:1990724"}


id: PBO:0084514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of conserved ER transmembrane complex; required for efficient folding of proteins in the ER; null mutant displays induction of the unfolded protein response, and also shows K1 killer toxin resistance; homologous to worm B0334.15/EMC-5, fly CG15168, human MMGT","termid":"PBO:0084514"}


id: GO:0045013
data:
  {"annotated_genes":["SJAG_03911","SJAG_03473"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70977,102297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000433"}]},"cv_name":"biological_process","definition":"A transcription regulation process in which the presence of one carbon source leads to a decrease in the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other carbon sources. Carbon catabolite repression is a mechanism of genetic regulation which the accumulation of catabolites of one substance in the cell represses the formation of enzymes that contribute to the catabolism of other substances.","definition_xrefs":["PMID:11018147","ISBN:0198506732","PMID:18359269","PMID:9618445","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"},{"relation_name":"is_a","term_name":"carbon catabolite regulation of transcription","termid":"GO:0045990"},{"relation_name":"is_a","term_name":"carbon catabolite repression","termid":"GO:0061985"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03473":null,"SJAG_03911":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"negatively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351","GO:0006355"],"is_obsolete":false,"name":"carbon catabolite repression of transcription","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"carbon catabolite repression","type":"related"},{"name":"negative regulation of transcription by carbon catabolites","type":"exact"}],"termid":"GO:0045013","terms_by_termid":{"GO:0000433":null}}


id: GO:0033906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the random hydrolysis of 1,3-linkages between beta-D-glucuronate and N-acetyl-D-glucosamine residues in hyaluronate.","definition_xrefs":["EC:3.2.1.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"hyaluronoglucuronidase activity","secondary_identifiers":["MetaCyc:3.2.1.36-RXN"],"synonyms":[{"name":"glucuronoglucosaminoglycan hyaluronate lyase activity","type":"related"},{"name":"hyaluronate 3-glycanohydrolase activity","type":"related"},{"name":"hyaluronidase activity","type":"broad"},{"name":"orgelase activity","type":"related"}],"termid":"GO:0033906"}


id: GO:0032163
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A septin band, i.e. a diffuse ring composed of a series of septin bars running parallel to the long axis of the cell, located at the junction between the mother cell and the germ tube (hypha) of a fungal cell growing filamentously.","definition_xrefs":["GOC:krc","PMID:16151244","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin band","termid":"GO:0032158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hyphal septin band","termid":"GO:0032163"}


id: PBO:0070613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 81","termid":"PBO:0070613"}


id: PBO:0039665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 3 subunit delta 1","termid":"PBO:0039665"}


id: GO:0032559
data:
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id: GO:0070420
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id: GO:1900218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic process involved in metanephric nephron tubule development.","definition_xrefs":["GOC:mtg_kidney_jan10","PMID:17314325","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in metanephric nephron tubule development","termid":"GO:1900217"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic process involved in development","termid":"GO:1904746"},{"relation_name":"negatively_regulates","term_name":"apoptotic process involved in metanephric nephron tubule development","termid":"GO:1900205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of apoptotic process involved in metanephric nephron tubule development","synonyms":[{"name":"down regulation of apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"down regulation of apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"down regulation of apoptotic process involved in metanephric nephron tubule development","type":"exact"},{"name":"down regulation of apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"down regulation of apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"down regulation of apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"down regulation of programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"down regulation of signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"down regulation of type I programmed cell death of metanephric nephron tubule development","type":"narrow"},{"name":"down-regulation of apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"down-regulation of apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"down-regulation of apoptotic process involved in metanephric nephron tubule development","type":"exact"},{"name":"down-regulation of apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"down-regulation of apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"down-regulation of apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"down-regulation of programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"down-regulation of signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"down-regulation of type I programmed cell death of metanephric nephron tubule development","type":"narrow"},{"name":"downregulation of apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"downregulation of apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"downregulation of apoptotic process involved in metanephric nephron tubule development","type":"exact"},{"name":"downregulation of apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"downregulation of apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"downregulation of apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"downregulation of programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"downregulation of signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"downregulation of type I programmed cell death of metanephric nephron tubule development","type":"narrow"},{"name":"inhibition of apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"inhibition of apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"inhibition of apoptotic process involved in metanephric nephron tubule development","type":"narrow"},{"name":"inhibition of apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"inhibition of apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"inhibition of apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"inhibition of programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"inhibition of signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"inhibition of type I programmed cell death of metanephric nephron tubule development","type":"narrow"},{"name":"negative regulation of apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"negative regulation of apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"negative regulation of apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"negative regulation of apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"negative regulation of apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"negative regulation of programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"negative regulation of signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"negative regulation of type I programmed cell death of metanephric nephron tubule development","type":"narrow"}],"termid":"GO:1900218"}


id: GO:0038175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the SREBP signaling pathway in response to an increase in oxygen levels.","definition_xrefs":["GOC:al","PMID:22017871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of SREBP signaling pathway","termid":"GO:2000639"},{"relation_name":"part_of","term_name":"cellular response to increased oxygen levels","termid":"GO:0036295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of SREBP signaling pathway in response to increased oxygen levels","synonyms":[{"name":"negative regulation of SREBP-mediated signaling pathway in presence of oxygen","type":"related"},{"name":"negative regulation of SREBP-mediated signaling pathway in response to increased oxygen levels","type":"exact"}],"termid":"GO:0038175"}


id: PBO:0048664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol kinase 6 pseudogene","termid":"PBO:0048664"}


id: PBO:0082706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the MICOS complex; MICOS (formerly MINOS or MitOS) is a mitochondrial inner membrane complex that extends into the intermembrane space and has a role in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane; forms a subcomplex with Mic10p and Mic27p whose assembly and stability requires cardiolipin","termid":"PBO:0082706"}


id: PBO:0044374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYLD antisense RNA 1","termid":"PBO:0044374"}


id: GO:0045181
data:
  {"annotated_genes":["SJAG_04054"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016040"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 L-glutamate + NAD(P)+ = L-glutamine + 2-oxoglutarate + NAD(P)H + H+.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate synthase activity","termid":"GO:0015930"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04054":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glutamate synthase activity, NAD(P)H as acceptor","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glutamate synthase activity, NADH or NADPH as acceptor","type":"related"}],"termid":"GO:0045181","terms_by_termid":{"GO:0016040":null}}


id: FYPO:0003034
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to ultraviolet light is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased RNA level during cellular response to UV","synonyms":[{"name":"decreased RNA accumulation during cellular response to ultraviolet light","type":"related"},{"name":"decreased RNA level during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to UV during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to ultraviolet light","type":"exact"},{"name":"decreased transcript level during cellular response to UV","type":"exact"},{"name":"reduced RNA level during cellular response to UV","type":"exact"}],"termid":"FYPO:0003034"}


id: PBO:0057422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548x","termid":"PBO:0057422"}


id: PBO:0047507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FER1L6 antisense RNA 2","termid":"PBO:0047507"}


id: PR:P78817
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gmh5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized alpha-1,2-galactosyltransferase C637.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC637.06","synonyms":[{"name":"Spom972h-gmh5","type":"exact"}],"termid":"PR:P78817"}


id: PBO:0005602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA ligase (predicted)","termid":"PBO:0005602"}


id: GO:1903074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a TRAIL death-inducing signaling complex.","definition_xrefs":["GOC:TermGenie","GOC:bf","GOC:PARL","PMID:21785459","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"death-inducing signaling complex assembly","termid":"GO:0071550"},{"relation_name":"part_of","term_name":"TRAIL-activated apoptotic signaling pathway","termid":"GO:0036462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"TRAIL death-inducing signaling complex assembly","synonyms":[{"name":"TRAIL DISC assembly","type":"exact"},{"name":"TRAIL DISC formation","type":"exact"},{"name":"TRAIL death-inducing signaling complex formation","type":"exact"},{"name":"TRAIL death-inducing signalling complex assembly","type":"exact"},{"name":"TRAIL death-inducing signalling complex formation","type":"exact"}],"termid":"GO:1903074"}


id: GO:1902285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any semaphorin-plexin signaling pathway that is involved in neuron projection guidance.","definition_xrefs":["GOC:BHF","GOC:rl","GOC:TermGenie","PMID:22790009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"semaphorin-plexin signaling pathway","termid":"GO:0071526"},{"relation_name":"part_of","term_name":"neuron projection guidance","termid":"GO:0097485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"semaphorin-plexin signaling pathway involved in neuron projection guidance","synonyms":[{"name":"semaphorin-plexin signaling pathway involved in neurite guidance","type":"narrow"},{"name":"semaphorin-plexin signaling pathway involved in neuron process guidance","type":"exact"},{"name":"semaphorin-plexin signaling pathway involved in neuron protrusion guidance","type":"exact"},{"name":"semaphorin-plexin signaling pathway involved in neuronal cell projection guidance","type":"exact"},{"name":"semaphorin-plexin signalling pathway involved in neurite guidance","type":"narrow"},{"name":"semaphorin-plexin signalling pathway involved in neuron process guidance","type":"exact"},{"name":"semaphorin-plexin signalling pathway involved in neuron projection guidance","type":"exact"},{"name":"semaphorin-plexin signalling pathway involved in neuron protrusion guidance","type":"exact"},{"name":"semaphorin-plexin signalling pathway involved in neuronal cell projection guidance","type":"exact"}],"termid":"GO:1902285"}


id: GO:0140108
data:
  {"annotated_genes":["SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110245],"is_not":false,"summary":null,"term":"GO:0140108"}]},"cv_name":"molecular_function","definition":"Enables the transfer of glucose from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["PMID:25411338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose transmembrane transporter activity","termid":"GO:0005355"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"high-affinity glucose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140108","terms_by_termid":{"GO:0140108":null}}


id: MOD:01171
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-acetyl-L-threonine.","definition_xrefs":["PubMed:16728640","Unimod:1#T","RESID:AA0423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetylated residue","termid":"MOD:00644"},{"relation_name":"is_a","term_name":"acetylated L-threonine","termid":"MOD:01186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-acetyl-L-threonine","synonyms":[{"name":"(2S,3R)-3-(acetyloxy)-2-aminobutanoic acid","type":"exact"},{"name":"ACT_SITE O-acetylthreonine intermediate","type":"exact"},{"name":"Acetylation","type":"related"},{"name":"MOD_RES O-acetylthreonine","type":"exact"},{"name":"O-acetyl-L-threonine","type":"exact"},{"name":"O-acetylthreonine","type":"exact"},{"name":"OAcThr","type":"exact"},{"name":"threonine acetate ester","type":"exact"}],"termid":"MOD:01171"}


id: PBO:0086083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein O-mannosyltransferase; transfers mannose residues from dolichyl phosphate-D-mannose to protein serine/threonine residues; acts in a complex with Pmt5p, can instead interact with Pmt1p in some conditions; antifungal drug target; PMT3 has a paralog, PMT2, that arose from the whole genome duplication","termid":"PBO:0086083"}


id: PBO:0071702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 like","termid":"PBO:0071702"}


id: PBO:0089945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-like protein","termid":"PBO:0089945"}


id: GO:0006689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of ganglioside, a ceramide oligosaccharide carrying, in addition to other sugar residues, one or more sialic residues.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglioside metabolic process","termid":"GO:0001573"},{"relation_name":"is_a","term_name":"glycosphingolipid catabolic process","termid":"GO:0046479"},{"relation_name":"is_a","term_name":"ceramide catabolic process","termid":"GO:0046514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"ganglioside catabolic process","synonyms":[{"name":"ganglioside breakdown","type":"exact"},{"name":"ganglioside catabolism","type":"exact"},{"name":"ganglioside degradation","type":"exact"}],"termid":"GO:0006689"}


id: GO:0031318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a folic acid stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of nutrient","termid":"GO:0009594"},{"relation_name":"is_a","term_name":"response to folic acid","termid":"GO:0051593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of folic acid","synonyms":[{"name":"detection of folate","type":"exact"},{"name":"folate detection","type":"exact"},{"name":"folate sensing","type":"exact"},{"name":"folic acid detection","type":"exact"},{"name":"folic acid sensing","type":"exact"}],"termid":"GO:0031318"}


id: GO:1903774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of viral budding via host ESCRT complex.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:als","PMID:24878737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral budding via host ESCRT complex","termid":"GO:1903772"},{"relation_name":"is_a","term_name":"positive regulation of viral life cycle","termid":"GO:1903902"},{"relation_name":"positively_regulates","term_name":"viral budding via host ESCRT complex","termid":"GO:0039702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of viral budding via host ESCRT complex","synonyms":[{"name":"activation of viral budding through the ESCRT machinery","type":"related"},{"name":"activation of viral budding via host ESCRT complex","type":"narrow"},{"name":"positive regulation of viral budding through the ESCRT machinery","type":"related"},{"name":"up regulation of viral budding through the ESCRT machinery","type":"related"},{"name":"up regulation of viral budding via host ESCRT complex","type":"exact"},{"name":"up-regulation of viral budding through the ESCRT machinery","type":"related"},{"name":"up-regulation of viral budding via host ESCRT complex","type":"exact"},{"name":"upregulation of viral budding through the ESCRT machinery","type":"related"},{"name":"upregulation of viral budding via host ESCRT complex","type":"exact"}],"termid":"GO:1903774"}


id: FYPO:0007966
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which heterothallic haploid cells failing chromosome segregation and  consequently nuclear division fail to displace the nucleus from the septation site. This is normally mediated by actin cables.","definition_xrefs":["PomBase:mlr","PMID:33506191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized nucleus during vegetative growth","termid":"FYPO:0002071"},{"relation_name":"output_of","term_name":"abolished mitotic sister chromatid separation","termid":"FYPO:0001946"},{"relation_name":"output_of","term_name":"abnormal actin cables","termid":"FYPO:0002435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000337","FYPO:0000641","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abolished nuclear displacement from cell division site after abolished mitotic sister chromatid separation","termid":"FYPO:0007966"}


id: GO:0071319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a benzoic acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"response to benzoic acid","termid":"GO:0080021"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to benzoic acid","termid":"GO:0071319"}


id: GO:1902305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sodium ion transmembrane transport.","definition_xrefs":["PMID:18591664","GOC:mtg_cardiac_conduct_nov11","GOC:rl","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sodium ion transport","termid":"GO:0002028"},{"relation_name":"is_a","term_name":"regulation of monoatomic cation transmembrane transport","termid":"GO:1904062"},{"relation_name":"regulates","term_name":"sodium ion transmembrane transport","termid":"GO:0035725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of sodium ion transmembrane transport","synonyms":[{"name":"regulation of sodium ion membrane transport","type":"exact"}],"termid":"GO:1902305"}


id: PBO:0018271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO activating enzyme E1-type Uba2 (predicted)","termid":"PBO:0018271"}


id: PBO:0078303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-8","termid":"PBO:0078303"}


id: PBO:0027922
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_cell-cell_contact_point_during_conjugation","termid":"PBO:0027922"}


id: PBO:0074050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A30 antisense RNA 1","termid":"PBO:0074050"}


id: GO:1904118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of otic vesicle morphogenesis.","definition_xrefs":["PMID:25677106","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of an epithelium","termid":"GO:1905330"},{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"otic vesicle morphogenesis","termid":"GO:0071600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of otic vesicle morphogenesis","termid":"GO:1904118"}


id: FYPO:0008121
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a protein measured in the NuA4 complex is lower than normal.","definition_xrefs":["PMID:31748520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex composition","termid":"FYPO:0005003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein level in NuA4 complex","termid":"FYPO:0008121"}


id: PBO:0031838
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mating_projection_absent","termid":"PBO:0031838"}


id: PBO:0044773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 55","termid":"PBO:0044773"}


id: GO:0002923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a humoral immune response mediated by circulating immunoglobulin.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immunoglobulin mediated immune response","termid":"GO:0002889"},{"relation_name":"is_a","term_name":"regulation of humoral immune response","termid":"GO:0002920"},{"relation_name":"regulates","term_name":"humoral immune response mediated by circulating immunoglobulin","termid":"GO:0002455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of humoral immune response mediated by circulating immunoglobulin","termid":"GO:0002923"}


id: PBO:0041020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family B member 3","termid":"PBO:0041020"}


id: GO:1902501
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any HOPS complex that is part of a lysosomal membrane.","definition_xrefs":["GOC:TermGenie","PMID:23645161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar HOPS complex","termid":"GO:1902500"},{"relation_name":"part_of","term_name":"lysosomal membrane","termid":"GO:0005765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005773","GO:0005737"],"is_obsolete":false,"name":"lysosomal HOPS complex","synonyms":[{"name":"lysosomal membrane HOPS complex","type":"exact"}],"termid":"GO:1902501"}


id: GO:0009560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an uncellularized embryo sac nucleus cellularizes and acquires the specialized features of an egg cell. An example of this process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","GOC:jid","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"female gamete generation","termid":"GO:0007292"},{"relation_name":"part_of","term_name":"megagametogenesis","termid":"GO:0009561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryo sac egg cell differentiation","secondary_identifiers":["GO:0048233"],"synonyms":[{"name":"female gamete generation","type":"broad"},{"name":"female gametophyte egg cell differentiation","type":"exact"}],"termid":"GO:0009560"}


id: PBO:0048655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gap junction protein delta 4","termid":"PBO:0048655"}


id: PBO:0030745
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cellular_phosphatidylinositol-3-phosphate_level","termid":"PBO:0030745"}


id: PBO:0060437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NACA pseudogene 6","termid":"PBO:0060437"}


id: PBO:0050323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 25","termid":"PBO:0050323"}


id: PBO:0046137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5A2 pseudogene 1","termid":"PBO:0046137"}


id: FYPO:0001492
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is viable and longer than normal, and has a greater length:diameter ratio than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"viable vegetative cell with abnormal cell shape","termid":"FYPO:0002197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000005","FYPO:0000004","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"viable elongated vegetative cell","synonyms":[{"name":"elongated viable vegetative cell","type":"exact"},{"name":"viable elongated cell during vegetative growth","type":"exact"},{"name":"viable elongated vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001492"}


id: PR:Q9P6N1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg1802 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6N1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.16c","synonyms":[{"name":"Spom972h-atg1802","type":"exact"},{"name":"meiotically up-regulated gene 179 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6N1"}


id: PBO:0073912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 3","termid":"PBO:0073912"}


id: PBO:0067316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 402, pseudogene","termid":"PBO:0067316"}


id: PBO:0087096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal assembly factor and 66S pre-ribosomal particle constituent; subunit of the Nop7-subcomplex (PeBoW complex), required for an early nucleolar step in pre-60S ribosomal particle maturation; interaction of its ubiquitin-like (UBL) domain with the MIDAS domain in the Rea1p tail triggers release of the subcomplex and possibly other biogenesis factors via cycles of ATP hydrolysis; involved in the processing of 27S pre-rRNA; contains an N-terminal UBL domain and seven C-terminal WD repeats","termid":"PBO:0087096"}


id: PR:Q9UTS5-1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A zinc finger protein zas1 (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9UTS5-1.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTS5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc finger protein zas1 (Schizosaccharomyces pombe 972h-)","termid":"PR:Q9UTS5"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein zas1 isoform 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:Q9UTS5-1"],"synonyms":[{"name":"Spom972h-zas1/iso:1","type":"exact"},{"name":"zinc finger protein zas1 isoform zas1B (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTS5-1"}


id: PR:P87137
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U3 small nucleolar RNA-associated protein 14 B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C57A7.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.06","secondary_identifiers":["UniProtKB:P87137"],"synonyms":[{"name":"Spom972h-Utp14b","type":"exact"}],"termid":"PR:P87137"}


id: SO:0000811
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cDNA clone invalidated by genomic contamination.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"invalidated_by_genomic_contamination","termid":"SO:0000414"},{"relation_name":"is_a","term_name":"invalidated_cDNA_clone","termid":"SO:0000809"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genomically_contaminated_cDNA_clone","synonyms":[{"name":"genomically contaminated cDNA clone","type":"exact"}],"termid":"SO:0000811"}


id: GO:0015840
data:
  {"annotated_genes":["SJAG_02125"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071918"}]},"cv_name":"biological_process","definition":"The directed movement of urea into, out of or within the cell. Urea is the water-soluble compound H2N-CO-NH2.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"one-carbon compound transport","termid":"GO:0019755"},{"relation_name":"is_a","term_name":"amide transport","termid":"GO:0042886"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02125":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"urea transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015840","terms_by_termid":{"GO:0071918":null}}


id: PBO:0043123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium and integrin binding 1","termid":"PBO:0043123"}


id: SO:0002013
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes the reduction of a the 5'UTR with regard to the reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_variant","termid":"SO:0001623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_truncation","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html"],"synonyms":[{"name":"5 prime UTR truncation","type":"exact"},{"name":"Jannovar:5_prime_utr_truncation","type":"exact"},{"name":"snpEff:UTR_5_DELETED","type":"exact"}],"termid":"SO:0002013"}


id: GO:1990576
data:
  {"annotated_genes":["SJAG_01699"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111603],"is_not":false,"summary":null,"term":"GO:1990576"}]},"cv_name":"molecular_function","definition":"Combining with an extracellular glucose molecule and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["PMID:15667320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled glucose receptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G-protein coupled glucose receptor activity","type":"exact"}],"termid":"GO:1990576","terms_by_termid":{"GO:1990576":null}}


