# terms

id: PBO:0030176
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_aseptate_cell","termid":"PBO:0030176"}


id: GO:0003412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of the apicobasal polarity of an epithelial cell that contributes to the shaping of a camera-type eye.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of epithelial cell apical/basal polarity","termid":"GO:0045198"},{"relation_name":"part_of","term_name":"camera-type eye morphogenesis","termid":"GO:0048593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of epithelial cell apical/basal polarity involved in camera-type eye morphogenesis","termid":"GO:0003412"}


id: GO:0006655
data:
  {"annotated_genes":["SJAG_00168","SJAG_03563","SJAG_04317","SJAG_03700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89087,102252,109085,113923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032049"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phosphatidylglycerols, any of a class of phospholipids in which the phosphatidyl group is esterified to the hydroxyl group of glycerol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylglycerol metabolic process","termid":"GO:0046471"},{"relation_name":"is_a","term_name":"glycerophospholipid biosynthetic process","termid":"GO:0046474"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00168":null,"SJAG_03563":null,"SJAG_03700":null,"SJAG_04317":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylglycerol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylglycerol anabolism","type":"exact"},{"name":"phosphatidylglycerol biosynthesis","type":"exact"},{"name":"phosphatidylglycerol formation","type":"exact"},{"name":"phosphatidylglycerol synthesis","type":"exact"}],"termid":"GO:0006655","terms_by_termid":{"GO:0032049":null}}


id: GO:0042473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the outer ear are generated and organized. The outer ear is the part of the ear external to the tympanum (eardrum). It consists of a tube (the external auditory meatus) that directs sound waves on to the tympanum, and may also include the external pinna, which extends beyond the skull.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"ear morphogenesis","termid":"GO:0042471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"outer ear morphogenesis","termid":"GO:0042473"}


id: GO:0004711
data:
  {"annotated_genes":["SJAG_01047"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113208],"is_not":false,"summary":null,"term":"GO:0004711"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ribosomal protein S6 + ATP = ribosomal protein S6 phosphate + ATP.","definition_xrefs":["PMID:9822608","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01047":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0004672","GO:0140096","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"ribosomal protein S6 kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0004711","terms_by_termid":{"GO:0004711":null}}


id: SO:0000148
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"One or more contigs that have been ordered and oriented using end-read information. Contains gaps that are filled with N's.","definition_xrefs":["SO:ls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial_genomic_sequence_assembly","termid":"SO:0001876"},{"relation_name":"part_of","term_name":"ultracontig","termid":"SO:0000719"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supercontig","synonyms":[{"name":"scaffold","type":"related"}],"termid":"SO:0000148"}


id: GO:0007566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Attachment of the blastocyst to the uterine lining.","definition_xrefs":["PMID:10882512","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process","termid":"GO:0022414"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"},{"relation_name":"part_of","term_name":"female pregnancy","termid":"GO:0007565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryo implantation","synonyms":[{"name":"blastocyst implantation","type":"exact"}],"termid":"GO:0007566"}


id: GO:0043607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of formamide, the simplest amide, HCONH2, derived from formic acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"formamide metabolic process","termid":"GO:0043606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formamide biosynthetic process","termid":"GO:0043607"}


id: PR:Q9HDT7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCP20C8.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDT7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0321 protein P20C8.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP20C8.02c","synonyms":[{"name":"Spom972h-SPCP20C8.02c","type":"exact"}],"termid":"PR:Q9HDT7"}


id: SO:0001238
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The tanscription start site that is most frequently used for transcription of a gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"TSS","termid":"SO:0000315"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major_TSS","synonyms":[{"name":"major TSS","type":"exact"},{"name":"major transcription start site","type":"exact"}],"termid":"SO:0001238"}


id: PBO:0056715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"menin 1","termid":"PBO:0056715"}


id: PBO:0064676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 11","termid":"PBO:0064676"}


id: PBO:0029880
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_binding","termid":"PBO:0029880"}


id: GO:0103066
data:
  {"annotated_genes":["SJAG_02855"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106138],"is_not":false,"summary":null,"term":"GO:0103066"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4alpha-carboxy-4beta-methyl-5alpha-cholesta-8-en-3beta-ol + NAD(P) = 4alpha-methyl-5alpha-cholesta-8-en-3-one + carbon dioxide + NAD(P)H.","definition_xrefs":["EC:1.1.1.170","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4alpha-carboxy-4beta-methyl-5alpha-cholesta-8-en-3beta-ol:NAD(P)+ 3-oxidoreductase (decarboxylating) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN66-18"],"termid":"GO:0103066","terms_by_termid":{"GO:0103066":null}}


id: PBO:0039842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP11A divergent transcript","termid":"PBO:0039842"}


id: PBO:0040817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICRA antisense RNA 2","termid":"PBO:0040817"}


id: FYPO:0001208
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"substance absent from cell","termid":"FYPO:0001888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"substance absent from cell during vegetative growth","synonyms":[{"name":"substance absent from cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001208"}


id: GO:0016438
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-alpha-D-mannose + queuosine34 in tRNA(Asp) = GDP + H+ + O-4''-alpha-D-mannosylqueuosine34 in tRNA(Asp).","definition_xrefs":["RHEA:12885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824","GO:0140098","GO:0140101"],"is_obsolete":false,"name":"tRNA-queuosine(34) beta-mannosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.110-RXN","EC:2.4.1.110"],"synonyms":[{"name":"GDP-mannose:tRNAAsp-queuosine O-5''-beta-D-mannosyltransferase activity","type":"related"},{"name":"tRNA-queuosine beta-mannosyltransferase activity","type":"broad"}],"termid":"GO:0016438"}


id: PBO:0067684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal 1","termid":"PBO:0067684"}


id: PBO:0038762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3B pseudogene 7","termid":"PBO:0038762"}


id: GO:0002683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an immune system process.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"negatively_regulates","term_name":"immune system process","termid":"GO:0002376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of immune system process","synonyms":[{"name":"down regulation of immune system process","type":"exact"},{"name":"down-regulation of immune system process","type":"exact"},{"name":"downregulation of immune system process","type":"exact"},{"name":"inhibition of immune system process","type":"narrow"}],"termid":"GO:0002683"}


id: GO:0018165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The uridylylation of peptidyl-tyrosine to form peptidyl-O4'-(phospho-5'-uridine)-L-tyrosine, found in glutamine synthetase.","definition_xrefs":["RESID:AA0256"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-tyrosine uridylylation (obsolete GO:0018165)","termid":"GO:0018165"}


id: PBO:0038993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylosuccinate synthase 2","termid":"PBO:0038993"}


id: FYPO:0004839
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in which the localization of a protein to the plasma membrane is abolished when the cell is subject to glucose starvation, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"},{"relation_name":"is_a","term_name":"abnormal protein localization to plasma membrane","termid":"FYPO:0004838"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm","termid":"FYPO:0004842"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to plasma membrane, with protein mislocalized to cytoplasm, during glucose starvation","synonyms":[{"name":"abolished protein localisation to plasma membrane, with protein mislocalised to cytoplasm, during glucose starvation","type":"exact"},{"name":"abolished protein localization in plasma membrane, with protein mislocalized to cytoplasm, during glucose starvation","type":"exact"},{"name":"abolished protein localization to cell membrane, with protein mislocalized to cytoplasm, during glucose starvation","type":"exact"},{"name":"abolished protein localization to plasma membrane, with protein mislocalized to cytoplasm, during glucose depletion","type":"exact"},{"name":"abolished protein localization to plasma membrane, with protein mislocalized to cytoplasm, during glucose deprivation","type":"exact"},{"name":"abolished protein localization to plasma membrane, with protein mislocalized to cytoplasm, during glucose limitation","type":"related"},{"name":"protein localization to plasma membrane abolished, with protein mislocalized to cytoplasm, during glucose starvation","type":"exact"}],"termid":"FYPO:0004839"}


id: PBO:0017449
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-parasite_of","termid":"PBO:0017449"}


id: FYPO:0006100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cytoplasm is decreased, and some of the protein is present in the nucleus instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"},{"relation_name":"is_a","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"},{"relation_name":"is_a","term_name":"decreased protein localization to cytoplasm","termid":"FYPO:0006099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to cytoplasm, with protein mislocalized to nucleus","synonyms":[{"name":"decreased protein localisation to cytoplasm, with protein mislocalised to nucleus","type":"exact"},{"name":"decreased protein localization in cytoplasm, with protein mislocalized to nucleus","type":"exact"},{"name":"decreased protein localization to cytoplasm, with protein mislocalized to nucleus, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cytoplasm, with protein mislocalized to nucleus, during vegetative growth","type":"exact"},{"name":"reduced protein localization to cytoplasm, with protein mislocalized to nucleus","type":"exact"}],"termid":"FYPO:0006100"}


id: GO:1905282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epidermal growth factor receptor signaling pathway involved in heart process.","definition_xrefs":["GOC:BHF","GO_REF:0000058","GOC:BHF_miRNA","GOC:bc","GOC:TermGenie","PMID:23069713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epidermal growth factor receptor signaling pathway","termid":"GO:0042058"},{"relation_name":"regulates","term_name":"epidermal growth factor receptor signaling pathway involved in heart process","termid":"GO:1905251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of epidermal growth factor receptor signaling pathway involved in heart process","synonyms":[{"name":"regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"regulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"regulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"regulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"regulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"}],"termid":"GO:1905282"}


id: MOD:00272
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-threonine residue and 5'-phosphoadenosine through a phosphodiester bond to form O-(phospho-5'-adenosine)-L-threonine.","definition_xrefs":["PubMed:8917428","PubMed:2989287","RESID:AA0267","Unimod:405#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"adenylated residue","termid":"MOD:01165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(phospho-5'-adenosine)-L-threonine","synonyms":[{"name":"(2S,3R)-2-amino-3-(5'-adenosine phosphonoxy)butanoic acid","type":"exact"},{"name":"5'-adenylic-O3-L-threonine","type":"exact"},{"name":"ACT_SITE O-AMP-threonine intermediate","type":"exact"},{"name":"AMP binding site","type":"related"},{"name":"L-threonine monoanhydride with 5'-adenylic acid","type":"exact"},{"name":"MOD_RES O-AMP-threonine","type":"exact"},{"name":"O(gamma)-5'-adenylic-L-threonine","type":"exact"},{"name":"O-(phospho-5'-adenosine)-L-threonine","type":"exact"},{"name":"O3-(phospho-5'-adenosine)-L-threonine","type":"exact"},{"name":"O3-L-threonine 5'-adenosine phosphodiester","type":"exact"},{"name":"Phosphoadenosine","type":"related"},{"name":"beta-5'-adenylic-L-threonine","type":"exact"}],"termid":"MOD:00272"}


id: GO:0007338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The union of male and female gametes to form a zygote.","definition_xrefs":["GOC:ems","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fertilization","termid":"GO:0009566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"single fertilization","synonyms":[{"name":"zygote biosynthesis","type":"related"},{"name":"zygote formation","type":"related"}],"termid":"GO:0007338"}


id: PBO:0004739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin Grx4","termid":"PBO:0004739"}


id: MOD:01562
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ8plex-117 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-117 reporter+balance reagent acylated residue","termid":"MOD:01556"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-117 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01562"}


id: PATO:0001124
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001124 pressure value (obsolete PATO:0001124)","termid":"PATO:0001124"}


id: GO:0033717
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-gluconate + acceptor = 2-dehydro-D-gluconate + reduced acceptor.","definition_xrefs":["RHEA:12769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gluconate dehydrogenase activity","termid":"GO:0008875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"gluconate 2-dehydrogenase (acceptor) activity","secondary_identifiers":["MetaCyc:GLUCONATE-2-DEHYDROGENASE-RXN","EC:1.1.99.3"],"synonyms":[{"name":"2-ketogluconate reductase activity","type":"broad"},{"name":"D-gluconate dehydrogenase activity","type":"related"},{"name":"D-gluconate dehydrogenase, 2-keto-D-gluconate-yielding activity","type":"related"},{"name":"D-gluconate:(acceptor) 2-oxidoreductase activity","type":"related"},{"name":"D-gluconate:acceptor 2-oxidoreductase activity","type":"related"},{"name":"gluconate oxidase activity","type":"related"},{"name":"gluconic acid dehydrogenase activity","type":"related"},{"name":"gluconic dehydrogenase activity","type":"related"}],"termid":"GO:0033717"}


id: PBO:0063126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(ADP-ribose) polymerase family member 11","termid":"PBO:0063126"}


id: SO:0001382
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_isopentenylaminomethyl_2prime_O_methyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_isopentenylaminomethyl_two_prime_O_methyluridine","secondary_identifiers":["RNAMOD:105"],"synonyms":[{"name":"5-(isopentenylaminomethyl)- 2'-O-methyluridine","type":"exact"},{"name":"five isopentenylaminomethyl two prime O methyluridine","type":"exact"},{"name":"inm5Um","type":"exact"}],"termid":"SO:0001382"}


id: GO:0050272
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-chloro-L-alanine + thioglycolate = S-carboxymethyl-L-cysteine + chloride + H+.","definition_xrefs":["EC:4.5.1.5","RHEA:22868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-halide lyase activity","termid":"GO:0016848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"S-carboxymethylcysteine synthase activity","secondary_identifiers":["KEGG_REACTION:R04003","MetaCyc:S-CARBOXYMETHYLCYSTEINE-SYNTHASE-RXN"],"synonyms":[{"name":"3-chloro-L-alanine chloride-lyase (adding thioglycolate)","type":"related"},{"name":"3-chloro-L-alanine chloride-lyase (adding thioglycolate; S-carboxymethyl-L-cysteine-forming)","type":"related"},{"name":"S-carboxymethyl-L-cysteine synthase activity","type":"related"}],"termid":"GO:0050272"}


id: PBO:0081392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 232","termid":"PBO:0081392"}


id: GO:0000801
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structural unit of the synaptonemal complex found between the lateral elements.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"synaptonemal complex","termid":"GO:0000795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005694","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"central element","termid":"GO:0000801"}


id: GO:0090045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of deacetylase activity, the catalysis of the hydrolysis of an acetyl group or groups from a substrate molecule.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"},{"relation_name":"is_a","term_name":"regulation of deacetylase activity","termid":"GO:0150065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of deacetylase activity","termid":"GO:0090045"}


id: SO:0000000
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000000 Sequence_Ontology (obsolete SO:0000000)","termid":"SO:0000000"}


id: FYPO:0002512
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the palmitoylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein palmitoylation","termid":"FYPO:0002505"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation during meiosis","termid":"FYPO:0002514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein palmitoylation during meiosis","synonyms":[{"name":"decreased protein palmitoylation during meiotic nuclear division","type":"exact"},{"name":"reduced protein palmitoylation during meiosis","type":"exact"}],"termid":"FYPO:0002512"}


id: PBO:0059284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L41","termid":"PBO:0059284"}


id: GO:2000580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ATP-dependent microtubule motor activity, plus-end-directed.","definition_xrefs":["GOC:vw","GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of microtubule motor activity, plus-end-directed (obsolete GO:2000580)","synonyms":[{"name":"regulation of ATP-dependent microtubule motor activity, plus-end-directed","type":"exact"},{"name":"regulation of kinesin ATP phosphohydrolase (plus-end-directed)","type":"exact"},{"name":"regulation of kinesin activity","type":"related"},{"name":"regulation of plus-end-directed kinesin ATPase activity","type":"exact"},{"name":"regulation of plus-end-directed microtubule motor activity","type":"broad"}],"termid":"GO:2000580"}


id: PBO:0056472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine adenosyltransferase 2A","termid":"PBO:0056472"}


id: PBO:0109039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFT57 pseudogene 1","termid":"PBO:0109039"}


id: PBO:0071717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 15","termid":"PBO:0071717"}


id: FYPO:0003006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to caffeine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to caffeine","synonyms":[{"name":"decreased protein phosphorylation during cellular response to caffeine during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to caffeine during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to caffeine","type":"exact"}],"termid":"FYPO:0003006"}


id: PATO:0000562
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000562 mass value (obsolete PATO:0000562)","termid":"PATO:0000562"}


id: SO:0001740
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene with a translational start codon of CUG.","definition_xrefs":["SO:mc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_with_non_canonical_start_codon","termid":"SO:0001739"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_start_codon_CUG","synonyms":[{"name":"gene with start codon CUG","type":"exact"}],"termid":"SO:0001740"}


id: PBO:0089460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex platform subcomplex scaffold WD repeat subunit Apc4/Cut20","termid":"PBO:0089460"}


id: PBO:0082157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adaptor protein that links actin to clathrin and endocytosis; involved in membrane cytoskeleton assembly and cell polarization; present in the actin cortical patch of the emerging bud tip; dimer in vivo","termid":"PBO:0082157"}


id: PBO:0071548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 13","termid":"PBO:0071548"}


id: PBO:0083856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATP synthase subunit c (ATPase-associated proteolipid); encoded on the mitochondrial genome; mutation confers oligomycin resistance; expression is specifically dependent on the nuclear genes AEP1 and AEP2","termid":"PBO:0083856"}


id: GO:0110096
data:
  {"annotated_genes":["SJAG_01457","SJAG_05256","SJAG_02010","SJAG_02960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108793],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110095"},{"annotations":[101089],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140041"},{"annotations":[99543,91597],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0046294"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an aldehyde stimulus.","definition_xrefs":["PMID:25656103","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01457":null,"SJAG_02010":null,"SJAG_02960":null,"SJAG_05256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to aldehyde","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110096","terms_by_termid":{"GO:0046294":null,"GO:0110095":null,"GO:0140041":null}}


id: PBO:0078274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 9-2","termid":"PBO:0078274"}


id: GO:1902891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of root hair elongation.","definition_xrefs":["GOC:TermGenie","PMID:22329353","GOC:als","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell growth","termid":"GO:0030308"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of root hair elongation","termid":"GO:1902890"},{"relation_name":"is_a","term_name":"negative regulation of cell maturation","termid":"GO:1903430"},{"relation_name":"negatively_regulates","term_name":"root hair elongation","termid":"GO:0048767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of root hair elongation","synonyms":[{"name":"down regulation of root hair elongation","type":"exact"},{"name":"down-regulation of root hair elongation","type":"exact"},{"name":"downregulation of root hair elongation","type":"exact"},{"name":"inhibition of root hair elongation","type":"narrow"}],"termid":"GO:1902891"}


id: GO:0018655
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-oxo-delta3-4,5,5-trimethylcyclopentenylacetyl-CoA + NADH + H+ + O2 = NAD+ + H2O + delta2,5-3,4,4-trimethylpimelyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0430"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-oxo-delta3-4,5,5-trimethylcyclopentenylacetyl-CoA 1,2-monooxygenase activity (obsolete GO:0018655)","termid":"GO:0018655"}


id: FYPO:0002006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of iron ions measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular iron level","synonyms":[{"name":"increased cellular iron ion level","type":"exact"},{"name":"increased cellular iron level during mitotic cell cycle","type":"related"},{"name":"increased cellular iron level during vegetative growth","type":"exact"},{"name":"increased iron accumulation","type":"related"}],"termid":"FYPO:0002006"}


id: PBO:0046120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E binding protein 3","termid":"PBO:0046120"}


id: PBO:0074227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 46 member 1","termid":"PBO:0074227"}


id: PBO:0087944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation initiation factor eIF1; component of complex involved in recognition of initiator codon; modulates translation accuracy at initiation phase by discriminating against suboptimal initiation sites to prevent excessive uORF translation genome-wide","termid":"PBO:0087944"}


id: GO:0051368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The octanoylation of peptidyl-threonine to form peptidyl-O3-octanoyl-L-threonine, typical of the protein ghrelin.","definition_xrefs":["PMID:11546772","GOC:jsg","RESID:AA0387"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-threonine octanoylation (obsolete GO:0051368)","termid":"GO:0051368"}


id: PBO:0059376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 1","termid":"PBO:0059376"}


id: GO:0120341
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The short portion of the radial spoke 2 (RS2) that is directly anchored to the A microtubule of an axonemal microtubule doublet.","definition_xrefs":["GOC:krc","PMID:22754630","PMID:25694453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radial spoke base","termid":"GO:0120339"},{"relation_name":"part_of","term_name":"radial spoke 2","termid":"GO:0120334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"radial spoke base 2","termid":"GO:0120341"}


id: PR:O74947
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC553.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74947"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C553.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.10","synonyms":[{"name":"Spom972h-SPCC553.10","type":"exact"}],"termid":"PR:O74947"}


id: PBO:0084733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inorganic pyrophosphatase; required for mitochondrial function and possibly involved in energy generation from inorganic pyrophosphate; human ortholog, PPA2, functionally complements the null mutant; mutations in human PPA2 cause a mitochondrial disease resulting in sudden unexpected cardiac arrest in infants","termid":"PBO:0084733"}


id: RO:0002345
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"transports","termid":"RO:0002020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exports","termid":"RO:0002345"}


