# terms

id: GO:0070673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-18 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-18","synonyms":[{"name":"response to IL-18","type":"exact"}],"termid":"GO:0070673"}


id: PBO:0027571
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_pore_distribution_during_mitotic_interphase","termid":"PBO:0027571"}


id: PBO:0072804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"senescence associated long non-coding RNA 3","termid":"PBO:0072804"}


id: PBO:0067275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 353, pseudogene","termid":"PBO:0067275"}


id: PBO:0066370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol dehydrogenase 13","termid":"PBO:0066370"}


id: SO:0000405
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Y RNAs are components of the Ro ribonucleoprotein particle (Ro RNP), in association with Ro60 and La proteins. The Y RNAs and Ro60 and La proteins are well conserved, but the function of the Ro RNP is not known. In humans the RNA component can be one of four small RNAs: hY1, hY3, hY4 and hY5. These small RNAs are predicted to fold into a conserved secondary structure containing three stem structures. The largest of the four, hY1, contains an additional hairpin.","direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y_RNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Y_RNA"],"synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:Y_RNA","type":"exact"},{"name":"Y RNA","type":"exact"}],"termid":"SO:0000405"}


id: FYPO:0004784
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a histone methyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methyltransferase activity","termid":"FYPO:0004783"},{"relation_name":"is_a","term_name":"decreased protein methyltransferase activity","termid":"FYPO:0005725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000641","FYPO:0000654","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"decreased histone methyltransferase activity","synonyms":[{"name":"reduced histone methyltransferase activity","type":"exact"}],"termid":"FYPO:0004784"}


id: FYPO:0000108
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to menadione. Cells stop growing (and may die) at a concentration of menadione that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to menadione","synonyms":[{"name":"hypersensitive to menadione","type":"exact"},{"name":"sensitive to menadione during mitotic cell cycle","type":"related"},{"name":"sensitive to menadione during vegetative growth","type":"exact"},{"name":"sensitive to vitamin K3","type":"related"}],"termid":"FYPO:0000108"}


id: PBO:0070663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 34","termid":"PBO:0070663"}


id: GO:0035598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the methylthiolation (-SCH3 addition) at the C2 of the adenosine ring of N6-threonylcarbomyladenosine (t6A) in tRNA, to form 2-methylthio-N6-threonylcarbamoyladenosine (ms2t6A).","definition_xrefs":["PMID:20472640","PMID:20584901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylthiotransferase activity","termid":"GO:0035596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"N6-threonylcarbomyladenosine methylthiotransferase activity","secondary_identifiers":["Reactome:R-HSA-6786571"],"synonyms":[{"name":"t6A methylthiotransferase activity","type":"exact"}],"termid":"GO:0035598"}


id: PR:Q9USU9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription initiation factor IIA subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02933"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor IIA large subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28F2.09","secondary_identifiers":["UniProtKB:Q9USU9"],"synonyms":[{"name":"Spom972h-GTF2A1","type":"exact"},{"name":"TFIIA large subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USU9"}


id: GO:0099528
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a neurotransmitter and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:bf","GOC:fj","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"neurotransmitter receptor activity","termid":"GO:0030594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled neurotransmitter receptor activity","synonyms":[{"name":"G-protein coupled neurotransmitter receptor activity","type":"exact"}],"termid":"GO:0099528"}


id: FYPO:0005195
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein degradation is normal (i.e. indistinguishable from wild type) during S phase of the mitotic cell cycle. Protein degradation, also known as protein catabolism, is any metabolic process that results in the destruction of the native, active configuration of a protein, with or without the hydrolysis of peptide bonds.","definition_xrefs":["PomBase:mah","GO:0030163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein degradation","termid":"FYPO:0002799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein degradation during mitotic S phase","synonyms":[{"name":"normal protein breakdown during mitotic S phase","type":"exact"},{"name":"normal protein catabolic process during mitotic S phase","type":"exact"},{"name":"normal protein catabolism during mitotic S phase","type":"exact"},{"name":"normal protein degradation during S phase during mitotic cell cycle","type":"related"},{"name":"normal protein degradation during mitotic S phase during vegetative growth","type":"exact"}],"termid":"FYPO:0005195"}


id: FYPO:0002527
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a protein is localized to the cell division site for longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell division site","termid":"FYPO:0001401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"increased duration of protein localization to cell division site","synonyms":[{"name":"increased duration of protein localisation to cell division site","type":"exact"},{"name":"increased duration of protein localization to cell division site during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to cell division site during vegetative growth","type":"exact"},{"name":"increased duration of protein recruitment to cell division site","type":"related"},{"name":"prolonged protein localization to cell division site","type":"exact"}],"termid":"FYPO:0002527"}