id: PBO:0041240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 105","termid":"PBO:0041240"}


id: PBO:0006185
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_substrate","termid":"PBO:0006185"}


id: PBO:0027074
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiseptate_vegetative_cell_with_binucleate_and_anucleate_compartments","termid":"PBO:0027074"}


id: PBO:0048846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglucosamine-1-phosphate transferase subunits alpha and beta","termid":"PBO:0048846"}


id: GO:0006671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytosphingosine, (2S,3S,4R)-2-aminooctadecane-1,3,4-triol, a constituent of many plant sphingolipids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol metabolic process","termid":"GO:0019751"},{"relation_name":"is_a","term_name":"sphingoid metabolic process","termid":"GO:0046519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"phytosphingosine metabolic process","synonyms":[{"name":"phytosphingosine metabolism","type":"exact"}],"termid":"GO:0006671"}


id: PBO:0062248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BN member 2 pseudogene","termid":"PBO:0062248"}


id: PBO:0064643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic progenitor cell differentiation and proliferation factor like","termid":"PBO:0064643"}


id: PBO:0044914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DGAT2 divergent transcript","termid":"PBO:0044914"}


id: PBO:0074883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 62A","termid":"PBO:0074883"}


id: PBO:0063998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 32","termid":"PBO:0063998"}


id: GO:1903517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of single strand break repair.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GO_REF:0000058","GOC:rl","PMID:17395247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA repair","termid":"GO:0045738"},{"relation_name":"is_a","term_name":"regulation of single strand break repair","termid":"GO:1903516"},{"relation_name":"negatively_regulates","term_name":"single strand break repair","termid":"GO:0000012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006281"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"negative regulation of single strand break repair","synonyms":[{"name":"down regulation of single strand break repair","type":"exact"},{"name":"down-regulation of single strand break repair","type":"exact"},{"name":"downregulation of single strand break repair","type":"exact"},{"name":"inhibition of single strand break repair","type":"narrow"}],"termid":"GO:1903517"}


id: GO:0034977
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the precursor form of NF-kappaB (p105), the NF-kappaB inhibitor ABIN-2, and the kinase TPL-2 (MAP3K8); the complex stabilizes TPL-2 and is involved in signaling in lipopolysaccharide (LPS)-stimulated macrophages.","definition_xrefs":["PMID:15169888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ABIN2-NFKB1-MAP3K8 complex","synonyms":[{"name":"ABIN2-NFKB1-TPL-1 complex","type":"exact"}],"termid":"GO:0034977"}


id: GO:0033373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protease is maintained in a secretory granule in a mast cell and prevented from moving elsewhere.","definition_xrefs":["GOC:tb","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protein location in mast cell secretory granule","termid":"GO:0033370"},{"relation_name":"part_of","term_name":"protease localization to mast cell secretory granule","termid":"GO:0033368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of protease location in mast cell secretory granule","synonyms":[{"name":"maintenance of protease localization in mast cell secretory granule","type":"related"},{"name":"mast cell protease retention","type":"exact"}],"termid":"GO:0033373"}


id: PR:000059631
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A kinetochore protein spc7 (Schizosaccharomyces pombe) that has been phosphorylated on residues at positions equivalent to Thr-257, Thr-338, Thr-366, Thr-395, Thr-422, Thr-453, Thr-507, Thr-529, and Thr-552 of the amino acid sequence represented by UniProtKB:O59757. Example: UniProtKB:O59757, Thr-257/Thr-338/Thr-366/Thr-395/Thr-422/Thr-453/Thr-507/Thr-529/Thr-552, MOD:00047.","definition_xrefs":["PMID:22521786","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spc7/Phos-MELT","pombase_gene_id":"SPCC1020.02","synonyms":[{"name":"PomBase_original_PRO_term_name: kinetochore protein spc7 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spc7/Phos-MELT","type":"exact"},{"name":"Spom-spc7/Phos:1","type":"exact"},{"name":"UniProtKB:O59757, Thr-257/Thr-338/Thr-366/Thr-395/Thr-422/Thr-453/Thr-507/Thr-529/Thr-552, MOD:00047","type":"narrow"}],"termid":"PR:000059631"}


id: GO:0004769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-oxo-delta(5)-steroid = a 3-oxo-delta(4)-steroid.","definition_xrefs":["EC:5.3.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"steroid delta-isomerase activity","secondary_identifiers":["Reactome:R-HSA-193073","Reactome:R-HSA-195690","RHEA:14709","Reactome:R-HSA-193052","MetaCyc:STEROID-DELTA-ISOMERASE-RXN","Reactome:R-HSA-193961","Reactome:R-HSA-6807052"],"synonyms":[{"name":"3-oxosteroid delta5-delta4-isomerase activity","type":"related"},{"name":"3-oxosteroid isomerase activity","type":"related"},{"name":"delta(5)-3-keto steroid isomerase activity","type":"related"},{"name":"delta(5)-3-ketosteroid isomerase activity","type":"related"},{"name":"delta(5)-3-oxosteroid isomerase activity","type":"related"},{"name":"delta(5)-steroid isomerase activity","type":"related"},{"name":"delta5(or delta4)-3-keto steroid isomerase activity","type":"related"},{"name":"delta5-3-keto steroid isomerase activity","type":"related"},{"name":"delta5-3-ketosteroid isomerase activity","type":"related"},{"name":"delta5-3-oxosteroid isomerase activity","type":"related"},{"name":"delta5-ketosteroid isomerase activity","type":"related"},{"name":"delta5-steroid isomerase activity","type":"related"},{"name":"hydroxysteroid isomerase activity","type":"related"},{"name":"steroid D-isomerase activity","type":"exact"},{"name":"steroid isomerase activity","type":"related"}],"termid":"GO:0004769"}


id: PR:Q9C1X1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pwp2 gene.","definition_xrefs":["UniProtKB:Q9C1X1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periodic tryptophan protein 2 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.04c","synonyms":[{"name":"Spom972h-pwp2","type":"exact"}],"termid":"PR:Q9C1X1"}


id: GO:0071563
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is involved in transport of vacuoles to a newly formed daughter cell. In yeast, this complex is composed of Myo2p, Vac17p, and Vac8p.","definition_xrefs":["GOC:jp","PMID:12594460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"Myo2p-Vac17p-Vac8p transport complex","termid":"GO:0071563"}


id: PBO:0070069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 26, pseudogene","termid":"PBO:0070069"}


id: PBO:0084133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hexose transporter with moderate affinity for glucose; induced in the presence of non-fermentable carbon sources, induced by a decrease in growth rate, contains an extended N-terminal domain relative to other HXTs; HXT5 has a paralog, HXT3, that arose from the whole genome duplication","termid":"PBO:0084133"}


id: PBO:0036326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal protein Pex11 paralog (predicted)","termid":"PBO:0036326"}


id: PBO:0069428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 693, pseudogene","termid":"PBO:0069428"}


id: GO:0097277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process involved in the maintenance of an internal steady state of urea at the level of the cell.","definition_xrefs":["PMID:12695560","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular urea homeostasis (obsolete GO:0097277)","termid":"GO:0097277"}


id: FYECO:0000067
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which lauric acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ lauric acid","termid":"FYECO:0000067"}


id: PBO:0045083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta like non-canonical Notch ligand 2","termid":"PBO:0045083"}


id: GO:1904656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sensory perception of sweet taste.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:mr","PMID:1716172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sensory perception","termid":"GO:0051931"},{"relation_name":"regulates","term_name":"sensory perception of sweet taste","termid":"GO:0050916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sensory perception of sweet taste","synonyms":[{"name":"regulation of sweet taste perception","type":"exact"}],"termid":"GO:1904656"}


id: PBO:0057436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 553","termid":"PBO:0057436"}


id: GO:0010679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of cinnamic acid, 3-phenyl-2-propenoic acid, which is then utilized in the metabolism of salicylic acid.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete cinnamic acid biosynthetic process involved in salicylic acid metabolism (obsolete GO:0010679)","termid":"GO:0010679"}


id: PBO:0088119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar cation channel; mediates release of Ca(2+) from the vacuole in response to hyperosmotic shock","termid":"PBO:0088119"}


id: GO:0042690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of crystal cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of crystal cell differentiation","termid":"GO:0042689"},{"relation_name":"is_a","term_name":"negative regulation of hemocyte differentiation","termid":"GO:0045611"},{"relation_name":"negatively_regulates","term_name":"crystal cell differentiation","termid":"GO:0042688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of crystal cell differentiation","synonyms":[{"name":"down regulation of crystal cell differentiation","type":"exact"},{"name":"down-regulation of crystal cell differentiation","type":"exact"},{"name":"downregulation of crystal cell differentiation","type":"exact"},{"name":"inhibition of crystal cell differentiation","type":"narrow"}],"termid":"GO:0042690"}


id: PBO:0001676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine racemase (predicted)","termid":"PBO:0001676"}


id: PBO:0054886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2300","termid":"PBO:0054886"}


id: GO:0033801
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + vitexin 2''-O-beta-L-rhamnoside = S-adenosyl-L-homocysteine + 7-O-methylvitexin 2''-O-beta-L-rhamnoside.","definition_xrefs":["EC:2.1.1.153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"vitexin 2''-O-rhamnoside 7-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-4981","RHEA:11432"],"synonyms":[{"name":"S-adenosyl-L-methionine:vitexin-2''-O-beta-L-rhamnoside 7-O-methyltransferase activity","type":"related"}],"termid":"GO:0033801"}


id: PR:Q09857
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A general vesicular transport factor p115 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01822","PANTHER:PTHR10013:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intracellular protein transport protein uso1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.03c","secondary_identifiers":["UniProtKB:Q09857"],"synonyms":[{"name":"Spom972h-USO1","type":"exact"}],"termid":"PR:Q09857"}


id: GO:0098995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption by a symbiont of host cell wall lipopolysaccharides to allow entry into the host cell. For example a phage entering a Gram-negative bacterium may actively break down outer membrane lipopolysaccharides.","definition_xrefs":["GOC:dos","VZ:3940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cell wall","termid":"GO:0052009"},{"relation_name":"part_of","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host cell via disruption of host cell envelope lipopolysaccharide","secondary_identifiers":["VZ:3939"],"synonyms":[{"name":"degradation of host cell envelope lipopolysaccharide during viral entry","type":"exact"},{"name":"degradation of host lipopolysaccharide during virus entry","type":"exact"},{"name":"disassembly by virus of outer membrane lipopolysaccharide during viral entry","type":"narrow"},{"name":"disruption by virus of host envelope lipopolysaccharide during virus entry","type":"exact"}],"termid":"GO:0098995"}


id: PBO:0055878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 4","termid":"PBO:0055878"}


id: PBO:0083579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; similar to YLR334C and YOL106W","termid":"PBO:0083579"}


id: GO:0051233
data:
  {"annotated_genes":["SJAG_01297","SJAG_01371","SJAG_03048","SJAG_00723","SJAG_01909","SJAG_03345","SJAG_04412","SJAG_02045","SJAG_00840","SJAG_02336","SJAG_04140","SJAG_02542","SJAG_04464","SJAG_04745","SJAG_03073","SJAG_03959","SJAG_02266","SJAG_01805","SJAG_00930","SJAG_01429","SJAG_00762","SJAG_01837","SJAG_00697","SJAG_04841","SJAG_00082"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97478,99603,114752,112743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990385"},{"annotations":[87430,96591,85684,89846,97107,87968,97481,107954,111222,113642,85318,114754,99605,99724,107067,112744,87030,104302,91819,99954,107248,90821,86050,98413,93345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990023"}]},"cv_name":"cellular_component","definition":"The area in the center of the spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["GOC:ai","PMID:15296749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"spindle","termid":"GO:0005819"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00697":null,"SJAG_00723":null,"SJAG_00762":null,"SJAG_00840":null,"SJAG_00930":null,"SJAG_01297":null,"SJAG_01371":null,"SJAG_01429":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01909":null,"SJAG_02045":null,"SJAG_02266":null,"SJAG_02336":null,"SJAG_02542":null,"SJAG_03048":null,"SJAG_03073":null,"SJAG_03345":null,"SJAG_03959":null,"SJAG_04140":null,"SJAG_04412":null,"SJAG_04464":null,"SJAG_04745":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"spindle midzone","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"central spindle","type":"exact"},{"name":"spindle equator","type":"exact"}],"termid":"GO:0051233","terms_by_termid":{"GO:1990023":null,"GO:1990385":null}}


id: PBO:0085976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; proposed involvement in transport based on mass spectrometry analysis of copurifying proteins; null mutant is viable","termid":"PBO:0085976"}


id: PBO:0029596
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_plasma_membrane_during_vegetative_growth","termid":"PBO:0029596"}


id: PBO:0031860
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_component_assembly","termid":"PBO:0031860"}


id: GO:0006530
data:
  {"annotated_genes":["SJAG_00881"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102034],"is_not":false,"summary":null,"term":"GO:0006530"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of asparagine, 2-amino-3-carbamoylpropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asparagine metabolic process","termid":"GO:0006528"},{"relation_name":"is_a","term_name":"glutamine family amino acid catabolic process","termid":"GO:0009065"},{"relation_name":"is_a","term_name":"aspartate family amino acid catabolic process","termid":"GO:0009068"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248","GO:0006520"],"is_obsolete":false,"name":"asparagine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"asparagine breakdown","type":"exact"},{"name":"asparagine catabolism","type":"exact"},{"name":"asparagine degradation","type":"exact"}],"termid":"GO:0006530","terms_by_termid":{"GO:0006530":null}}


id: GO:0050264
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H+ + O2 + rifamycin B = H2O2 + rifamycin O.","definition_xrefs":["RHEA:11292","EC:1.10.3.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor","termid":"GO:0016682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"rifamycin-B oxidase activity","secondary_identifiers":["KEGG_REACTION:R03736","MetaCyc:RIFAMYCIN-B-OXIDASE-RXN"],"synonyms":[{"name":"rifamycin B oxidase activity","type":"related"},{"name":"rifamycin-B-oxidase activity","type":"exact"},{"name":"rifamycin-B:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0050264"}


id: GO:0046364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of monosaccharides, polyhydric alcohols containing either an aldehyde or a keto group and between three to ten or more carbon atoms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide metabolic process","termid":"GO:0005996"},{"relation_name":"is_a","term_name":"carbohydrate biosynthetic process","termid":"GO:0016051"},{"relation_name":"is_a","term_name":"small molecule biosynthetic process","termid":"GO:0044283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"monosaccharide biosynthetic process","synonyms":[{"name":"monosaccharide anabolism","type":"exact"},{"name":"monosaccharide biosynthesis","type":"exact"},{"name":"monosaccharide formation","type":"exact"},{"name":"monosaccharide synthesis","type":"exact"}],"termid":"GO:0046364"}


id: GO:1904857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endothelial cell chemotaxis to vascular endothelial growth factor.","definition_xrefs":["GOC:rph","GOC:TermGenie","PMID:21885851","GOC:BHF_miRNA","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"is_a","term_name":"regulation of chemotaxis","termid":"GO:0050920"},{"relation_name":"is_a","term_name":"regulation of cellular response to vascular endothelial growth factor stimulus","termid":"GO:1902547"},{"relation_name":"regulates","term_name":"endothelial cell chemotaxis to vascular endothelial growth factor","termid":"GO:0090668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endothelial cell chemotaxis to vascular endothelial growth factor","termid":"GO:1904857"}


id: PR:Q9Y7R7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC306.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7R7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein C306.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.07c","synonyms":[{"name":"Spom972h-SPCC306.07c","type":"exact"},{"name":"U3 snoRNP-associated protein C306.07c (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7R7"}


id: PBO:0028647
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sister_chromatid_separation_during_meiosis_I","termid":"PBO:0028647"}


id: PBO:0061387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 47","termid":"PBO:0061387"}


id: PBO:0000733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase Hat1","termid":"PBO:0000733"}


id: PR:P79071
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 60S ribosomal protein L6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10715:SF0","OMA:SCHPO04682"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.18","secondary_identifiers":["UniProtKB:P79071"],"synonyms":[{"name":"Spom972h-RPL6","type":"exact"}],"termid":"PR:P79071"}


id: PBO:0003036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine racemase Alr2 (predicted)","termid":"PBO:0003036"}


id: GO:0102326
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-6-oxo-6-(2,3-dihydroxyphenyl)-hexa-2,4-dienoate + H2O = 2,3-dihydroxybenzoate + 2-oxopent-4-enoate + H+.","definition_xrefs":["EC:3.7.1.8","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-hydroxy-6-oxo-6-(2,3-dihydroxyphenyl)-hexa-2,4-dienoate hydrolase activity","secondary_identifiers":["MetaCyc:RXN-13171"],"termid":"GO:0102326"}


id: PBO:0027360
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_1,3-beta-D-glucan_synthase_activity_during_vegetative_growth","termid":"PBO:0027360"}


id: PBO:0056023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSP1 pseudogene 1","termid":"PBO:0056023"}


id: GO:0102553
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 S-adenosyl-L-methionine + a [pyruvate dehydrogenase E2 protein] N6-octanoyl-L-lysine + 2 a sulfurated [sulfur carrier] = 2 L-methionine + 2 5'-deoxyadenosine + 2 H+ + a [pyruvate dehydrogenase E2 protein] N6-lipoyl-L-lysine + 2 an unsulfurated [sulfur carrier].","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoyl synthase activity (acting on pyruvate dehydrogenase E2 protein) (obsolete GO:0102553)","termid":"GO:0102553"}


id: GO:0106345
data:
  {"annotated_genes":["SJAG_00281","SJAG_01432"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97089,101134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030267"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: glycolate + NAD(P)+ = glyoxylate + NAD(P)H.","definition_xrefs":["PMID:3548703","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00281":null,"SJAG_01432":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glyoxylate reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106345","terms_by_termid":{"GO:0030267":null}}


id: PBO:0052114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily C member 2","termid":"PBO:0052114"}


id: PBO:0063894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymeric immunoglobulin receptor","termid":"PBO:0063894"}


id: PBO:0004140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mre11 complex subunit Nbs1","termid":"PBO:0004140"}


id: GO:0090384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial attachment of a phagosome membrane to a lysosome membrane. Docking requires only that the proteins come close enough to interact and adhere.","definition_xrefs":["GOC:kmv","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle docking","termid":"GO:0048278"},{"relation_name":"part_of","term_name":"phagolysosome assembly","termid":"GO:0001845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0016192","GO:0051179","GO:0140056","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"phagosome-lysosome docking","synonyms":[{"name":"lysosome recruitment to phagosome","type":"exact"}],"termid":"GO:0090384"}


id: PBO:0001790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase (predicted)","termid":"PBO:0001790"}


id: PBO:0080123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAMP1 antisense RNA 1","termid":"PBO:0080123"}


id: GO:0009946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the proximal/distal axis. The proximal/distal axis is defined by a line that runs from main body (proximal end) of an organism outward (distal end).","definition_xrefs":["GOC:go_curators","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"part_of","term_name":"proximal/distal pattern formation","termid":"GO:0009954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal/distal axis specification","synonyms":[{"name":"proximal/distal axis determination","type":"related"},{"name":"proximodistal axis specification","type":"exact"}],"termid":"GO:0009946"}


id: PBO:0070932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 40","termid":"PBO:0070932"}


id: GO:0048861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a leukemia inhibitory factor to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme-linked receptor protein signaling pathway","termid":"GO:0007167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"leukemia inhibitory factor signaling pathway","synonyms":[{"name":"leukemia inhibitory factor signalling pathway","type":"exact"}],"termid":"GO:0048861"}


id: PBO:0091438
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ncRNA feature moved from the opposite strand","termid":"PBO:0091438"}


id: PBO:0058149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4444-2","termid":"PBO:0058149"}


id: FYPO:0008179
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which monomethylation of lysine at position 20 of histone H4 is decreased.","definition_xrefs":["PMID:15550243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H4-K20 methylation during vegetative growth","termid":"FYPO:0004215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone H4-K20 monomethylation during vegetative growth","termid":"FYPO:0008179"}


id: GO:0072046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Coordinated organization of groups of cells in the plane of an epithelium that contributes to the shaping of a nephron.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of planar polarity","termid":"GO:0001736"},{"relation_name":"part_of","term_name":"nephron morphogenesis","termid":"GO:0072028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of planar polarity involved in nephron morphogenesis","synonyms":[{"name":"establishment of planar cell polarity involved in nephron morphogenesis","type":"narrow"}],"termid":"GO:0072046"}


id: GO:0032201
data:
  {"annotated_genes":["SJAG_03624"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93254],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0032215"}]},"cv_name":"biological_process","definition":"The process in which telomeric DNA is synthesized semi-conservatively by the conventional replication machinery and telomeric accessory factors as part of cell cycle DNA replication.","definition_xrefs":["PMID:16598261","GOC:BHF_telomere","GOC:rl","GOC:BHF","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance","termid":"GO:0000723"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"nuclear DNA replication","termid":"GO:0033260"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0006259","GO:0008150","GO:0006260","GO:0032200"],"is_obsolete":false,"name":"telomere maintenance via semi-conservative replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"equal telomere replication","type":"related"},{"name":"telomeric fork progression","type":"narrow"},{"name":"telomeric replication fork progression","type":"narrow"}],"termid":"GO:0032201","terms_by_termid":{"GO:0032215":null}}