id: PBO:0075210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntrophin alpha 1","termid":"PBO:0075210"}


id: PBO:0031501
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_fatty_acid_synthase_activity","termid":"PBO:0031501"}


id: GO:2000697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of epithelial cell differentiation involved in kidney development.","definition_xrefs":["GOC:yaf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000696"},{"relation_name":"negatively_regulates","term_name":"epithelial cell differentiation involved in kidney development","termid":"GO:0035850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000697"}


id: FYPO:0001479
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alpha,alpha-trehalase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"abnormal alpha,alpha-trehalase activity","synonyms":[{"name":"abnormal neutral trehalase activity","type":"exact"},{"name":"abnormal trehalase activity","type":"broad"}],"termid":"FYPO:0001479"}


id: GO:0060188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein desumoylation. Protein desumoylation is the process in which a SUMO protein (small ubiquitin-related modifier) is cleaved from its target protein.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification by small protein conjugation or removal","termid":"GO:1903320"},{"relation_name":"regulates","term_name":"protein desumoylation","termid":"GO:0016926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"regulation of protein desumoylation","termid":"GO:0060188"}


id: GO:0160166
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoadipate + H+ + N(6)-[(R)-lipoyl]-L-lysyl-[dihydrolipoyllysine-residue succinyltransferase] = CO2 + N(6)-[(R)-S(8)-glutaryldihydrolipoyl]-L-lysyl-[dihydrolipoyllysine-residue succinyltransferase].","definition_xrefs":["PMID:29191460","PMID:32695416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor","termid":"GO:0016624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"2-oxoadipate dehydrogenase activity","secondary_identifiers":["RHEA:69576"],"termid":"GO:0160166"}


id: PBO:0033766
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Rqh1_foci_during_cellular_response_to_ionizing_radiation","termid":"PBO:0033766"}


id: PBO:0003475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit Pop8 (predicted)","termid":"PBO:0003475"}


id: FYPO:0004892
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing an echinocandin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0002060","FYPO:0000257","FYPO:0002058","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on echinocandin","synonyms":[{"name":"normal cell population growth in presence of echinocandin","type":"exact"},{"name":"normal cell population growth on echinocandin","type":"exact"},{"name":"normal cellular response to echinocandin","type":"related"},{"name":"normal vegetative cell population growth on echinocandin","type":"exact"}],"termid":"FYPO:0004892"}


id: PATO:0000830
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000830 relative visual ability value (obsolete PATO:0000830)","termid":"PATO:0000830"}


id: GO:0070853
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a class VI myosin. The myosin VI heavy chain has a single IQ motif in the neck and a tail region with a coiled coil domain followed by a unique globular domain, a unique insertion that enables myosin VI to move towards the pointed or minus end of actin filaments.","definition_xrefs":["GOC:mah","PMID:15473855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin binding","termid":"GO:0017022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488","GO:0008092"],"is_obsolete":false,"name":"myosin VI binding","termid":"GO:0070853"}


id: PBO:0011424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate transmembrane transporter subunit Mpc2","termid":"PBO:0011424"}


id: FYPO:0000179
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein targeting to the vacuole via the multivesicular sorting pathway, leading to ubiquitin-dependent protein degradation, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal late endosome to vacuole transport","termid":"FYPO:0000171"},{"relation_name":"is_a","term_name":"abnormal protein targeting to vacuole","termid":"FYPO:0000676"},{"relation_name":"is_a","term_name":"abnormal protein degradation during vegetative growth","termid":"FYPO:0000845"},{"relation_name":"is_a","term_name":"abnormal proteolysis","termid":"FYPO:0005376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein targeting via MVB pathway","synonyms":[{"name":"abnormal protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway","type":"exact"},{"name":"abnormal protein targeting via MVB pathway during mitotic cell cycle","type":"related"},{"name":"abnormal protein targeting via multivesicular body sorting pathway","type":"exact"},{"name":"abnormal protein targeting via the multivesicular body sorting pathway during vegetative growth","type":"exact"}],"termid":"FYPO:0000179"}


id: PR:P78759
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- par2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta 2 isoform (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.12","synonyms":[{"name":"PP2A, B subunit, B' delta 2 isoform (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-par2","type":"exact"}],"termid":"PR:P78759"}


id: PBO:0077385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 126A","termid":"PBO:0077385"}


id: FYPO:0005097
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is abnormally arrested during G1 phase. Arrest may either occur under conditions where arrest is not a normal occurrence, or may progress differently from normal under conditions where arrest normally does take place.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle arrest in mitotic G1 phase","termid":"FYPO:0000445"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic interphase","termid":"FYPO:0001028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell cycle arrest in mitotic G1 phase","synonyms":[{"name":"abnormal cell cycle arrest in G1 phase during mitotic cell cycle","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic G1 phase during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle arrest in G1 phase","type":"exact"}],"termid":"FYPO:0005097"}


id: PBO:0075442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPARC like 1","termid":"PBO:0075442"}


id: PBO:0043588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL18A1 antisense RNA 2","termid":"PBO:0043588"}


id: GO:0046574
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of glucuronosides, yielding free glucuronic acid.","definition_xrefs":["PMID:12044176","PMID:10441389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"glycuronidase activity","synonyms":[{"name":"glucuronyl hydrolase activity","type":"exact"}],"termid":"GO:0046574"}


id: GO:0007140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process by which the cell nucleus divides as part of a meiotic cell cycle in the male germline.","definition_xrefs":["GOC:vw","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic nuclear division","termid":"GO:0140013"},{"relation_name":"part_of","term_name":"male gamete generation","termid":"GO:0048232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"male meiotic nuclear division","synonyms":[{"name":"male meiosis","type":"related"},{"name":"male nuclear division","type":"broad"}],"termid":"GO:0007140"}


id: GO:1902960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process.","definition_xrefs":["PMID:24577224","GOC:sjp","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endopeptidase activity","termid":"GO:0010951"},{"relation_name":"is_a","term_name":"regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","termid":"GO:1902959"},{"relation_name":"is_a","term_name":"negative regulation of amyloid precursor protein catabolic process","termid":"GO:1902992"},{"relation_name":"is_a","term_name":"negative regulation of aspartic-type peptidase activity","termid":"GO:1905246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","synonyms":[{"name":"down regulation of aspartate protease activity involved in APP catabolic process","type":"exact"},{"name":"down regulation of aspartate protease activity involved in APP catabolism","type":"exact"},{"name":"down regulation of aspartate protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down regulation of aspartate protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down regulation of aspartate protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down regulation of aspartate protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"down regulation of aspartic endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"down regulation of aspartic endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"down regulation of aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down regulation of aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"down regulation of aspartic protease activity involved in APP catabolic process","type":"exact"},{"name":"down regulation of aspartic protease activity involved in APP catabolism","type":"exact"},{"name":"down regulation of aspartic protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down regulation of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down regulation of aspartic protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down regulation of aspartic protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"down regulation of aspartic-type endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"down regulation of aspartic-type endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"down regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"down regulation of aspartyl protease activity involved in APP catabolic process","type":"exact"},{"name":"down regulation of aspartyl protease activity involved in APP catabolism","type":"exact"},{"name":"down regulation of aspartyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down regulation of aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down regulation of aspartyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down regulation of aspartyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"down regulation of carboxyl protease activity involved in APP catabolic process","type":"exact"},{"name":"down regulation of carboxyl protease activity involved in APP catabolism","type":"exact"},{"name":"down regulation of carboxyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down regulation of carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down regulation of carboxyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down regulation of carboxyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"down-regulation of aspartate protease activity involved in APP catabolic process","type":"exact"},{"name":"down-regulation of aspartate protease activity involved in APP catabolism","type":"exact"},{"name":"down-regulation of aspartate protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down-regulation of aspartate 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involved in amyloid precursor protein degradation","type":"exact"},{"name":"down-regulation of aspartic protease activity involved in APP catabolic process","type":"exact"},{"name":"down-regulation of aspartic protease activity involved in APP catabolism","type":"exact"},{"name":"down-regulation of aspartic protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down-regulation of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down-regulation of aspartic protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down-regulation of aspartic protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"down-regulation of aspartic-type endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"down-regulation of aspartic-type endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"down-regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down-regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down-regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down-regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"down-regulation of aspartyl protease activity involved in APP catabolic process","type":"exact"},{"name":"down-regulation of aspartyl protease activity involved in APP catabolism","type":"exact"},{"name":"down-regulation of aspartyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down-regulation of aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down-regulation of aspartyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down-regulation of aspartyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"down-regulation of carboxyl protease activity involved in APP catabolic process","type":"exact"},{"name":"down-regulation of carboxyl protease activity involved in APP catabolism","type":"exact"},{"name":"down-regulation of carboxyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"down-regulation of carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"down-regulation of carboxyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"down-regulation of carboxyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"downregulation of aspartate protease activity involved in APP catabolic process","type":"exact"},{"name":"downregulation of aspartate protease activity involved in APP catabolism","type":"exact"},{"name":"downregulation of aspartate protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"downregulation of aspartate protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"downregulation of aspartate protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"downregulation of aspartate protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"downregulation of aspartic endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"downregulation of aspartic endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"downregulation of aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"downregulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"downregulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"downregulation of aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"downregulation of aspartic protease activity involved in APP catabolic process","type":"exact"},{"name":"downregulation of aspartic protease activity involved in APP catabolism","type":"exact"},{"name":"downregulation of aspartic protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"downregulation of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"downregulation of aspartic protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"downregulation of aspartic protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"downregulation of aspartic-type endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"downregulation of aspartic-type endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"downregulation of aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"downregulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"downregulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"downregulation of aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"downregulation of aspartyl protease activity involved in APP catabolic process","type":"exact"},{"name":"downregulation of aspartyl protease activity involved in APP catabolism","type":"exact"},{"name":"downregulation of aspartyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"downregulation of aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"downregulation of aspartyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"downregulation of aspartyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"downregulation of carboxyl protease activity involved in APP catabolic process","type":"exact"},{"name":"downregulation of carboxyl protease activity involved in APP catabolism","type":"exact"},{"name":"downregulation of carboxyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"downregulation of carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"downregulation of carboxyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"downregulation of carboxyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"inhibition of aspartate protease activity involved in APP catabolic process","type":"narrow"},{"name":"inhibition of aspartate protease activity involved in APP catabolism","type":"narrow"},{"name":"inhibition of aspartate protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"inhibition of aspartate protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"inhibition of aspartate protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"inhibition of aspartate protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"inhibition of aspartic endopeptidase activity involved in APP catabolic process","type":"narrow"},{"name":"inhibition of aspartic endopeptidase activity involved in APP catabolism","type":"narrow"},{"name":"inhibition of aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"inhibition of aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"inhibition of aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"inhibition of aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"inhibition of aspartic protease activity involved in APP catabolic process","type":"narrow"},{"name":"inhibition of aspartic protease activity involved in APP catabolism","type":"narrow"},{"name":"inhibition of aspartic protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"inhibition of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"inhibition of aspartic protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"inhibition of aspartic protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"inhibition of aspartic-type endopeptidase activity involved in APP catabolic process","type":"narrow"},{"name":"inhibition of aspartic-type endopeptidase activity involved in APP catabolism","type":"narrow"},{"name":"inhibition of aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"inhibition of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"inhibition of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"inhibition of aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"inhibition of aspartyl protease activity involved in APP catabolic process","type":"narrow"},{"name":"inhibition of aspartyl protease activity involved in APP catabolism","type":"narrow"},{"name":"inhibition of aspartyl protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"inhibition of aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"inhibition of aspartyl protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"inhibition of aspartyl protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"inhibition of carboxyl protease activity involved in APP catabolic process","type":"narrow"},{"name":"inhibition of carboxyl protease activity involved in APP catabolism","type":"narrow"},{"name":"inhibition of carboxyl protease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"inhibition of carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"inhibition of carboxyl protease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"inhibition of carboxyl protease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"negative regulation of aspartate protease activity involved in APP catabolic process","type":"exact"},{"name":"negative regulation of aspartate protease activity involved in APP catabolism","type":"exact"},{"name":"negative regulation of aspartate protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"negative regulation of aspartate protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"negative regulation of aspartate protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"negative regulation of aspartate protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"negative regulation of aspartic endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"negative regulation of aspartic endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"negative regulation of aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"negative regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"negative regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"negative regulation of aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"negative regulation of aspartic protease activity involved in APP catabolic process","type":"exact"},{"name":"negative regulation of aspartic protease activity involved in APP catabolism","type":"exact"},{"name":"negative regulation of aspartic protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"negative regulation of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"negative regulation of aspartic protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"negative regulation of aspartic protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"negative regulation of aspartic-type endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"negative regulation of aspartic-type endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"negative regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"negative regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"negative regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"negative regulation of aspartyl protease activity involved in APP catabolic process","type":"exact"},{"name":"negative regulation of aspartyl protease activity involved in APP catabolism","type":"exact"},{"name":"negative regulation of aspartyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"negative regulation of aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"negative regulation of aspartyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"negative regulation of aspartyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"negative regulation of carboxyl protease activity involved in APP catabolic process","type":"exact"},{"name":"negative regulation of carboxyl protease activity involved in APP catabolism","type":"exact"},{"name":"negative regulation of carboxyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"negative regulation of carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"negative regulation of carboxyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"negative regulation of carboxyl protease activity involved in amyloid precursor protein degradation","type":"exact"}],"termid":"GO:1902960"}


id: PBO:0091437
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExProt","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription increased","termid":"PBO:0091437"}


id: FYPO:0004317
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the post-anaphase array of microtubules is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"},{"relation_name":"is_a","term_name":"abnormal post-anaphase array","termid":"FYPO:0004316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"abnormal post-anaphase array morphology","synonyms":[{"name":"abnormal microtubule cytoskeleton morphology during mitotic cell cycle","type":"related"},{"name":"abnormal post-anaphase array morphology during vegetative growth","type":"exact"},{"name":"abnormal post-anaphase microtubule array morphology","type":"exact"}],"termid":"FYPO:0004317"}


id: PBO:0067031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 44, pseudogene","termid":"PBO:0067031"}


id: GO:0001132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a member of the class of TATA-binding proteins (TBP), including any of the TBP-related factors (TRFs), in order to modulate transcription. The transcription factor may or may not also interact selectively with DNA as well.","definition_xrefs":["GOC:txnOH","PMID:16858867"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase II transcription factor activity, TBP-class protein binding (obsolete GO:0001132)","synonyms":[{"name":"TATA-binding protein binding RNA polymerase II transcription factor activity","type":"narrow"},{"name":"TBP-class protein binding RNA polymerase II transcription factor activity","type":"exact"},{"name":"TRF protein binding RNA polymerase II transcription factor activity","type":"narrow"}],"termid":"GO:0001132"}


id: PBO:0059549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded tRNA-Gln (CAA/G)","termid":"PBO:0059549"}


id: PBO:0059992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 12","termid":"PBO:0059992"}


id: PBO:0043186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citron rho-interacting serine/threonine kinase","termid":"PBO:0043186"}


id: PBO:0081355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 180","termid":"PBO:0081355"}


id: PBO:0083129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-serine dehydratase (aka D-serine ammonia-lyase); converts D-serine to pyruvate and ammonia by a reaction dependent on pyridoxal 5'-phosphate and zinc; may play a role in D-serine detoxification; L-serine is not a substrate","termid":"PBO:0083129"}


id: PBO:0071511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 14","termid":"PBO:0071511"}


id: GO:0009600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a nematode is received and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of other organism","termid":"GO:0098543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of nematode","synonyms":[{"name":"perception of nematode","type":"related"}],"termid":"GO:0009600"}


id: PBO:0091887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA, LTR proximal (predicted)","termid":"PBO:0091887"}


id: PBO:0039896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho/Rac guanine nucleotide exchange factor 2","termid":"PBO:0039896"}


id: PBO:0047082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 136 member A","termid":"PBO:0047082"}


id: PBO:0017649
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital disorders of glygosylation","termid":"PBO:0017649"}


id: GO:0097443
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multivesicular body surrounded by and connected with multiple tubular compartments with associated vesicles.","definition_xrefs":["NIF_Subcellular:sao1028571114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome","termid":"GO:0005768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005768","GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"sorting endosome","synonyms":[{"name":"MVB-tubule complex","type":"related"}],"termid":"GO:0097443"}


id: PBO:0029065
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_riboflavin_binding","termid":"PBO:0029065"}


id: GO:0050842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of copper into a protein by L-cysteinyl copper sulfido molybdopterin cytosine dinucleotide.","definition_xrefs":["RESID:AA0355"],"gene_count":0,"genotype_count":0,"name":"obsolete copper incorporation via L-cysteinyl copper sulfido molybdopterin cytosine dinucleotide (obsolete GO:0050842)","termid":"GO:0050842"}


id: GO:0045253
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of a regulatory and catalytic subunit that catalyzes the dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex.","definition_xrefs":["PMID:9395502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase complex","termid":"GO:0008287"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"pyruvate dehydrogenase (lipoamide) phosphatase complex","termid":"GO:0045253"}


id: PBO:0042293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD3 gamma subunit of T-cell receptor complex","termid":"PBO:0042293"}


id: FYPO:0003786
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the central core of the centromeric regions is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0003744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to centromere central core during vegetative growth","secondary_identifiers":["FYPO:0003765"],"synonyms":[{"name":"abolished protein localisation to chromatin at centromere central core during vegetative growth","type":"exact"},{"name":"abolished protein localization to centromere central core during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromatin at centromere central core during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromatin at centromere central core during vegetative growth","type":"exact"},{"name":"protein localization to centromere central core abolished during vegetative growth","type":"exact"},{"name":"protein localization to chromatin at centromere central core abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003786"}


id: PBO:0083444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified essential ORF SPC110/YDR356W","termid":"PBO:0083444"}


id: _global:has_participant
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"a relation between a process and a continuant, in which the continuant is somehow involved in the process","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_participant","secondary_identifiers":["RO:0000057"],"termid":"_global:has_participant"}


id: PBO:0031336
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_benomyl","termid":"PBO:0031336"}


id: GO:1901936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-caryophyllene.","definition_xrefs":["PMID:22867794","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene catabolic process","termid":"GO:0051763"},{"relation_name":"is_a","term_name":"beta-caryophyllene metabolic process","termid":"GO:1901935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"beta-caryophyllene catabolic process","synonyms":[{"name":"beta-caryophyllene breakdown","type":"exact"},{"name":"beta-caryophyllene catabolism","type":"exact"},{"name":"beta-caryophyllene degradation","type":"exact"}],"termid":"GO:1901936"}


id: SO:0100012
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Irregular, unstructured regions of a protein's backbone, as distinct from the regular region (namely alpha helix and beta strand - characterised by specific patterns of main-chain hydrogen bonds).","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"peptide_coil","synonyms":[{"name":"coil","type":"related"},{"name":"peptide coil","type":"exact"},{"name":"random coil","type":"related"}],"termid":"SO:0100012"}


id: GO:0009858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction between a pollen grain and pistil that results in unimpeded growth of the pollen tube through the stigma and style.","definition_xrefs":["GOC:lr","ISBN:0387987819"],"gene_count":0,"genotype_count":0,"name":"obsolete compatible pollen-pistil interaction (obsolete GO:0009858)","synonyms":[{"name":"compatible pollen-pistil interaction","type":"exact"}],"termid":"GO:0009858"}


id: GO:0047178
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-radyl-2-lyso-sn-glycero-3-phosphoethanolamine + 1-radyl-2-acyl-sn-glycero-3-phosphocholine = 1-radyl-2-lyso-sn-glycero-3-phosphocholine + 1-radyl-2-acyl-sn-glycero-3-phosphoethanolamine.","definition_xrefs":["EC:2.3.1.148","MetaCyc:2.3.1.148-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"glycerophospholipid acyltransferase (CoA-dependent) activity","secondary_identifiers":["RHEA:20972"],"synonyms":[{"name":"1-organyl-2-acyl-sn-glycero-3-phosphocholine:1-organyl-2-lyso-sn-glycero-3-phosphoethanolamine acyltransferase (CoA-dependent)","type":"related"}],"termid":"GO:0047178"}


id: PBO:0050695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 9 pseudogene 1","termid":"PBO:0050695"}


id: FYPO:0003981
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione transferase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal glutathione transferase activity","termid":"FYPO:0003980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"increased glutathione transferase activity","termid":"FYPO:0003981"}


id: PBO:0090002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L13","termid":"PBO:0090002"}


id: PBO:0001575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING finger-like protein Ini1","termid":"PBO:0001575"}