id: FYPO:0003737
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, begins later than normal during G2 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of protein phosphorylation during vegetative growth","termid":"FYPO:0002830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of protein phosphorylation during mitotic G2 phase","synonyms":[{"name":"delayed onset of protein phosphorylation during mitotic G2 phase during vegetative growth","type":"exact"},{"name":"delayed onset of protein phosphorylation during mitotic G2-phase","type":"exact"},{"name":"delayed onset of protein/peptide phosphorylation during mitotic G2 phase","type":"exact"},{"name":"delayed protein phosphorylation during mitotic G2 phase","type":"exact"}],"termid":"FYPO:0003737"}


id: PBO:0066006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ral GEF with PH domain and SH3 binding motif 1","termid":"PBO:0066006"}


id: GO:0023048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a lipid signal causes activation of a receptor.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal initiation by lipid mediator (obsolete GO:0023048)","synonyms":[{"name":"signal initiation by lipid mediator","type":"exact"}],"termid":"GO:0023048"}


id: PATO:0001679
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A volume quality inhering in a mass of substance by virtue of the amount of 3-dimensional space it occupies.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Specific_volume"],"direct_ancestors":[{"relation_name":"is_a","term_name":"volume","termid":"PATO:0000918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"specific volume","termid":"PATO:0001679"}


id: PBO:0084059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein (GAP) for Rho3p, involved in cell polarity green fluorescent protein (GFP)-fusion protein localizes to the cell periphery and cytoplasm; relocalizes from bud neck to cytoplasm upon DNA replication stress","termid":"PBO:0084059"}


id: GO:0061125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP by the action of a chlorinated alkylphenone. An alkylphenone is an aromatic polyketide with methyl and chlorine substitutions.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061119"},{"relation_name":"is_a","term_name":"negative regulation of positive chemotaxis to cAMP","termid":"GO:0061123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061125"}


id: GO:0140782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of novofumigatonin, a heavily oxygenated meroterpenoid containing a unique orthoester moiety.","definition_xrefs":["PMID:29968715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"novofumigatonin biosynthetic process","synonyms":[{"name":"novofumigatonin anabolism","type":"exact"},{"name":"novofumigatonin biosynthesis","type":"exact"},{"name":"novofumigatonin formation","type":"exact"},{"name":"novofumigatonin synthesis","type":"exact"}],"termid":"GO:0140782"}


id: GO:1901772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lincomycin.","definition_xrefs":["GOC:yaf","GOC:TermGenie","PMID:8577249"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"S-glycoside metabolic process","termid":"GO:0016143"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"lincomycin metabolic process","synonyms":[{"name":"lincomycin metabolism","type":"exact"}],"termid":"GO:1901772"}


id: GO:0035105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer of a sterol regulatory element binding protein (SREBP) into the nucleus, across the nuclear membrane, in response to altered levels of one or more lipids. SREBPs are transcription factors that bind sterol regulatory elements (SREs), DNA motifs found in the promoters of target genes.","definition_xrefs":["GOC:bf","GOC:vw","PMID:12923525"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol regulatory element binding protein import into nucleus (obsolete GO:0035105)","synonyms":[{"name":"SREBP import into nucleus","type":"exact"},{"name":"SREBP import into nucleus involved in sterol depletion response","type":"exact"},{"name":"SREBP nuclear translocation","type":"narrow"},{"name":"sterol depletion response, SREBP import into nucleus","type":"exact"},{"name":"sterol depletion response, SREBP nuclear translocation","type":"narrow"},{"name":"sterol depletion response, sterol regulatory element binding protein import into nucleus","type":"exact"},{"name":"sterol depletion response, sterol regulatory element binding protein nuclear translocation","type":"narrow"},{"name":"sterol regulatory element binding protein import into nucleus involved in sterol depletion response","type":"narrow"},{"name":"sterol regulatory element binding protein nuclear translocation","type":"narrow"},{"name":"sterol regulatory element binding protein nuclear translocation involved in sterol depletion response","type":"narrow"}],"termid":"GO:0035105"}


id: PBO:0054867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2281","termid":"PBO:0054867"}