id: PBO:0036002
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_sumoylation_during_vegetative_growth","termid":"PBO:0036002"}


id: GO:0052048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the other (symbiont) organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via secreted substance (obsolete GO:0052048)","synonyms":[{"name":"interaction with host via secreted substance during symbiotic interaction","type":"related"},{"name":"interaction with host via secreted substance involved in symbiotic interaction","type":"related"}],"termid":"GO:0052048"}


id: PBO:0076024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 19B (pseudogene)","termid":"PBO:0076024"}


id: PBO:0055794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl oxidase like 3","termid":"PBO:0055794"}


id: PR:O13873
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A PCI domain-containing protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein CSN12 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.08","secondary_identifiers":["UniProtKB:O13873"],"synonyms":[{"name":"Spom972h-PCID2","type":"exact"}],"termid":"PR:O13873"}


id: GO:1905551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to endoplasmic reticulum.","definition_xrefs":["GOC:TermGenie","PMID:22768340","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"is_a","term_name":"regulation of protein localization to endoplasmic reticulum","termid":"GO:1905550"},{"relation_name":"negatively_regulates","term_name":"protein localization to endoplasmic reticulum","termid":"GO:0070972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to endoplasmic reticulum","synonyms":[{"name":"down regulation of protein localisation in endoplasmic reticulum","type":"exact"},{"name":"down regulation of protein localization in ER","type":"exact"},{"name":"down regulation of protein localization in endoplasmic reticulum","type":"exact"},{"name":"down regulation of protein localization to endoplasmic reticulum","type":"exact"},{"name":"down-regulation of protein localisation in endoplasmic reticulum","type":"exact"},{"name":"down-regulation of protein localization in ER","type":"exact"},{"name":"down-regulation of protein localization in endoplasmic reticulum","type":"exact"},{"name":"down-regulation of protein localization to endoplasmic reticulum","type":"exact"},{"name":"downregulation of protein localisation in endoplasmic reticulum","type":"exact"},{"name":"downregulation of protein localization in ER","type":"exact"},{"name":"downregulation of protein localization in endoplasmic reticulum","type":"exact"},{"name":"downregulation of protein localization to endoplasmic reticulum","type":"exact"},{"name":"inhibition of protein localisation in endoplasmic reticulum","type":"narrow"},{"name":"inhibition of protein localization in ER","type":"narrow"},{"name":"inhibition of protein localization in endoplasmic reticulum","type":"narrow"},{"name":"inhibition of protein localization to endoplasmic reticulum","type":"narrow"},{"name":"negative regulation of protein localisation in endoplasmic reticulum","type":"exact"},{"name":"negative regulation of protein localization in ER","type":"exact"},{"name":"negative regulation of protein localization in endoplasmic reticulum","type":"exact"}],"termid":"GO:1905551"}


id: GO:0019176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydroneopterin monophosphate = dihydroneopterin + phosphate.","definition_xrefs":["MetaCyc:DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides","termid":"GO:0016818"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"dihydroneopterin monophosphate phosphatase activity","secondary_identifiers":["RHEA:25306"],"synonyms":[{"name":"dihydroneopterin monophosphate dephosphorylase activity","type":"exact"}],"termid":"GO:0019176"}


id: PBO:0043678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin 2B","termid":"PBO:0043678"}


id: GO:0018805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fumarate + toluene = 2-benzylsuccinate.","definition_xrefs":["RHEA:10416","EC:4.1.99.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"benzylsuccinate synthase activity","secondary_identifiers":["KEGG_REACTION:R05598","MetaCyc:RXN-863","UM-BBD_enzymeID:r0328"],"synonyms":[{"name":"benzylsuccinate fumarate-lyase (toluene-forming)","type":"related"},{"name":"benzylsuccinate fumarate-lyase activity","type":"related"}],"termid":"GO:0018805"}


id: FYPO:0003646
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of pyrithiamine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002682","FYPO:0001985","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"resistance to pyrithiamine","synonyms":[{"name":"resistance to pyrithiamine during mitotic cell cycle","type":"related"},{"name":"resistance to pyrithiamine during vegetative growth","type":"exact"},{"name":"resistant to pyrithiamine","type":"exact"}],"termid":"FYPO:0003646"}


id: PBO:0052145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNIP1 overlapping transcript 1","termid":"PBO:0052145"}


id: PBO:0084377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Long chain fatty acyl-CoA synthetase; activates imported fatty acids with a preference for C16:0-C18:0 chain lengths; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery","termid":"PBO:0084377"}


id: PBO:0038572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABR antisense RNA 1","termid":"PBO:0038572"}


id: GO:0051120
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 12S-5Z,8Z,10E,14Z-12-hydro(pero)xy-eicosa-5,8,10,14-tetraenoic acid = (5Z,9E,14Z)-(8,11R,12S)-11,12-epoxy-8-hydroxyicosa-5,9,14-trienoate. 12S-5Z,8Z,10E,14Z-12-hydro(pero)xy-eicosa-5,8,10,14-tetraenoic acid is also known as 12S-HpETE, and (5Z,9E,14Z)-(8,11R,12S)-11,12-epoxy-8-hydroxyicosa-5,9,14-trienoate as hepoxilin A3.","definition_xrefs":["PMID:15123652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isomerase activity","termid":"GO:0016853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"hepoxilin A3 synthase activity","secondary_identifiers":["Reactome:R-HSA-2161794","Reactome:R-HSA-8942208"],"termid":"GO:0051120"}


id: PBO:0027103
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_termination_of_RNA_polymerase_II_transcription_at_highly_transcribed_protein-coding_genes","termid":"PBO:0027103"}


id: GO:0051160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of xylitol, a five-carbon sugar alcohol derived from xylose by reduction of the carbonyl group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentitol catabolic process","termid":"GO:0019527"},{"relation_name":"is_a","term_name":"xylitol metabolic process","termid":"GO:0051164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"xylitol catabolic process","synonyms":[{"name":"L-xylitol breakdown","type":"exact"},{"name":"L-xylitol catabolism","type":"exact"},{"name":"L-xylitol degradation","type":"exact"}],"termid":"GO:0051160"}


id: GO:0010715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of extracellular matrix disassembly. Extracellular matrix disassembly is a process that results in the breakdown of the extracellular matrix.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extracellular matrix organization","termid":"GO:1903053"},{"relation_name":"regulates","term_name":"extracellular matrix disassembly","termid":"GO:0022617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of extracellular matrix disassembly","synonyms":[{"name":"regulation of extracellular matrix breakdown","type":"exact"},{"name":"regulation of extracellular matrix degradation","type":"exact"}],"termid":"GO:0010715"}


id: PBO:0058384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4756","termid":"PBO:0058384"}


id: PBO:0047391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 31","termid":"PBO:0047391"}


id: PBO:0046906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 25 member G","termid":"PBO:0046906"}


id: PBO:0087543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of ribosome-associated quality control trigger complex (RQT); putative RNA helicase related to Ski2p; involved in translation inhibition of non-poly(A) mRNAs; required for repressing propagation of dsRNA viruses; human homolog is ASCC3","termid":"PBO:0087543"}


id: PR:Q10145
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nab3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C3H8.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H8.09c","synonyms":[{"name":"Spom972h-nab3","type":"exact"}],"termid":"PR:Q10145"}


id: GO:1901678
data:
  {"annotated_genes":["SJAG_04743","SJAG_02834","SJAG_02735","SJAG_02457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140466"},{"annotations":[61453,61556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044718"},{"annotations":[108858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015891"},{"annotations":[61557,106839,106840,61454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"}]},"cv_name":"biological_process","definition":"The directed movement of an iron coordination entity into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron ion transport","termid":"GO:0006826"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02457":null,"SJAG_02735":null,"SJAG_02834":null,"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"iron coordination entity transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:1901678","terms_by_termid":{"GO:0015891":null,"GO:0033214":null,"GO:0044718":null,"GO:0140466":null}}


id: PBO:0080901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 1","termid":"PBO:0080901"}


id: PBO:0073158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC61 translocon subunit gamma","termid":"PBO:0073158"}


id: PBO:0079466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TVP23C pseudogene 2","termid":"PBO:0079466"}


id: PBO:0071085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 87","termid":"PBO:0071085"}


id: PBO:0066960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 262","termid":"PBO:0066960"}


id: PBO:0005907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid permease family","termid":"PBO:0005907"}


id: PBO:0072667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulon 4 receptor like 2","termid":"PBO:0072667"}


id: GO:1905543
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds interleukin-15 (IL-15) and that consists of, at a minimum, an interleukin, an alpha, beta and gamma chain as well as optional additional kinase subunits. The alpha chain is unique to binds IL-15 while it shares the beta chain with the IL-2 receptor and the cytokine receptor common gamma chain with multiple interleukin receptors.","definition_xrefs":["GOC:TermGenie","GOC:bhm","PMID:23104097","GO_REF:0000088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"interleukin-15 receptor complex","synonyms":[{"name":"IL-15 receptor complex","type":"exact"},{"name":"IL-15-receptor complex","type":"exact"},{"name":"IL15 receptor complex","type":"exact"},{"name":"IL15-receptor complex","type":"exact"},{"name":"interleukin-15-receptor complex","type":"exact"}],"termid":"GO:1905543"}


id: PATO:0000841
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000841 relative auditory acuity value (obsolete PATO:0000841)","termid":"PATO:0000841"}


id: PBO:0078272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 8-1","termid":"PBO:0078272"}


id: PBO:0088004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type 2C protein phosphatase (PP2C); dephosphorylates Hog1p, inactivating osmosensing MAPK cascade; involved in Fus3p activation during pheromone response; deletion affects precursor tRNA splicing, mitochondrial inheritance, and sporulation","termid":"PBO:0088004"}


id: PBO:0067736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 35","termid":"PBO:0067736"}


id: PBO:0083380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps both the verified gene PDI1/YCL043C and the uncharacterized gene YCL042W","termid":"PBO:0083380"}


id: PBO:0027380
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-nuclear_pore_aggregation_in_cytoplasm","termid":"PBO:0027380"}


id: PBO:0046632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 13","termid":"PBO:0046632"}


id: GO:1905292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neural crest cell differentiation.","definition_xrefs":["GO_REF:0000058","GOC:rl","GOC:BHF","GOC:TermGenie","PMID:15073157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stem cell differentiation","termid":"GO:2000736"},{"relation_name":"regulates","term_name":"neural crest cell differentiation","termid":"GO:0014033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neural crest cell differentiation","termid":"GO:1905292"}


id: MOD:01246
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00812 after formula correction. Remap to MOD:00812.","definition_xrefs":["PubMed:3311742","PubMed:3578767","Unimod:295#S","PubMed:11344537","PubMed:15189151"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01246 fucosylated -site S (obsolete MOD:01246)","synonyms":[{"name":"Fucose","type":"related"},{"name":"dHex","type":"related"}],"termid":"MOD:01246"}


id: PR:Q9Y7T7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX23 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04476","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing ATP-dependent RNA helicase prp28 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.11","secondary_identifiers":["UniProtKB:Q9Y7T7"],"synonyms":[{"name":"Spom972h-DDX23","type":"exact"}],"termid":"PR:Q9Y7T7"}


id: PBO:0038421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APOBEC1 complementation factor","termid":"PBO:0038421"}


id: FYPO:0007582
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of septation initiation network signaling is longer than normal. Signaling may continue after cytokinesis takes place.","definition_xrefs":["PomBase:mah","PomBase:vw","PMID:19736319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septation initiation network signaling","termid":"FYPO:0007569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000298","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of septation initiation network signaling","synonyms":[{"name":"increased duration of SIN signaling","type":"exact"},{"name":"increased duration of septation initiation network signaling during mitotic cell cycle","type":"related"},{"name":"increased duration of septation initiation network signaling during vegetative growth","type":"exact"},{"name":"increased duration of septation initiation network signalling","type":"exact"},{"name":"increased duration of septation initiation signaling","type":"exact"},{"name":"prolonged septation initiation network signaling","type":"exact"}],"termid":"FYPO:0007582"}


id: PBO:0000576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocon gamma subunit Sss1 (predicted)","termid":"PBO:0000576"}


id: GO:0070060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin nucleation process in which actin monomers combine in the absence of any existing actin filaments; elongation of the actin oligomer formed by nucleation leads to the formation of an unbranched filament.","definition_xrefs":["PMID:17477841","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin nucleation","termid":"GO:0045010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"'de novo' actin filament nucleation","synonyms":[{"name":"formin-mediated actin filament nucleation","type":"narrow"},{"name":"unbranched actin filament nucleation","type":"related"}],"termid":"GO:0070060"}


id: GO:0070180
data:
  {"annotated_genes":["SJAG_00315","SJAG_03197","SJAG_03043","SJAG_05248","SJAG_02510","SJAG_03297","SJAG_04847","SJAG_02535","SJAG_01087"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85088,93244,93245,108181,108182,108261,108262,108524,110548,110549,111429,111430,111790,112655,112656],"is_not":false,"summary":null,"term":"GO:0070180"}]},"cv_name":"molecular_function","definition":"Binding to large ribosomal subunit RNA (LSU rRNA), a constituent of the large ribosomal subunit. In S. cerevisiae, this is the 25S rRNA.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA binding","termid":"GO:0019843"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00315":null,"SJAG_01087":null,"SJAG_02510":null,"SJAG_02535":null,"SJAG_03043":null,"SJAG_03197":null,"SJAG_03297":null,"SJAG_04847":null,"SJAG_05248":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"large ribosomal subunit rRNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"25S rRNA binding","type":"exact"},{"name":"LSU rRNA binding","type":"exact"}],"termid":"GO:0070180","terms_by_termid":{"GO:0070180":null}}


id: PR:Q9HGK2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A homologous-pairing protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00387","PRO:DNx","PANTHER:PTHR15938:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homologous-pairing protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.15","secondary_identifiers":["UniProtKB:Q9HGK2"],"synonyms":[{"name":"Spom972h-PSMC3IP","type":"exact"},{"name":"meiotic expression up-regulated protein 13 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HGK2"}


id: GO:0033526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of tetrapyrroles, natural pigments containing four pyrrole rings joined by one-carbon units linking position 2 of one pyrrole ring to position 5 of the next, from other compounds, including L-glutamate.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate metabolic process","termid":"GO:0006536"},{"relation_name":"is_a","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0033013","GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"tetrapyrrole biosynthetic process from glutamate","synonyms":[{"name":"tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"tetrapyrrole formation from glutamate","type":"exact"},{"name":"tetrapyrrole synthesis from glutamate","type":"exact"}],"termid":"GO:0033526"}


id: FYECO:0000107
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which aminopyrimidine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ aminopyrimidine","termid":"FYECO:0000107"}


id: FYPO:0008220
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the G2/M phase of the mitotic cycle in which monomethylation of lysine at position 20 of histone H4 in regions of the genome that are actively transcribed occurs to a greater extent than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4-K20 monomethylation during vegetative growth","termid":"FYPO:0004223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased histone H4-K20 monomethylation in transcribed regions during mitotic G2/M phase","termid":"FYPO:0008220"}


id: GO:0003212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the left cardiac atrium is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac atrium morphogenesis","termid":"GO:0003209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac left atrium morphogenesis","termid":"GO:0003212"}


id: GO:1902522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 4'-epidoxorubicin stimulus.","definition_xrefs":["GOC:TermGenie","GOC:dw","PMID:23648065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to glycoside","termid":"GO:1903416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 4'-epidoxorubicin","synonyms":[{"name":"response to epirubicin","type":"related"}],"termid":"GO:1902522"}


id: FYPO:0001891
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in late meiosis in which the amount of RNA transcribed from middle meiotic genes measured in a cell is higher than normal. Middle meiotic genes are normally transcribed during meiotic nuclear division.","definition_xrefs":["PomBase:al","PomBase:mah","PMID:22558440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during meiotic cell cycle","termid":"FYPO:0005120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased level of middle meiotic gene mRNA during late meiosis","synonyms":[{"name":"increased RNA level of middle meiotic genes during late meiosis","type":"exact"},{"name":"increased level of middle meiosis gene mRNA during late meiosis","type":"exact"},{"name":"increased level of middle meiotic gene RNA during late meiosis","type":"exact"},{"name":"increased level of middle meiotic gene RNA during late meiotic nuclear division","type":"exact"},{"name":"increased level of middle meiotic gene transcripts during late meiosis","type":"exact"}],"termid":"FYPO:0001891"}


id: PBO:0077416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 151A","termid":"PBO:0077416"}


id: GO:0033947
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the alpha-D-mannosyl-(1->6)-beta-D-mannosyl-(1->4)-beta-D-N-acetylglucosaminyl-(1->4)-beta-D-N-acetylglucosaminyl sequence of glycoprotein to alpha-D-mannosyl-(1->6)-D-mannose and beta-D-N-acetylglucosaminyl-(1->4)-beta-D-N-acetylglucosaminyl sequences.","definition_xrefs":["EC:3.2.1.152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-mannosidase activity","termid":"GO:0004567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"mannosylglycoprotein endo-beta-mannosidase activity","secondary_identifiers":["MetaCyc:3.2.1.152-RXN"],"synonyms":[{"name":"endo-beta-mannosidase activity","type":"related"}],"termid":"GO:0033947"}


id: PBO:0083937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Galactose-1-phosphate uridyl transferase; synthesizes glucose-1-phosphate and UDP-galactose from UDP-D-glucose and alpha-D-galactose-1-phosphate in the second step of galactose catabolism; human homolog UGP2 can complement yeast null mutant","termid":"PBO:0083937"}


id: PBO:0063659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase family member 4","termid":"PBO:0063659"}


id: PBO:0088738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3-H4 chaperone, HIR complex subunit Hip3","termid":"PBO:0088738"}


id: PBO:0011963
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA level","termid":"PBO:0011963"}


id: PBO:0049141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamic--pyruvic transaminase 2","termid":"PBO:0049141"}


id: RO:0002587
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_formation_of","termid":"_global:results_in_formation_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_synthesis_of","termid":"RO:0002587"}


id: GO:0051034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of tRNA, transfer ribonucleic acid, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transmembrane transporter activity","termid":"GO:0051033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"tRNA transmembrane transporter activity","termid":"GO:0051034"}


id: PR:O14262
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A haloacid dehalogenase-like hydrolase domain-containing protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01103","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized hydrolase C7D4.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.05","secondary_identifiers":["UniProtKB:O14262"],"synonyms":[{"name":"Spom972h-HDHD3","type":"exact"}],"termid":"PR:O14262"}


id: FYPO:0002972
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ubiquitin ligase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal ubiquitin ligase activity","termid":"FYPO:0001912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"increased ubiquitin ligase activity","synonyms":[{"name":"increased ubiquitin-protein ligase activity","type":"exact"}],"termid":"FYPO:0002972"}


id: PBO:0071981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 10","termid":"PBO:0071981"}


id: PR:P21535
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP synthase subunit a that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05079","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit a (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.07","secondary_identifiers":["UniProtKB:P21535"],"synonyms":[{"name":"F-ATPase protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MT-ATP6","type":"exact"}],"termid":"PR:P21535"}


id: GO:0160112
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structural network of microtubule inner proteins (MIPs) located inside the lumen of the B tubule of the axonemal microtubule doublet that helps stabilize the B tubule.","definition_xrefs":["PMID:37295417","GOC:krc","PMID:29430673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"A axonemal microtubule","termid":"GO:0097649"},{"relation_name":"part_of","term_name":"axonemal microtubule doublet inner sheath","termid":"GO:0160110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0015630"],"is_obsolete":false,"name":"axonemal B tubule inner sheath","termid":"GO:0160112"}


id: PBO:0062295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 6 pseudogene","termid":"PBO:0062295"}


id: PR:O74945
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An elongation factor Tu GTP-binding domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.08c","secondary_identifiers":["UniProtKB:O74945"],"synonyms":[{"name":"EF-2 like GTPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-EFTUD1","type":"exact"},{"name":"elongation factor-like 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74945"}


id: GO:0141174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont inhibits or disrupts anti-inflammatory cytokine signaling in the host organism, either by disruption of production, sequesteration, or destruction of at least one component of the signaling pathway.  Anti-inflammatory cytokines include: interleukin (IL)-1, IL-4, IL-6, IL-10, IL-11, and IL-13. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:32754056","PMID:19168731","PMID:29720526"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host receptor-mediated signal transduction","termid":"GO:0075109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host anti-inflammatory cytokine signaling","synonyms":[{"name":"negative regulation by symbiont of host anti-inflammatory cytokine production","type":"exact"},{"name":"suppression by symbiont of host anti-inflammatory cytokine production","type":"exact"},{"name":"suppression by symbiont of host anti-inflammatory cytokine secretion","type":"related"},{"name":"symbiont-mediated degradation of host anti-inflammatory cytokine","type":"narrow"},{"name":"symbiont-mediated sequestering of host anti-inflammatory cytokine","type":"related"},{"name":"symbiont-mediated suppression of host anti-inflammatory cytokine production","type":"related"}],"termid":"GO:0141174"}


id: PBO:0058889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10526","termid":"PBO:0058889"}