id: MOD:00218
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-serine residue and the 5'-end of RNA through a phosphodiester to form O4'-(phospho-5'-RNA)-L-serine.","definition_xrefs":["PubMed:1705009","RESID:AA0213"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleic acid linked residue","termid":"MOD:00751"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(phospho-5'-RNA)-L-serine","synonyms":[{"name":"(S)-2-amino-3-(5'-ribonucleic acid phosphonoxy)propanoic acid","type":"exact"},{"name":"MOD_RES O-(5'-phospho-RNA)-serine","type":"exact"},{"name":"O-(phospho-5'-RNA)-L-serine","type":"exact"},{"name":"O3-(phospho-5'-RNA)-L-serine","type":"exact"},{"name":"O3-L-serine 5'-RNA phosphodiester","type":"exact"}],"termid":"MOD:00218"}


id: FYPO:0005442
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic sister chromatid separation is abnormal at the telomeric regions. The remainder of the sister chromatids may or may not separate normally.","definition_xrefs":["PMID:21540296","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid separation","termid":"FYPO:0000670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0000337"],"is_obsolete":false,"name":"abnormal telomeric DNA separation","synonyms":[{"name":"abnormal DNA separation at telomere","type":"exact"},{"name":"abnormal mitotic sister chromatid separation at telomere","type":"exact"},{"name":"abnormal mitotic telomeric DNA separation","type":"exact"},{"name":"abnormal segregation of telomeric DNA","type":"related"},{"name":"abnormal telomere separation","type":"exact"},{"name":"abnormal telomeric DNA separation during mitosis","type":"exact"},{"name":"abnormal telomeric DNA separation during mitotic cell cycle","type":"related"},{"name":"abnormal telomeric DNA separation during vegetative growth","type":"exact"}],"termid":"FYPO:0005442"}


id: PBO:0067641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 814, pseudogene","termid":"PBO:0067641"}


id: PBO:0041900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACN subunit beta associated regulatory protein","termid":"PBO:0041900"}


id: GO:1905716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cornification.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:26014679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"is_a","term_name":"regulation of cornification","termid":"GO:1905715"},{"relation_name":"negatively_regulates","term_name":"cornification","termid":"GO:0070268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cornification","synonyms":[{"name":"down regulation of cornification","type":"exact"},{"name":"down-regulation of cornification","type":"exact"},{"name":"downregulation of cornification","type":"exact"},{"name":"inhibition of cornification","type":"narrow"}],"termid":"GO:1905716"}


id: GO:2000586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of platelet-derived growth factor receptor-beta signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of platelet-derived growth factor receptor signaling pathway","termid":"GO:0010640"},{"relation_name":"regulates","term_name":"platelet-derived growth factor receptor-beta signaling pathway","termid":"GO:0035791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of platelet-derived growth factor receptor-beta signaling pathway","synonyms":[{"name":"regulation of PDGF receptor-beta signaling pathway","type":"exact"},{"name":"regulation of PDGFR-beta signaling pathway","type":"exact"},{"name":"regulation of betaPDGF receptor signaling pathway","type":"exact"},{"name":"regulation of platelet-derived growth factor receptor-beta signalling pathway","type":"exact"}],"termid":"GO:2000586"}


id: GO:0016811
data:
  {"annotated_genes":["SJAG_01075","SJAG_03227","SJAG_00450","SJAG_00811","SJAG_02276","SJAG_02721","SJAG_05287","SJAG_03775","SJAG_03013","SJAG_04467","SJAG_00476","SJAG_02766","SJAG_03844","SJAG_00691","SJAG_03627","SJAG_01231","SJAG_02618","SJAG_04939","SJAG_00392","SJAG_00964","SJAG_04186","SJAG_01416","SJAG_00581","SJAG_04039","SJAG_01987"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84596,107511],"is_not":false,"summary":null,"term":"GO:0016811"},{"annotations":[110758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043530"},{"annotations":[87819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004099"},{"annotations":[88872,107141,113378,106467,89476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004359"},{"annotations":[105518,108173,93287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004407"},{"annotations":[105519,100258,108174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031078"},{"annotations":[100259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990162"},{"annotations":[105520,100260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032129"},{"annotations":[105521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140937"},{"annotations":[93288,100261,105522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034739"},{"annotations":[105523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180033"},{"annotations":[105524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180032"},{"annotations":[96404,59027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043864"},{"annotations":[97663],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000225"},{"annotations":[86118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032041"},{"annotations":[86119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140765"},{"annotations":[100263,110490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046969"},{"annotations":[100264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046970"},{"annotations":[105671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008936"},{"annotations":[91011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050152"},{"annotations":[100786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000224"},{"annotations":[66681,103012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008418"},{"annotations":[103013,77317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070773"},{"annotations":[87500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009039"},{"annotations":[87824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004848"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds","termid":"GO:0016810"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00450":null,"SJAG_00476":null,"SJAG_00581":null,"SJAG_00691":null,"SJAG_00811":null,"SJAG_00964":null,"SJAG_01075":null,"SJAG_01231":null,"SJAG_01416":null,"SJAG_01987":null,"SJAG_02276":null,"SJAG_02618":null,"SJAG_02721":null,"SJAG_02766":null,"SJAG_03013":null,"SJAG_03227":null,"SJAG_03627":null,"SJAG_03775":null,"SJAG_03844":null,"SJAG_04039":null,"SJAG_04186":null,"SJAG_04467":null,"SJAG_04939":null,"SJAG_05287":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9673053","Reactome:R-HSA-9673054","EC:3.5.1.-"],"termid":"GO:0016811","terms_by_termid":{"GO:0000224":null,"GO:0000225":null,"GO:0004099":null,"GO:0004359":null,"GO:0004407":null,"GO:0004848":null,"GO:0008418":null,"GO:0008936":null,"GO:0009039":null,"GO:0016811":null,"GO:0031078":null,"GO:0032041":null,"GO:0032129":null,"GO:0034739":null,"GO:0043530":null,"GO:0043864":null,"GO:0046969":null,"GO:0046970":null,"GO:0050152":null,"GO:0070773":null,"GO:0140765":null,"GO:0140937":null,"GO:0180032":null,"GO:0180033":null,"GO:1990162":null}}


id: PATO:0001660
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An action potential which is relatively low.","definition_xrefs":["PATOC:GVG"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001660 decreased action potential (obsolete PATO:0001660)","synonyms":[{"name":"low action potential","type":"exact"}],"termid":"PATO:0001660"}


id: GO:0018530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-6-hydroxynicotine + H2O + O2 = 6-hydroxypseudooxynicotine + H2O2.","definition_xrefs":["EC:1.5.3.6","RHEA:10012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxy-nicotine oxidase activity","termid":"GO:0019116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(R)-6-hydroxynicotine oxidase activity","secondary_identifiers":["MetaCyc:R-6-HYDROXYNICOTINE-OXIDASE-RXN","KEGG_REACTION:R07170","UM-BBD_reactionID:r0477"],"synonyms":[{"name":"(R)-6-hydroxynicotine:oxygen oxidoreductase activity","type":"related"},{"name":"6-hydroxy-D-nicotine oxidase activity","type":"exact"},{"name":"D-6-hydroxynicotine oxidase activity","type":"related"}],"termid":"GO:0018530"}


id: PBO:0064142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKN2 antisense RNA 1","termid":"PBO:0064142"}


id: PBO:0086970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of acetolactate synthase; acetolactate synthase catalyzes the first step of branched-chain amino acid biosynthesis; enhances activity of the Ilv2p catalytic subunit, localizes to mitochondria","termid":"PBO:0086970"}


id: GO:0036199
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholest-4-en-3-one + NADH + H+ + O2 = 26-hydroxycholest-4-en-3-one + NAD+ + H2O. This reaction involves the hydroxylation of the C26 carbon, followed by oxidation of the alcohol to the carboxylic acid via the aldehyde intermediate.","definition_xrefs":["EC:1.14.15.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cholest-4-en-3-one 26-monooxygenase activity","secondary_identifiers":["RHEA:51564","KEGG_REACTION:R09859"],"termid":"GO:0036199"}


id: GO:0098968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vesicle-mediated transport of a neurotransmitter receptor complex from the postsynaptic membrane to the postsynaptic early endosome.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"},{"relation_name":"is_a","term_name":"protein localization to postsynapse","termid":"GO:0062237"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"},{"relation_name":"is_a","term_name":"receptor localization to synapse","termid":"GO:0097120"},{"relation_name":"is_a","term_name":"neurotransmitter receptor transport","termid":"GO:0099637"},{"relation_name":"is_a","term_name":"protein localization to early endosome","termid":"GO:1902946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"neurotransmitter receptor transport postsynaptic membrane to endosome","termid":"GO:0098968"}


id: PBO:0040036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo like helical domain containing 3","termid":"PBO:0040036"}


id: PBO:0003686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial membrane protein Mgr2 (predicted)","termid":"PBO:0003686"}


id: FYECO:0000026
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which vanadate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ vanadate","synonyms":[{"name":"sodium orthovanadate added","type":"exact"}],"termid":"FYECO:0000026"}


id: GO:0034596
data:
  {"annotated_genes":["SJAG_02706","SJAG_00880"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92970,102032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043812"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of the 4-phosphate group of a phosphatidylinositol phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate phosphatase activity","termid":"GO:0052866"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_02706":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol phosphate 4-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1676124","Reactome:R-HSA-8849969","Reactome:R-HSA-1675988","Reactome:R-HSA-1676133"],"synonyms":[{"name":"PI(4)P-phosphatase activity","type":"exact"},{"name":"PI4P-phosphatase activity","type":"exact"},{"name":"PtdIns4P-phosphatase activity","type":"exact"},{"name":"inositol 4-phosphatase","type":"narrow"},{"name":"phosphoinositide 4-phosphatase activity","type":"exact"}],"termid":"GO:0034596","terms_by_termid":{"GO:0043812":null}}


id: PR:Q9UUA2-2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent DNA helicase pfh1 (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9UUA2-2.","definition_xrefs":["UniProtKB:Q9UUA2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent DNA helicase pfh1 (Schizosaccharomyces pombe 972h-)","termid":"PR:Q9UUA2"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase pfh1 isoform Nuclear (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:Q9UUA2-2"],"synonyms":[{"name":"Spom972h-PIF1/iso:Nuclear","type":"exact"}],"termid":"PR:Q9UUA2-2"}


id: PBO:0091771
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CeNTaurin b5-like gene","termid":"PBO:0091771"}


id: GO:1902177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of an oxidative stress-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["PMID:11672522","GOC:TermGenie","GOC:BHF","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902175"},{"relation_name":"is_a","term_name":"positive regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001244"},{"relation_name":"positively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to oxidative stress","termid":"GO:0008631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"activation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"narrow"},{"name":"positive regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"up regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"up-regulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"upregulation of intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"}],"termid":"GO:1902177"}


id: PBO:0012575
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S phase delayed","termid":"PBO:0012575"}


id: PBO:0079326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 14","termid":"PBO:0079326"}


id: PBO:0073396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain bifurcated histone lysine methyltransferase 2","termid":"PBO:0073396"}


id: PBO:0076672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell activation inhibitor, mitochondrial","termid":"PBO:0076672"}


id: GO:0019370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene metabolic process","termid":"GO:0006691"},{"relation_name":"is_a","term_name":"icosanoid biosynthetic process","termid":"GO:0046456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"leukotriene biosynthetic process","secondary_identifiers":["Wikipedia:Leukotriene#Leukotriene_synthesis"],"synonyms":[{"name":"leukotriene anabolism","type":"exact"},{"name":"leukotriene biosynthesis","type":"exact"},{"name":"leukotriene formation","type":"exact"},{"name":"leukotriene synthesis","type":"exact"}],"termid":"GO:0019370"}


id: PBO:0088115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar ATPase V0 domain subunit c'; involved in proton transport activity; hydrophobic integral membrane protein (proteolipid) containing four transmembrane segments; N and C termini are in the vacuolar lumen","termid":"PBO:0088115"}


id: GO:0004392
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: heme b + 3 O2 + 3 reduced [NADPH-hemoprotein reductase] = biliverdin + CO + Fe2+ + H+ + 3 H2O + 3 oxidized [NADPH-hemoprotein reductase].","definition_xrefs":["RHEA:21764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"heme oxygenase (decyclizing) activity","secondary_identifiers":["Reactome:R-HSA-189398","MetaCyc:HEME-OXYGENASE-DECYCLIZING-RXN","EC:1.14.14.18"],"synonyms":[{"name":"ORP33 proteins","type":"related"},{"name":"haem oxidase activity","type":"related"},{"name":"haem oxygenase (decyclizing) activity","type":"exact"},{"name":"haem oxygenase activity","type":"related"},{"name":"heme oxidase activity","type":"related"},{"name":"heme oxygenase activity","type":"related"},{"name":"heme,hydrogen-donor:oxygen oxidoreductase (alpha-methene-oxidizing, hydroxylating)","type":"related"}],"termid":"GO:0004392"}


id: PR:Q09831
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ppk14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ppk14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.05","synonyms":[{"name":"Spom972h-ppk14","type":"exact"}],"termid":"PR:Q09831"}


id: PBO:0061374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 34","termid":"PBO:0061374"}


id: PBO:0027827
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_transcription_during_G0_phase","termid":"PBO:0027827"}


id: PBO:0071039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 41","termid":"PBO:0071039"}


id: PBO:0038965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activity dependent neuroprotector homeobox","termid":"PBO:0038965"}


id: GO:0035960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ergosterol biosynthetic process by modulating the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:16055745","PMID:11533229"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ergosterol biosynthetic process by regulation of transcription from RNA polymerase II promoter (obsolete GO:0035960)","synonyms":[{"name":"regulation of ergosterol anabolism by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of ergosterol anabolism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ergosterol biosynthesis by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of ergosterol biosynthesis by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ergosterol biosynthetic process by regulation of transcription from Pol II promoter","type":"related"},{"name":"regulation of ergosterol formation by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of ergosterol formation by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ergosterol synthesis by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of ergosterol synthesis by regulation of transcription from RNA polymerase II promoter","type":"related"}],"termid":"GO:0035960"}


id: PBO:0044354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 41","termid":"PBO:0044354"}


id: PBO:0110463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACO2 pseudogene 2","termid":"PBO:0110463"}


id: GO:0060410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the chemical reactions and pathways involving acetylcholine, the acetic acid ester of the organic base choline. Acetylcholine is a major neurotransmitter and neuromodulator both in the central and peripheral nervous systems. It also acts as a paracrine signal in various non-neural tissues.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"regulation of acetylcholine metabolic process","termid":"GO:0060408"},{"relation_name":"negatively_regulates","term_name":"acetylcholine metabolic process","termid":"GO:0008291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of acetylcholine metabolic process","termid":"GO:0060410"}


id: FYPO:0001833
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phosphoglycerate mutase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal phosphoglycerate mutase activity","termid":"FYPO:0001831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"increased phosphoglycerate mutase activity","termid":"FYPO:0001833"}


id: PBO:0003958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARP2/3 actin-organizing complex subunit Sop2","termid":"PBO:0003958"}


id: PATO:0001649
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved towards the side.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved","termid":"PATO:0000406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curved lateral","termid":"PATO:0001649"}


id: PR:Q9URY8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A chloride anion exchanger that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02282","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate permease C869.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.05c","secondary_identifiers":["UniProtKB:Q9URY8"],"synonyms":[{"name":"Spom972h-SLC26A3","type":"exact"}],"termid":"PR:Q9URY8"}


id: GO:1901716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gamma-aminobutyric acid catabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular catabolic process","termid":"GO:0031330"},{"relation_name":"is_a","term_name":"negative regulation of cellular amino acid metabolic process","termid":"GO:0045763"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of gamma-aminobutyric acid catabolic process","termid":"GO:1901715"},{"relation_name":"negatively_regulates","term_name":"gamma-aminobutyric acid catabolic process","termid":"GO:0009450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"negative regulation of gamma-aminobutyric acid catabolic process","synonyms":[{"name":"down regulation of 4-aminobutanoate catabolic process","type":"exact"},{"name":"down regulation of 4-aminobutanoate catabolism","type":"exact"},{"name":"down regulation of 4-aminobutyrate catabolic process","type":"exact"},{"name":"down regulation of 4-aminobutyrate catabolism","type":"exact"},{"name":"down regulation of GABA catabolic process","type":"exact"},{"name":"down regulation of GABA catabolism","type":"exact"},{"name":"down regulation of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"down regulation of gamma-aminobutyric acid catabolic process","type":"exact"},{"name":"down regulation of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"down regulation of gamma-aminobutyric acid degradation","type":"exact"},{"name":"down-regulation of 4-aminobutanoate catabolic process","type":"exact"},{"name":"down-regulation of 4-aminobutanoate catabolism","type":"exact"},{"name":"down-regulation of 4-aminobutyrate catabolic process","type":"exact"},{"name":"down-regulation of 4-aminobutyrate catabolism","type":"exact"},{"name":"down-regulation of GABA catabolic process","type":"exact"},{"name":"down-regulation of GABA catabolism","type":"exact"},{"name":"down-regulation of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"down-regulation of gamma-aminobutyric acid catabolic process","type":"exact"},{"name":"down-regulation of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"down-regulation of gamma-aminobutyric acid degradation","type":"exact"},{"name":"downregulation of 4-aminobutanoate catabolic process","type":"exact"},{"name":"downregulation of 4-aminobutanoate catabolism","type":"exact"},{"name":"downregulation of 4-aminobutyrate catabolic process","type":"exact"},{"name":"downregulation of 4-aminobutyrate catabolism","type":"exact"},{"name":"downregulation of GABA catabolic process","type":"exact"},{"name":"downregulation of GABA catabolism","type":"exact"},{"name":"downregulation of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"downregulation of gamma-aminobutyric acid catabolic process","type":"exact"},{"name":"downregulation of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"downregulation of gamma-aminobutyric acid degradation","type":"exact"},{"name":"inhibition of 4-aminobutanoate catabolic process","type":"exact"},{"name":"inhibition of 4-aminobutanoate catabolism","type":"exact"},{"name":"inhibition of 4-aminobutyrate catabolic process","type":"exact"},{"name":"inhibition of 4-aminobutyrate catabolism","type":"exact"},{"name":"inhibition of GABA catabolic process","type":"exact"},{"name":"inhibition of GABA catabolism","type":"exact"},{"name":"inhibition of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"inhibition of gamma-aminobutyric acid catabolic process","type":"narrow"},{"name":"inhibition of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"inhibition of gamma-aminobutyric acid degradation","type":"exact"},{"name":"negative regulation of 4-aminobutanoate catabolic process","type":"exact"},{"name":"negative regulation of 4-aminobutanoate catabolism","type":"exact"},{"name":"negative regulation of 4-aminobutyrate catabolic process","type":"exact"},{"name":"negative regulation of 4-aminobutyrate catabolism","type":"exact"},{"name":"negative regulation of GABA catabolic process","type":"exact"},{"name":"negative regulation of GABA catabolism","type":"exact"},{"name":"negative regulation of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"negative regulation of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"negative regulation of gamma-aminobutyric acid degradation","type":"exact"}],"termid":"GO:1901716"}


id: PBO:0056983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 30c-1","termid":"PBO:0056983"}


id: GO:0032680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tumor necrosis factor production.","definition_xrefs":["PMID:15560120","GOC:mah","PMID:10891884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903555"},{"relation_name":"regulates","term_name":"tumor necrosis factor production","termid":"GO:0032640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of tumor necrosis factor production","secondary_identifiers":["GO:0042534","GO:1904467"],"synonyms":[{"name":"regulation of TNF production","type":"exact"},{"name":"regulation of TNF-alpha production","type":"exact"},{"name":"regulation of cachectin production","type":"exact"},{"name":"regulation of tumor necrosis factor biosynthetic process","type":"narrow"},{"name":"regulation of tumor necrosis factor secretion","type":"narrow"},{"name":"regulation of tumor necrosis factor-alpha production","type":"exact"}],"termid":"GO:0032680"}


id: GO:0003772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Co-chaperonins are proteins that bind to chaperones and this complex then folds misfolded proteins. Co-chaperonins by themselves do not possess chaperone activity.","definition_xrefs":["GOC:rb"],"gene_count":0,"genotype_count":0,"name":"obsolete co-chaperonin activity (obsolete GO:0003772)","synonyms":[{"name":"co-chaperonin activity","type":"exact"}],"termid":"GO:0003772"}


id: PBO:0085417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane transporter of the major facilitator superfamily; involved in resistance to azole drugs such as ketoconazole and fluconazole","termid":"PBO:0085417"}


id: FYPO:0000661
data:
  {"alleles_by_uniquename":{"SJAG_02796:allele-1":{"allele_type":"amino_acid_mutation","description":"A343T","gene_uniquename":"SJAG_02796","name":"pyk1-A343T","uniquename":"SJAG_02796:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115241],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007363"}]},"cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate or other catalytic property of a specified catalytic activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity phenotype","termid":"FYPO:0000654"},{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02796":null},"genotype_count":1,"genotypes_by_uniquename":{"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pyk1-A343T(aa)","display_uniquename":"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02796:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abnormal catalytic activity","references_by_uniquename":{"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_02796"],"single_locus_genotype_uniquenames":["pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type"],"termid":"FYPO:0000661","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYPO:0007363":null,"FYPO_EXT:0000002":null}}