id: PBO:0030888
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_DNA_replication_initiation","termid":"PBO:0030888"}


id: GO:0050380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: di-trans,octa-cis-undecaprenyl diphosphate + H2O = di-trans,octa-cis-undecaprenyl phosphate + H+ + phosphate.","definition_xrefs":["RHEA:28094","PMID:18411271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"undecaprenyl-diphosphatase activity","secondary_identifiers":["KEGG_REACTION:R05627","MetaCyc:UNDECAPRENYL-DIPHOSPHATASE-RXN","EC:3.6.1.27"],"synonyms":[{"name":"C(55)-isoprenyl diphosphatase activity","type":"related"},{"name":"C(55)-isoprenyl pyrophosphatase activity","type":"related"},{"name":"C55-isoprenyl diphosphatase activity","type":"related"},{"name":"C55-isoprenyl pyrophosphatase activity","type":"related"},{"name":"isoprenyl pyrophosphatase activity","type":"related"},{"name":"undecaprenyl-diphosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0050380"}


id: PBO:0045532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deltex E3 ubiquitin ligase 3","termid":"PBO:0045532"}


id: PBO:0061019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein interacting with the FHA domain of MKI67 pseudogene 2","termid":"PBO:0061019"}


id: PBO:0068792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 29, pseudogene","termid":"PBO:0068792"}


id: PBO:0091200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala","termid":"PBO:0091200"}


id: PBO:0086058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that associates with ribosomes; has a putative RNA binding domain; in mammals the corresponding protein, eIF2D, has been shown to possess translation initiation factor activity","termid":"PBO:0086058"}


id: GO:0018865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving acrylonitrile, a colorless, volatile liquid with a pungent odor. Acrylonitrile is used in the production of acrylic fibers, plastics, and synthetic rubbers.","definition_xrefs":["PMID:3830164","PMID:1390687"],"gene_count":0,"genotype_count":0,"name":"obsolete acrylonitrile metabolic process (obsolete GO:0018865)","synonyms":[{"name":"acrylonitrile metabolism","type":"broad"}],"termid":"GO:0018865"}


id: FYPO:0007367
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of fructose 1,6-bisphosphate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular fructose 1,6-bisphosphate level","synonyms":[{"name":"increased cellular D-fructose 1,6-bisphosphate level","type":"exact"},{"name":"increased cellular fructose 1,6-bisphosphate level during mitotic cell cycle","type":"related"},{"name":"increased cellular fructose 1,6-bisphosphate level during vegetative growth","type":"exact"},{"name":"increased fructose 1,6-bisphosphate accumulation","type":"related"}],"termid":"FYPO:0007367"}


id: PBO:0052394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family binding protein","termid":"PBO:0052394"}


id: GO:0047673
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anthranilate + malonyl-CoA = N-malonylanthranilate + CoA.","definition_xrefs":["RHEA:17557","EC:2.3.1.113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-malonyltransferase activity","termid":"GO:0050735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"anthranilate N-malonyltransferase activity","secondary_identifiers":["MetaCyc:ANTHRANILATE-N-MALONYLTRANSFERASE-RXN","KEGG_REACTION:R00989"],"synonyms":[{"name":"malonyl-CoA:anthranilate N-malonyltransferase activity","type":"related"}],"termid":"GO:0047673"}


id: GO:1902878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of BMP signaling pathway involved in spinal cord association neuron specification.","definition_xrefs":["PMID:21730158","GO_REF:0000058","GOC:mr","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of BMP signaling pathway involved in spinal cord association neuron specification (obsolete GO:1902878)","synonyms":[{"name":"regulation of BMP signalling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"regulation of bone morphogenetic protein signaling pathway involved in spinal cord association neuron specification","type":"exact"},{"name":"regulation of bone morphogenetic protein signalling pathway involved in spinal cord association neuron specification","type":"exact"}],"termid":"GO:1902878"}


id: PBO:0055320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2748","termid":"PBO:0055320"}


id: GO:0046106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of thymine, 5-methyluracil, one of the two major pyrimidine bases present (as thymidine) in DNA but not found in RNA other than (as ribothymidine) in transfer RNA, where it is a minor base.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase biosynthetic process","termid":"GO:0019856"},{"relation_name":"is_a","term_name":"thymine metabolic process","termid":"GO:0019859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"thymine biosynthetic process","synonyms":[{"name":"thymine anabolism","type":"exact"},{"name":"thymine biosynthesis","type":"exact"},{"name":"thymine formation","type":"exact"},{"name":"thymine synthesis","type":"exact"}],"termid":"GO:0046106"}


id: PR:Q9UUE1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pyruvate carboxylase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate carboxylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.11c","secondary_identifiers":["UniProtKB:Q9UUE1"],"synonyms":[{"name":"PCB (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC17G9.11c","type":"related"},{"name":"Spom972h-PC","type":"exact"},{"name":"pyruvic carboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUE1"}


id: GO:0035538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a carbohydrate response element (ChoRE) found in the promoters of genes whose expression is regulated in response to carbohydrates, such as the triglyceride synthesis genes.","definition_xrefs":["GOC:BHF","PMID:20001964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0000976","GO:0003677"],"is_obsolete":false,"name":"carbohydrate response element binding","synonyms":[{"name":"ChoRE binding","type":"exact"}],"termid":"GO:0035538"}


id: PBO:0081581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 510","termid":"PBO:0081581"}


id: MOD:01529
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ8plex-113 reporter+balance group.","definition_xrefs":["Unimod:730#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-113 reporter+balance reagent acylated residue","termid":"MOD:01528"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated N-terminal","termid":"MOD:01712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-113 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01529"}


id: GO:0097088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-17F due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv","Wikipedia:Interleukin_17"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-17 production","termid":"GO:0032620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-17F production","synonyms":[{"name":"IL-17F production","type":"exact"}],"termid":"GO:0097088"}


id: FYPO:0005378
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which spindle pole body organization is normal (i.e. indistinguishable from wild type). Spindle pole body organization is a process that results in the assembly, arrangement of constituent parts, or disassembly of the spindle pole body (SPB).","definition_xrefs":["GO:0051300","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal spindle pole body organization","synonyms":[{"name":"normal SPB organization","type":"exact"},{"name":"normal spindle pole body organisation","type":"exact"}],"termid":"FYPO:0005378"}


id: PR:Q10366
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphatidylinositol 4-kinase beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02103","PANTHER:PTHR10048:SF22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol 4-kinase pik1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.16c","secondary_identifiers":["UniProtKB:Q10366"],"synonyms":[{"name":"PI4-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PtdIns-4-kinase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PI4KB","type":"exact"}],"termid":"PR:Q10366"}


id: PBO:0084754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial matrix GTPase; associates with mitochondrial ribosomes; important for translation under temperature and nutrient stress; may have a role in translational fidelity; similar to bacterial LepA elongation factor","termid":"PBO:0084754"}


id: PBO:0091494
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hal3 N-term functionally complements S. cerevisiae HAL3","termid":"PBO:0091494"}


id: PBO:0040457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+/K+ transporting non-gastric alpha2 subunit","termid":"PBO:0040457"}


id: GO:0050733
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an RS domain of a protein; RS domains are usually highly phosphorylated and characterized by the presence of arginine (R)/serine (S) dipeptides. The RS domain promotes protein-protein interactions and directs subcellular localization and, in certain situations, nucleocytoplasmic shuttling of individual SR proteins. They also play a role in splicing.","definition_xrefs":["PMID:11684676","PMID:12215544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"RS domain binding","termid":"GO:0050733"}


id: GO:0031953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or decreases the rate of the phosphorylation by a protein of one or more of its own residues.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein phosphorylation","termid":"GO:0001933"},{"relation_name":"is_a","term_name":"regulation of protein autophosphorylation","termid":"GO:0031952"},{"relation_name":"negatively_regulates","term_name":"protein autophosphorylation","termid":"GO:0046777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein autophosphorylation","synonyms":[{"name":"down regulation of protein amino acid autophosphorylation","type":"exact"},{"name":"down-regulation of protein amino acid autophosphorylation","type":"exact"},{"name":"downregulation of protein amino acid autophosphorylation","type":"exact"},{"name":"inhibition of protein amino acid autophosphorylation","type":"narrow"},{"name":"negative regulation of protein amino acid autophosphorylation","type":"exact"}],"termid":"GO:0031953"}


id: GO:0035290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Partitioning of the blastoderm embryo into trunk segmental units. In Drosophila, the trunk segments include thoracic segments and abdominal segments A1 to A8.","definition_xrefs":["PMID:1360402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"segmentation","termid":"GO:0035282"},{"relation_name":"part_of","term_name":"blastoderm segmentation","termid":"GO:0007350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trunk segmentation","termid":"GO:0035290"}


id: PR:O74546
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- omh3 gene.","definition_xrefs":["UniProtKB:O74546","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha-1,2-mannosyltransferase homolog 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.07","synonyms":[{"name":"Spom972h-omh3","type":"exact"}],"termid":"PR:O74546"}


id: PATO:0001270
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of cyan colour and low saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyan","termid":"PATO:0000319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desaturated cyan","synonyms":[{"name":"pale cyan","type":"exact"}],"termid":"PATO:0001270"}


id: PBO:0027027
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_iron_homeostasis_gene_mRNA_during_vegetative_growth","termid":"PBO:0027027"}


id: PBO:0000683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear HMG-like acidic protein Mak16 (predicted)","termid":"PBO:0000683"}


id: PBO:0027392
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phospholipid:diacylglycerol_acyltransferase_activity","termid":"PBO:0027392"}


id: PBO:0086943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras-type GTPase; required for bud site selection during both axial and bipolar budding, for morphological changes in response to mating pheromone, and for efficient cell fusion; recruits Cdc24p to the incipient bud site, activating its guanyl-nucleotide exchange factor activity and the Rho-like GTPase, Cdc42p; localizes to the plasma membrane, the incipient bud site, polarized growth sites, the cell division site and the vacuole membrane; Ras superfamily member similar to mammalian Rap GTPases","termid":"PBO:0086943"}


id: PBO:0067912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 214","termid":"PBO:0067912"}


id: GO:0050283
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine O-sulfate + H2O = pyruvate + NH3 + sulfate.","definition_xrefs":["MetaCyc:SERINE-SULFATE-AMMONIA-LYASE-RXN","EC:4.3.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"serine-sulfate ammonia-lyase activity","secondary_identifiers":["RHEA:15605"],"synonyms":[{"name":"(L-SOS)lyase activity","type":"related"},{"name":"L-serine-O-sulfate ammonia-lyase (pyruvate-forming)","type":"related"},{"name":"serine-sulphate ammonia-lyase activity","type":"exact"}],"termid":"GO:0050283"}


id: PBO:0091289
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human EIF3H","termid":"PBO:0091289"}


id: PBO:0069101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 348, pseudogene","termid":"PBO:0069101"}


id: PBO:0062855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otolin 1","termid":"PBO:0062855"}


id: GO:0008845
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["PMID:12713806"],"gene_count":0,"genotype_count":0,"name":"obsolete endonuclease VIII activity (obsolete GO:0008845)","synonyms":[{"name":"endonuclease VIII activity","type":"exact"}],"termid":"GO:0008845"}


id: SO:0001426
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A read produced by the polymerase based sequence by synthesis method.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymerase_synthesis_read","synonyms":[{"name":"polymerase synthesis read","type":"related"}],"termid":"SO:0001426"}


id: GO:0009175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine ribonucleoside monophosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside monophosphate catabolic process","termid":"GO:0009131"},{"relation_name":"is_a","term_name":"ribonucleoside monophosphate catabolic process","termid":"GO:0009158"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate metabolic process","termid":"GO:0009173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyrimidine ribonucleoside monophosphate catabolic process","synonyms":[{"name":"pyrimidine ribonucleoside monophosphate breakdown","type":"exact"},{"name":"pyrimidine ribonucleoside monophosphate catabolism","type":"exact"},{"name":"pyrimidine ribonucleoside monophosphate degradation","type":"exact"}],"termid":"GO:0009175"}


id: PBO:0080577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR4 pseudogene 1","termid":"PBO:0080577"}


id: GO:0022879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + trehalose(out) = protein histidine + trehalose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"trehalose transmembrane transporter activity","termid":"GO:0015574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0016740","GO:0022857","GO:0005215","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-trehalose phosphotransferase system transporter activity","synonyms":[{"name":"trehalose PTS transporter activity","type":"exact"}],"termid":"GO:0022879"}


id: PBO:0069349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 609, pseudogene","termid":"PBO:0069349"}


id: PR:O94707
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rxt3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulatory protein rxt3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.07","synonyms":[{"name":"Spom972h-rxt3","type":"exact"}],"termid":"PR:O94707"}


id: PBO:0082866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core Sm protein Sm F; part of heteroheptameric complex (with Smb1p, Smd1p, Smd2p, Smd3p, Sme1p, and Smx2p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; homolog of human Sm F","termid":"PBO:0082866"}


id: PBO:0069722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1003, pseudogene","termid":"PBO:0069722"}


id: PR:Q09904
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup124 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09904"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup124 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.04c","synonyms":[{"name":"Spom972h-nup124","type":"exact"},{"name":"nuclear pore protein nup124 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09904"}


id: GO:0010068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the primary meristem or meristematic tissue that gives rise to the epidermis.","definition_xrefs":["ISBN:0471245208","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary meristem tissue development","termid":"GO:0010065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protoderm histogenesis","termid":"GO:0010068"}


id: GO:0032958
data:
  {"annotated_genes":["SJAG_00321","SJAG_00244","SJAG_01148","SJAG_02321","SJAG_03409"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89432,94853,111112,113083,114886],"is_not":false,"summary":null,"term":"GO:0032958"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an inositol phosphate, 1,2,3,4,5,6-cyclohexanehexol, with one or more phosphate groups attached.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphate metabolic process","termid":"GO:0043647"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00321":null,"SJAG_01148":null,"SJAG_02321":null,"SJAG_03409":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"inositol phosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"inositol phosphate anabolism","type":"exact"},{"name":"inositol phosphate biosynthesis","type":"exact"},{"name":"inositol phosphate formation","type":"exact"},{"name":"inositol phosphate synthesis","type":"exact"},{"name":"myo-inositol phosphate biosynthetic process","type":"narrow"}],"termid":"GO:0032958","terms_by_termid":{"GO:0032958":null}}


id: FYPO:0004254
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to ultraviolet light (UV) is abnormal. Normally, cell cycle progression is slowed or arrested transiently following exposure to UV. The most common abnormality is for the cell cycle to progress as in the absence of UV exposure.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to UV","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to UV","type":"exact"},{"name":"abnormal cell cycle regulation during cellular response to UV during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle delay following UV exposure","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to UV during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to ultraviolet light","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to UV","type":"exact"}],"termid":"FYPO:0004254"}


id: GO:0033106
data:
  {"annotated_genes":["SJAG_03953","SJAG_01415","SJAG_03690","SJAG_02168"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86789,91791,95161,113587],"is_not":false,"summary":null,"term":"GO:0033106"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the compartments that make up the cis-Golgi network.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"cis-Golgi network","termid":"GO:0005801"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01415":null,"SJAG_02168":null,"SJAG_03690":null,"SJAG_03953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005794","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cis-Golgi network membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi cis face membrane","type":"related"},{"name":"cis Golgi network membrane","type":"exact"}],"termid":"GO:0033106","terms_by_termid":{"GO:0033106":null}}


id: GO:0018828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the elimination of HCl from a chloro- or bromopropanol, yielding an epoxypropane.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete halohydrin hydrogen-halide-lyase A activity (obsolete GO:0018828)","termid":"GO:0018828"}


id: FYPO:0004530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial translation does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial translation","termid":"FYPO:0004528"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished mitochondrial translation","synonyms":[{"name":"abolished mitochondrial protein biosynthesis","type":"exact"},{"name":"abolished mitochondrial protein synthesis","type":"exact"},{"name":"abolished mitochondrial translation during mitotic cell cycle","type":"related"},{"name":"abolished mitochondrial translation during vegetative growth","type":"exact"},{"name":"mitochondrial translation abolished","type":"exact"}],"termid":"FYPO:0004530"}


id: PBO:0044971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 8","termid":"PBO:0044971"}


id: GO:0002515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process contributing to anergy in B cells, a state of functional inactivation which is part of B cell tolerance induction.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte anergy","termid":"GO:0002249"},{"relation_name":"is_a","term_name":"B cell tolerance induction","termid":"GO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell anergy","synonyms":[{"name":"B lymphocyte anergy","type":"exact"},{"name":"B-cell anergy","type":"exact"},{"name":"B-lymphocyte anergy","type":"exact"}],"termid":"GO:0002515"}


id: GO:0010055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an atrichoblast, a root epidermal cell that will not give rise to a root hair.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"root epidermal cell differentiation","termid":"GO:0010053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrichoblast differentiation","termid":"GO:0010055"}


id: PBO:0026671
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_microtubule_plus-end_directed_mitotic_chromosome_migration","termid":"PBO:0026671"}


id: PBO:0080427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 11","termid":"PBO:0080427"}


id: PBO:0054927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2341","termid":"PBO:0054927"}


id: PBO:0077213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 9 superfamily member 4","termid":"PBO:0077213"}


id: GO:0098751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a bone cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"bone development","termid":"GO:0060348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone cell development","termid":"GO:0098751"}


id: PBO:0038314
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_initial_curator_email","termid":"PBO:0038314"}


id: PBO:0066678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA 5'-phosphate and 3'-OH ligase 1","termid":"PBO:0066678"}


id: GO:0004709
data:
  {"annotated_genes":["SJAG_01718","SJAG_04777","SJAG_03753","SJAG_03384"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83618,88312,96961,102325],"is_not":false,"summary":null,"term":"GO:0004709"}]},"cv_name":"molecular_function","definition":"Catalysis of the phosphorylation and activation of a MAP kinase kinase; each MAP kinase kinase can be phosphorylated by any of several MAP kinase kinase kinases.","definition_xrefs":["PMID:9561267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01718":null,"SJAG_03384":null,"SJAG_03753":null,"SJAG_04777":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0004672","GO:0003674","GO:0140096","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"MAP kinase kinase kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-727819","EC:2.7.11.25","Reactome:R-HSA-392530","Reactome:R-HSA-2730887","Reactome:R-HSA-933530","Reactome:R-HSA-451649","GO:0004710","MetaCyc:2.7.11.25-RXN"],"synonyms":[{"name":"ATP:protein phosphotransferase (MAPKKKK-activated) activity","type":"related"},{"name":"MAP3K","type":"related"},{"name":"MAPK/ERK kinase kinase activity","type":"exact"},{"name":"MAPKKK activity","type":"related"},{"name":"MEK kinase activity","type":"related"},{"name":"MEKK","type":"related"},{"name":"MEKK activity","type":"exact"},{"name":"MEKK1","type":"related"},{"name":"MEKK2","type":"related"},{"name":"MEKK3","type":"related"},{"name":"MLK-like mitogen-activated protein triple kinase activity","type":"narrow"},{"name":"MLTK","type":"related"},{"name":"MLTKa","type":"related"},{"name":"MLTKb","type":"related"},{"name":"Mil/Raf","type":"related"},{"name":"REKS","type":"related"},{"name":"STK28","type":"related"},{"name":"cMos","type":"related"},{"name":"cRaf","type":"related"},{"name":"mitogen-activated protein kinase kinase kinase activity","type":"related"}],"termid":"GO:0004709","terms_by_termid":{"GO:0004709":null}}


id: PBO:0041785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcyphosine like","termid":"PBO:0041785"}


id: GO:0050035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-sorbose + O2 = 5-dehydro-D-fructose + H2O2.","definition_xrefs":["RHEA:17853","EC:1.1.3.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-sorbose oxidase activity","secondary_identifiers":["MetaCyc:L-SORBOSE-OXIDASE-RXN","KEGG_REACTION:R01695"],"synonyms":[{"name":"L-sorbose:oxygen 5-oxidoreductase activity","type":"related"}],"termid":"GO:0050035"}


id: PBO:0077286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM30A divergent transcript","termid":"PBO:0077286"}


id: PBO:0070152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 66 pseudogene","termid":"PBO:0070152"}


id: MOD:00072
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-methylglycine.","definition_xrefs":["ChEBI:15611","PubMed:1593629","RESID:AA0063","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 71.037114 Da","termid":"MOD:00570"},{"relation_name":"is_a","term_name":"methylated glycine","termid":"MOD:00714"},{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methylglycine","synonyms":[{"name":"L-sarcosine","type":"exact"},{"name":"MOD_RES N-methylglycine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N-methylated glycine","type":"exact"},{"name":"N-methylglycine","type":"exact"},{"name":"NMe1Gly","type":"exact"},{"name":"Sar","type":"exact"},{"name":"Sarcosine","type":"exact"},{"name":"Sarcosyl","type":"exact"},{"name":"methylaminoacetic acid","type":"exact"},{"name":"methylaminoethanoic acid","type":"exact"}],"termid":"MOD:00072"}


id: PBO:0004662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase epsilon subunit (predicted)","termid":"PBO:0004662"}


id: PBO:0058071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4290","termid":"PBO:0058071"}