id: GO:0048877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of the steady-state number of cells within a population of cells in the retina.","definition_xrefs":["GOC:dph","GOC:isa_complete","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retina homeostasis","termid":"GO:0001895"},{"relation_name":"is_a","term_name":"homeostasis of number of cells within a tissue","termid":"GO:0048873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"homeostasis of number of retina cells","termid":"GO:0048877"}


id: GO:0002144
data:
  {"annotated_genes":["SJAG_03932","SJAG_01302"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[101901,104463],"is_not":false,"summary":null,"term":"GO:0002144"}]},"cv_name":"cellular_component","definition":"A complex of two proteins involved in the thiolation of uridine 34 (U34) of tRNAs decoding two-family box triplets.","definition_xrefs":["PMID:18391219","PMID:17062623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"sulfurtransferase complex","termid":"GO:1990228"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01302":null,"SJAG_03932":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005829","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cytosolic tRNA wobble base thiouridylase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Ctu1-Ctu2 complex","type":"narrow"},{"name":"tRNA thiouridylase","type":"broad"}],"termid":"GO:0002144","terms_by_termid":{"GO:0002144":null}}


id: PBO:0086917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative zinc-cluster transcription factor; involved in utilization of iron-transporting siderophore pulcherrimin","termid":"PBO:0086917"}


id: CHEBI:4031
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclosporin A","termid":"CHEBI:4031"}


id: PBO:0081642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 568","termid":"PBO:0081642"}


id: GO:1902465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H3-K27 trimethylation.","definition_xrefs":["PMID:19270745","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K27 trimethylation (obsolete GO:1902465)","synonyms":[{"name":"down regulation of histone H3-K27 trimethylation","type":"exact"},{"name":"down-regulation of histone H3-K27 trimethylation","type":"exact"},{"name":"downregulation of histone H3-K27 trimethylation","type":"exact"},{"name":"inhibition of histone H3-K27 trimethylation","type":"narrow"}],"termid":"GO:1902465"}


id: PBO:0071512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 15","termid":"PBO:0071512"}


id: GO:0070184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling tyrosine to tyrosyl-tRNA in a mitochondrion, catalyzed by tyrosyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosyl-tRNA aminoacylation","termid":"GO:0006437"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0140053","GO:0006520","GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"mitochondrial tyrosyl-tRNA aminoacylation","termid":"GO:0070184"}


id: GO:0004694
data:
  {"annotated_genes":["SJAG_00690","SJAG_00169","SJAG_01942"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88564,88865,105729],"is_not":false,"summary":null,"term":"GO:0004694"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + [eukaryotic translation initiation factor 2 alpha subunit] = ADP + [eukaryotic translation initiation factor 2 alpha subunit] phosphate.","definition_xrefs":["InterPro:IPR015516","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null,"SJAG_01942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0004672","GO:0003674","GO:0140096","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"eukaryotic translation initiation factor 2alpha kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0004694","terms_by_termid":{"GO:0004694":null}}


id: PR:Q9USZ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A trafficking protein particle complex subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02988","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport protein particle 20 kDa subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11G11.04","secondary_identifiers":["UniProtKB:Q9USZ5"],"synonyms":[{"name":"Spom972h-TRAPPC2","type":"exact"},{"name":"TRAPP 20 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USZ5"}


id: PBO:0085408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane pyridoxine (vitamin B6) transporter; member of the purine-cytosine permease subfamily within the major facilitator superfamily; proton symporter with similarity to Fcy21p, Fcy2p, and Fcy22p","termid":"PBO:0085408"}


id: FYPO:0001938
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of cytochrome-c oxidase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal cytochrome-c oxidase activity","termid":"FYPO:0001937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0005447","FYPO:0000002","FYPO:0002114","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"decreased cytochrome-c oxidase activity","synonyms":[{"name":"reduced cytochrome-c oxidase activity","type":"exact"}],"termid":"FYPO:0001938"}


id: MOD:01955
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from RESID","definition_xrefs":["RESID:AA0600","PubMed:21499260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese containing modified residue","termid":"MOD:00740"},{"relation_name":"is_a","term_name":"calcium containing modified residue","termid":"MOD:01482"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-alanine residue","termid":"MOD:02065"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-aspartic acid residue","termid":"MOD:02066"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-alaninato bis-L-aspartato tris-L-glutamato L-histidino calcium tetramanganese pentoxide","synonyms":[{"name":"4Mn-Ca-5O cluster","type":"exact"},{"name":"L-alaninato bis-L-aspartato tris-L-glutamato L-histidino calcium tetramanganese pentoxide","type":"exact"},{"name":"mu2-alaninato-1kappaO(1),3kappaO(1')-mu2-aspartato-1kappaO(4),5kappaO(4')-mu2-aspartato-2kappaO(4),3kappaO(4')-mu2-glutamato-3kappaO(5),4kappaO(5')-mu2-glutamato-4kappaO(5),5kappaO(5')-mu-glutamato-2kappaO(5)-mu-histidino-2kappaN(tau)-mu4-oxido-1:2:4:5kappa(4)O-tri-mu3-oxido-1:2:3kappa(3)O;1:3:4kappa(3)O;2:3:4kappa(3)O;mu-oxido-4:5kappa(2)O-calciumtetramanganese","type":"exact"},{"name":"photosystem II catalytic cluster","type":"exact"}],"termid":"MOD:01955"}


id: PBO:0042377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD207 molecule","termid":"PBO:0042377"}


id: GO:0018569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hydroquinone + O2 = cis,trans-4-hydroxymuconic semialdehyde.","definition_xrefs":["UM-BBD_reactionID:r0228"],"gene_count":0,"genotype_count":0,"name":"obsolete hydroquinone 1,2-dioxygenase activity (obsolete GO:0018569)","termid":"GO:0018569"}


id: PBO:0084027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi GDP-mannose transporter; regulates Golgi function and glycosylation in Golgi; VRG4 has a paralog, HVG1, that arose from the whole genome duplication","termid":"PBO:0084027"}


id: GO:0070624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of thiamine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of vitamin metabolic process","termid":"GO:0046137"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of thiamine biosynthetic process","termid":"GO:0070623"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"negatively_regulates","term_name":"thiamine biosynthetic process","termid":"GO:0009228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"negatively_regulates","termid":"GO:0006766"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"negative regulation of thiamine biosynthetic process","synonyms":[{"name":"down regulation of thiamine biosynthetic process","type":"exact"},{"name":"down-regulation of thiamine biosynthetic process","type":"exact"},{"name":"downregulation of thiamine biosynthetic process","type":"exact"},{"name":"inhibition of thiamine biosynthetic process","type":"narrow"},{"name":"negative regulation of thiamin biosynthetic process","type":"exact"},{"name":"negative regulation of thiamine anabolism","type":"exact"},{"name":"negative regulation of thiamine biosynthesis","type":"exact"},{"name":"negative regulation of thiamine formation","type":"exact"},{"name":"negative regulation of thiamine synthesis","type":"exact"}],"termid":"GO:0070624"}


id: PBO:0065234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 13 pseudogene 2","termid":"PBO:0065234"}


id: GO:0016902
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces an acceptor other than a cytochrome, disulfide, NAD, NADP, oxygen or a quinone or similar compound.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on the CH-OH group of donors, other acceptors (obsolete GO:0016902)","synonyms":[{"name":"oxidoreductase activity, acting on the CH-OH group of donors, other acceptors","type":"exact"}],"termid":"GO:0016902"}


id: PBO:0071310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 33","termid":"PBO:0071310"}


id: PBO:0077238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domain family 3","termid":"PBO:0077238"}


id: GO:0051249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lymphocyte activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte activation","termid":"GO:0002694"},{"relation_name":"regulates","term_name":"lymphocyte activation","termid":"GO:0046649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lymphocyte activation","termid":"GO:0051249"}


id: GO:0005618
data:
  {"annotated_genes":["SJAG_00620","SJAG_04067","SJAG_01835","SJAG_01288","SJAG_01755","SJAG_04073","SJAG_03204","SJAG_00784","SJAG_02131","SJAG_02192","SJAG_04238","SJAG_03824","SJAG_00876","SJAG_04236","SJAG_03483","SJAG_02222","SJAG_01975","SJAG_05285","SJAG_04184","SJAG_01321","SJAG_04720","SJAG_04327","SJAG_02135","SJAG_02916","SJAG_02478","SJAG_01970","SJAG_03295","SJAG_03013","SJAG_01290","SJAG_04723","SJAG_06622","SJAG_03828","SJAG_00239","SJAG_04864","SJAG_02093","SJAG_01028","SJAG_00218","SJAG_06621","SJAG_03903","SJAG_02649","SJAG_01017","SJAG_04771","SJAG_00340","SJAG_01086","SJAG_03057","SJAG_00096","SJAG_00027","SJAG_02945"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[110146,86305,105125,110436,113860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005619"},{"annotations":[103828],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043188"},{"annotations":[87814],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005631"},{"annotations":[112027,84757,96863,96864,112026,88539,88540],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010339"},{"annotations":[98782,97125,97701,99034,97702,99035,112643,102904],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070263"},{"annotations":[98516,106501,104970,104969,100233,109402,114401,85988,86179,97568,104964,109403,104965,109229,111671,110541,87639,96871,102143,84758,91159,102738,104966,104968,111694,83519,85208,104446,113850,110821,87629,84135,90075,87926,106502,104967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009277"},{"annotations":[83588],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005632"},{"annotations":[83693,83694,111888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031160"}]},"cv_name":"cellular_component","definition":"The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.","definition_xrefs":["GOC:giardia","ISBN:0198547684","Wikipedia:Microbial_cyst","PMID:15134259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure","termid":"GO:0030312"}],"gene_count":48,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00096":null,"SJAG_00218":null,"SJAG_00239":null,"SJAG_00340":null,"SJAG_00620":null,"SJAG_00784":null,"SJAG_00876":null,"SJAG_01017":null,"SJAG_01028":null,"SJAG_01086":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01321":null,"SJAG_01755":null,"SJAG_01835":null,"SJAG_01970":null,"SJAG_01975":null,"SJAG_02093":null,"SJAG_02131":null,"SJAG_02135":null,"SJAG_02192":null,"SJAG_02222":null,"SJAG_02478":null,"SJAG_02649":null,"SJAG_02916":null,"SJAG_02945":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03204":null,"SJAG_03295":null,"SJAG_03483":null,"SJAG_03824":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04067":null,"SJAG_04073":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04327":null,"SJAG_04720":null,"SJAG_04723":null,"SJAG_04771":null,"SJAG_04864":null,"SJAG_05285":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell wall","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Cell_wall"],"termid":"GO:0005618","terms_by_termid":{"GO:0005619":null,"GO:0005631":null,"GO:0005632":null,"GO:0009277":null,"GO:0010339":null,"GO:0031160":null,"GO:0043188":null,"GO:0070263":null}}


id: GO:0042754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a circadian rhythm behavior.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian rhythm","termid":"GO:0042752"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"negatively_regulates","term_name":"circadian rhythm","termid":"GO:0007623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of circadian rhythm","synonyms":[{"name":"down regulation of circadian rhythm","type":"exact"},{"name":"down-regulation of circadian rhythm","type":"exact"},{"name":"downregulation of circadian rhythm","type":"exact"},{"name":"inhibition of circadian rhythm","type":"narrow"}],"termid":"GO:0042754"}


id: GO:0072680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a thymocyte through distinct intrathymic niches (e.g. medulla, cortex), where it receives a unique set of developmental cues required for T-cell development, dependent on extracellular matrix components including fibronectin, collagen and laminin.","definition_xrefs":["CL:0000893","GOC:mah","GOC:BHF","PMID:20856819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substrate-dependent cell migration","termid":"GO:0006929"},{"relation_name":"is_a","term_name":"thymocyte migration","termid":"GO:0072679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"extracellular matrix-dependent thymocyte migration","synonyms":[{"name":"extracellular matrix-dependent immature T cell migration","type":"related"},{"name":"extracellular matrix-dependent immature T lymphocyte migration","type":"related"},{"name":"extracellular matrix-dependent immature T-cell migration","type":"related"},{"name":"extracellular matrix-dependent immature T-lymphocyte migration","type":"related"},{"name":"extracellular matrix-dependent thymic lymphocyte migration","type":"exact"}],"termid":"GO:0072680"}


id: GO:0031395
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A neuropeptide hormone secreted by the central nervous system of insects that stimulates the tanning and sclerotization of the adult cuticle following eclosion. The active hormone consists of an obligate heterodimer of the alpha and beta subunits.","definition_xrefs":["GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005576","GO:0032991"],"is_obsolete":false,"name":"bursicon neuropeptide hormone complex","termid":"GO:0031395"}


id: PBO:0062938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 4-hydroxylase subunit alpha 3","termid":"PBO:0062938"}


id: PBO:0087841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Threonine deaminase, catalyzes first step in isoleucine biosynthesis; expression is under general amino acid control; ILV1 locus exhibits highly positioned nucleosomes whose organization is independent of known ILV1 regulation","termid":"PBO:0087841"}


id: PBO:0002644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4 h4.1","termid":"PBO:0002644"}


id: PBO:0081165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein X-linked","termid":"PBO:0081165"}


id: PBO:0024856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage ubiquitin-protein ligase E3 Mpe1 (predicted)","termid":"PBO:0024856"}


id: FYPO:0001309
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a larger than normal proportion of cells in the population remains viable after entering stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased viability in stationary phase","synonyms":[{"name":"decreased chronological cell aging","type":"related"},{"name":"increased cell population viability in stationary phase","type":"exact"},{"name":"increased chronological lifespan","type":"related"}],"termid":"FYPO:0001309"}


id: PR:O42965
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC19G7.17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19G7.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.17","synonyms":[{"name":"Spom972h-SPBC19G7.17","type":"exact"}],"termid":"PR:O42965"}


id: GO:0008687
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydroxyphenylacetate + O2 = 5-formyl-2-hydroxyhepta-2,4-dienedioate + H+.","definition_xrefs":["RHEA:15633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3,4-dihydroxyphenylacetate 2,3-dioxygenase activity","secondary_identifiers":["MetaCyc:1.13.11.15-RXN","EC:1.13.11.15","UM-BBD_reactionID:r0364","KEGG_REACTION:R03303"],"synonyms":[{"name":"3,4-dihydroxyphenylacetate:oxygen 2,3-oxidoreductase (decyclizing)","type":"related"},{"name":"3,4-dihydroxyphenylacetic acid 2,3-dioxygenase activity","type":"related"},{"name":"HPC dioxygenase activity","type":"related"},{"name":"homoprotocatechuate 2,3-dioxygenase activity","type":"related"}],"termid":"GO:0008687"}


id: PBO:0085217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Palmitoyl transferase involved in protein palmitoylation; acts as a negative regulator of pheromone response pathway; required for endocytosis of pheromone receptors; involved in cell shape control; contains ankyrin repeats; AKR1 has a paralog, AKR2, that arose from the whole genome duplication; any of several human homologs encoding DHHC-type zinc fingers (ZDHHC) can complement temperature sensitivity of yeast akr1 null mutant","termid":"PBO:0085217"}


id: PBO:0082737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rpd3S histone deacetylase complex; Esa1p-associated factor, nonessential component of the NuA4 acetyltransferase complex, homologous to Drosophila dosage compensation protein MSL3; plays a role in regulating Ty1 transposition","termid":"PBO:0082737"}


id: GO:0043051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the contraction and relaxation movements of the pharyngeal muscle that mediates feeding in nematodes.","definition_xrefs":["GOC:cab1","PMID:2181052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eating behavior","termid":"GO:1903998"},{"relation_name":"regulates","term_name":"nematode pharyngeal pumping","termid":"GO:0043050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nematode pharyngeal pumping","termid":"GO:0043051"}


id: PBO:0051114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-69-2","termid":"PBO:0051114"}


id: PBO:0071263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23 pseudogene 8","termid":"PBO:0071263"}


id: GO:0045717
data:
  {"annotated_genes":["SJAG_03130"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107322],"is_not":false,"summary":null,"term":"GO:0045717"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of fatty acids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"regulation of fatty acid biosynthetic process","termid":"GO:0042304"},{"relation_name":"is_a","term_name":"negative regulation of fatty acid metabolic process","termid":"GO:0045922"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"negatively_regulates","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03130":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"negative regulation of fatty acid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of fatty acid biosynthetic process","type":"exact"},{"name":"down-regulation of fatty acid biosynthetic process","type":"exact"},{"name":"downregulation of fatty acid biosynthetic process","type":"exact"},{"name":"inhibition of fatty acid biosynthetic process","type":"narrow"},{"name":"negative regulation of fatty acid anabolism","type":"exact"},{"name":"negative regulation of fatty acid biosynthesis","type":"exact"},{"name":"negative regulation of fatty acid formation","type":"exact"},{"name":"negative regulation of fatty acid synthesis","type":"exact"}],"termid":"GO:0045717","terms_by_termid":{"GO:0045717":null}}


id: PBO:0012837
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mature peptide sequence is YTPKVPYM","termid":"PBO:0012837"}


id: FYPO:0007772
data:
  {"alleles_by_uniquename":{"SJAG_01242:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01242","name":"vps32delta","uniquename":"SJAG_01242:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_03891:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03891","name":"alx1delta","uniquename":"SJAG_03891:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115190,115379,115380,115386,115387,115479,115480,115487],"is_not":false,"summary":null,"term":"FYPO:0007772"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which reformation of the nuclear envelope after mitotic nuclear division begins later than normal.","definition_xrefs":["PMID:32109380","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear envelope organization","termid":"FYPO:0000815"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01242":null,"SJAG_01745":null,"SJAG_03891":null,"SJAG_03892":null,"SJAG_05207":null},"genotype_count":5,"genotypes_by_uniquename":{"alx1delta":{"display_name":"alx1delta","display_uniquename":"alx1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03891:allele-1","expression":"Null"}]}]},"cmp7delta":{"display_name":"cmp7delta","display_uniquename":"cmp7delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_05207:allele-1","expression":"Null"}]}]},"lem2delta":{"display_name":"lem2delta","display_uniquename":"lem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01745:allele-1","expression":"Null"}]}]},"vps32delta":{"display_name":"vps32delta","display_uniquename":"vps32delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01242:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of mitotic nuclear membrane reassembly","references_by_uniquename":{"PMID:21802294":null,"PMID:32109380":null,"PMID:32243490":null},"single_locus_annotated_genes":["SJAG_03891","SJAG_03892","SJAG_01745","SJAG_05207","SJAG_01242"],"single_locus_genotype_uniquenames":["vps4delta","cmp7delta","vps32delta","lem2delta","alx1delta"],"synonyms":[{"name":"delayed mitotic nuclear membrane reassembly","type":"exact"},{"name":"delayed onset of mitotic nuclear envelope reassembly","type":"related"},{"name":"delayed onset of mitotic nuclear membrane reassembly during mitotic cell cycle","type":"related"},{"name":"delayed onset of mitotic nuclear membrane reassembly during vegetative growth","type":"exact"}],"termid":"FYPO:0007772","terms_by_termid":{"FYPO:0007772":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: GO:0010838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of keratinocyte proliferation. Keratinocyte proliferation is the multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of keratinocyte proliferation","termid":"GO:0010837"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"positively_regulates","term_name":"keratinocyte proliferation","termid":"GO:0043616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of keratinocyte proliferation","termid":"GO:0010838"}


id: PR:Q09674
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC5H10.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0317 protein C5H10.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.01","synonyms":[{"name":"Spom972h-SPAC5H10.01","type":"exact"}],"termid":"PR:Q09674"}


id: GO:0043728
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-keto-4-methylthiobutyrate + L-glutamine = 2-oxoglutaramate + L-methionine.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-keto-4-methylthiobutyrate aminotransferase activity (obsolete GO:0043728)","termid":"GO:0043728"}


id: GO:0034833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: geranylate + CoASH = trans-geranyl-CoA + OH-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete geranylate CoA-transferase activity (obsolete GO:0034833)","termid":"GO:0034833"}


id: PBO:0073097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex subunit D pseudogene 1","termid":"PBO:0073097"}


id: PBO:0066299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol binding protein 1","termid":"PBO:0066299"}


id: GO:0018485
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: salicylaldehyde + NAD+ + H2O = salicylate + NADH + H+.","definition_xrefs":["RHEA:18537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"salicylaldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["UM-BBD_enzymeID:r0339","EC:1.2.1.65","MetaCyc:1.2.1.65-RXN"],"synonyms":[{"name":"salicylaldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018485"}


id: GO:0030954
data:
  {"annotated_genes":["SJAG_02737"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113019],"is_not":false,"summary":null,"term":"GO:0030954"}]},"cv_name":"biological_process","definition":"The 'de novo' formation of an astral microtubule, in which tubulin heterodimers form metastable oligomeric aggregates, some of which go on to support formation of a complete microtubule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astral microtubule organization","termid":"GO:0030953"},{"relation_name":"is_a","term_name":"microtubule nucleation by microtubule organizing center","termid":"GO:0051418"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02737":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0007049","GO:0008150","GO:0044085","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"astral microtubule nucleation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030954","terms_by_termid":{"GO:0030954":null}}


id: GO:0046738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The intentional, virally-encoded stimulation of an innate host defense response to viral infection.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete induction of innate immune response in host by virus (obsolete GO:0046738)","synonyms":[{"name":"active induction of innate immune response in host by virus","type":"related"},{"name":"active viral induction of innate immune response in host","type":"exact"}],"termid":"GO:0046738"}


id: PBO:0039097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase pseudogene 1","termid":"PBO:0039097"}


id: MOD:01049
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a hydrogen atom of an L-histidine residue with a halogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"halogenated histidine","synonyms":[{"name":"HalHis","type":"exact"}],"termid":"MOD:01049"}


id: GO:1904790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of shelterin complex assembly.","definition_xrefs":["GO_REF:0000058","PMID:24270157","GOC:BHF","GOC:BHF_telomere","GOC:TermGenie","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"shelterin complex assembly","termid":"GO:0071573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of shelterin complex assembly","synonyms":[{"name":"regulation of Pot1 complex assembly","type":"exact"},{"name":"regulation of Pot1-Tpz1 complex assembly","type":"exact"},{"name":"regulation of shelterin complex formation","type":"exact"},{"name":"regulation of telosome assembly","type":"exact"}],"termid":"GO:1904790"}


id: GO:0005983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of starch, the most important reserve polysaccharide in plants.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"starch metabolic process","termid":"GO:0005982"},{"relation_name":"is_a","term_name":"glucan catabolic process","termid":"GO:0009251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"starch catabolic process","secondary_identifiers":["MetaCyc:PWY-842"],"synonyms":[{"name":"starch breakdown","type":"exact"},{"name":"starch catabolism","type":"exact"},{"name":"starch degradation","type":"exact"}],"termid":"GO:0005983"}


id: PBO:0072445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 9","termid":"PBO:0072445"}


id: PBO:0085590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in axial bud site selection; prevents repolarization of cells at previous division sites; recruited with Nba1p to the cell cortex and to cytokinesis remnants (bud scars) by Aim44p and Nap1p where Nba1p prevent Rsr1p-mediated activation of Cdc24p, and therefore Cdc42p activation; acts with Nba1p to establish transient bud scar localization of Rga1p, a Cdc42p GAP; localizes to the nucleus and to cell division site during G2/M, and is then stably recruited to cytokinesis remnants","termid":"PBO:0085590"}


id: PBO:0000156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase family","termid":"PBO:0000156"}


id: FYPO:0005810
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a new growth zone forms along the lateral portion of the cell (often in the middle) before septation, such that a single cell grows in the form of the letter T, when the cell undergoes transition from G0 phase, re-entering the cell cycle phase from which it entered G0 (G1 or G2). Cell length is normal.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-shaped cell","termid":"FYPO:0005566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985","FYPO:0005568","FYPO:0005447"],"is_obsolete":false,"name":"T-shaped cell during recovery from quiescence","synonyms":[{"name":"T-shaped cell during cell cycle re-entry","type":"exact"},{"name":"T-shaped cell during exit from cell quiescence","type":"exact"},{"name":"T-shaped cell during recovery from stationary phase","type":"related"},{"name":"T-shaped cell during transition from cell quiescence","type":"exact"},{"name":"cell morphology, T shaped during recovery from quiescence","type":"exact"}],"termid":"FYPO:0005810"}


id: PBO:0081616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 544","termid":"PBO:0081616"}


id: PBO:0070091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 5 pseudogene","termid":"PBO:0070091"}


id: SO:0001605
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant within a CDS resulting in the gain of an amino acid to the resulting polypeptide.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_sequence_variant","termid":"SO:0001603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino_acid_insertion","synonyms":[{"name":"amino acid insertion","type":"exact"}],"termid":"SO:0001605"}


id: PBO:0111842
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab subfamily","termid":"PBO:0111842"}


id: PBO:0066106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras protein specific guanine nucleotide releasing factor 1","termid":"PBO:0066106"}


id: GO:0004205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-8 activity (obsolete GO:0004205)","synonyms":[{"name":"caspase-8 activity","type":"exact"}],"termid":"GO:0004205"}


id: PBO:0051023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor binding protein 3","termid":"PBO:0051023"}


id: GO:0003780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with two actin filaments to anchor them together.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete actin cross-linking activity (obsolete GO:0003780)","synonyms":[{"name":"actin cross-linking activity","type":"exact"}],"termid":"GO:0003780"}


id: GO:2000092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesonephric glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glomerular mesangial cell proliferation","termid":"GO:0072126"},{"relation_name":"is_a","term_name":"regulation of mesonephric glomerular mesangial cell proliferation","termid":"GO:2000090"},{"relation_name":"is_a","term_name":"positive regulation of cell proliferation involved in mesonephros development","termid":"GO:2000608"},{"relation_name":"positively_regulates","term_name":"mesonephric glomerular mesangial cell proliferation involved in mesonephros development","termid":"GO:0061269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesonephric glomerular mesangial cell proliferation","termid":"GO:2000092"}


id: GO:0000831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 1D-myo-inositol hexakisphosphate = ADP + 6-diphospho-1D-myo-inositol (1,2,3,4,5)pentakisphosphate.","definition_xrefs":["GOC:elh","PMID:16429326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol hexakisphosphate kinase activity","termid":"GO:0000828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"inositol hexakisphosphate 6-kinase activity","termid":"GO:0000831"}


id: GO:0102443
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(1-) + a (2S)-2-hydroxycarboxylate = NADH(2-) + H+ + a 2-oxo carboxylate.","definition_xrefs":["EC:1.1.1.337","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"L-2-hydroxycarboxylate dehydrogenase (NAD+) activity","secondary_identifiers":["RHEA:34555","MetaCyc:RXN-13927"],"termid":"GO:0102443"}


id: PBO:0089211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic translation release factor class II, GTPase eRF3","termid":"PBO:0089211"}


id: GO:0015834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of peptidoglycan peptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Peptidoglycan peptides are the oligopeptides found in peptidoglycan networks which cross-link the polysaccharide chains.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide transport","termid":"GO:0015833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"peptidoglycan-associated peptide transport","synonyms":[{"name":"murein peptide transport","type":"exact"},{"name":"muropeptide transport","type":"exact"},{"name":"peptidoglycan peptide transport","type":"exact"}],"termid":"GO:0015834"}


id: PBO:0075213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntrophin gamma 1","termid":"PBO:0075213"}


id: PBO:0087792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO E3 ligase; required for synaptonemal complex formation; localizes to synapsis initiation sites on meiotic chromosomes; associates with centromeres early in meiosis, then with chromosome axes and finally with double-strand break sites that are engaged in repair by crossovers; potential Cdc28p substrate","termid":"PBO:0087792"}


id: PBO:0078206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 6-8","termid":"PBO:0078206"}


id: PBO:0051060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 3-22","termid":"PBO:0051060"}


id: MOD:00515
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex HexNAc(2)","definition_xrefs":["RESID:AA0151#var","PubMed:111247","PubMed:1694179","Unimod:147","PubMed:5490222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"HexNAc2dHex1 N4-glycosylated asparagine","synonyms":[{"name":"HexNAc(2)dHex(1)","type":"related"},{"name":"HexNAc2dHex1","type":"related"}],"termid":"MOD:00515"}


id: PBO:0083528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SFL1/YOR140W","termid":"PBO:0083528"}


id: PR:Q9US08
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US08"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation-specific protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC607.10","synonyms":[{"name":"Spom972h-spo3","type":"exact"}],"termid":"PR:Q9US08"}


id: PBO:0052164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 12","termid":"PBO:0052164"}


id: PBO:0065342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periaxin","termid":"PBO:0065342"}


id: PBO:0029279
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_mitotic_spindle_pole_body_during_telophase","termid":"PBO:0029279"}


id: PBO:0073264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 8","termid":"PBO:0073264"}


id: PBO:0080388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS16 core subunit of CORVET and HOPS complexes","termid":"PBO:0080388"}


id: PBO:0082954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic proteinase A (Pep4p) inhibitor; dependent on Pbs2p and Hog1p protein kinases for osmotic induction; intrinsically unstructured, N-terminal half becomes ordered in the active site of proteinase A upon contact","termid":"PBO:0082954"}


id: PBO:0031122
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_proline_nitrogen_source","termid":"PBO:0031122"}


id: GO:0008233
data:
  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id: GO:0000196
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id: GO:0050062
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id: GO:0010071
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id: FYPO:0007625
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id: PBO:0079910
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id: GO:0042374
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id: PBO:0040913
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id: PBO:0060913
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id: GO:0047354
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id: PBO:0075245
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 15","termid":"PBO:0075245"}


id: PBO:0084193
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone H3; core histone protein required for chromatin assembly, part of heterochromatin-mediated telomeric and HM silencing; one of two identical histone H3 proteins (see HHT1); regulated by acetylation, methylation, and phosphorylation; H3K14 acetylation plays an important role in the unfolding of strongly positioned nucleosomes during repair of UV damage","termid":"PBO:0084193"}


id: PBO:0038585
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA acyltransferase 2","termid":"PBO:0038585"}


id: PBO:0064028
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 62","termid":"PBO:0064028"}


id: PBO:0052823
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 89, pseudogene","termid":"PBO:0052823"}


id: GO:0002389
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id: PBO:0029307
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_spheroid_cell_during_G0_to_G1_transition","termid":"PBO:0029307"}


id: PBO:0081709
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF628 divergent transcript","termid":"PBO:0081709"}


id: PBO:0089786
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin, WD repeat Nup155","termid":"PBO:0089786"}


id: GO:0034263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the accumulation of misfolded proteins in the endoplasmic reticulum triggers a response that positively regulates autophagy.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER overload response","termid":"GO:0006983"},{"relation_name":"is_a","term_name":"positive regulation of autophagy","termid":"GO:0010508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0006914","GO:0044248","GO:0023052"],"is_obsolete":false,"name":"positive regulation of autophagy in response to ER overload","synonyms":[{"name":"autophagy in response to ER stress","type":"exact"},{"name":"autophagy in response to endoplasmic reticulum overload","type":"exact"}],"termid":"GO:0034263"}


id: PBO:0048315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 26","termid":"PBO:0048315"}


id: PBO:0002189
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked spondyloepiphyseal dysplasia tarda","termid":"PBO:0002189"}


id: PBO:0113036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall mannoprotein that localizes to birth scars of daughter cells; linked to beta-1,3- and beta-1,6-glucan heteropolymer through phosphodiester bond; required for propionic acid resistance; targeted to vacuole via AP-3 pathway","termid":"PBO:0113036"}


id: PBO:0083868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein component of an SCF ubiquitin-ligase complex; modular substrate specificity factor which associates with core SCF (Cdc53p, Skp1p and Hrt1p/Rbx1p) to form the SCF(Grr1) complex; SCF(Grr1) acts as a ubiquitin-protein ligase directing ubiquitination of substrates such as: Gic2p, Mks1p, Mth1p, Cln1p, Cln2p and Cln3p; involved in carbon catabolite repression, glucose-dependent divalent cation transport, glucose transport, morphogenesis, and sulfite detoxification","termid":"PBO:0083868"}


id: PBO:0031547
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_septation","termid":"PBO:0031547"}


id: GO:0047010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1S,3R,4S)-3,4-dihydroxycyclohexane-1-carboxylate + NAD+ = (1S,4S)-4-hydroxy-3-oxocyclohexane-1-carboxylate + H+ + NADH.","definition_xrefs":["EC:1.1.1.166","RHEA:10516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"hydroxycyclohexanecarboxylate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R05315","MetaCyc:1.1.1.166-RXN"],"synonyms":[{"name":"(-)t-3,t-4-dihydroxycyclohexane-c-1-carboxylate-NAD oxidoreductase activity","type":"related"},{"name":"(1S,3R,4S)-3,4-dihydroxycyclohexane-1-carboxylate:NAD+ 3-oxidoreductase activity","type":"related"},{"name":"dihydroxycyclohexanecarboxylate dehydrogenase activity","type":"related"}],"termid":"GO:0047010"}


id: PBO:0026862
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromatin_silencing_at_centromere","termid":"PBO:0026862"}


id: PBO:0040764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEN domain containing 2","termid":"PBO:0040764"}


id: GO:0072686
data:
  {"annotated_genes":["SJAG_04010","SJAG_01211","SJAG_01371","SJAG_03437","SJAG_03592","SJAG_01429","SJAG_05319","SJAG_00697","SJAG_03540","SJAG_00723","SJAG_00773","SJAG_00526","SJAG_04257","SJAG_01110","SJAG_05313","SJAG_02608","SJAG_03906","SJAG_00646","SJAG_01887","SJAG_03569","SJAG_00724","SJAG_02807","SJAG_02821","SJAG_02336","SJAG_01832","SJAG_01849","SJAG_01232","SJAG_00207","SJAG_02025","SJAG_03116","SJAG_04412","SJAG_03345","SJAG_02266","SJAG_00140","SJAG_00840","SJAG_00163","SJAG_04884","SJAG_01546","SJAG_00692","SJAG_02624","SJAG_01557","SJAG_02248","SJAG_03846","SJAG_02209","SJAG_03048","SJAG_01613","SJAG_04140","SJAG_00918","SJAG_02098","SJAG_00245","SJAG_00930","SJAG_02460","SJAG_05205","SJAG_00800","SJAG_01634","SJAG_04074","SJAG_04607","SJAG_04940","SJAG_01330","SJAG_02695","SJAG_00514","SJAG_00943","SJAG_01805","SJAG_03731","SJAG_04623","SJAG_00762","SJAG_04464","SJAG_05315","SJAG_01297","SJAG_04931","SJAG_04745","SJAG_03387","SJAG_00082","SJAG_00879","SJAG_00883","SJAG_01224","SJAG_04841","SJAG_01391","SJAG_00666","SJAG_02045","SJAG_01837","SJAG_03901","SJAG_02542","SJAG_03073","SJAG_02761","SJAG_01909","SJAG_02311","SJAG_01775","SJAG_03959","SJAG_05266","SJAG_03062","SJAG_03911"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74526,83662,84067,84353,85204,85350,85422,85674,85807,85925,86049,87362,87773,88796,88972,89845,89995,91266,91606,91943,92097,92332,92531,92830,93344,93446,94441,94676,95274,95696,95884,95885,96193,96432,96575,96590,98412,98507,98958,99110,99781,99952,100319,102019,102206,102258,103283,103801,104143,104300,104753,104935,105076,105146,105261,105798,105942,105954,106621,107247,107499,107557,107564,107740,107953,107991,109471,110606,110751,111071,111131,113641,114202,114718,114753],"is_not":false,"summary":null,"term":"GO:0072686"},{"annotations":[99953,87429,104301,99604],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061673"},{"annotations":[93039],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905721"},{"annotations":[103552],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990941"},{"annotations":[96433,97480,102359,114719],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990498"},{"annotations":[107954,87968,99605,114754,98413,111222,107248,86050,93345,97107,107067,112744,96591,87030,89846,87430,85318,90821,99724,85684,91819,104302,99954,113642,97481],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990023"},{"annotations":[94677,95275,103553,114203],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990537"},{"annotations":[96434,114204],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0097431"}]},"cv_name":"cellular_component","definition":"A spindle that forms as part of mitosis. Mitotic and meiotic spindles contain distinctive complements of proteins associated with microtubules.","definition_xrefs":["GOC:vw","PMID:8027178","PMID:18367542","PMID:11408572","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle","termid":"GO:0005819"}],"gene_count":92,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00140":null,"SJAG_00163":null,"SJAG_00207":null,"SJAG_00245":null,"SJAG_00514":null,"SJAG_00526":null,"SJAG_00646":null,"SJAG_00666":null,"SJAG_00692":null,"SJAG_00697":null,"SJAG_00723":null,"SJAG_00724":null,"SJAG_00762":null,"SJAG_00773":null,"SJAG_00800":null,"SJAG_00840":null,"SJAG_00879":null,"SJAG_00883":null,"SJAG_00918":null,"SJAG_00930":null,"SJAG_00943":null,"SJAG_01110":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01232":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01371":null,"SJAG_01391":null,"SJAG_01429":null,"SJAG_01546":null,"SJAG_01557":null,"SJAG_01613":null,"SJAG_01634":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01832":null,"SJAG_01837":null,"SJAG_01849":null,"SJAG_01887":null,"SJAG_01909":null,"SJAG_02025":null,"SJAG_02045":null,"SJAG_02098":null,"SJAG_02209":null,"SJAG_02248":null,"SJAG_02266":null,"SJAG_02311":null,"SJAG_02336":null,"SJAG_02460":null,"SJAG_02542":null,"SJAG_02608":null,"SJAG_02624":null,"SJAG_02695":null,"SJAG_02761":null,"SJAG_02807":null,"SJAG_02821":null,"SJAG_03048":null,"SJAG_03062":null,"SJAG_03073":null,"SJAG_03116":null,"SJAG_03345":null,"SJAG_03387":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03569":null,"SJAG_03592":null,"SJAG_03731":null,"SJAG_03846":null,"SJAG_03901":null,"SJAG_03906":null,"SJAG_03911":null,"SJAG_03959":null,"SJAG_04010":null,"SJAG_04074":null,"SJAG_04140":null,"SJAG_04257":null,"SJAG_04412":null,"SJAG_04464":null,"SJAG_04607":null,"SJAG_04623":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04884":null,"SJAG_04931":null,"SJAG_04940":null,"SJAG_05205":null,"SJAG_05266":null,"SJAG_05313":null,"SJAG_05315":null,"SJAG_05319":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"mitotic spindle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0072686","terms_by_termid":{"GO:0061673":null,"GO:0072686":null,"GO:0097431":null,"GO:1905721":null,"GO:1990023":null,"GO:1990498":null,"GO:1990537":null,"GO:1990941":null}}


id: PBO:0069346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 606, pseudogene","termid":"PBO:0069346"}


id: GO:0042642
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The myosin part of any complex of actin, myosin, and accessory proteins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin complex","termid":"GO:0016459"},{"relation_name":"part_of","term_name":"actomyosin","termid":"GO:0042641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0015629"],"is_obsolete":false,"name":"actomyosin, myosin complex part","termid":"GO:0042642"}


id: PBO:0061143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME/NM23 nucleoside diphosphate kinase 6","termid":"PBO:0061143"}


id: PBO:0072253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 28","termid":"PBO:0072253"}


id: PR:Q10181
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rit1 gene.","definition_xrefs":["UniProtKB:Q10181","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3F10.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.06c","synonyms":[{"name":"Spom972h-rit1","type":"exact"}],"termid":"PR:Q10181"}


id: PBO:0070925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 33","termid":"PBO:0070925"}


id: GO:0070745
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is composed of an interleukin-12 alpha subunit (p35, product of the IL12A gene) and an EBI3 subunit and is secreted into the extracellular space.","definition_xrefs":["GOC:add","PMID:19161428","PMID:19161429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005576","GO:0005575"],"is_obsolete":false,"name":"interleukin-35 complex","synonyms":[{"name":"EBI3","type":"narrow"},{"name":"IL-35 complex","type":"exact"},{"name":"IL12A","type":"narrow"},{"name":"p35","type":"narrow"}],"termid":"GO:0070745"}


id: GO:0106187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of hydrons linked to an oxidoreduction reaction.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on hydrons linked to oxidoreductase reactions (obsolete GO:0106187)","secondary_identifiers":["EC:7.1.1.-"],"termid":"GO:0106187"}


id: GO:0009752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a salicylic acid stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus","termid":"GO:0009593"},{"relation_name":"is_a","term_name":"response to salicylic acid","termid":"GO:0009751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of salicylic acid stimulus","synonyms":[{"name":"perception of salicylic acid stimulus","type":"related"}],"termid":"GO:0009752"}


id: MOD:02048
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-histidine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-histidine residue","synonyms":[{"name":"XlnkHis","type":"exact"}],"termid":"MOD:02048"}


id: GO:0008740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-rhamnose = L-rhamnulose.","definition_xrefs":["RHEA:23160","EC:5.3.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"L-rhamnose isomerase activity","secondary_identifiers":["KEGG_REACTION:R02437","MetaCyc:RHAMNISOM-RXN"],"synonyms":[{"name":"L-rhamnose aldose-ketose-isomerase activity","type":"related"},{"name":"L-rhamnose ketol-isomerase activity","type":"related"},{"name":"rhamnose isomerase activity","type":"related"}],"termid":"GO:0008740"}