id: GO:2001004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of pectin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of macromolecule metabolic process","termid":"GO:0010605"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"regulation of pectin catabolic process","termid":"GO:2001003"},{"relation_name":"negatively_regulates","term_name":"pectin catabolic process","termid":"GO:0045490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of pectin catabolic process","synonyms":[{"name":"negative regulation of pectin breakdown","type":"exact"},{"name":"negative regulation of pectin catabolism","type":"exact"},{"name":"negative regulation of pectin degradation","type":"exact"}],"termid":"GO:2001004"}


id: PBO:0039220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member E2","termid":"PBO:0039220"}


id: FYPO:0004055
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during cellular response to osmotic stress","termid":"FYPO:0006743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to nucleus during cellular response to salt stress","synonyms":[{"name":"decreased protein localisation to nucleus during cellular response to salt stress","type":"exact"},{"name":"decreased protein localization to nucleus during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to nucleus during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"decreased protein localization to nucleus during salt stress","type":"exact"},{"name":"reduced protein localization to nucleus during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0004055"}


id: PBO:0062107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 5","termid":"PBO:0062107"}


id: PBO:0091511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane P-type proton exporting ATPase, P3-type Pma1","termid":"PBO:0091511"}


id: GO:0052368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of cellular components of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete disruption by organism of cellular component in other organism involved in symbiotic interaction (obsolete GO:0052368)","synonyms":[{"name":"catabolism of cellular component in other organism","type":"exact"},{"name":"catabolism of structural constituent in other organism","type":"exact"},{"name":"degradation of cellular component in other organism","type":"exact"},{"name":"disassembly by organism of cellular component in other organism during symbiotic interaction","type":"related"},{"name":"disassembly by organism of cellular component in other organism involved in symbiotic interaction","type":"related"}],"termid":"GO:0052368"}


id: GO:0090592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis of DNA that is a part of the process of duplicating one or more molecules of DNA.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA biosynthetic process","termid":"GO:0071897"},{"relation_name":"part_of","term_name":"DNA replication","termid":"GO:0006260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"DNA synthesis involved in DNA replication","termid":"GO:0090592"}


id: PBO:0001564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO-targeted ubiquitin-protein ligase subunit Rfp1","termid":"PBO:0001564"}


id: PBO:0065309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 29, pseudogene","termid":"PBO:0065309"}


id: PBO:0068546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 152, pseudogene","termid":"PBO:0068546"}


id: FYPO:0005936
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of occurrence of intragenic meiotic recombination is normal (i.e. indistinguishable from wild type). Intragenic meiotic recombination can result in gene conversion events.","definition_xrefs":["PomBase:mah","PMID:19470480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal intragenic meiotic recombination frequency","synonyms":[{"name":"normal meiotic intragenic recombination frequency","type":"exact"}],"termid":"FYPO:0005936"}


id: GO:0046900
data:
  {"annotated_genes":["SJAG_03224","SJAG_00529"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100803,88989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046901"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetrahydrofolylpolyglutamate, a folate derivative comprising tetrahydrofolate attached to a chain of glutamate residues.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound metabolic process","termid":"GO:0006760"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00529":null,"SJAG_03224":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tetrahydrofolylpolyglutamate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tetrahydrofolyl-[Glu](n) metabolic process","type":"exact"},{"name":"tetrahydrofolyl-[Glu](n) metabolism","type":"exact"},{"name":"tetrahydrofolylpolyglutamate metabolism","type":"exact"}],"termid":"GO:0046900","terms_by_termid":{"GO:0046901":null}}


id: PBO:0113019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Benzil oxidoreductase with preference for NADPH; localizes to the cytoplasm; sequence similarity with short-chain dehydrogenase/reductases; putative paralog of IRC24","termid":"PBO:0113019"}


id: GO:0004630
data:
  {"annotated_genes":["SJAG_01519"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91995],"is_not":false,"summary":null,"term":"GO:0004630"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphatidylcholine + H2O = choline + a phosphatidate.","definition_xrefs":["EC:3.1.4.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activity","termid":"GO:0004620"},{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01519":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"phospholipase D activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PHOSCHOL-RXN","Reactome:R-HSA-1483182","Reactome:R-HSA-1483142","Reactome:R-HSA-2029471","RHEA:14445"],"synonyms":[{"name":"choline phosphatase activity","type":"related"},{"name":"lecithinase D activity","type":"related"},{"name":"lipophosphodiesterase II activity","type":"related"},{"name":"phosphatidylcholine phosphatidohydrolase activity","type":"related"}],"termid":"GO:0004630","terms_by_termid":{"GO:0004630":null}}


id: PATO:0002095
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A disposition inhering in a tumour to progress or fail to progress during it's life time.","definition_xrefs":["PATOC:GVG"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0002095 neoplasm disposition (obsolete PATO:0002095)","termid":"PATO:0002095"}


id: PBO:0055002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2417","termid":"PBO:0055002"}


id: PBO:0071916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3 pseudogene 1","termid":"PBO:0071916"}


id: PR:Q9USW6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dolichol phosphate-mannose biosynthesis regulatory protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol phosphate-mannose biosynthesis regulatory protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21B10.11","secondary_identifiers":["UniProtKB:Q9USW6"],"synonyms":[{"name":"Spom972h-DPM2","type":"exact"}],"termid":"PR:Q9USW6"}


id: GO:1901911
data:
  {"annotated_genes":["SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84775],"is_not":false,"summary":null,"term":"GO:1901911"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of adenosine 5'-(hexahydrogen pentaphosphate).","definition_xrefs":["GOC:TermGenie","PMID:10090752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"adenosine 5'-(hexahydrogen pentaphosphate) metabolic process","termid":"GO:1901910"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"adenosine 5'-(hexahydrogen pentaphosphate) catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenosine 5'-(hexahydrogen pentaphosphate) breakdown","type":"exact"},{"name":"adenosine 5'-(hexahydrogen pentaphosphate) catabolism","type":"exact"},{"name":"adenosine 5'-(hexahydrogen pentaphosphate) degradation","type":"exact"}],"termid":"GO:1901911","terms_by_termid":{"GO:1901911":null}}


id: GO:0072436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about whether DNA replication is complete is received and converted into a molecular signal, contributing to a DNA replication checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in DNA replication checkpoint (obsolete GO:0072436)","synonyms":[{"name":"DNA replication checkpoint sensor mechanism","type":"related"},{"name":"DNA replication checkpoint sensor process","type":"related"},{"name":"sensing involved in DNA replication checkpoint","type":"related"}],"termid":"GO:0072436"}


id: PBO:0067393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 498, pseudogene","termid":"PBO:0067393"}


id: GO:1900882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 17-methylnonadec-1-ene.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular alkene metabolic process","termid":"GO:0043449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"17-methylnonadec-1-ene metabolic process","synonyms":[{"name":"17-methylnonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900882"}


id: PATO:0002289
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A hairy quality inhering in a bearer by virtue of the bearer's being covered with setae.","definition_xrefs":["ISBN:0913424137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hairy","termid":"PATO:0000454"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"setose","termid":"PATO:0002289"}


id: GO:0060143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the formation of a syncytium, a mass of cytoplasm containing several nuclei enclosed within a single plasma membrane, by the fusion of the plasma membranes of two or more individual cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of syncytium formation by plasma membrane fusion","termid":"GO:0060142"},{"relation_name":"positively_regulates","term_name":"syncytium formation by plasma membrane fusion","termid":"GO:0000768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of syncytium formation by plasma membrane fusion","termid":"GO:0060143"}


id: GO:0070563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the vitamin D receptor signaling pathway activity.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vitamin D receptor signaling pathway","termid":"GO:0070562"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"vitamin D receptor signaling pathway","termid":"GO:0070561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of vitamin D receptor signaling pathway","synonyms":[{"name":"down regulation of vitamin D receptor signaling pathway","type":"exact"},{"name":"down-regulation of vitamin D receptor signaling pathway","type":"exact"},{"name":"downregulation of vitamin D receptor signaling pathway","type":"exact"},{"name":"inhibition of vitamin D receptor signaling pathway","type":"narrow"},{"name":"negative regulation of VDR signaling pathway","type":"exact"},{"name":"negative regulation of VDR signalling pathway","type":"exact"},{"name":"negative regulation vitamin D receptor signalling pathway","type":"exact"}],"termid":"GO:0070563"}


id: PBO:0068212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 519","termid":"PBO:0068212"}


id: GO:1903913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of fusion of virus membrane with host plasma membrane.","definition_xrefs":["GOC:TermGenie","PMID:23575248","GO_REF:0000058","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral entry into host cell","termid":"GO:0046596"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"fusion of virus membrane with host plasma membrane","termid":"GO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of fusion of virus membrane with host plasma membrane","synonyms":[{"name":"regulation of viral entry into host cell via membrane fusion with the plasma membrane","type":"related"},{"name":"regulation of viral envelope fusion","type":"broad"},{"name":"regulation of viral envelope fusion with host cell membrane","type":"exact"},{"name":"regulation of viral envelope fusion with host membrane","type":"exact"},{"name":"regulation of viral envelope fusion with host plasma membrane","type":"exact"},{"name":"regulation of viral penetration via membrane fusion","type":"exact"},{"name":"regulation of viral-cell fusion molecule activity","type":"related"}],"termid":"GO:1903913"}


id: GO:0047983
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-alanine + L-gamma-glutamyl-L-cysteine + ATP = gamma-L-glutamyl-L-cysteinyl-beta-alanine + ADP + 2 H+ + phosphate.","definition_xrefs":["EC:6.3.2.23","RHEA:17993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"homoglutathione synthase activity","secondary_identifiers":["MetaCyc:HOMOGLUTATHIONE-SYNTHASE-RXN","KEGG_REACTION:R02741"],"synonyms":[{"name":"beta-alanine specific hGSH synthetase activity","type":"related"},{"name":"gamma-L-glutamyl-L-cysteine:beta-alanine ligase (ADP-forming)","type":"related"},{"name":"homoglutathione synthetase activity","type":"related"}],"termid":"GO:0047983"}


id: PBO:0018112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transmembrane transporter Ght1","termid":"PBO:0018112"}


id: PATO:0002045
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branched quality inhering in a bearer by virtue of the bearer's having smaller branches arising from larger branches. Resembling a tree in branching structure.","definition_xrefs":["PATOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dendritic","synonyms":[{"name":"dendriform","type":"exact"},{"name":"dendroid","type":"exact"},{"name":"dendroidal","type":"exact"}],"termid":"PATO:0002045"}


id: PR:O43045
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An iron-sulfur cluster assembly 2, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10072:SF26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur assembly protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.17","secondary_identifiers":["UniProtKB:O43045"],"synonyms":[{"name":"SPBC3B9.17","type":"related"},{"name":"Spom972h-ISCA2","type":"exact"}],"termid":"PR:O43045"}


id: PATO:0002063
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape inhering in a bearer by virtue of the bearer's being elongated and cylindrical.","definition_xrefs":["PATOC:me"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"columnar","termid":"PATO:0002063"}


id: GO:0052706
data:
  {"annotated_genes":["SJAG_00832"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99696],"is_not":false,"summary":null,"term":"GO:0052706"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-histidine + 3 S-adenosyl-L-methionine <=> 3 H(+) + hercynine + 3 S-adenosyl-L-homocysteine. This reaction is the addition of three methyl groups to L-histidine to form N-alpha,N-alpha,N-alpha-trimethyl-L-histidine (also known as hercynine).","definition_xrefs":["RHEA:38471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00832":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"L-histidine N(alpha)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-14431","EC:2.1.1.44","KEGG_REACTION:R01169"],"synonyms":[{"name":"S-adenosyl-L-methionine:L-histidine Nalpha-methyltransferase activity","type":"exact"},{"name":"S-adenosyl-L-methionine:L-histidine alpha-N-methyltransferase activity","type":"exact"},{"name":"histidine N-methyltransferase activity","type":"exact"},{"name":"histidine methyltransferase activity","type":"exact"},{"name":"histidine-alpha-N-methyltransferase activity","type":"exact"}],"termid":"GO:0052706","terms_by_termid":{"GO:0052706":null}}


id: GO:0080133
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the conversion of an alkane to a secondary alcohol.","definition_xrefs":["PMID:17905869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"midchain alkane hydroxylase activity","termid":"GO:0080133"}


id: PBO:0079669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 V2","termid":"PBO:0079669"}


id: PATO:0000723
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000723 high yield (obsolete PATO:0000723)","termid":"PATO:0000723"}


id: PBO:0064391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 13","termid":"PBO:0064391"}


id: GO:0016863
data:
  {"annotated_genes":["SJAG_04307","SJAG_03598"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000247"},{"annotations":[97940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004452"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which the hydrogen donor and acceptor are the same molecule, one or more carbon-carbon double bonds in the molecule are rearranged, and no oxidized product appears.","definition_xrefs":["GOC:mah","EC:5.3.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03598":null,"SJAG_04307":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"intramolecular oxidoreductase activity, transposing C=C bonds","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"intramolecular isomerase activity, transposing C=C bonds","type":"exact"}],"termid":"GO:0016863","terms_by_termid":{"GO:0000247":null,"GO:0004452":null}}


id: PBO:0044735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 18 pseudogene 3","termid":"PBO:0044735"}


id: GO:0060828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the Wnt signaling pathway through beta-catenin, the series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Wnt signaling pathway","termid":"GO:0030111"},{"relation_name":"regulates","term_name":"canonical Wnt signaling pathway","termid":"GO:0060070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of canonical Wnt signaling pathway","secondary_identifiers":["GO:0035412","GO:0035411"],"synonyms":[{"name":"catenin import into nucleus","type":"narrow"},{"name":"regulation of Wnt receptor signaling pathway through beta-catenin","type":"exact"},{"name":"regulation of canonical Wnt receptor signaling pathway","type":"exact"},{"name":"regulation of canonical Wnt receptor signalling pathway","type":"exact"},{"name":"regulation of canonical Wnt-activated signaling pathway","type":"exact"},{"name":"regulation of catenin import into nucleus","type":"narrow"},{"name":"regulation of catenin protein nuclear translocation","type":"narrow"}],"termid":"GO:0060828"}


id: PBO:0027824
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_protein_localization_to_mitotic_spindle","termid":"PBO:0027824"}


id: GO:0016852
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sirohydrochlorin + Co2+ = cobalt-sirohydrochlorin + 2 H+.","definition_xrefs":["RHEA:15893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"sirohydrochlorin cobaltochelatase activity","secondary_identifiers":["MetaCyc:4.99.1.3-RXN","EC:4.99.1.3"],"synonyms":[{"name":"anaerobic cobalt chelatase activity","type":"exact"},{"name":"cobalt-sirohydrochlorin cobalt-lyase (sirohydrochlorin-forming)","type":"related"},{"name":"cobaltochelatase","type":"exact"},{"name":"sirohydrochlorin cobalt-lyase activity","type":"related"}],"termid":"GO:0016852"}


id: PBO:0087124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA 5'-triphosphatase involved in mRNA 5' capping; subunit of mRNA capping enzyme, which is a heterotetramer composed of a Cet1p homodimer and two molecules of guanylyltransferase Ceg1p; Cet1p also has a role in regulation of RNAPII pausing at promoter-proximal sites; interaction between Cet1p and Ceg1p is required for Ceg1p nuclear import; mammalian enzyme is single bifunctional polypeptide; human homolog RNGTT can complement yeast cet1 null mutant","termid":"PBO:0087124"}


id: PATO:0000950
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color between white and black colors.","direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grey","synonyms":[{"name":"plumbeous","type":"related"}],"termid":"PATO:0000950"}


id: SO:0000095
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A plastid gene from leucoplast sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"leucoplast_sequence","termid":"SO:0000747"},{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucoplast_gene","synonyms":[{"name":"leucoplast gene","type":"exact"}],"termid":"SO:0000095"}


id: PBO:0070790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 20","termid":"PBO:0070790"}


id: PBO:0070878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 9","termid":"PBO:0070878"}


id: PBO:0063672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 3 pseudogene 1","termid":"PBO:0063672"}


id: PR:O59745
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrl1 gene.","definition_xrefs":["UniProtKB:O59745","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose 6-phosphate receptor-like protein C530.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.09c","synonyms":[{"name":"Spom972h-mrl1","type":"exact"}],"termid":"PR:O59745"}


id: GO:0048310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The partitioning of nuclei between daughter cells at cell division.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleus inheritance (obsolete GO:0048310)","synonyms":[{"name":"cell nucleus inheritance","type":"exact"}],"termid":"GO:0048310"}


id: PBO:0051971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interacts with SUPT6H, CTD assembly factor 1","termid":"PBO:0051971"}


id: GO:0050429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphatidylcholine + H2O = 1,2-diacylglycerol + choline phosphate. This reaction requires Ca2+.","definition_xrefs":["PMID:25769297","PMID:9426125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C activity","termid":"GO:0004629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"calcium-dependent phospholipase C activity","termid":"GO:0050429"}


id: GO:0033443
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AAA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"AAA codon-amino acid adaptor activity","synonyms":[{"name":"lysine tRNA","type":"related"}],"termid":"GO:0033443"}


id: FYPO:0003820
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains fewer mitochondria than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"mitochondria present in decreased numbers during vegetative growth","synonyms":[{"name":"decreased number of mitochondria during vegetative growth","type":"exact"},{"name":"fewer mitochondria during vegetative growth","type":"exact"},{"name":"mitochondria present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"mitochondria present in reduced numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0003820"}


id: PBO:0039958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 2 binding protein pseudogene 1","termid":"PBO:0039958"}


id: GO:0043544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lipoamide, the functional form of lipoic acid in which the carboxyl group is attached to protein by an amide linkage to a lysine amino group.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"lipoamide binding","termid":"GO:0043544"}


id: GO:1902759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving Mo(VI)-molybdopterin cytosine dinucleotide.","definition_xrefs":["GO_REF:0000068","GOC:dph","GOC:TermGenie","PMID:23201473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"},{"relation_name":"is_a","term_name":"Mo-molybdopterin cofactor metabolic process","termid":"GO:0019720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"Mo(VI)-molybdopterin cytosine dinucleotide metabolic process","synonyms":[{"name":"Mo(VI)-molybdopterin cytosine dinucleotide metabolism","type":"exact"}],"termid":"GO:1902759"}


id: GO:0030241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins to form the myosin-based thick filaments of myofibrils in skeletal muscle.","definition_xrefs":["GOC:mtg_muscle","GOC:ef","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striated muscle myosin thick filament assembly","termid":"GO:0071688"},{"relation_name":"part_of","term_name":"skeletal myofibril assembly","termid":"GO:0014866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"skeletal muscle myosin thick filament assembly","termid":"GO:0030241"}


id: PBO:0076815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENM2 antisense RNA 2","termid":"PBO:0076815"}


id: PBO:0012293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome segregation impaired protein 1","termid":"PBO:0012293"}


id: PBO:0087019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribose-5-phosphate ketol-isomerase; catalyzes the interconversion of ribose 5-phosphate and ribulose 5-phosphate in the pentose phosphate pathway; participates in pyridoxine biosynthesis","termid":"PBO:0087019"}


id: GO:0042217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1-aminocyclopropane-1-carboxylate, a natural product found in plant tissues. It is a key intermediate in the biosynthesis of ethylene (ethene), a fruit-ripening hormone in plants.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1-aminocyclopropane-1-carboxylate metabolic process","termid":"GO:0018871"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid catabolic process","termid":"GO:0170044"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"1-aminocyclopropane-1-carboxylate catabolic process","synonyms":[{"name":"1-aminocyclopropane-1-carboxylate breakdown","type":"exact"},{"name":"1-aminocyclopropane-1-carboxylate catabolism","type":"exact"},{"name":"1-aminocyclopropane-1-carboxylate degradation","type":"exact"}],"termid":"GO:0042217"}


id: GO:0044379
data:
  {"annotated_genes":["SJAG_02228"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103216],"is_not":false,"summary":null,"term":"GO:0044379"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, an actin cortical patch.","definition_xrefs":["PMID:21620704","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell cortex","termid":"GO:0072697"},{"relation_name":"is_a","term_name":"protein localization to actin cytoskeleton","termid":"GO:1903119"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02228":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to actin cortical patch","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to actin cortical patch","type":"exact"}],"termid":"GO:0044379","terms_by_termid":{"GO:0044379":null}}


id: PBO:0082167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adhesion subunit of a-agglutinin of a-cells; C-terminal sequence acts as a ligand for alpha-agglutinin (Sag1p) during agglutination, modified with O-linked oligomannosyl chains, linked to anchorage subunit Aga1p via two disulfide bonds","termid":"PBO:0082167"}


id: PBO:0050962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon lambda 4 (gene/pseudogene)","termid":"PBO:0050962"}


id: PBO:0058341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4714","termid":"PBO:0058341"}


id: PBO:0056807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 4A","termid":"PBO:0056807"}


id: PBO:0055928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A16, pseudogene","termid":"PBO:0055928"}


id: GO:0005768
data:
  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vacuole to which materials ingested by endocytosis are delivered.","definition_xrefs":["ISBN:0198506732","PMID:19696797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"},{"relation_name":"part_of","term_name":"endomembrane 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id: GO:0060026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which an epithelium narrows along one axis and lengthens in a perpendicular axis.","definition_xrefs":["GOC:dph","PMID:12062082","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"convergent extension","secondary_identifiers":["Wikipedia:Convergent_extension"],"termid":"GO:0060026"}