id: PBO:0090008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2C catalytic subunit Ptc1","termid":"PBO:0090008"}


id: FYPO:0002871
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a growing cell tip is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell tip during vegetative growth","termid":"FYPO:0001586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to growing cell tip","synonyms":[{"name":"decreased protein localisation to growing cell tip","type":"exact"},{"name":"decreased protein localization to growing cell end","type":"exact"},{"name":"decreased protein localization to growing cell tip during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to growing cell tip during vegetative growth","type":"exact"},{"name":"reduced protein localization to growing cell tip","type":"exact"}],"termid":"FYPO:0002871"}


id: PBO:0085816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expressed at both mRNA and protein levels; partially overlaps ORF RSC2/YLR357W","termid":"PBO:0085816"}


id: GO:0044856
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which plasma membrane rafts are transported to, or maintained in, a specific location.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"is_a","term_name":"membrane raft localization","termid":"GO:0051665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0051179"],"is_obsolete":false,"name":"plasma membrane raft localization","termid":"GO:0044856"}


id: PBO:0000981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim17 (predicted)","termid":"PBO:0000981"}


id: SO:0001738
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of the H4 histone whereby multiple lysines are acylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_acylation_region","termid":"SO:0001737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H4K_acylation_region","synonyms":[{"name":"H4K acylation region","type":"exact"},{"name":"H4KAc","type":"related"}],"termid":"SO:0001738"}


id: PR:O14099
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2F3.16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C2F3.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.16","synonyms":[{"name":"Spom972h-SPAC2F3.16","type":"exact"}],"termid":"PR:O14099"}


id: PBO:0081935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zn regulated GTPase metalloprotein activator 1E","termid":"PBO:0081935"}


id: PBO:0000155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1445 family protein","termid":"PBO:0000155"}


id: PBO:0090477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine N5 monooxygenase","termid":"PBO:0090477"}


id: PBO:0069350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 610, pseudogene","termid":"PBO:0069350"}


id: PR:P87238
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cue1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUE domain-containing protein 4, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.13c","synonyms":[{"name":"Spom972h-cue1","type":"exact"}],"termid":"PR:P87238"}


id: PBO:0011105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADHX epimerase (predicted)","termid":"PBO:0011105"}


id: GO:0015516
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: tartrate(out) + succinate(in) = tartrate(in) + succinate(out).","definition_xrefs":["TC:2.A.47.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate transmembrane transporter activity","termid":"GO:0015141"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"tartrate transmembrane transporter activity","termid":"GO:0015554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"tartrate:succinate antiporter activity","termid":"GO:0015516"}


id: PBO:0054203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1583","termid":"PBO:0054203"}


id: GO:0070404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the reduced form, NADH, of nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"NAD binding","termid":"GO:0051287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"NADH binding","synonyms":[{"name":"NAD (reduced) binding","type":"exact"},{"name":"reduced NAD binding","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide binding","type":"exact"}],"termid":"GO:0070404"}


id: GO:0002907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of mature B cell apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"positive regulation of B cell apoptotic process","termid":"GO:0002904"},{"relation_name":"is_a","term_name":"regulation of mature B cell apoptotic process","termid":"GO:0002905"},{"relation_name":"positively_regulates","term_name":"mature B cell apoptotic process","termid":"GO:0002901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mature B cell apoptotic process","synonyms":[{"name":"activation of mature B cell apoptosis","type":"narrow"},{"name":"positive regulation of mature B cell apoptosis","type":"narrow"},{"name":"stimulation of mature B cell apoptosis","type":"narrow"},{"name":"up regulation of mature B cell apoptosis","type":"exact"},{"name":"up-regulation of mature B cell apoptosis","type":"exact"},{"name":"upregulation of mature B cell apoptosis","type":"exact"}],"termid":"GO:0002907"}


id: PBO:0052377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 20B","termid":"PBO:0052377"}


id: GO:0001228
data:
  {"annotated_genes":["SJAG_04388","SJAG_01243","SJAG_00163","SJAG_03519","SJAG_03538","SJAG_02472","SJAG_04839","SJAG_04009","SJAG_04092","SJAG_02311","SJAG_05288","SJAG_05247","SJAG_02730","SJAG_04813","SJAG_01916","SJAG_03879","SJAG_02810","SJAG_02406","SJAG_01694","SJAG_01062","SJAG_00693","SJAG_03143","SJAG_00266","SJAG_03484","SJAG_00698","SJAG_00987","SJAG_01583","SJAG_00210","SJAG_03241","SJAG_01307","SJAG_02218","SJAG_02252","SJAG_04855","SJAG_04249","SJAG_03735","SJAG_04712","SJAG_00802","SJAG_05153","SJAG_03346","SJAG_03183","SJAG_04749","SJAG_04036"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83668,84030,84100,84525,84857,85103,85530,86157,87961,88803,89350,89771,90798,91757,92350,93366,94176,94486,95561,95867,96558,98344,100503,100831,101887,102156,103106,103633,104030,104860,105103,105238,105239,105745,106785,107946,107985,107986,109750,110153,110648,112149,112551,113565,114131],"is_not":false,"summary":null,"term":"GO:0001228"}]},"cv_name":"molecular_function","definition":"A DNA-binding transcription factor activity that activates or increases transcription of specific gene sets transcribed by RNA polymerase II.","definition_xrefs":["PMID:27145859","GOC:aruk","GOC:txnOH-2018","PMID:20737563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor activity, RNA polymerase II-specific","termid":"GO:0000981"},{"relation_name":"is_a","term_name":"DNA-binding transcription activator 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transcription activator activity, RNA polymerase II-specific","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9856548","Reactome:R-HSA-9856604","GO:0001211","GO:0001212","Reactome:R-HSA-9856539","GO:0001209","Reactome:R-HSA-9856549","Reactome:R-HSA-9856550","GO:0001205","Reactome:R-HSA-9856546","GO:0001077","GO:0001213"],"synonyms":[{"name":"RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription","type":"narrow"},{"name":"RNA polymerase II distal enhancer sequence-specific DNA-binding transcription factor activity involved in positive regulation of transcription","type":"narrow"},{"name":"RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription","type":"exact"},{"name":"RNA polymerase II transcriptional activator activity, copper ion regulated proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"RNA polymerase II transcriptional activator activity, metal ion regulated core promoter proximal region sequence-specific binding","type":"narrow"},{"name":"RNA polymerase II transcriptional activator activity, metal ion regulated proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"RNA polymerase II transcriptional activator activity, zinc ion regulated core promoter proximal region sequence-specific binding","type":"narrow"},{"name":"RNA polymerase II transcriptional activator activity, zinc ion regulated proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"copper ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription","type":"narrow"},{"name":"distal enhancer DNA-binding transcription activator activity, RNA polymerase II-specific","type":"narrow"},{"name":"metal ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription","type":"narrow"},{"name":"metal ion regulated sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription","type":"narrow"},{"name":"proximal promoter DNA-binding transcription activator activity, RNA polymerase II-specific","type":"narrow"},{"name":"sequence-specific distal enhancer binding RNA polymerase II transcription factor activity involved in positive regulation of transcription","type":"narrow"},{"name":"transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding","type":"narrow"},{"name":"transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific DNA binding","type":"narrow"},{"name":"transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding","type":"narrow"},{"name":"transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding","type":"exact"},{"name":"transcriptional activator activity, metal ion regulated sequence-specific DNA binding","type":"narrow"},{"name":"zinc ion regulated core promoter proximal region sequence-specific DNA binding RNA polymerase II transcription factor activity involved in positive regulation of transcription","type":"narrow"}],"termid":"GO:0001228","terms_by_termid":{"GO:0001228":null}}


id: GO:0097252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in an oligodendrocyte. Oligodendrocytes belong to a class of large neuroglial (macroglial) cells in the central nervous system, where they form the insulating myelin sheath of axons.","definition_xrefs":["GOC:yaf","GOC:mtg_apoptosis","CL:0000128","PMID:16723520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell apoptotic process","termid":"GO:0034349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oligodendrocyte apoptotic process","synonyms":[{"name":"oligodendrocyte apoptosis","type":"narrow"}],"termid":"GO:0097252"}


id: GO:0016197
data:
  {"annotated_genes":["SJAG_02177","SJAG_03511","SJAG_02511","SJAG_04023","SJAG_03504","SJAG_02277","SJAG_04565","SJAG_02912","SJAG_00632","SJAG_04047","SJAG_05030","SJAG_01135","SJAG_04846","SJAG_04643","SJAG_07012","SJAG_01586","SJAG_04509","SJAG_01448","SJAG_04070","SJAG_04902","SJAG_02282","SJAG_03044","SJAG_00821","SJAG_02823","SJAG_04219","SJAG_01686","SJAG_00900","SJAG_03465","SJAG_04912","SJAG_01309","SJAG_01809","SJAG_00416","SJAG_04936","SJAG_01242","SJAG_01039","SJAG_00669","SJAG_03915","SJAG_05207","SJAG_01382","SJAG_00314","SJAG_02349","SJAG_04349","SJAG_02811","SJAG_02584","SJAG_04489","SJAG_04359","SJAG_01281","SJAG_02750","SJAG_04024","SJAG_02234","SJAG_00299","SJAG_01981","SJAG_02117","SJAG_05303","SJAG_06588","SJAG_03963","SJAG_04112","SJAG_04552","SJAG_01945","SJAG_02753","SJAG_00379","SJAG_04275","SJAG_02193","SJAG_04629","SJAG_03892","SJAG_03783","SJAG_04822","SJAG_01645","SJAG_04609","SJAG_03756","SJAG_02852","SJAG_01598","SJAG_00971","SJAG_03250","SJAG_00287","SJAG_04886","SJAG_00907","SJAG_00143"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67607,90854,96371,98030,98576,108229,108252],"is_not":false,"summary":null,"term":"GO:0016197"},{"annotations":[112505,111293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034498"},{"annotations":[73677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045022"},{"annotations":[105227,111715,108553,72086,95758,100877,96251,111794,108517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032456"},{"annotations":[108847,103422,90951,97188,114949,114564,88330,109072,87342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099638"},{"annotations":[113601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032509"},{"annotations":[108519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034499"},{"annotations":[106264,100188,110942,99207,94924,87685,94747,108632,103180,84678,99797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032511"},{"annotations":[102606,87552,88046,103425,86611,96950,88333,105424,105844,107527,106696,87686,84193,94022,110776,112468,84026,101020,92027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043328"},{"annotations":[83966],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2001135"},{"annotations":[91848,108848,103612,114475,115084,85457,95829,93214,113047,114566,103047,97189,97770,93809,91156,105230,109075,87246,92946,98197,105860,91003,99496,101580,114951,98728,94259,88362,88334,94749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042147"}]},"cv_name":"biological_process","definition":"The directed movement of substances mediated by an endosome, a membrane-bounded organelle that carries materials enclosed in the lumen or located in the endosomal membrane.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"},{"relation_name":"is_a","term_name":"intracellular 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id: GO:0001554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The lysis or structural demise of the corpus luteum. During normal luteolysis, two closely related events occur. First, there is loss of the capacity to synthesize and secrete progesterone (functional luteolysis) followed by loss of the cells that comprise the corpus luteum (structural luteolysis). Preventing luteolysis is crucial to maintain pregnancy.","definition_xrefs":["PMID:10617764"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"part_of","term_name":"female gonad development","termid":"GO:0008585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"luteolysis","secondary_identifiers":["Wikipedia:Luteolysis"],"termid":"GO:0001554"}


id: PBO:0077188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 12, pseudogene","termid":"PBO:0077188"}


id: PBO:0034055
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-determined_by","termid":"PBO:0034055"}


id: PR:P40382
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdt1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle protein cdt1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.18","synonyms":[{"name":"Spom972h-cdt1","type":"exact"}],"termid":"PR:P40382"}


id: PBO:0053506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 489","termid":"PBO:0053506"}


id: PBO:0064884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 scaffold subunit Aalpha","termid":"PBO:0064884"}


id: GO:0016914
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A gonadotrophic glycoprotein hormone secreted, in mammals, by the anterior pituitary gland; consists of alpha and beta subunits, the latter of which confers hormonal specificity.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pituitary gonadotropin complex","termid":"GO:0061696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"follicle-stimulating hormone complex","synonyms":[{"name":"FSH complex","type":"exact"},{"name":"follicle stimulating hormone complex","type":"exact"}],"termid":"GO:0016914"}


id: PBO:0030439
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_tRNA_methylation","termid":"PBO:0030439"}


id: GO:0106044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a sugar or dicarbonyl from a glycated guanine.","definition_xrefs":["PMID:28596309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"guanine deglycation","termid":"GO:0106044"}


id: PBO:0003377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane proteolipid Pmp3","termid":"PBO:0003377"}


id: PBO:0040211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASXL3 divergent transcript","termid":"PBO:0040211"}


id: PR:O94439
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fsc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAS1 domain-containing protein fsc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H12.05c","synonyms":[{"name":"Spom972h-fsc1","type":"exact"}],"termid":"PR:O94439"}


id: PBO:0088353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic tyrosine-tRNA ligase Yrs1","termid":"PBO:0088353"}


id: PBO:0055050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2465","termid":"PBO:0055050"}


id: PBO:0080817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-3' exoribonuclease 2","termid":"PBO:0080817"}


id: PBO:0084207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homeobox transcription factor; regulatory targets include genes involved in phosphate metabolism; binds cooperatively with Pho4p to the PHO5 promoter; phosphorylation of Pho2p facilitates interaction with Pho4p; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0084207"}


id: PBO:0060973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFYC antisense RNA 1","termid":"PBO:0060973"}


id: PBO:0091336
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"The Bioneer strain appears to be incorrect (possibly Pab1 SPAC227.07c)","termid":"PBO:0091336"}


id: PBO:0051016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF2BP2 antisense RNA 1","termid":"PBO:0051016"}


id: PR:O94730
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cmp7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1604.18c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.18c","synonyms":[{"name":"Spom972h-cmp7","type":"exact"}],"termid":"PR:O94730"}


id: PBO:0075504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated serine rich 2","termid":"PBO:0075504"}


id: PATO:0025002
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer being suitable for use as a safe means of hydration.","definition_xrefs":["Wikipedia:https://en.wikipedia.org/wiki/Drinking_water"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potability","termid":"PATO:0025000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potable","synonyms":[{"name":"drinkable","type":"exact"}],"termid":"PATO:0025002"}


id: MOD:00985
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a hydrogen atom of an L-tyrosine residue with a halogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"halogenated tyrosine","synonyms":[{"name":"HalTyr","type":"exact"}],"termid":"MOD:00985"}


id: PBO:0071425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 31","termid":"PBO:0071425"}


id: PBO:0079646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2R2 antisense RNA 1","termid":"PBO:0079646"}


id: GO:0071564
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SWI/SNF-type complex that is found in neural stem or progenitor cells, and in human contains actin and proteins encoded by the ARID1A/BAF250A or ARID1B/BAF250B, SMARCD1/BAF60A, SMARCD3/BAF60C, SMARCA2/BRM/BAF190B, SMARCA4/BRG1/BAF190A, SMARCB1/BAF47, SMARCC1/BAF155, SMARCE1/BAF57, SMARCC2/BAF170, PHF10/BAF45A, ACTL6A/BAF53A genes. The npBAF complex is essential for the self-renewal/proliferative capacity of the multipotent neural stem cells.","definition_xrefs":["GOC:mah","GOC:ss","PMID:17640523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"npBAF complex","termid":"GO:0071564"}


id: GO:0080027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a herbivore.","definition_xrefs":["PMID:18987211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to herbivore","termid":"GO:0080027"}


id: PBO:0058461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5190","termid":"PBO:0058461"}


id: GO:0038079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: protein + ATP = protein phosphate + ADP by a mitogen-activated protein kinase, as part of a MAPK signaling cascade that passes on a signal within an osmosensory signaling pathway.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase activity involved in osmosensory signaling pathway (obsolete GO:0038079)","synonyms":[{"name":"MAP kinase activity involved in osmosensory signalling pathway","type":"exact"},{"name":"MAPK activity involved in osmosensory signaling pathway","type":"exact"}],"termid":"GO:0038079"}


id: PBO:0018158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-galactose transmembrane transporter Gms1","termid":"PBO:0018158"}


id: PR:O74544
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gtr2 gene.","definition_xrefs":["UniProtKB:O74544","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein gtr2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.05","synonyms":[{"name":"Spom972h-gtr2","type":"exact"}],"termid":"PR:O74544"}


id: PBO:0051578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 17 receptor B","termid":"PBO:0051578"}


id: GO:0061520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a Langerhans cell.","definition_xrefs":["PMID:22729249","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid dendritic cell differentiation","termid":"GO:0043011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Langerhans cell differentiation","termid":"GO:0061520"}


id: GO:0002291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a mature or immature T cell resulting from exposure to an antigen for which its T cell receptor is specific bound to an MHC molecule on an antigen presenting cell, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell activation involved in immune response","termid":"GO:0002286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","synonyms":[{"name":"T lymphocyte activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"},{"name":"T-cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"},{"name":"T-lymphocyte activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"}],"termid":"GO:0002291"}


id: PBO:0071622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 40","termid":"PBO:0071622"}


id: PBO:0063819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology like domain family B member 1","termid":"PBO:0063819"}


id: FYPO:0007804
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the ATP hydrolysis-dependent activity that loads H3-H4 histone dimers onto DNA is abnormal.","definition_xrefs":["PomBase:mah","PMID:31848341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"},{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000002","FYPO:0005447","FYPO:0000641","FYPO:0000652"],"is_obsolete":false,"name":"abnormal H3-H4 dimer loading onto DNA","synonyms":[{"name":"abnormal H3-H4 dimer loading activity","type":"exact"},{"name":"abnormal histone H3-H4 dimer loading activity","type":"exact"}],"termid":"FYPO:0007804"}


id: MOD:00356
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(4a-FMN)-L-cysteine.","definition_xrefs":["RESID:AA0351","PubMed:12668455","PubMed:12846567","PubMed:7692961","Unimod:443#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FMN modified residue","termid":"MOD:00896"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(4a-FMN)-L-cysteine","synonyms":[{"name":"(R)-2-amino-3-(4a-riboflavin 5'-dihydrogen phosphate)sulfanylpropanoic acid","type":"exact"},{"name":"4a-(S-cysteinyl)FMN","type":"exact"},{"name":"4a-(S-cysteinyl)flavin mononucleotide","type":"exact"},{"name":"FMNC","type":"related"},{"name":"MOD_RES S-4a-FMN cysteine","type":"exact"},{"name":"S-(4a-FMN)","type":"related"},{"name":"S-(4a-FMN)-L-cysteine","type":"exact"},{"name":"S4aFMNCys","type":"exact"}],"termid":"MOD:00356"}


id: GO:0010114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a red light stimulus. Red light is electromagnetic radiation of wavelength of 580-700nm. An example of this response is seen at the beginning of many plant species developmental stages. These include germination, and the point when cotyledon expansion is triggered. In certain species these processes take place in response to absorption of red light by the pigment molecule phytochrome, but the signal can be reversed by exposure to far red light. During the initial phase the phytochrome molecule is only present in the red light absorbing form, but on absorption of red light it changes to a far red light absorbing form, triggering progress through development. An immediate short period of exposure to far red light entirely returns the pigment to its initial state and prevents triggering of the developmental process. A thirty minute break between red and subsequent far red light exposure renders the red light effect irreversible, and development then occurs regardless of whether far red light exposure subsequently occurs.","definition_xrefs":["GOC:mtg_far_red","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to red or far red light","termid":"GO:0009639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to red light","synonyms":[{"name":"response to red light stimulus","type":"exact"}],"termid":"GO:0010114"}


id: GO:0047384
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + [hydroxymethylglutaryl-CoA reductase (NADPH)] phosphate = phosphate + [hydroxymethylglutaryl-CoA reductase (NADPH)].","definition_xrefs":["MetaCyc:3.1.3.47-RXN","EC:3.1.3.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0004721","GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"[hydroxymethylglutaryl-CoA reductase (NADPH)]-phosphatase activity","synonyms":[{"name":"hydroxymethylglutaryl-CoA reductase (NADPH)-phosphatase activity","type":"related"},{"name":"hydroxymethylglutaryl-CoA reductase (NADPH)-phosphate phosphohydrolase activity","type":"related"},{"name":"reductase phosphatase activity","type":"broad"}],"termid":"GO:0047384"}


id: PBO:0073481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serum/glucocorticoid regulated kinase 2","termid":"PBO:0073481"}


id: PBO:0089754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin 13","termid":"PBO:0089754"}


id: PBO:0066476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFK pseudogene 3","termid":"PBO:0066476"}


id: PATO:0002016
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative","termid":"PATO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magnitude","termid":"PATO:0002016"}


id: GO:0120106
data:
  {"annotated_genes":["SJAG_02266","SJAG_03088","SJAG_03703","SJAG_01665","SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[96589,96757,101187,105112,113945],"is_not":false,"summary":null,"term":"GO:0120106"}]},"cv_name":"cellular_component","definition":"The region of the mitotic actomyosin ring containing actin filaments and cross linkers, myosin motors, and connections to the plasma membrane through the intermediate layer. It is further from the plasma membrane than the intermediate layer which it is adjacent to.","definition_xrefs":["PMID:28914606","GOC:krc","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitotic actomyosin contractile ring","termid":"GO:0110085"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01665":null,"SJAG_02266":null,"SJAG_03088":null,"SJAG_03145":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0070938"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0070938","GO:0015629","GO:0005938","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"mitotic actomyosin contractile ring, distal actin filament layer","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actomyosin contractile ring, distal actin filament layer","type":"exact"}],"termid":"GO:0120106","terms_by_termid":{"GO:0120106":null}}


id: GO:0035713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrogen dioxide (NO2) stimulus.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nitrogen dioxide","synonyms":[{"name":"response to NO2","type":"exact"}],"termid":"GO:0035713"}


id: PBO:0068613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 64, pseudogene","termid":"PBO:0068613"}


id: GO:0008727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-alpha-D-mannose + H2O = GDP + D-mannose + H+.","definition_xrefs":["MetaCyc:GDPMANMANHYDRO-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosidase activity","termid":"GO:0015923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"GDP-mannose mannosyl hydrolase activity","secondary_identifiers":["RHEA:28102"],"termid":"GO:0008727"}


id: GO:0015538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sialate(out) + H+(out) = sialate(in) + H+(in).","definition_xrefs":["TC:2.A.1.12.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialic acid transmembrane transporter activity","termid":"GO:0015136"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"sialic acid:proton symporter activity","secondary_identifiers":["MetaCyc:TRANS-RXN-25","Reactome:R-HSA-428585","RHEA:28987","Reactome:R-HSA-5624239"],"synonyms":[{"name":"sialic acid permease activity","type":"related"},{"name":"sialic acid:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015538"}


id: PBO:0068121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 428","termid":"PBO:0068121"}


id: GO:0102531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + an ecdysteroid 22-phosphate = hydrogenphosphate + an ecdysteroid.","definition_xrefs":["GOC:pz","PMID:12721294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ecdysteroid-phosphate phosphatase activity","secondary_identifiers":["MetaCyc:RXN-14734","RHEA:63576"],"termid":"GO:0102531"}


id: PBO:0075607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPON1 antisense RNA 1","termid":"PBO:0075607"}


id: GO:0071716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of leukotrienes into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Leukotrienes are linear C20 endogenous metabolites of arachidonic acid (icosa-5,8,11,14-tetraenoic acid) containing a terminal carboxy function and four or more double bonds (three or more of which are conjugated) as well as other functional groups.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid transport","termid":"GO:0071715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"leukotriene transport","termid":"GO:0071716"}


id: GO:0018979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving trichloroethylene, a toxic, colorless, photoreactive, chlorinated hydrocarbon liquid, commonly used as a metal degreaser and solvent.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorinated hydrocarbon metabolic process","termid":"GO:0042196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trichloroethylene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:tce"],"synonyms":[{"name":"TCE metabolic process","type":"exact"},{"name":"TCE metabolism","type":"exact"},{"name":"trichloroethene metabolic process","type":"exact"},{"name":"trichloroethene metabolism","type":"exact"},{"name":"trichloroethylene metabolism","type":"exact"}],"termid":"GO:0018979"}


id: PBO:0083500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YOR083W","termid":"PBO:0083500"}


id: PBO:0071438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 44","termid":"PBO:0071438"}


id: MOD:01504
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Applied Biosystems iTRAQ4plex-116 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-116 reporter+balance reagent acylated residue","termid":"MOD:01499"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ4plex-116 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex","type":"related"}],"termid":"MOD:01504"}


id: PBO:0079246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 21A","termid":"PBO:0079246"}


id: GO:1990684
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A macromolecular complex containing separate protein, lipid and RNA molecules. Separate in this context means not covalently bound to each other.","definition_xrefs":["PMID:21423178","GOC:vesicles","PMID:23559634","PMID:22028337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein-lipid-RNA complex","synonyms":[{"name":"miRNA-lipoprotein complex","type":"related"}],"termid":"GO:1990684"}


id: GO:0120113
data:
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id: GO:0031326
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id: GO:0005546
data:
  {"annotated_genes":["SJAG_00118","SJAG_02166","SJAG_04960","SJAG_02572","SJAG_01748","SJAG_00368","SJAG_01143","SJAG_02657","SJAG_00117","SJAG_05179","SJAG_04644"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84061,86808,95350,97818,97828,97980,102072,102641,110952,113117,115044],"is_not":false,"summary":null,"term":"GO:0005546"}]},"cv_name":"molecular_function","definition":"Binding to phosphatidylinositol-4,5-bisphosphate, a derivative of phosphatidylinositol in which the inositol ring is phosphorylated at the 4' and 5' positions.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"phosphatidylinositol bisphosphate binding","termid":"GO:1902936"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00117":null,"SJAG_00118":null,"SJAG_00368":null,"SJAG_01143":null,"SJAG_01748":null,"SJAG_02166":null,"SJAG_02572":null,"SJAG_02657":null,"SJAG_04644":null,"SJAG_04960":null,"SJAG_05179":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"phosphatidylinositol-4,5-bisphosphate binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate binding","type":"exact"},{"name":"PIP2 binding","type":"broad"},{"name":"PtdIns(4,5)P2 binding","type":"exact"},{"name":"phosphatidylinositol 4,5-bisphosphate binding","type":"exact"}],"termid":"GO:0005546","terms_by_termid":{"GO:0005546":null}}


id: PBO:0038712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 7","termid":"PBO:0038712"}


id: PBO:0056557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance complex component 5","termid":"PBO:0056557"}


id: PBO:0046396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythrocyte membrane protein band 4.1 like 2","termid":"PBO:0046396"}


id: GO:0033672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of NAD kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to an NAD molecule.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of NAD+ kinase activity (obsolete GO:0033672)","synonyms":[{"name":"NAD+ kinase activator","type":"narrow"},{"name":"stimulation of NAD+ kinase activity","type":"narrow"},{"name":"up regulation of NAD+ kinase activity","type":"exact"},{"name":"up-regulation of NAD+ kinase activity","type":"exact"},{"name":"upregulation of NAD+ kinase activity","type":"exact"}],"termid":"GO:0033672"}


id: PBO:0078843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon TGG) 5-1","termid":"PBO:0078843"}


id: PBO:0062995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl arginine deiminase 1","termid":"PBO:0062995"}


id: FYPO:0006466
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004205"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature non-coding RNA (ncRNA) measured in a cell is lower than normal. Total ncRNA or a specific ncRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered mature ncRNA level during vegetative growth","termid":"FYPO:0006465"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":1,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased mature ncRNA level","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"decreased mature ncRNA accumulation","type":"related"},{"name":"decreased mature ncRNA level during mitotic cell cycle","type":"related"},{"name":"decreased mature ncRNA level during vegetative growth","type":"exact"},{"name":"decreased mature ncRNA transcript level","type":"exact"},{"name":"decreased mature non-coding RNA level","type":"exact"},{"name":"decreased ncRNA level","type":"broad"},{"name":"reduced mature ncRNA level","type":"exact"}],"termid":"FYPO:0006466","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004205":null,"FYPO_EXT:0000001":null}}


id: PR:O94596
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC622.06c gene.","definition_xrefs":["UniProtKB:O94596","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C622.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC622.06c","synonyms":[{"name":"Spom972h-SPCC622.06c","type":"exact"}],"termid":"PR:O94596"}


id: PBO:0045184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B5","termid":"PBO:0045184"}


id: SO:0000990
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Small non-coding RNA (55-65 nt long) containing highly conserved 5' and 3' ends (16 and 8 nt, respectively) that are predicted to come together to form a stem structure. Identified in the social amoeba Dictyostelium discoideum and localized in the cytoplasm.","definition_xrefs":["PMID:15333696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"class_I_RNA","synonyms":[{"name":"class I RNA","type":"exact"}],"termid":"SO:0000990"}


id: GO:1902111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diethyl maleate stimulus.","definition_xrefs":["GOC:TermGenie","PMID:12100563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to diethyl maleate","termid":"GO:1902111"}


id: FYPO:0001814
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which cell population growth is normal (i.e. indistinguishable from wild type) under iron starvation conditions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell population growth","termid":"FYPO:0000047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0002057","FYPO:0000257","FYPO:0002058"],"is_obsolete":false,"name":"normal cell population growth during iron starvation","synonyms":[{"name":"normal cell population growth during iron depletion","type":"exact"},{"name":"normal cell population growth during iron deprivation","type":"exact"},{"name":"normal growth during iron starvation","type":"broad"}],"termid":"FYPO:0001814"}


id: PBO:0083825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the Dam1 complex (aka DASH complex); couples kinetochores to the force produced by MT depolymerization thereby aiding in chromosome segregation; phosphorylated during the cell cycle by cyclin-dependent kinases; sumoylated in an Mms21p-dependent manner; protein abundance increases in response to DNA replication stress","termid":"PBO:0083825"}


id: PBO:0028971
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-excess_Golgi_cisternae_present","termid":"PBO:0028971"}


id: PBO:0066083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 11","termid":"PBO:0066083"}


id: GO:1903645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of chaperone-mediated protein folding.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24375412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein folding","termid":"GO:1903333"},{"relation_name":"is_a","term_name":"regulation of chaperone-mediated protein folding","termid":"GO:1903644"},{"relation_name":"negatively_regulates","term_name":"chaperone-mediated protein folding","termid":"GO:0061077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006457"},{"rel_name":"negatively_regulates","termid":"GO:0006457"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006457"],"is_obsolete":false,"name":"negative regulation of chaperone-mediated protein folding","synonyms":[{"name":"down regulation of chaperone-mediated protein folding","type":"exact"},{"name":"down-regulation of chaperone-mediated protein folding","type":"exact"},{"name":"downregulation of chaperone-mediated protein folding","type":"exact"},{"name":"inhibition of chaperone-mediated protein folding","type":"narrow"}],"termid":"GO:1903645"}


id: PBO:0036303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ThrE amino acid transmembrane transporter family protein","termid":"PBO:0036303"}


id: PBO:0081993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 23","termid":"PBO:0081993"}


id: PBO:0091791
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clotrimazole-sensitive","termid":"PBO:0091791"}


id: PATO:0000157
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000157 absolute temporal (obsolete PATO:0000157)","termid":"PATO:0000157"}


id: PBO:0073129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC14 like 1 pseudogene 1","termid":"PBO:0073129"}


id: GO:0035859
data:
  {"annotated_genes":["SJAG_01184","SJAG_00209","SJAG_04496","SJAG_03907","SJAG_02765","SJAG_02424","SJAG_00561","SJAG_00824"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84087],"is_not":false,"summary":null,"term":"GO:0035859"},{"annotations":[107012,84085,103450,90229],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990130"},{"annotations":[84086,85478,94067,102611,84379],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061700"}]},"cv_name":"cellular_component","definition":"A GTPase-activating protein (GAP) complex that regulates TORC1 signaling by interacting with the Rag GTPase. In S. cerevisiae the complex contains Seh1p, Sec13p, Npr2p, Npr3p, Iml1p, Mtc5p, Rtc1p, and Sea4p.","definition_xrefs":["PMID:21454883","GOC:jh","PMID:23974112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00209":null,"SJAG_00561":null,"SJAG_00824":null,"SJAG_01184":null,"SJAG_02424":null,"SJAG_02765":null,"SJAG_03907":null,"SJAG_04496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Seh1-associated complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GATOR complex","type":"exact"},{"name":"SEA complex","type":"exact"}],"termid":"GO:0035859","terms_by_termid":{"GO:0035859":null,"GO:0061700":null,"GO:1990130":null}}


id: GO:0106159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent small RNA loading onto RISC.","definition_xrefs":["GOC:ha","PMID:29775584"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of small RNA loading onto RISC (obsolete GO:0106159)","termid":"GO:0106159"}


id: PBO:0036147
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K36_methylation_during_vegetative_growth","termid":"PBO:0036147"}


id: PBO:0070774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 4","termid":"PBO:0070774"}


id: GO:0010222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vascular tissue pattern formation as it occurs in the stem of vascular plants.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylem and phloem pattern formation","termid":"GO:0010051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stem vascular tissue pattern formation","termid":"GO:0010222"}


id: CHEBI:46245
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q10","termid":"CHEBI:46245"}


id: GO:0141056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of ubiquitin to a histone H4 substrate.","definition_xrefs":["PMID:25303536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone ubiquitin ligase activity","termid":"GO:0140852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004842"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016740","GO:0019787","GO:0003674","GO:0004842","GO:0016746"],"is_obsolete":false,"name":"histone H4 ubiquitin ligase activity","termid":"GO:0141056"}


id: GO:0030629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a U6 small nuclear RNA (U6 snRNA) at the 3' end.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U6 snRNA binding","termid":"GO:0017070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"U6 snRNA 3'-end binding","synonyms":[{"name":"U6 snRNA 3' end binding","type":"exact"}],"termid":"GO:0030629"}


id: GO:0048195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a membrane priming complex. An incoming coat component recognizes both GTPase and a membrane protein to form the priming complex.","definition_xrefs":["GOC:jid","ISBN:0716731363","PMID:10219233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"Golgi transport vesicle coating","termid":"GO:0048200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0065003","GO:0044085","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"Golgi membrane priming complex assembly","synonyms":[{"name":"formation of Golgi membrane priming complex","type":"exact"},{"name":"formation of dictyosome membrane priming complex","type":"narrow"}],"termid":"GO:0048195"}


id: PBO:0066836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 135","termid":"PBO:0066836"}


id: SO:0001849
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A core promoter element that has the consensus sequence ACCCTACCCT (or its inverted form AGGGTAGGGT), and is found near the homol D box in some promoters that use a homol D box instead of a canonical TATA sequence.","definition_xrefs":["PMID:7501449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homol_E_box","synonyms":[{"name":"homol E box","type":"exact"}],"termid":"SO:0001849"}


id: GO:0140671
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A chromatin remodeling complex that regulates transcription via acetylation primarily of nucleosomal histones H3 and H2B. In budding yeast shares the histone acetylation (HAT) module of ADA2-GCN5-NGG1-SGF29 with the related SAGA complex.","definition_xrefs":["GOC:bhm","PMID:21734642","PMID:28966424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SAGA-type complex","termid":"GO:0070461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ADA complex","synonyms":[{"name":"ADA HAT complex","type":"exact"},{"name":"ADA histone acetyltransferase complex","type":"exact"},{"name":"Ada2/Gcn5/Ada3 transcription activator complex","type":"related"},{"name":"scADA","type":"narrow"}],"termid":"GO:0140671"}


id: PBO:0052101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily A member 4","termid":"PBO:0052101"}


id: GO:0090174
data:
  {"annotated_genes":["SJAG_01697","SJAG_01324","SJAG_03848","SJAG_03889","SJAG_04739","SJAG_02315","SJAG_03347","SJAG_02595","SJAG_00204","SJAG_00810","SJAG_04023","SJAG_03552","SJAG_04978","SJAG_01633","SJAG_03403","SJAG_04513","SJAG_00430","SJAG_00557","SJAG_02587","SJAG_02241","SJAG_03670","SJAG_05184","SJAG_00171","SJAG_01379","SJAG_00380","SJAG_00826","SJAG_03536"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016320"},{"annotations":[86238,95569,95774,97176,112977,90376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034058"},{"annotations":[92009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048210"},{"annotations":[84593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048288"},{"annotations":[101758],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035493"},{"annotations":[104740,108747,97141,103442,96908,86634,95962,96278,105709,113586,94162,113625,114604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006906"},{"annotations":[91617,104083,113696,105862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048280"}]},"cv_name":"biological_process","definition":"The joining of two lipid bilayers to form a single organelle membrane.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle fusion","termid":"GO:0048284"},{"relation_name":"is_a","term_name":"membrane fusion","termid":"GO:0061025"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00171":null,"SJAG_00204":null,"SJAG_00380":null,"SJAG_00430":null,"SJAG_00557":null,"SJAG_00810":null,"SJAG_00826":null,"SJAG_01324":null,"SJAG_01379":null,"SJAG_01633":null,"SJAG_01697":null,"SJAG_02241":null,"SJAG_02315":null,"SJAG_02587":null,"SJAG_02595":null,"SJAG_03347":null,"SJAG_03403":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03670":null,"SJAG_03848":null,"SJAG_03889":null,"SJAG_04023":null,"SJAG_04513":null,"SJAG_04739":null,"SJAG_04978":null,"SJAG_05184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"organelle membrane fusion","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090174","terms_by_termid":{"GO:0006906":null,"GO:0016320":null,"GO:0034058":null,"GO:0035493":null,"GO:0048210":null,"GO:0048280":null,"GO:0048288":null}}


id: GO:0097428
data:
  {"annotated_genes":["SJAG_03222","SJAG_02866","SJAG_03532","SJAG_02497","SJAG_03913","SJAG_03701","SJAG_02745","SJAG_02895","SJAG_01417","SJAG_04016","SJAG_01147","SJAG_00040","SJAG_02474"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96545,113929],"is_not":false,"summary":null,"term":"GO:0097428"},{"annotations":[97668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106034"},{"annotations":[83714,85031,110830,100336,100816,91710,112188,96094,113089,105915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106035"}]},"cv_name":"biological_process","definition":"The transfer of an assembled iron-sulfur cluster from a scaffold protein to an acceptor protein that contributes to the attainment of the full functional capacity of a protein.","definition_xrefs":["PMID:18322036","PMID:11939799","PMID:21977977","GOC:mah","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00040":null,"SJAG_01147":null,"SJAG_01417":null,"SJAG_02474":null,"SJAG_02497":null,"SJAG_02745":null,"SJAG_02866":null,"SJAG_02895":null,"SJAG_03222":null,"SJAG_03532":null,"SJAG_03701":null,"SJAG_03913":null,"SJAG_04016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"protein maturation by iron-sulfur cluster transfer","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097428","terms_by_termid":{"GO:0097428":null,"GO:0106034":null,"GO:0106035":null}}


id: PBO:0056537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial coiled-coil domain 1 pseudogene 2","termid":"PBO:0056537"}


id: PBO:0079347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 31, pseudogene","termid":"PBO:0079347"}


id: PBO:0076645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 2","termid":"PBO:0076645"}


id: GO:0035115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the forelimb are generated and organized. The forelimbs are the front limbs of an animal, e.g. the arms of a human.","definition_xrefs":["ISBN:0198612001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic limb morphogenesis","termid":"GO:0030326"},{"relation_name":"is_a","term_name":"forelimb morphogenesis","termid":"GO:0035136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic forelimb morphogenesis","secondary_identifiers":["GO:0035117"],"synonyms":[{"name":"embryonic arm morphogenesis","type":"narrow"}],"termid":"GO:0035115"}


id: PBO:0077981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon TGC) 3-2","termid":"PBO:0077981"}


id: PBO:0086235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that interacts with the CCT complex to stimulate actin folding; has similarity to phosducins; null mutant lethality is complemented by mouse phosducin-like protein MgcPhLP; CCT is short for chaperonin containing TCP-1; essential gene","termid":"PBO:0086235"}


id: GO:0061370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of testosterone, an androgen having 17beta-hydroxy and 3-oxo groups, together with unsaturation at C-4 C-5.","definition_xrefs":["GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"testosterone biosynthetic process","termid":"GO:0061370"}


id: PBO:0072890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SBNO1 antisense RNA 1","termid":"PBO:0072890"}


id: PBO:0059293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L44","termid":"PBO:0059293"}


id: GO:0044314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 27 of the ubiquitin monomers, is added to a protein.","definition_xrefs":["PMID:19345326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polyubiquitination","termid":"GO:0000209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"protein K27-linked ubiquitination","synonyms":[{"name":"protein K27-linked polyubiquitination","type":"exact"}],"termid":"GO:0044314"}


id: PBO:0058596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6728","termid":"PBO:0058596"}


id: PBO:0031591
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_process","termid":"PBO:0031591"}


id: PBO:0068789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 26, pseudogene","termid":"PBO:0068789"}


id: PBO:0079254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 24","termid":"PBO:0079254"}


id: GO:0043240
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of the Fanconi anaemia (FA) proteins including A, C, E, G and F (FANCA-F). Functions in the activation of the downstream protein FANCD2 by monoubiquitylation, and is essential for protection against chromosome breakage.","definition_xrefs":["GOC:jl","PMID:12093742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"Fanconi anaemia nuclear complex","synonyms":[{"name":"FA complex","type":"exact"},{"name":"FA core complex","type":"exact"},{"name":"FA nuclear complex","type":"exact"},{"name":"Fanconi anaemia complex","type":"exact"}],"termid":"GO:0043240"}