id: GO:0001978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates blood pressure by sensing the amount of stretch occurring in large arteries and responding to the input via central nervous system control.","definition_xrefs":["GOC:dph","GOC:tb","ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by baroreceptor feedback","termid":"GO:0003025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by carotid sinus baroreceptor feedback","synonyms":[{"name":"baroreceptor feedback control of blood pressure","type":"related"},{"name":"baroreceptor pressure buffer system","type":"related"},{"name":"carotid sinus baroreceptor feedback regulation of systemic arterial blood pressure","type":"exact"}],"termid":"GO:0001978"}


id: SO:0000484
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of the 3' exon that is not coding.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"noncoding_region_of_exon","termid":"SO:0001214"},{"relation_name":"part_of","term_name":"three_prime_coding_exon","termid":"SO:0000202"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_coding_exon_noncoding_region","synonyms":[{"name":"three prime coding exon noncoding region","type":"exact"},{"name":"three_prime_exon_noncoding_region","type":"exact"}],"termid":"SO:0000484"}


id: FYPO:0004589
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which localization of the gamma-tubulin complex to the spindle pole body is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein complex localization","termid":"FYPO:0001440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body","synonyms":[{"name":"abnormal gamma-tubulin complex localization to mitotic SPB","type":"exact"},{"name":"abnormal gamma-tubulin complex localisation to mitotic spindle pole body","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to mitotic spindle pole body during vegetative growth","type":"exact"},{"name":"abnormal gamma-tubulin complex localization to spindle pole body during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004589"}


id: PBO:0078846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily C member 2 (pseudogene)","termid":"PBO:0078846"}


id: PBO:0014252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mmi1-driven selective elimination factor Iss10","termid":"PBO:0014252"}


id: GO:0001867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the activation of any of the steps of the lectin pathway of the complement cascade which allows for the direct killing of microbes and the regulation of other immune processes.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complement activation","termid":"GO:0006956"},{"relation_name":"is_a","term_name":"innate immune response","termid":"GO:0045087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"complement activation, lectin pathway","synonyms":[{"name":"complement cascade, lectin pathway","type":"exact"}],"termid":"GO:0001867"}


id: PBO:0069717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 997, pseudogene","termid":"PBO:0069717"}


id: PBO:0078516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIM7 antisense RNA 2","termid":"PBO:0078516"}


id: GO:0009799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of an organism's body plan or part of an organism such that a similar arrangement in form and relationship of parts around a common axis, or around each side of a plane is created.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification process","termid":"GO:0007389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of symmetry","synonyms":[{"name":"determination of symmetry","type":"exact"}],"termid":"GO:0009799"}


id: GO:1902476
data:
  {"annotated_genes":["SJAG_03401","SJAG_02463","SJAG_01168"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96406,101745,106175,107724],"is_not":false,"summary":null,"term":"GO:1902476"}]},"cv_name":"biological_process","definition":"The process in which chloride is transported across a membrane.","definition_xrefs":["GOC:TermGenie","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride transport","termid":"GO:0006821"},{"relation_name":"is_a","term_name":"monoatomic anion transmembrane transport","termid":"GO:0098656"},{"relation_name":"is_a","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01168":null,"SJAG_02463":null,"SJAG_03401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"chloride transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902476","terms_by_termid":{"GO:1902476":null}}


id: GO:0018926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving methanesulfonic acid, a strong acid produced by the oxidation of dimethyl sulfide.","definition_xrefs":["UM-BBD_pathwayID:msa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"alkanesulfonate metabolic process","termid":"GO:0019694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"methanesulfonic acid metabolic process","synonyms":[{"name":"methanesulfonic acid metabolism","type":"exact"},{"name":"methanesulphonic acid metabolic process","type":"exact"},{"name":"methanesulphonic acid metabolism","type":"exact"}],"termid":"GO:0018926"}


id: PBO:0090503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Dbp3","termid":"PBO:0090503"}


id: GO:1990422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glyoxal + H2O = glycolic acid. Catalysis occurs in the absence of a cofactor.","definition_xrefs":["GOC:bf","PMID:22523093","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glyoxalase (glycolic acid-forming) activity","termid":"GO:1990422"}


id: GO:0003021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about the levels of carbon dioxide are received and are converted to a molecular signal by chemoreceptors in the carotid bodies and the aortic bodies.","definition_xrefs":["ISBN:0323031951","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of carbon dioxide","termid":"GO:0003031"},{"relation_name":"part_of","term_name":"detection of hypoxic conditions in blood by chemoreceptor signaling","termid":"GO:0002007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of increased carbon dioxide by chemoreceptor signaling","synonyms":[{"name":"detection of increased carbon dioxide by chemoreceptor signalling","type":"exact"}],"termid":"GO:0003021"}


id: GO:0102823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + kaempferol-3-rhamnoside = kaempferol 3-O-rhamnoside-7-O-glucoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete kaempferol-3-rhamnoside-glucosyltransferase activity (obsolete GO:0102823)","termid":"GO:0102823"}


id: FYPO:0003284
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of copper ions into a cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal copper import","termid":"FYPO:0003283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased copper import","synonyms":[{"name":"decreased cellular copper import","type":"exact"},{"name":"decreased copper cation import","type":"exact"},{"name":"decreased copper import during mitotic cell cycle","type":"related"},{"name":"decreased copper import during vegetative growth","type":"exact"},{"name":"decreased copper import into cell","type":"exact"},{"name":"decreased copper ion import","type":"exact"},{"name":"decreased copper ion import across plasma membrane","type":"exact"},{"name":"reduced copper import","type":"exact"}],"termid":"FYPO:0003284"}


id: SO:1000016
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transition of a guanine to an adenine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine_transition","termid":"SO:1000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G_to_A_transition","synonyms":[{"name":"G to A transition","type":"exact"}],"termid":"SO:1000016"}


id: PBO:0004671
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tandem fusion protein in S. cerevisiae, SPBC21C3.07c is related to the C-terminal region of YOR239W","termid":"PBO:0004671"}


id: FYPO:0006383
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A sporulation phenotype that results in the formation of an ascus that contains spores of non-uniform size and DNA content, as well as DNA that is not contained within any of the spores. There may also be fewer than four spores.","definition_xrefs":["PomBase:vw","PomBase:mah","PMID:17632059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sporulation resulting in formation of ascus containing non-uniform spores","termid":"FYPO:0000913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000121"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000121","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal sporulation resulting in formation of ascus containing non-uniform spores and unencapsulated DNA","synonyms":[{"name":"abnormal ascospore formation resulting in formation ascus containing non-uniform spores and unencapsulated DNA","type":"exact"},{"name":"abnormal sporulation resulting in formation of asci containing non-uniform spores and unencapsulated DNA","type":"related"},{"name":"abnormal sporulation resulting in formation of ascus containing non-uniform spores and DNA excluded from spores","type":"exact"}],"termid":"FYPO:0006383"}


id: GO:1904196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of granulosa cell proliferation.","definition_xrefs":["PMID:22383759","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"regulation of granulosa cell proliferation","termid":"GO:1904195"},{"relation_name":"negatively_regulates","term_name":"granulosa cell proliferation","termid":"GO:1990739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of granulosa cell proliferation","synonyms":[{"name":"down regulation of granulosa cell proliferation","type":"exact"},{"name":"down-regulation of granulosa cell proliferation","type":"exact"},{"name":"downregulation of granulosa cell proliferation","type":"exact"},{"name":"inhibition of granulosa cell proliferation","type":"narrow"}],"termid":"GO:1904196"}


id: PBO:0029200
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_clotrimazole","termid":"PBO:0029200"}


id: GO:0046707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving IDP, inosine 5'-diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate metabolic process","termid":"GO:0009179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"IDP metabolic process","synonyms":[{"name":"IDP metabolism","type":"exact"}],"termid":"GO:0046707"}


id: PBO:0064674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 9","termid":"PBO:0064674"}


id: GO:0097208
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized secretory organelle found in type II pneumocytes and involved in the synthesis, secretion, and reutilization of pulmonary surfactant.","definition_xrefs":["Wikipedia:Lamellar_granule","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lamellar body","termid":"GO:0042599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"alveolar lamellar body","termid":"GO:0097208"}


id: GO:0006044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide group of a glycoprotein.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosamine-containing compound metabolic process","termid":"GO:1901071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-acetylglucosamine metabolic process","synonyms":[{"name":"N-acetylglucosamine metabolism","type":"exact"}],"termid":"GO:0006044"}


id: PBO:0047270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 247 member B","termid":"PBO:0047270"}


id: GO:0048212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which Golgi vesicle coat proteins are depolymerized, and released for reuse.","definition_xrefs":["PMID:10219233","GOC:jid","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle uncoating","termid":"GO:0072319"},{"relation_name":"part_of","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"Golgi vesicle uncoating","synonyms":[{"name":"Golgi vesicle coat depolymerization","type":"exact"},{"name":"Golgi vesicle coat protein depolymerization","type":"exact"},{"name":"Golgi-derived vesicle uncoating","type":"exact"},{"name":"dictyosome vesicle coat depolymerization","type":"narrow"}],"termid":"GO:0048212"}


id: GO:0072659
data:
  {"annotated_genes":["SJAG_01114","SJAG_00030","SJAG_03756","SJAG_04158","SJAG_00916","SJAG_03810","SJAG_02231","SJAG_02177","SJAG_01809","SJAG_01516","SJAG_04609","SJAG_03453","SJAG_04930","SJAG_00144","SJAG_02392","SJAG_03838","SJAG_03029","SJAG_02583","SJAG_03970","SJAG_04434","SJAG_04597","SJAG_02282","SJAG_03915","SJAG_04923","SJAG_00379","SJAG_00858","SJAG_04565","SJAG_02912","SJAG_00330"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67469,85593,86606,86905,97455,111020,114532],"is_not":false,"summary":null,"term":"GO:0072659"},{"annotations":[114564,114949,90951,88330,97188,109072,103422,87342,108847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099638"},{"annotations":[91782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061951"},{"annotations":[91209,105632,109074,104849,103094,102458,94774,87218,103201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043001"},{"annotations":[84156],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0042997"},{"annotations":[90467],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0140325"},{"annotations":[91914],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903077"},{"annotations":[100703],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903078"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a specific location in the plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00144":null,"SJAG_00330":null,"SJAG_00379":null,"SJAG_00858":null,"SJAG_00916":null,"SJAG_01114":null,"SJAG_01516":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02231":null,"SJAG_02282":null,"SJAG_02392":null,"SJAG_02583":null,"SJAG_02912":null,"SJAG_03029":null,"SJAG_03453":null,"SJAG_03756":null,"SJAG_03810":null,"SJAG_03838":null,"SJAG_03915":null,"SJAG_03970":null,"SJAG_04158":null,"SJAG_04434":null,"SJAG_04565":null,"SJAG_04597":null,"SJAG_04609":null,"SJAG_04923":null,"SJAG_04930":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to plasma membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0090002","GO:0072661"],"synonyms":[{"name":"protein localisation in plasma membrane","type":"related"},{"name":"protein localization in plasma membrane","type":"related"},{"name":"protein targeting to plasma membrane","type":"related"},{"name":"protein-plasma membrane targeting","type":"related"}],"termid":"GO:0072659","terms_by_termid":{"GO:0042997":null,"GO:0043001":null,"GO:0061951":null,"GO:0072659":null,"GO:0099638":null,"GO:0140325":null,"GO:1903077":null,"GO:1903078":null}}


id: PBO:0081132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP3 divergent transcript","termid":"PBO:0081132"}


id: GO:1901352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidylglycerol biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:dgf","PMID:12869188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid biosynthetic process","termid":"GO:0071072"},{"relation_name":"is_a","term_name":"regulation of phosphatidylglycerol biosynthetic process","termid":"GO:1901351"},{"relation_name":"negatively_regulates","term_name":"phosphatidylglycerol biosynthetic process","termid":"GO:0006655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of phosphatidylglycerol biosynthetic process","synonyms":[{"name":"down regulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"down regulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"down regulation of phosphatidylglycerol biosynthetic process","type":"exact"},{"name":"down regulation of phosphatidylglycerol formation","type":"exact"},{"name":"down regulation of phosphatidylglycerol synthesis","type":"exact"},{"name":"down-regulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"down-regulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"down-regulation of phosphatidylglycerol biosynthetic process","type":"exact"},{"name":"down-regulation of phosphatidylglycerol formation","type":"exact"},{"name":"down-regulation of phosphatidylglycerol synthesis","type":"exact"},{"name":"downregulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"downregulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"downregulation of phosphatidylglycerol biosynthetic process","type":"exact"},{"name":"downregulation of phosphatidylglycerol formation","type":"exact"},{"name":"downregulation of phosphatidylglycerol synthesis","type":"exact"},{"name":"inhibition of phosphatidylglycerol anabolism","type":"narrow"},{"name":"inhibition of phosphatidylglycerol biosynthesis","type":"narrow"},{"name":"inhibition of phosphatidylglycerol biosynthetic process","type":"narrow"},{"name":"inhibition of phosphatidylglycerol formation","type":"narrow"},{"name":"inhibition of phosphatidylglycerol synthesis","type":"narrow"},{"name":"negative regulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"negative regulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"negative regulation of phosphatidylglycerol formation","type":"exact"},{"name":"negative regulation of phosphatidylglycerol synthesis","type":"exact"}],"termid":"GO:1901352"}


id: PBO:0047576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor 1","termid":"PBO:0047576"}


id: GO:2000641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of early endosome to late endosome transport.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"regulates","term_name":"early endosome to late endosome transport","termid":"GO:0045022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"regulation of early endosome to late endosome transport","termid":"GO:2000641"}


id: MOD:00136
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to pyruvic acid.","definition_xrefs":["PubMed:10085076","PubMed:8464063","RESID:AA0127#CYS","PubMed:3042771","Unimod:382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"pyruvic acid","termid":"MOD:01154"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvic acid (Cys)","synonyms":[{"name":"2-oxopropanoic acid","type":"exact"},{"name":"MOD_RES Pyruvic acid (Cys)","type":"exact"},{"name":"Pyruv(Cys)","type":"exact"},{"name":"pyruvic acid","type":"exact"}],"termid":"MOD:00136"}


id: GO:0101016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the FMN-binding domain of a protein.","definition_xrefs":["PMID:15752726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"FMN-binding domain binding","termid":"GO:0101016"}


id: PBO:0055898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 19","termid":"PBO:0055898"}


id: GO:0090046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription regulator activity, any molecular function that plays a role in regulating transcription; may bind a promoter or enhancer DNA sequence or interact with a DNA-binding transcription factor.","definition_xrefs":["GOC:BHF","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription regulator activity (obsolete GO:0090046)","synonyms":[{"name":"regulation of transcription regulator activity","type":"exact"}],"termid":"GO:0090046"}


id: PBO:0003918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type m-specific polypeptide mi 1","termid":"PBO:0003918"}


id: GO:1903118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of urate within an organism or cell.","definition_xrefs":["GO_REF:0000072","GOC:dph","GOC:TermGenie","PMID:22306318"],"gene_count":0,"genotype_count":0,"name":"obsolete urate homeostasis (obsolete GO:1903118)","termid":"GO:1903118"}


id: PBO:0027717
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_transport_gene_mRNA_during_vegetative_growth","termid":"PBO:0027717"}


id: PBO:0039456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 7","termid":"PBO:0039456"}


id: GO:0010162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A dormancy process in which dormancy (sometimes called a dormant state) is induced, maintained or broken in a seed. Seed dormancy is a suspension of most physiological activity and growth in a seed, including the embryo contained therein, that can be reactivated. It often requires special conditions for reactivation, such as specific temperature, scarification, or leaching of inhibitors.","definition_xrefs":["GOC:PO_curators","GOC:lr","ISBN:9781405139830","PO_REF:00009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"},{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"seed maturation","termid":"GO:0010431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed dormancy process","secondary_identifiers":["Wikipedia:Seed#Seed_dormancy_and_protection"],"synonyms":[{"name":"seed dormancy","type":"related"}],"termid":"GO:0010162"}


id: PBO:0028992
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_proline_import","termid":"PBO:0028992"}


id: PBO:0062708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily G member 2","termid":"PBO:0062708"}


id: FYPO:0001563
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular glutamate level","secondary_identifiers":["FYPO:0001615"],"synonyms":[{"name":"decreased cellular L-glutamate level","type":"exact"},{"name":"decreased cellular glutamate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular glutamate level during vegetative growth","type":"exact"},{"name":"decreased cellular glutamic acid level","type":"related"},{"name":"decreased glutamate accumulation","type":"related"},{"name":"reduced cellular glutamate level","type":"exact"}],"termid":"FYPO:0001563"}


id: MOD:01726
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Proteome Sciences TMT6plex-126 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-126 reporter+balance reagent acylated residue","termid":"MOD:01720"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-126 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01726"}


id: PBO:0005422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial matrix PGP phosphatase involved in cardiolipin biosynthesis Gep4 (predicted)","termid":"PBO:0005422"}


id: PBO:0088219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. japonicus specific family with GPPY motif and periodic tyrosine","termid":"PBO:0088219"}


id: GO:0034203
data:
  {"annotated_genes":["SJAG_03774","SJAG_02897"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90482,108617],"is_not":false,"summary":null,"term":"GO:0034203"}]},"cv_name":"biological_process","definition":"The translocation, or flipping, of glycolipid molecules from one monolayer of a membrane bilayer to the opposite monolayer.","definition_xrefs":["PMID:11807558","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid translocation","termid":"GO:0034204"},{"relation_name":"is_a","term_name":"glycolipid transport","termid":"GO:0046836"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02897":null,"SJAG_03774":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0061024","GO:0051179"],"is_obsolete":false,"name":"glycolipid translocation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034203","terms_by_termid":{"GO:0034203":null}}


id: GO:1900383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates synaptic plasticity, the ability of synapses to change as circumstances require, via receptor localization to the synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell. Processes may include receptor transport to, and/or maintenance at, the synapse.","definition_xrefs":["PMID:22464329","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor localization to synapse","termid":"GO:0097120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"regulation of synaptic plasticity by receptor localization to synapse","synonyms":[{"name":"regulation of synaptic plasticity by receptor localisation to synapse","type":"exact"}],"termid":"GO:1900383"}


id: GO:0030071
data:
  {"annotated_genes":["SJAG_04968","SJAG_04259","SJAG_02336","SJAG_04884","SJAG_04573","SJAG_03048","SJAG_01805","SJAG_04126","SJAG_01679","SJAG_03681","SJAG_01082","SJAG_03126","SJAG_02498","SJAG_01837","SJAG_00666","SJAG_01297","SJAG_03353","SJAG_02380","SJAG_02451","SJAG_04999","SJAG_00883","SJAG_04699","SJAG_02169","SJAG_01330"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103285,109848,86780,99959,104307,110336,108020,111970,95647],"is_not":false,"rel_names":["negatively_regulates","is_a","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[110565,105960,109852,111626,95493,86782,97856,112752,102365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[111627,102366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045841"},{"annotations":[90259],"is_not":false,"rel_names":["is_a","regulates","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[112756],"is_not":false,"rel_names":["is_a","regulates","positively_regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[110836,98444,93758,89861,110337,96199,98171,107436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"},{"annotations":[90260],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the cell cycle process in which a cell progresses from metaphase to anaphase during mitosis, triggered by the activation of the anaphase promoting complex by Cdc20/Sleepy homolog which results in the degradation of Securin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle phase transition","termid":"GO:1901990"},{"relation_name":"is_a","term_name":"regulation of metaphase/anaphase transition of cell cycle","termid":"GO:1902099"},{"relation_name":"regulates","term_name":"metaphase/anaphase transition of mitotic cell cycle","termid":"GO:0007091"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00666":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04573":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04968":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044772"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0044772"],"is_obsolete":false,"name":"regulation of mitotic metaphase/anaphase transition","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030071","terms_by_termid":{"GO:0007094":null,"GO:0045841":null,"GO:0045842":null,"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null}}


id: PBO:0080795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-prolyl aminopeptidase 2","termid":"PBO:0080795"}


id: PBO:0067013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 22, pseudogene","termid":"PBO:0067013"}


id: GO:0045136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the secondary sexual characteristics over time, from their formation to the mature structures. In humans, these include growth of axillary, chest, and pubic hair, voice changes, testicular/penile enlargement, breast development and menstrual periods. Development occurs in response to sex hormone secretion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"development of secondary sexual characteristics","termid":"GO:0045136"}


id: PBO:0001584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complex subunit Ssr2","termid":"PBO:0001584"}


id: GO:0045270
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. One of two stalks that connect the catalytic core of the hydrogen-transporting ATP synthase to the plasma membrane-associated Fo proteins; rotates within the catalytic core during catalysis. Examples of this component are found in Bacterial species.","definition_xrefs":["GOC:mtg_sensu","PMID:10838056"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane proton-transporting ATP synthase, central stalk (obsolete GO:0045270)","synonyms":[{"name":"hydrogen-transporting ATP synthase, central stalk","type":"broad"},{"name":"proton-transporting ATP synthase, central stalk","type":"broad"}],"termid":"GO:0045270"}


id: GO:0045315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of compound eye photoreceptor development.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of eye photoreceptor cell development","termid":"GO:0042479"},{"relation_name":"is_a","term_name":"regulation of compound eye photoreceptor development","termid":"GO:0045314"},{"relation_name":"positively_regulates","term_name":"compound eye photoreceptor development","termid":"GO:0042051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of compound eye photoreceptor development","synonyms":[{"name":"activation of eye photoreceptor development","type":"broad"},{"name":"positive regulation of eye photoreceptor development","type":"broad"},{"name":"stimulation of eye photoreceptor development","type":"broad"},{"name":"up regulation of eye photoreceptor development","type":"broad"},{"name":"up-regulation of eye photoreceptor development","type":"broad"},{"name":"upregulation of eye photoreceptor development","type":"broad"}],"termid":"GO:0045315"}


id: PBO:0052465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF11 divergent transcript","termid":"PBO:0052465"}


id: PBO:0069743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1024, pseudogene","termid":"PBO:0069743"}


id: GO:0034598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the removal of the phosphate group from phosphothreonine by cleavage of the C-OP bond with the concomitant abstraction of the alpha proton, generating a double bond-containing product.","definition_xrefs":["PMID:17303758","PMID:18084305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"phosphothreonine lyase activity","termid":"GO:0034598"}


id: PBO:0044683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage inducible transcript 4 like","termid":"PBO:0044683"}


id: GO:0033201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: RDP-glucose + [alpha-D-glucosyl-(1,4)]n = RDP + [alpha-D-glucosyl-(1,4)]n+1, where RDP is ADP or UDP.","definition_xrefs":["PMID:17472966"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-1,4-glucan synthase activity (obsolete GO:0033201)","synonyms":[{"name":"1,4-alpha-glucan synthase activity","type":"exact"}],"termid":"GO:0033201"}


id: GO:0019841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to retinol, vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A. Retinol is an intermediate in the vision cycle and it also plays a role in growth and differentiation.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoid binding","termid":"GO:0005501"},{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"retinol binding","synonyms":[{"name":"vitamin A1 alcohol binding","type":"exact"},{"name":"vitamin A1 binding","type":"exact"}],"termid":"GO:0019841"}


id: PBO:0070099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 13 pseudogene","termid":"PBO:0070099"}


id: GO:0002947
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A receptor complex that contains one or more members of the tumor necrosis factor (TNF) receptor superfamily.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"tumor necrosis factor receptor superfamily complex","synonyms":[{"name":"TNF receptor superfamily complex","type":"related"}],"termid":"GO:0002947"}


id: PBO:0088081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ub-like protein; Ub-like protein conjugated to phosphatidylethanolamine (PE); role in membrane fusion during autophagosome formation; membrane anchored Atg8p-PE is involved in phagophore expansion during autophagosome formation; deconjugation is also required for biogenesis; targets Atg1p to autophagosomes; binds to the Atg1p-Atg13p complex, triggers its vacuolar degradation; role in vacuolar membrane protein turnover during early stationary phase; component of autophagosomes and Cvt vesicles","termid":"PBO:0088081"}


id: PBO:0068295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 2","termid":"PBO:0068295"}


id: PBO:0044071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin B","termid":"PBO:0044071"}


id: GO:0106310
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: ATP + protein serine = ADP + protein serine phosphate.","definition_xrefs":["RHEA:17989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0004672","GO:0003674","GO:0140096","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"protein serine kinase activity","secondary_identifiers":["Reactome:R-HSA-9821982","Reactome:R-HSA-9821967","Reactome:R-HSA-9729330"],"synonyms":[{"name":"protein-serine kinase activity","type":"exact"}],"termid":"GO:0106310"}


id: PBO:0091451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA queuosine nucleoside glycosylase Qng1","termid":"PBO:0091451"}


id: PBO:0028796
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_binding_at_rDNA_replication_fork_barrier","termid":"PBO:0028796"}


id: PBO:0062763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily Q member 1 pseudogene","termid":"PBO:0062763"}


id: GO:0006299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The repair of mismatched DNA where the gap to be repaired is only one nucleotide. DNA polymerase is the preferred polymerase in short patch repair, performing gap filling DNA synthesis and removal of the 5'-deoxyribose phosphate of the abasic site.","definition_xrefs":["PMID:10660619","PMID:10878254"],"gene_count":0,"genotype_count":0,"name":"obsolete short patch mismatch repair system (obsolete GO:0006299)","synonyms":[{"name":"short patch mismatch repair system","type":"exact"}],"termid":"GO:0006299"}


id: GO:0047848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + dephospho-[[hydroxymethylglutaryl-CoA reductase (NADPH)] kinase] = ADP + [[hydroxymethylglutaryl-CoA reductase (NADPH)] kinase].","definition_xrefs":["MetaCyc:DEPHOSPHO-REDUCTASE-KINASE-KINASE-RXN","EC:2.7.11.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0004672","GO:0140096","GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"dephospho-[reductase kinase] kinase activity","synonyms":[{"name":"AMP-activated kinase activity","type":"related"},{"name":"AMP-activated protein kinase kinase activity","type":"related"},{"name":"ATP:dephospho-{hydroxymethylglutaryl-CoA reductase (NADPH)kinase} phosphotransferase activity","type":"related"},{"name":"STK30","type":"related"},{"name":"dephospho-reductase kinase kinase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A reductase kinase kinase (phosphorylating) activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A reductase kinase kinase activity","type":"related"},{"name":"reductase kinase activity","type":"broad"},{"name":"reductase kinase kinase activity","type":"related"}],"termid":"GO:0047848"}


id: PBO:0055059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2475","termid":"PBO:0055059"}


id: PBO:0057273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 497","termid":"PBO:0057273"}


id: PBO:0052743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 35","termid":"PBO:0052743"}


id: GO:0009047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global hyperactivation of all, or most of, the genes on the X-chromosome in the heterogametic sex, leading to a two-fold increase in gene expression from this chromosome. An example of this is found in Drosophila melanogaster.","definition_xrefs":["PMID:1568251","GOC:mr","GOC:jl","PMID:11498577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex-chromosome dosage compensation","termid":"GO:0007549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006325","GO:0008150"],"is_obsolete":false,"name":"dosage compensation by hyperactivation of X chromosome","secondary_identifiers":["Wikipedia:XY_sex-determination_system"],"termid":"GO:0009047"}


id: PR:O13875
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B3.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized Sel1-like repeat-containing protein C1B3.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.10c","synonyms":[{"name":"Spom972h-SPAC1B3.10c","type":"exact"}],"termid":"PR:O13875"}


id: GO:0000973
data:
  {"annotated_genes":["SJAG_03299","SJAG_04347","SJAG_04148","SJAG_00298"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68988,85070,98024,106483],"is_not":false,"summary":null,"term":"GO:0000973"}]},"cv_name":"biological_process","definition":"The chromosome organization process in which the DNA sequence containing a gene transcribed by RNA polymerase II is maintained in a specific location at the nuclear periphery even after transcription has been repressed.","definition_xrefs":["GOC:krc","PMID:18614049","PMID:17373856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery","termid":"GO:0000972"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00298":null,"SJAG_03299":null,"SJAG_04148":null,"SJAG_04347":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery","type":"exact"}],"termid":"GO:0000973","terms_by_termid":{"GO:0000973":null}}


id: GO:0070635
data:
  {"annotated_genes":["SJAG_00957"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86713],"is_not":false,"summary":null,"term":"GO:0070635"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: nicotinamide riboside + H2O = nicotinamide + D-ribose.","definition_xrefs":["MetaCyc:RXN-8441","PMID:19001417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"nicotinamide riboside hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"N-ribosylnicotinamide hydrolase activity","type":"exact"},{"name":"nicotinamide ribonucleoside hydrolase activity","type":"exact"}],"termid":"GO:0070635","terms_by_termid":{"GO:0070635":null}}


id: PBO:0048810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit beta 4","termid":"PBO:0048810"}


id: SO:0000301
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature where recombination has occurred for the purpose of generating a diversity in the immune system.","direct_ancestors":[{"relation_name":"is_a","term_name":"recombination_feature_of_rearranged_gene","termid":"SO:0000300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebrate_immune_system_gene_recombination_feature","synonyms":[{"name":"vertebrate immune system gene recombination feature","type":"exact"}],"termid":"SO:0000301"}


id: PBO:0079040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 1-2","termid":"PBO:0079040"}


id: PBO:0067850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 152","termid":"PBO:0067850"}


id: PBO:0070294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, Ro60-associated Y1","termid":"PBO:0070294"}


id: PBO:0066968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 270","termid":"PBO:0066968"}


id: PBO:0053441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 387","termid":"PBO:0053441"}


id: GO:0033760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxymugineate + 2-oxoglutarate + O2 = CO2 + H+ + mugineate + succinate.","definition_xrefs":["RHEA:12200","EC:1.14.11.24"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2'-deoxymugineic-acid 2'-dioxygenase activity","secondary_identifiers":["MetaCyc:1.14.11.24-RXN","KEGG_REACTION:R07185"],"synonyms":[{"name":"2'-deoxymugineic acid,2-oxoglutarate:oxygen oxidoreductase (2-hydroxylating) activity","type":"related"},{"name":"IDS3","type":"related"}],"termid":"GO:0033760"}


id: GO:0071958
data:
  {"annotated_genes":["SJAG_04140","SJAG_03048","SJAG_04461","SJAG_04468","SJAG_02246","SJAG_05196","SJAG_03376","SJAG_02232","SJAG_03936","SJAG_00333"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87185,95912,96999,98415,98877,101400,102428,103193,106575,107250],"is_not":false,"summary":null,"term":"GO:0071958"}]},"cv_name":"cellular_component","definition":"The spindle pole body that is formed by spindle pole body duplication, and to which proteins involved in mitotic exit signaling (for example, the septation initiation network in fission yeast) localize.","definition_xrefs":["GOC:vw","PMID:15132994","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle pole body","termid":"GO:0044732"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00333":null,"SJAG_02232":null,"SJAG_02246":null,"SJAG_03048":null,"SJAG_03376":null,"SJAG_03936":null,"SJAG_04140":null,"SJAG_04461":null,"SJAG_04468":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005816"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005816","GO:0015630","GO:0005575"],"is_obsolete":false,"name":"new mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"new SPB","type":"exact"}],"termid":"GO:0071958","terms_by_termid":{"GO:0071958":null}}


id: PBO:0030160
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_chromatin_during_vegetative_growth","termid":"PBO:0030160"}


id: PBO:0031858
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_spindle","termid":"PBO:0031858"}


id: SO:0001163
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter motif with consensus sequence TCATTCG.","definition_xrefs":["PMID:16827941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INR1_motif","synonyms":[{"name":"DMp3","type":"exact"},{"name":"INR1 motif","type":"exact"},{"name":"directional motif p3","type":"exact"},{"name":"directional promoter motif 3","type":"exact"}],"termid":"SO:0001163"}


id: PBO:0060780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B9 pseudogene 2","termid":"PBO:0060780"}


id: PBO:0050183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1","termid":"PBO:0050183"}


id: PBO:0091402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S12","termid":"PBO:0091402"}


id: PBO:0062679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 14 subfamily L member 1","termid":"PBO:0062679"}


id: PBO:0056671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 29","termid":"PBO:0056671"}


id: PBO:0079217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiosulfate sulfurtransferase like domain containing 2","termid":"PBO:0079217"}


id: GO:0032497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a lipopolysaccharide stimulus is received by a cell and converted into a molecular signal. Lipopolysaccharide is a major component of the cell wall of gram-negative bacteria.","definition_xrefs":["PMID:15998797","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of molecule of bacterial origin","termid":"GO:0032490"},{"relation_name":"is_a","term_name":"response to lipopolysaccharide","termid":"GO:0032496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of lipopolysaccharide","synonyms":[{"name":"detection of LPS","type":"exact"}],"termid":"GO:0032497"}


id: PBO:0052586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich nucleolar protein 1 pseudogene 4","termid":"PBO:0052586"}


id: GO:0010584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the pollen exine. The reticulate pollen wall pattern consists of two layers, exine and intine.","definition_xrefs":["GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pollen wall assembly","termid":"GO:0010208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"pollen exine formation","termid":"GO:0010584"}


id: FYPO:0007354
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is normal (i.e. indistinguishable from wild type) at a cis-acting homologous chromosome pairing region on chromosome 3.","definition_xrefs":["PomBase:mah","PMID:31811152","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 3","synonyms":[{"name":"normal homologous chromosome pairing at RNA584 locus","type":"narrow"},{"name":"normal homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region on chromosome 3","type":"exact"},{"name":"normal synapsis at cis-acting homologous chromosome pairing region on chromosome 3","type":"exact"}],"termid":"FYPO:0007354"}


id: GO:0030193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of blood coagulation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"regulation of coagulation","termid":"GO:0050818"},{"relation_name":"is_a","term_name":"regulation of wound healing","termid":"GO:0061041"},{"relation_name":"is_a","term_name":"regulation of hemostasis","termid":"GO:1900046"},{"relation_name":"regulates","term_name":"blood coagulation","termid":"GO:0007596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of blood coagulation","termid":"GO:0030193"}


id: PBO:0046198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin A3 family member B, pseudogene","termid":"PBO:0046198"}


id: PBO:0006178
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_direct_regulator","termid":"PBO:0006178"}


id: GO:0051475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of glucosylglycerol, alpha-D-glucopyranosyl-alpha-(1,2)-glycerol, across a membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transport","termid":"GO:0015791"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"},{"relation_name":"is_a","term_name":"glycoside transport","termid":"GO:1901656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"glucosylglycerol transmembrane transport","synonyms":[{"name":"glucosylglycerol transport","type":"broad"}],"termid":"GO:0051475"}


id: PBO:0091984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf meiotic drive antidote-like Wtf21","termid":"PBO:0091984"}


id: PBO:0056401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPT antisense RNA 1","termid":"PBO:0056401"}


id: PATO:0001208
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An odor quality inhering in a bearer by virtue of the bearer's lacking odour.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odor","termid":"PATO:0000058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odorless","termid":"PATO:0001208"}


id: FYPO:0006139
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 2-myristoylglycerophosphocholine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah","PMID:28667014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular 2-myristoylglycerophosphocholine level","synonyms":[{"name":"increased 2-myristoylglycerophosphocholine accumulation","type":"related"},{"name":"increased cellular 2-myristoylglycerophosphocholine level during mitotic cell cycle","type":"related"},{"name":"increased cellular 2-myristoylglycerophosphocholine level during vegetative growth","type":"exact"},{"name":"increased cellular 2-tetradecanoyl-sn-glycero-3-phosphocholine level","type":"exact"}],"termid":"FYPO:0006139"}


id: GO:1902282
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a voltage-gated channel through the plasma membrane of a ventricular cardiomyocyte contributing to the repolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:TermGenie","PMID:8528244","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity involved in cardiac muscle cell action potential repolarization","termid":"GO:0086008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization","synonyms":[{"name":"voltage gated potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"narrow"},{"name":"voltage-dependent potassium channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"voltage-gated potassium ion channel activity involved in ventricular cardiac muscle cell action potential","type":"exact"},{"name":"voltage-sensitive potassium channel involved in ventricular cardiac muscle cell action potential","type":"exact"}],"termid":"GO:1902282"}


id: PR:Q76PD2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1223.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q76PD2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase hel2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.01","synonyms":[{"name":"Spom972h-SPCC1223.01","type":"exact"},{"name":"histone E3 ligase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q76PD2"}


id: PBO:0046840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 13","termid":"PBO:0046840"}


id: PBO:0082231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha' catalytic subunit of casein kinase 2 (CK2); CK2 is a Ser/Thr protein kinase with roles in cell growth and proliferation; CK2, comprised of CKA1, CKA2, CKB1 and CKB2, has many substrates including transcription factors and all RNA polymerases; protein abundance increases in response to DNA replication stress; regulates Fkh1p-mediated donor preference during mating-type switching","termid":"PBO:0082231"}


id: GO:1905201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of gibberellin from one side of a membrane to the other.","definition_xrefs":["GO_REF:0000070","PMID:27139299","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"},{"relation_name":"is_a","term_name":"lipid transmembrane transporter activity","termid":"GO:0170055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"gibberellin transmembrane transporter activity","termid":"GO:1905201"}


id: PBO:0080679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wolf-Hirschhorn syndrome candidate 1-like 2, pseudogene","termid":"PBO:0080679"}


id: PBO:0076317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptopodin","termid":"PBO:0076317"}


id: GO:0034221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of cell wall chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues, found in the walls of fungal cells.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete fungal-type cell wall chitin biosynthetic process (obsolete GO:0034221)","synonyms":[{"name":"fungal-type cell wall chitin anabolism","type":"exact"},{"name":"fungal-type cell wall chitin biosynthesis","type":"exact"},{"name":"fungal-type cell wall chitin formation","type":"exact"},{"name":"fungal-type cell wall chitin synthesis","type":"exact"}],"termid":"GO:0034221"}


id: MOD:00415
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod - OBSOLETE because Unimod entry 22 is now merged with entry 21 remap to MOD:00696 'phosphorylated residue'.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00415 phosphorylation without neutral loss (obsolete MOD:00415)","termid":"MOD:00415"}


id: GO:0032790
data:
  {"annotated_genes":["SJAG_00898","SJAG_04283","SJAG_03189","SJAG_04862","SJAG_04635","SJAG_01497","SJAG_02746","SJAG_05000","SJAG_01074","SJAG_02096","SJAG_00188","SJAG_03232"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100756,101638,107585,112104],"is_not":false,"summary":null,"term":"GO:0032790"},{"annotations":[110476],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140708"},{"annotations":[99193,95508,102918,112163,87916,83987,110071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072344"}]},"cv_name":"biological_process","definition":"The disaggregation of a ribosome into its constituent components; includes the dissociation of ribosomal subunits.","definition_xrefs":["GOC:vk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00188":null,"SJAG_00898":null,"SJAG_01074":null,"SJAG_01497":null,"SJAG_02096":null,"SJAG_02746":null,"SJAG_03189":null,"SJAG_03232":null,"SJAG_04283":null,"SJAG_04635":null,"SJAG_04862":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ribosome disassembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ribosome dissociation factor","type":"related"},{"name":"ribosome recycling","type":"narrow"}],"termid":"GO:0032790","terms_by_termid":{"GO:0032790":null,"GO:0072344":null,"GO:0140708":null}}


id: GO:0070914
data:
  {"annotated_genes":["SJAG_02199","SJAG_04190","SJAG_04877","SJAG_02182","SJAG_01262","SJAG_00814","SJAG_00208","SJAG_02200","SJAG_05197","SJAG_02334","SJAG_01010","SJAG_01648","SJAG_02828","SJAG_04150","SJAG_00272","SJAG_00863","SJAG_03898","SJAG_00729","SJAG_02818"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84080,85641,89715,90024,91117,91330,92079,93192,100294,101986,103036,106880,107483,108338,108893],"is_not":false,"summary":null,"term":"GO:0070914"},{"annotations":[91296,100977,98892,105163],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904161"}]},"cv_name":"biological_process","definition":"A DNA repair process that is initiated by an endonuclease that introduces a single-strand incision immediately 5' of a UV-induced damage site. UV-damage excision repair acts on both cyclobutane pyrimidine dimers (CPDs) and pyrimidine-pyrimidone 6-4 photoproducts (6-4PPs).","definition_xrefs":["PMID:9619100","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair","termid":"GO:0006281"},{"relation_name":"is_a","term_name":"cellular response to UV","termid":"GO:0034644"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00208":null,"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02200":null,"SJAG_02334":null,"SJAG_02818":null,"SJAG_02828":null,"SJAG_03898":null,"SJAG_04150":null,"SJAG_04190":null,"SJAG_04877":null,"SJAG_05197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"UV-damage excision repair","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"AER","type":"related"},{"name":"UV-damaged DNA endonuclease-dependent excision repair","type":"exact"},{"name":"UVDE-dependent excision repair","type":"exact"},{"name":"UVER","type":"exact"},{"name":"alternative excision repair","type":"related"}],"termid":"GO:0070914","terms_by_termid":{"GO:0070914":null,"GO:1904161":null}}


id: PR:O59737
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gyp1 gene.","definition_xrefs":["UniProtKB:O59737","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein gyp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.01","synonyms":[{"name":"GAP for ypt1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gyp1","type":"exact"}],"termid":"PR:O59737"}


id: PBO:0042271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 7","termid":"PBO:0042271"}


id: PBO:0066936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 238","termid":"PBO:0066936"}


id: PR:Q96WW1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- omh5 gene.","definition_xrefs":["UniProtKB:Q96WW1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha-1,2-mannosyltransferase homolog 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.08c","synonyms":[{"name":"Spom972h-omh5","type":"exact"}],"termid":"PR:Q96WW1"}


id: FYPO:0000578
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which gene silencing is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal gene silencing","synonyms":[{"name":"normal gene silencing during mitotic cell cycle","type":"related"},{"name":"normal gene silencing during vegetative growth","type":"exact"},{"name":"silencing: normal","type":"related"}],"termid":"FYPO:0000578"}


id: PBO:0005160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Brl2","termid":"PBO:0005160"}