id: PBO:0059842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosome associated GTPase 2","termid":"PBO:0059842"}


id: GO:0075138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of the symbiont or its cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detecting oxygen tension in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to host","termid":"GO:0075136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to host oxygen tension environment","synonyms":[{"name":"response of symbiont to host oxygen tension environment","type":"exact"}],"termid":"GO:0075138"}


id: GO:0102727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: campest-4-en-3beta-ol + NAD = campest-4-en-3-one + NADH + H+.","definition_xrefs":["EC:1.1.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"3beta-hydroxysteroid dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-710"],"termid":"GO:0102727"}


id: PBO:0049648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 2","termid":"PBO:0049648"}


id: GO:0005874
data:
  {"annotated_genes":["SJAG_00140","SJAG_02761","SJAG_02695","SJAG_05220","SJAG_01613","SJAG_02509","SJAG_02286","SJAG_01215","SJAG_04841","SJAG_02045","SJAG_00918","SJAG_00655","SJAG_00723","SJAG_01546","SJAG_02336","SJAG_03052","SJAG_01330","SJAG_04745","SJAG_02384","SJAG_00030","SJAG_03540","SJAG_02656","SJAG_04003","SJAG_00113","SJAG_01224","SJAG_00845","SJAG_00332","SJAG_03073","SJAG_01297","SJAG_01196","SJAG_00930","SJAG_00773","SJAG_05266","SJAG_02040","SJAG_01837","SJAG_02624","SJAG_01775","SJAG_04387","SJAG_03264","SJAG_02848","SJAG_00851"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85017,92829,96014,98822,100944,104897,108187,115176],"is_not":false,"summary":null,"term":"GO:0005874"},{"annotations":[100075,95264,87423,103262,103473,108185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000235"},{"annotations":[104295,94673,97475,99945,95265,87425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055028"},{"annotations":[99810,91261,93631],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903754"},{"annotations":[114197,95266,87194,114712,91262,97476,96426,103474,108820,87426,99812,93035,85681,103263,110102],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005881"},{"annotations":[93339],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0062194"},{"annotations":[96428,99947,99813,93036,85682,98380,114713,110103],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904511"},{"annotations":[83823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990574"},{"annotations":[99814,110107,93038],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990752"},{"annotations":[96431,95270],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036449"},{"annotations":[84653,100695,114201,115662,95272,87428],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035371"},{"annotations":[104301,87429,99953,99604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061673"},{"annotations":[93039],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905721"},{"annotations":[103552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990941"},{"annotations":[97480,114719,102359,96433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990498"},{"annotations":[95275,94677,114203,103553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990537"},{"annotations":[87432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005880"},{"annotations":[90824,95277,97483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005827"},{"annotations":[97484,93040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905759"},{"annotations":[87434],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905760"},{"annotations":[96578,110161,112746,74528,99763,85811,93349,103477,108189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005876"}]},"cv_name":"cellular_component","definition":"Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.","definition_xrefs":["ISBN:0879693568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymeric cytoskeletal fiber","termid":"GO:0099513"},{"relation_name":"part_of","term_name":"microtubule cytoskeleton","termid":"GO:0015630"}],"gene_count":41,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00113":null,"SJAG_00140":null,"SJAG_00332":null,"SJAG_00655":null,"SJAG_00723":null,"SJAG_00773":null,"SJAG_00845":null,"SJAG_00851":null,"SJAG_00918":null,"SJAG_00930":null,"SJAG_01196":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01775":null,"SJAG_01837":null,"SJAG_02040":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02336":null,"SJAG_02384":null,"SJAG_02509":null,"SJAG_02624":null,"SJAG_02656":null,"SJAG_02695":null,"SJAG_02761":null,"SJAG_02848":null,"SJAG_03052":null,"SJAG_03073":null,"SJAG_03264":null,"SJAG_03540":null,"SJAG_04003":null,"SJAG_04387":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_05220":null,"SJAG_05266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"microtubule","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21802294":null,"PMID:30726171":null},"secondary_identifiers":["NIF_Subcellular:sao1846835077","Wikipedia:Microtubule"],"synonyms":[{"name":"microtubuli","type":"exact"},{"name":"microtubulus","type":"exact"},{"name":"neurotubule","type":"narrow"}],"termid":"GO:0005874","terms_by_termid":{"GO:0000235":null,"GO:0005827":null,"GO:0005874":null,"GO:0005876":null,"GO:0005880":null,"GO:0005881":null,"GO:0035371":null,"GO:0036449":null,"GO:0055028":null,"GO:0061673":null,"GO:0062194":null,"GO:1903754":null,"GO:1904511":null,"GO:1905721":null,"GO:1905759":null,"GO:1905760":null,"GO:1990498":null,"GO:1990537":null,"GO:1990574":null,"GO:1990752":null,"GO:1990941":null}}


id: GO:0035361
data:
  {"annotated_genes":["SJAG_04142","SJAG_02837","SJAG_03728","SJAG_04971"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78178,93553,95430,107273],"is_not":false,"summary":null,"term":"GO:0035361"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul8 subfamily and a RING domain protein form the catalytic core. In S. cerevisiae, Mms1p acts as the adaptor protein and substrate specificity is conferred by any of a number of different proteins.","definition_xrefs":["PMID:20139071","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02837":null,"SJAG_03728":null,"SJAG_04142":null,"SJAG_04971":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Cul8-RING ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0035361","terms_by_termid":{"GO:0035361":null}}


id: PBO:0054161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1530","termid":"PBO:0054161"}


id: PBO:0052738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 30","termid":"PBO:0052738"}


id: GO:1901372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any trehalose biosynthetic process that is involved in ascospore formation.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete trehalose biosynthetic process involved in ascospore formation (obsolete GO:1901372)","synonyms":[{"name":"mycose biosynthesis involved in ascospore biosynthesis","type":"exact"},{"name":"mycose biosynthesis involved in ascospore formation","type":"exact"},{"name":"mycose biosynthetic process involved in ascospore biosynthesis","type":"exact"},{"name":"mycose biosynthetic process involved in ascospore formation","type":"exact"},{"name":"mykose biosynthesis involved in ascospore biosynthesis","type":"exact"},{"name":"mykose biosynthesis involved in ascospore formation","type":"exact"},{"name":"mykose biosynthetic process involved in ascospore biosynthesis","type":"exact"},{"name":"mykose biosynthetic process involved in ascospore formation","type":"exact"},{"name":"trehalose anabolism involved in ascospore biosynthesis","type":"exact"},{"name":"trehalose anabolism involved in ascospore formation","type":"exact"},{"name":"trehalose biosynthesis involved in ascospore biosynthesis","type":"exact"},{"name":"trehalose biosynthesis involved in ascospore formation","type":"exact"},{"name":"trehalose biosynthetic process involved in ascospore biosynthesis","type":"exact"},{"name":"trehalose formation involved in ascospore biosynthesis","type":"exact"},{"name":"trehalose formation involved in ascospore formation","type":"exact"},{"name":"trehalose synthesis involved in ascospore biosynthesis","type":"exact"},{"name":"trehalose synthesis involved in ascospore formation","type":"exact"}],"termid":"GO:1901372"}


id: PBO:0082756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the septin ring that is required for cytokinesis; present at the ends of rod-like septin hetero-oligomers; C-terminal extension is important for recruitment of Bni5p to the mother-bud neck, which in turn is required for Myo1p recruitment and cytokinesis; undergoes sumoylation and phosphorylation during mitosis; protein abundance increases in response to DNA replication stress","termid":"PBO:0082756"}


id: PBO:0068156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 463","termid":"PBO:0068156"}


id: PBO:0031424
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_phenotype","termid":"PBO:0031424"}


id: PBO:0049022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPN-loop GTPase 3 pseudogene 1","termid":"PBO:0049022"}


id: GO:0003094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which plasma is filtered through the glomerular membrane which consists of capillary endothelial cells, the basement membrane, and epithelial cells. The glomerular filtrate is the same as plasma except it has no significant amount of protein.","definition_xrefs":["ISBN:0721643949","GOC:mtg_cardio","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal filtration","termid":"GO:0097205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerular filtration","termid":"GO:0003094"}


id: PR:O59813
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC794.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized amino-acid permease C794.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.03","synonyms":[{"name":"Spom972h-SPCC794.03","type":"exact"}],"termid":"PR:O59813"}


id: SO:0000908
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a feature that has been predicted using sequence similarity of a known domain.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supported_by_sequence_similarity","termid":"SO:0000907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"supported_by_domain_match","synonyms":[{"name":"supported by domain match","type":"exact"}],"termid":"SO:0000908"}


id: GO:0050444
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 cob(II)alamin + NADP+ = 2 aquacob(III)alamin + NADPH + H+.","definition_xrefs":["EC:1.16.1.5","MetaCyc:AQUACOBALAMIN-REDUCTASE-NADPH-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete aquacobalamin reductase (NADPH) activity (obsolete GO:0050444)","secondary_identifiers":["RHEA:20752"],"synonyms":[{"name":"NADPH-linked aquacobalamin reductase activity","type":"related"},{"name":"NADPH2:aquacob(III)alamin oxidoreductase activity","type":"related"},{"name":"NADPH:aquacob(III)alamin oxidoreductase activity","type":"related"},{"name":"aquacobalamin (reduced nicotinamide adenine dinucleotide phosphate) activity","type":"related"},{"name":"aquacobalamin (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"related"},{"name":"cob(II)alamin:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050444"}


id: _global:regulates_o_transports_or_maintains_localization_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_o_transports_or_maintains_localization_of","secondary_identifiers":["GOREL:0000038"],"termid":"_global:regulates_o_transports_or_maintains_localization_of"}


id: PBO:0028855
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_during_glucose_starvation","termid":"PBO:0028855"}


id: PBO:0085335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylserine synthase; functions in phospholipid biosynthesis; transcriptionally repressed by myo-inositol and choline","termid":"PBO:0085335"}


id: GO:0047951
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-acylglutathione + H2O = a carboxylate + glutathione + H+.","definition_xrefs":["EC:3.1.2.7","RHEA:22708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolester hydrolase activity","termid":"GO:0016790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"glutathione thiolesterase activity","secondary_identifiers":["KEGG_REACTION:R00547","MetaCyc:GLUTATHIONE-THIOESTERASE-RXN"],"synonyms":[{"name":"S-acylglutathione hydrolase activity","type":"related"},{"name":"citryl-glutathione thioesterhydrolase activity","type":"related"},{"name":"glutathione thioesterase activity","type":"exact"}],"termid":"GO:0047951"}


id: PBO:0078597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 10, Y-linked","termid":"PBO:0078597"}


id: PATO:0001818
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's increasing over time.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive","termid":"PATO:0001818"}


id: GO:2000334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood microparticle formation.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of blood microparticle formation","termid":"GO:2000332"},{"relation_name":"positively_regulates","term_name":"blood microparticle formation","termid":"GO:0072564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood microparticle formation","synonyms":[{"name":"positive regulation of microparticle generation","type":"exact"},{"name":"positive regulation of microparticle release","type":"exact"}],"termid":"GO:2000334"}


id: PBO:0068364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 146","termid":"PBO:0068364"}


id: PBO:0077745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of EGR1, exonuclease","termid":"PBO:0077745"}


id: PBO:0050172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 28","termid":"PBO:0050172"}


id: GO:0099077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"DNA-binding activity that is dependent on binding to a histone.","definition_xrefs":["PMID:11691835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"histone-dependent DNA binding","termid":"GO:0099077"}


id: PBO:0000808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMT family","termid":"PBO:0000808"}


id: PBO:0061756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"out at first homolog","termid":"PBO:0061756"}


id: GO:0032008
data:
  {"annotated_genes":["SJAG_03907","SJAG_03371","SJAG_00457","SJAG_04910","SJAG_04496","SJAG_02605","SJAG_06588","SJAG_00143","SJAG_02424","SJAG_03405","SJAG_00209","SJAG_00561","SJAG_02231","SJAG_05030","SJAG_03089","SJAG_05184"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101177,102615],"is_not":false,"summary":null,"term":"GO:0032008"},{"annotations":[106597,108925,85485,94070,84091,90378,103203,84381,92161,114432,105318],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904263"},{"annotations":[93808,103046,87245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904515"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of TOR signaling.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of TOR signaling","termid":"GO:0032006"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"TOR signaling","termid":"GO:0031929"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00143":null,"SJAG_00209":null,"SJAG_00457":null,"SJAG_00561":null,"SJAG_02231":null,"SJAG_02424":null,"SJAG_02605":null,"SJAG_03089":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_03907":null,"SJAG_04496":null,"SJAG_04910":null,"SJAG_05030":null,"SJAG_05184":null,"SJAG_06588":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of TOR signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of TOR signaling pathway","type":"narrow"},{"name":"positive regulation of TOR signaling cascade","type":"related"},{"name":"positive regulation of TOR signaling pathway","type":"exact"},{"name":"positive regulation of TOR signalling pathway","type":"exact"},{"name":"positive regulation of target of rapamycin signaling pathway","type":"exact"},{"name":"positive regulation of target of rapamycin signalling pathway","type":"exact"},{"name":"stimulation of TOR signaling pathway","type":"narrow"},{"name":"up regulation of TOR signaling pathway","type":"exact"},{"name":"up-regulation of TOR signaling pathway","type":"exact"},{"name":"upregulation of TOR signaling pathway","type":"exact"}],"termid":"GO:0032008","terms_by_termid":{"GO:0032008":null,"GO:1904263":null,"GO:1904515":null}}


id: PBO:0003410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Cki2","termid":"PBO:0003410"}


id: MOD:00682
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-arginine residue to a hydroxylated L-arginine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated residue","termid":"MOD:00677"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxylated arginine","synonyms":[{"name":"HyArg","type":"exact"}],"termid":"MOD:00682"}


id: SO:0002046
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A FRE is an enhancer element necessary and sufficient to confer filamentation associated expression in S. cerevisiae.","definition_xrefs":["PMID:1489142","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enhancer_binding_site","termid":"SO:0001461"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRE","synonyms":[{"name":"filamentation and invasion response element","type":"exact"}],"termid":"SO:0002046"}


id: GO:0018995
data:
  {"annotated_genes":["SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[115669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0085039"}]},"cv_name":"cellular_component","definition":"Any cellular component of a host cell. The host is an organism in which another organism, for instance a parasite or symbiont, spends part or all of its life cycle and from which it obtains nourishment and/or protection.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02392":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cellular component","references_by_uniquename":{"PMID:30726171":null},"secondary_identifiers":["Wikipedia:Host_(biology)"],"synonyms":[{"name":"host organism","type":"exact"}],"termid":"GO:0018995","terms_by_termid":{"GO:0085039":null}}


id: GO:1905892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to thapsigargin.","definition_xrefs":["PMID:21803450","GO_REF:0000058","GOC:TermGenie","GOC:aruk","GOC:bc"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular response to thapsigargin (obsolete GO:1905892)","synonyms":[{"name":"down regulation of cellular response to thapsigargin","type":"exact"},{"name":"down-regulation of cellular response to thapsigargin","type":"exact"},{"name":"downregulation of cellular response to thapsigargin","type":"exact"},{"name":"inhibition of cellular response to thapsigargin","type":"narrow"}],"termid":"GO:1905892"}


id: GO:0034630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a RITS complex is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"RITS complex localization","synonyms":[{"name":"RITS complex localisation","type":"exact"},{"name":"establishment and maintenance of RITS complex localization","type":"exact"}],"termid":"GO:0034630"}


id: FYPO:0005792
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a new growth zone forms along the lateral portion of the cell (often in the middle) before septation, such that a single cell grows in the form of the letter T, when the cell undergoes transition from G0 phase to G2. Cell length is normal.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-shaped cell during recovery from quiescence","termid":"FYPO:0005810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005568"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0005447","FYPO:0005568","FYPO:0000002"],"is_obsolete":false,"name":"T-shaped cell during G0 to G2 transition","synonyms":[{"name":"T-shaped cell during cell cycle re-entry at G2","type":"exact"},{"name":"T-shaped cell during cell quiescence to G2 transition","type":"exact"},{"name":"T-shaped cell during exit from cell quiescence into G2","type":"exact"},{"name":"T-shaped cell during quiescence to G2 transition","type":"exact"},{"name":"T-shaped cell during recovery from quiescence following G2 arrest","type":"exact"},{"name":"T-shaped cell during recovery from quiescence into G2","type":"exact"},{"name":"cell morphology, T shaped during G0 to G2 transition","type":"exact"}],"termid":"FYPO:0005792"}


id: PBO:0065119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C substrate 80K-H","termid":"PBO:0065119"}


id: PBO:0060315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain kinase family member 4","termid":"PBO:0060315"}


id: PBO:0001191
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed in response to mating pheromone","termid":"PBO:0001191"}


id: GO:0070396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lipoteichoic acid, which is a major component of the cell wall of gram-positive bacteria and typically consists of a chain of glycerol-phosphate repeating units linked to a glycolipid anchor.","definition_xrefs":["GOC:add","PMID:14665680"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid catabolic process","termid":"GO:0070393"},{"relation_name":"is_a","term_name":"lipoteichoic acid metabolic process","termid":"GO:0070394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipoteichoic acid catabolic process","synonyms":[{"name":"lipoteichoic acid breakdown","type":"exact"},{"name":"lipoteichoic acid catabolism","type":"exact"},{"name":"lipoteichoic acid degradation","type":"exact"}],"termid":"GO:0070396"}


id: PBO:0054749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2159","termid":"PBO:0054749"}


id: PBO:0040589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain and CNC homolog 1","termid":"PBO:0040589"}


id: PBO:0024478
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-Syndromic X-Linked Intellectual Disability","termid":"PBO:0024478"}


id: GO:0051614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that prevents the activation of the directed movement of serotonin into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibition of neurotransmitter uptake","termid":"GO:0051609"},{"relation_name":"is_a","term_name":"negative regulation of serotonin uptake","termid":"GO:0051612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"inhibition of serotonin uptake","synonyms":[{"name":"inhibition of 5-HT uptake","type":"exact"},{"name":"inhibition of 5-hydroxytryptamine uptake","type":"exact"},{"name":"inhibition of 5HT uptake","type":"exact"},{"name":"inhibition of serotonin import","type":"exact"}],"termid":"GO:0051614"}


id: GO:0060959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cardiac neuron over time, from its formation to the mature state.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron development","termid":"GO:0048666"},{"relation_name":"is_a","term_name":"cardiac cell development","termid":"GO:0055006"},{"relation_name":"part_of","term_name":"cardiac neuron differentiation","termid":"GO:0060945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac neuron development","synonyms":[{"name":"heart neuron development","type":"exact"}],"termid":"GO:0060959"}


id: GO:1901960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving isobutanol.","definition_xrefs":["GOC:mengo_curators","PMID:22224870","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"isobutanol metabolic process","synonyms":[{"name":"isobutanol metabolism","type":"exact"}],"termid":"GO:1901960"}


id: PBO:0059660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 26","termid":"PBO:0059660"}


id: PBO:0066990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 293","termid":"PBO:0066990"}


id: GO:0019208
data:
  {"annotated_genes":["SJAG_03309","SJAG_00229","SJAG_00369","SJAG_04968","SJAG_01270","SJAG_00526","SJAG_04999","SJAG_02380","SJAG_00534","SJAG_04627","SJAG_01901","SJAG_00078","SJAG_00095","SJAG_03353","SJAG_00883","SJAG_03793","SJAG_04638","SJAG_03681","SJAG_03940","SJAG_01142","SJAG_03272","SJAG_04871"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84795,114641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008597"},{"annotations":[114642,103290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019211"},{"annotations":[93761,102626,111975,111046,113122,114019,88978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072542"},{"annotations":[86341,85446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004864"},{"annotations":[93762,97334,108810,89030,88979,95649,92392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019888"},{"annotations":[95494,107439,83924],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004865"},{"annotations":[86030,93923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008160"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of a phosphatase, an enzyme which catalyzes of the removal of a phosphate group from a substrate molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00095":null,"SJAG_00229":null,"SJAG_00369":null,"SJAG_00526":null,"SJAG_00534":null,"SJAG_00883":null,"SJAG_01142":null,"SJAG_01270":null,"SJAG_01901":null,"SJAG_02380":null,"SJAG_03272":null,"SJAG_03309":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_03793":null,"SJAG_03940":null,"SJAG_04627":null,"SJAG_04638":null,"SJAG_04871":null,"SJAG_04968":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"phosphatase regulator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0019208","terms_by_termid":{"GO:0004864":null,"GO:0004865":null,"GO:0008160":null,"GO:0008597":null,"GO:0019211":null,"GO:0019888":null,"GO:0072542":null}}