id: GO:0002502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a peptide to the antigen binding groove of an MHC class I protein complex. Class I here refers to classical class I molecules.","definition_xrefs":["GOC:add","PMID:15771591","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide antigen assembly with MHC protein complex","termid":"GO:0002501"},{"relation_name":"part_of","term_name":"MHC class I protein complex assembly","termid":"GO:0002397"},{"relation_name":"part_of","term_name":"antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"peptide antigen assembly with MHC class I protein complex","termid":"GO:0002502"}


id: GO:0140552
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex that is composed of the one DNA binding protein of the TEAD family and the transcriptional coactivator YAP.","definition_xrefs":["PMID:11358867","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"TEAD-YAP complex","secondary_identifiers":["CORUM:2870","GO:0071149","GO:0071147","GO:0071148","GO:0071150","GO:0071151"],"synonyms":[{"name":"TEAD-1-YAP complex","type":"narrow"},{"name":"TEAD-2 multiprotein complex","type":"narrow"},{"name":"TEAD-2-YAP complex","type":"narrow"},{"name":"TEAD-3-YAP complex","type":"narrow"},{"name":"TEAD-4-YAP complex","type":"narrow"}],"termid":"GO:0140552"}


id: GO:0071548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a dexamethasone stimulus.","definition_xrefs":["GOC:mah","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to glucocorticoid","termid":"GO:0051384"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to dexamethasone","synonyms":[{"name":"response to dexamethasone stimulus","type":"exact"}],"termid":"GO:0071548"}


id: PBO:0087179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I second largest subunit A135","termid":"PBO:0087179"}


id: PBO:0078811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA selenocysteine 1 associated protein 1","termid":"PBO:0078811"}


id: SO:0001284
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2-thiocytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_thiocytidine","secondary_identifiers":["RNAMOD:023"],"synonyms":[{"name":"2-thiocytidine","type":"exact"},{"name":"s2C","type":"exact"},{"name":"two thiocytidine","type":"exact"}],"termid":"SO:0001284"}


id: PBO:0069832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1118, pseudogene","termid":"PBO:0069832"}


id: FYPO:0005931
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal at the silent mating-type cassettes. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PomBase:mah","PMID:24662054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nucleosome occupancy","termid":"FYPO:0004491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased nucleosome occupancy at silent mating-type cassette","synonyms":[{"name":"decreased nucleosome occupancy at mating-type region heterochromatin","type":"exact"},{"name":"decreased nucleosome occupancy at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy at silent mating-type cassette during vegetative growth","type":"exact"},{"name":"decreased nucleosome occupancy in silent mating-type cassette","type":"exact"},{"name":"reduced nucleosome occupancy at silent mating-type cassette","type":"exact"}],"termid":"FYPO:0005931"}


id: GO:0102817
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: delphinidin 3-O-glucosyl-5-O-(caffeoylglucoside-3'-O-glucoside) + caffeoyl-CoA = gentiodelphin + coenzyme A.","definition_xrefs":["EC:2.3.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"caffeoyl-CoA:3-O-glucosyl-5-O-(caffeoylglucoside-3'-O-glucoside) 3'-O-hydroxycinnamoyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8235"],"termid":"GO:0102817"}


id: FYPO:0000453
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the total amount of DNA in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered DNA level during vegetative growth","termid":"FYPO:0004321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"DNA content decreased during vegetative growth","synonyms":[{"name":"DNA content decreased during mitotic cell cycle","type":"related"},{"name":"DNA content reduced during vegetative growth","type":"exact"},{"name":"decreased DNA content during vegetative growth","type":"exact"},{"name":"decreased DNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0000453"}


id: GO:0009514
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized form of peroxisome that contains the enzymes of the glyoxylate pathway. The glyoxysome is found in some plant cells, notably the cells of germinating seeds.","definition_xrefs":["GOC:dhl","ISBN:0140514031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005777"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005777"],"is_obsolete":false,"name":"glyoxysome","secondary_identifiers":["Wikipedia:Glyoxysome"],"termid":"GO:0009514"}


id: PBO:0061152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMNAT1 pseudogene 4","termid":"PBO:0061152"}


id: GO:0075079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of receptor-mediated signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont receptor-mediated signal transduction (obsolete GO:0075079)","termid":"GO:0075079"}


id: PBO:0064668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 3","termid":"PBO:0064668"}


id: PR:Q96WV9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdk9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q96WV9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent kinase 9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.10","synonyms":[{"name":"Spom972h-cdk9","type":"exact"},{"name":"cell division protein kinase 9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q96WV9"}


id: GO:0000800
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A proteinaceous core found between sister chromatids during meiotic prophase.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"synaptonemal complex","termid":"GO:0000795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"lateral element","synonyms":[{"name":"axial element","type":"exact"}],"termid":"GO:0000800"}


id: PBO:0030365
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multinucleate_multiseptate_vegetative_cell,_septa_grouped","termid":"PBO:0030365"}


id: SO:0000129
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is silenced by DNA methylation.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"silenced_by_DNA_methylation","termid":"SO:0000895"},{"relation_name":"is_a","term_name":"gene_silenced_by_DNA_modification","termid":"SO:0000128"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_silenced_by_DNA_methylation","synonyms":[{"name":"gene silenced by DNA methylation","type":"exact"},{"name":"methylation-silenced gene","type":"exact"}],"termid":"SO:0000129"}


id: FYPO:0006374
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein processing is abnormal. Protein processing is the cleavage of one or more bonds within a protein that leads to the formation of mature, fully functional protein.","definition_xrefs":["GO:0030163","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal proteolysis","termid":"FYPO:0005376"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein processing","synonyms":[{"name":"abnormal protein cleavage","type":"related"},{"name":"abnormal protein maturation by peptide bond cleavage","type":"exact"},{"name":"abnormal protein maturation by peptide bond hydrolysis","type":"exact"}],"termid":"FYPO:0006374"}


id: PR:C6Y4C8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vma21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4C8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar ATPase assembly integral membrane protein vma21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.16","synonyms":[{"name":"Spom972h-vma21","type":"exact"}],"termid":"PR:C6Y4C8"}


id: PR:Q9UTJ4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cgr1 gene.","definition_xrefs":["UniProtKB:Q9UTJ4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA-processing protein cgr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1556.05c","synonyms":[{"name":"Spom972h-cgr1","type":"exact"}],"termid":"PR:Q9UTJ4"}


id: PBO:0070741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 11","termid":"PBO:0070741"}


id: PBO:0054234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1616","termid":"PBO:0054234"}


id: PBO:0084471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Master regulator that regulates transcript levels of the FLP1 gene; acts in concert with Rep1p to regulate transcript levels of the FLP1 gene that promotes plasmid copy amplification and 2-micron plasmid-inheritance; also autoregulates levels of its own transcript; required for Rep1p stability; both Rep1p and Rep2p are sumoylated which is important for function","termid":"PBO:0084471"}


id: PR:Q10163
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- smb1 gene.","definition_xrefs":["UniProtKB:Q10163","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein-associated protein B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.08","synonyms":[{"name":"Sm protein B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Sm-B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SmB (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-smb1","type":"exact"},{"name":"snRNP-B (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10163"}


id: GO:0021887
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a hypothalamus neuron that releases gonadotrophin-releasing hormone.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:jid","GOC:dgh","PMID:12626695","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"hypothalamus gonadotrophin-releasing hormone neuron differentiation","termid":"GO:0021886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hypothalamus gonadotrophin-releasing hormone neuron fate commitment","synonyms":[{"name":"hypothalamus gonadotropin-releasing hormone neuron fate commitment","type":"related"}],"termid":"GO:0021887"}


id: PBO:0090248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf GAP, GTPase-activating protein Spa2","termid":"PBO:0090248"}


id: PBO:0085364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoribosylanthranilate isomerase; catalyzes the third step in tryptophan biosynthesis; in 2004, the sequence of TRP1 from strain S228C was updated by changing the previously annotated internal STOP (TAA) to serine (TCA); enhances vegetative growth at low and high temperatures when used as an auxotrophic marker in strains such as W303","termid":"PBO:0085364"}


id: PBO:0089489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folliculin, BFC/FNIP-Folliculin complex subunit Bhd1","termid":"PBO:0089489"}


id: PBO:0084494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein involved in meiotic recombination; involved in DMC1-dependent meiotic recombination; forms heterodimer with Mei5p; proposed to be an assembly factor for Dmc1p","termid":"PBO:0084494"}


id: GO:1903017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of exo-alpha-sialidase activity.","definition_xrefs":["PMID:23544079","GOC:BHF","GOC:rl","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"},{"relation_name":"is_a","term_name":"regulation of exo-alpha-sialidase activity","termid":"GO:1903015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of exo-alpha-sialidase activity","synonyms":[{"name":"activation of N-acylneuraminate glycohydrolase activity","type":"narrow"},{"name":"activation of acetylneuraminidase activity","type":"narrow"},{"name":"activation of acetylneuraminyl hydrolase activity","type":"narrow"},{"name":"activation of alpha-neuraminidase activity","type":"narrow"},{"name":"activation of exo-alpha-sialidase activity","type":"narrow"},{"name":"activation of neuraminidase activity","type":"narrow"},{"name":"activation of sialidase activity","type":"narrow"},{"name":"positive regulation of N-acylneuraminate glycohydrolase activity","type":"exact"},{"name":"positive regulation of acetylneuraminidase activity","type":"exact"},{"name":"positive regulation of acetylneuraminyl hydrolase activity","type":"exact"},{"name":"positive regulation of alpha-neuraminidase activity","type":"exact"},{"name":"positive regulation of neuraminidase activity","type":"exact"},{"name":"positive regulation of sialidase activity","type":"exact"},{"name":"up regulation of N-acylneuraminate glycohydrolase activity","type":"exact"},{"name":"up regulation of acetylneuraminidase activity","type":"exact"},{"name":"up regulation of acetylneuraminyl hydrolase activity","type":"exact"},{"name":"up regulation of alpha-neuraminidase activity","type":"exact"},{"name":"up regulation of exo-alpha-sialidase activity","type":"exact"},{"name":"up regulation of neuraminidase activity","type":"exact"},{"name":"up regulation of sialidase activity","type":"exact"},{"name":"up-regulation of N-acylneuraminate glycohydrolase activity","type":"exact"},{"name":"up-regulation of acetylneuraminidase activity","type":"exact"},{"name":"up-regulation of acetylneuraminyl hydrolase activity","type":"exact"},{"name":"up-regulation of alpha-neuraminidase activity","type":"exact"},{"name":"up-regulation of exo-alpha-sialidase activity","type":"exact"},{"name":"up-regulation of neuraminidase activity","type":"exact"},{"name":"up-regulation of sialidase activity","type":"exact"},{"name":"upregulation of N-acylneuraminate glycohydrolase activity","type":"exact"},{"name":"upregulation of acetylneuraminidase activity","type":"exact"},{"name":"upregulation of acetylneuraminyl hydrolase activity","type":"exact"},{"name":"upregulation of alpha-neuraminidase activity","type":"exact"},{"name":"upregulation of exo-alpha-sialidase activity","type":"exact"},{"name":"upregulation of neuraminidase activity","type":"exact"},{"name":"upregulation of sialidase activity","type":"exact"}],"termid":"GO:1903017"}


id: PBO:0089484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, MADS-box Mbx1","termid":"PBO:0089484"}


id: GO:0060320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The recognition and rejection of self pollen by cells in the stigma, mediated by the sharing and interaction of the single locus incompatibility haplotypes.","definition_xrefs":["PMID:34848142","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recognition of pollen","termid":"GO:0048544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rejection of self pollen","synonyms":[{"name":"self-incompatibility","type":"related"}],"termid":"GO:0060320"}


id: PBO:0074172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 36 member 3","termid":"PBO:0074172"}


id: PBO:0085063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential subunit of Sec63 complex; with Sec61 complex, Kar2p/BiP and Lhs1p forms a channel competent for SRP-dependent and post-translational SRP-independent protein targeting and translocation into the ER; other members are Sec63p, Sec62p, and Sec66p","termid":"PBO:0085063"}


id: PBO:0028207
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_punctate_nuclear_protein_localization_during_cellular_response_to_ionizing_radiation","termid":"PBO:0028207"}


id: GO:0075158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont G protein-coupled receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G protein-coupled receptor signaling pathway in response to host (obsolete GO:0075158)","synonyms":[{"name":"negative regulation of G-protein coupled receptor protein signaling pathway in response to host","type":"exact"},{"name":"negative regulation of G-protein coupled receptor protein signalling pathway in response to host","type":"exact"},{"name":"negative regulation of symbiont G-protein coupled receptor protein-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075158"}


id: MOD:00448
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an N-acetylaminoglucose group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminoglucosylated","termid":"MOD:00733"},{"relation_name":"is_a","term_name":"N-acetylaminohexosylated residue","termid":"MOD:01673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N-acetylaminoglucosylated residue","synonyms":[{"name":"GlcNAcRes","type":"exact"},{"name":"HexNAc","type":"related"}],"termid":"MOD:00448"}


id: PATO:0001087
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001087 relative efficiency value (obsolete PATO:0001087)","termid":"PATO:0001087"}


id: GO:0009027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tartrate + NAD+ = oxaloglycolate + NADH + H+.","definition_xrefs":["EC:1.1.1.93"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"tartrate dehydrogenase activity","secondary_identifiers":["RHEA:15209","MetaCyc:TARTRATE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"mesotartrate dehydrogenase activity","type":"related"},{"name":"tartrate:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0009027"}


id: PBO:0086330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with WD-40 repeats involved in rRNA processing; associates with rDNA chromatin in H4-tail-dependent manner; associates with trans-acting ribosome biogenesis factors; similar to beta-transducin superfamily","termid":"PBO:0086330"}


id: PBO:0054413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1809","termid":"PBO:0054413"}


id: PBO:0064328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLS1 pseudogene 1","termid":"PBO:0064328"}


id: FYPO:0002644
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine residues in one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein serine phosphorylation during vegetative growth (obsolete FYPO:0002644)","synonyms":[{"name":"decreased peptidyl-serine phosphorylation during vegetative growth","type":"exact"},{"name":"decreased protein serine phosphorylation during mitotic cell cycle","type":"related"},{"name":"decreased serine phosphorylation during vegetative growth","type":"exact"},{"name":"reduced protein serine phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002644"}


id: GO:0061860
data:
  {"annotated_genes":["SJAG_01010","SJAG_00729","SJAG_00272","SJAG_02182","SJAG_04150"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85646,90030,91335,108342,108898],"is_not":false,"summary":null,"term":"GO:0061860"}]},"cv_name":"molecular_function","definition":"Facilitating the opening of the ring structure of the PCNA complex, or any of the related sliding clamp complexes, and their removal from the DNA duplex, driven by ATP hydrolysis.","definition_xrefs":["GOC:vw","PMID:23499004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on DNA","termid":"GO:0008094"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_01010":null,"SJAG_02182":null,"SJAG_04150":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"DNA clamp unloader activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA clamp unloading activity","type":"exact"}],"termid":"GO:0061860","terms_by_termid":{"GO:0061860":null}}


id: PBO:0113029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of DNA polymerase zeta (pol zeta); involved in translesion synthesis during post-replication repair; required for mutagenesis induced by DNA damage; involved in double-strand break repair; may be involved in meiosis; forms a complex with Rev7p, Pol31p and Pol32p","termid":"PBO:0113029"}


id: PBO:0005778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle subunit Sec65 (predicted)","termid":"PBO:0005778"}


id: PBO:0091042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT III complex subunit Cmp7","termid":"PBO:0091042"}


id: PBO:0070960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 15","termid":"PBO:0070960"}


id: GO:0031317
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex consisting of two membrane proteins and one extracytoplasmic solute receptor. Such transporters transport a variety of substrates without direct ATP power, instead using energy from ion gradients.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"tripartite ATP-independent periplasmic transporter complex","synonyms":[{"name":"TRAP transporter complex","type":"exact"},{"name":"TRAP-T transporter complex","type":"exact"}],"termid":"GO:0031317"}


id: PBO:0064978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 34, pseudogene","termid":"PBO:0064978"}


id: PATO:0000931
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000931 blue light sensitivity (obsolete PATO:0000931)","termid":"PATO:0000931"}


id: PBO:0090155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L15","termid":"PBO:0090155"}


id: GO:0030395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lactose, a disaccharide of glucose and galactose, the carbohydrate of milk.","definition_xrefs":["GOC:jl","ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide binding","termid":"GO:0048030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"lactose binding","termid":"GO:0030395"}


id: GO:0019323
data:
  {"annotated_genes":["SJAG_02010","SJAG_03174","SJAG_04276","SJAG_03958","SJAG_04660"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91814,97239,91077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019568"},{"annotations":[100415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019303"},{"annotations":[97240,91079,91815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042843"},{"annotations":[115090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005998"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a pentose, any monosaccharide with a chain of five carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose metabolic process","termid":"GO:0019321"},{"relation_name":"is_a","term_name":"monosaccharide catabolic process","termid":"GO:0046365"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02010":null,"SJAG_03174":null,"SJAG_03958":null,"SJAG_04276":null,"SJAG_04660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"pentose catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pentose breakdown","type":"exact"},{"name":"pentose catabolism","type":"exact"},{"name":"pentose degradation","type":"exact"}],"termid":"GO:0019323","terms_by_termid":{"GO:0005998":null,"GO:0019303":null,"GO:0019568":null,"GO:0042843":null}}


id: GO:0098682
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An electron dense structure that anchors a synaptic ribbon to the presynaptic membrane.","definition_xrefs":["PMID:15626493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"ribbon synapse","termid":"GO:0097470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"arciform density","termid":"GO:0098682"}


id: GO:0097485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of a neuron projection is directed to a specific target site in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:rl","PMID:22790009","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"},{"relation_name":"part_of","term_name":"neuron projection morphogenesis","termid":"GO:0048812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection guidance","synonyms":[{"name":"neurite guidance","type":"narrow"},{"name":"neuron process guidance","type":"exact"},{"name":"neuron protrusion guidance","type":"exact"},{"name":"neuronal cell projection guidance","type":"exact"}],"termid":"GO:0097485"}


id: PBO:0053771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1016","termid":"PBO:0053771"}


id: PBO:0053834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1099","termid":"PBO:0053834"}


id: MOD:01906
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to dehydromethionine.","definition_xrefs":["PubMed:19775156","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclized residue","termid":"MOD:00601"},{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydromethionine","synonyms":[{"name":"(3S)-3-carboxy-1-methylisothiazolidin-1-ium","type":"exact"},{"name":"L-dehydromethionine","type":"exact"}],"termid":"MOD:01906"}


id: PBO:0078029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 19 (non-functional)","termid":"PBO:0078029"}


id: SO:0000187
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A group of characterized repeat sequences.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000187 repeat_family (obsolete SO:0000187)","termid":"SO:0000187"}


id: GO:0070613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein processing, a protein maturation process achieved by the cleavage of a peptide bond or bonds within a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteolysis","termid":"GO:0030162"},{"relation_name":"is_a","term_name":"regulation of protein maturation","termid":"GO:1903317"},{"relation_name":"regulates","term_name":"protein processing","termid":"GO:0016485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of protein processing","secondary_identifiers":["GO:0010953"],"synonyms":[{"name":"regulation of protein maturation by peptide bond cleavage","type":"exact"}],"termid":"GO:0070613"}


id: GO:0010372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of gibberellins.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gibberellin biosynthetic process","termid":"GO:0010371"},{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of isoprenoid metabolic process","termid":"GO:0045828"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"gibberellin biosynthetic process","termid":"GO:0009686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of gibberellin biosynthetic process","synonyms":[{"name":"positive regulation of gibberellic acid biosynthetic process","type":"narrow"}],"termid":"GO:0010372"}


id: PBO:0082693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the INO80 chromatiin remodeling complex; target of the Mec1p/Tel1p DNA damage signaling pathway; proposed to link chromatin remodeling to replication checkpoint responses","termid":"PBO:0082693"}


id: GO:0032580
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the thin, flattened compartments that form the central portion of the Golgi complex.","definition_xrefs":["GOC:mah","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane","termid":"GO:0031090"},{"relation_name":"part_of","term_name":"Golgi cisterna","termid":"GO:0031985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0005794","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Golgi cisterna membrane","synonyms":[{"name":"Golgi apparatus cisterna membrane","type":"exact"},{"name":"Golgi stack membrane","type":"exact"}],"termid":"GO:0032580"}


id: GO:0061558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a cranial ganglion to attain its fully functional state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ganglion maturation","termid":"GO:0061553"},{"relation_name":"part_of","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"cranial ganglion development","termid":"GO:0061550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial ganglion maturation","synonyms":[{"name":"cranial ganglia maturation","type":"related"}],"termid":"GO:0061558"}


id: GO:0036336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a dendritic cell within or between different tissues and organs of the body.","definition_xrefs":["CL:0000451","GOC:nhn","PMID:19339990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononuclear cell migration","termid":"GO:0071674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic cell migration","termid":"GO:0036336"}


id: PBO:0027166
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_premeiotic_DNA_replication_initiation_resulting_in_complete_rereplication","termid":"PBO:0027166"}


id: PBO:0000283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Pfs2","termid":"PBO:0000283"}


id: PBO:0027053
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_vegetative_cell_with_long_curved_microtubules","termid":"PBO:0027053"}