id: GO:1902307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sodium ion transmembrane transport.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:rl","PMID:18591664","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sodium ion transport","termid":"GO:0010765"},{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transport","termid":"GO:1902305"},{"relation_name":"is_a","term_name":"positive regulation of cation transmembrane transport","termid":"GO:1904064"},{"relation_name":"positively_regulates","term_name":"sodium ion transmembrane transport","termid":"GO:0035725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of sodium ion transmembrane transport","synonyms":[{"name":"activation of sodium ion membrane transport","type":"narrow"},{"name":"activation of sodium ion transmembrane transport","type":"narrow"},{"name":"positive regulation of sodium ion membrane transport","type":"exact"},{"name":"up regulation of sodium ion membrane transport","type":"exact"},{"name":"up regulation of sodium ion transmembrane transport","type":"exact"},{"name":"up-regulation of sodium ion membrane transport","type":"exact"},{"name":"up-regulation of sodium ion transmembrane transport","type":"exact"},{"name":"upregulation of sodium ion membrane transport","type":"exact"},{"name":"upregulation of sodium ion transmembrane transport","type":"exact"}],"termid":"GO:1902307"}


id: GO:0102585
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anthocyanin A3 + malonyl-CoA = anthocyanin A5 + CoA.","definition_xrefs":["PMID:17292360","RHEA:72871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"cyanidin 3-O-[2''-O-(xylosyl)-6''-O-(p-coumaroyl) glucoside] 5-O-glucoside malonyltransferase activity","secondary_identifiers":["MetaCyc:RXN-15331"],"termid":"GO:0102585"}


id: GO:0160059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell death resulting from activation of endogenous cellular processes and occurring as a result of a retinoic acid.","definition_xrefs":["PMID:9187263","PMID:17869331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"},{"relation_name":"part_of","term_name":"cellular response to retinoic acid","termid":"GO:0071300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"programmed cell death in response to retinoic acid","synonyms":[{"name":"retinoic acid-induced apoptosis","type":"exact"}],"termid":"GO:0160059"}


id: PBO:0070619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 3","termid":"PBO:0070619"}


id: GO:0004276
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of mature proteins from their proproteins by cleavage of the terminal bond of Arg-Xaa-Yaa-Arg-Z motifs where Xaa can be any amino acid and Yaa is Arg or Lys. Releases albumin, complement component C3 and von Willebrand factor from their respective precursors.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete furin activity (obsolete GO:0004276)","synonyms":[{"name":"PACE","type":"related"},{"name":"SPC3","type":"related"},{"name":"dibasic processing enzyme activity","type":"related"},{"name":"furin activity","type":"exact"},{"name":"paired basic amino acid cleaving enzyme","type":"related"},{"name":"paired basic amino acid converting enzyme","type":"related"},{"name":"paired basic amino acid residue cleaving enzyme activity","type":"related"},{"name":"prohormone convertase activity","type":"narrow"},{"name":"serine proteinase PACE","type":"related"}],"termid":"GO:0004276"}


id: GO:0015231
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of 5-formyltetrahydrofolate, the formylated derivative of tetrahydrofolate, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"5-formyltetrahydrofolate transmembrane transporter activity","synonyms":[{"name":"5-formyltetrahydrofolate transporter activity","type":"exact"}],"termid":"GO:0015231"}


id: PBO:0088889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ/DUF1977, human DNAJB12 homolog, Hsp70 co-chaperone","termid":"PBO:0088889"}


id: PBO:0002892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cds1/Rad53/Chk2 family protein kinase Mek1","termid":"PBO:0002892"}


id: PBO:0087939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translational repressor of the mitochondrial ATP6/8 mRNA; homozygous diploid deletion strain has a sporulation defect characterized by elevated dityrosine in the soluble fraction; expression induced by calcium shortage","termid":"PBO:0087939"}


id: FYPO:0007302
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell is too low to detect when the cell is subject to heat shock. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah","PMID:32075773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein absent from cell during vegetative growth","termid":"FYPO:0001984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"protein absent from cell during heat shock","synonyms":[{"name":"protein absent from cell during heat shock during mitotic cell cycle","type":"related"},{"name":"protein absent from cell during heat shock during vegetative growth","type":"exact"},{"name":"undetectable cellular protein level during heat shock","type":"exact"}],"termid":"FYPO:0007302"}


id: MOD:00843
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes atoms of particular common isotopes with atoms of or groups containing (15)N.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope labeled residue","termid":"MOD:00702"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(15)N labeled residue","termid":"MOD:00843"}


id: GO:1903234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of calcium ion-dependent exocytosis of neurotransmitter.","definition_xrefs":["GO_REF:0000058","PMID:16782817","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium ion-dependent exocytosis","termid":"GO:0045955"},{"relation_name":"is_a","term_name":"regulation of calcium ion-dependent exocytosis of neurotransmitter","termid":"GO:1903233"},{"relation_name":"is_a","term_name":"negative regulation of synaptic vesicle exocytosis","termid":"GO:2000301"},{"relation_name":"negatively_regulates","term_name":"calcium ion-regulated exocytosis of neurotransmitter","termid":"GO:0048791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192","GO:0023052"],"is_obsolete":false,"name":"negative regulation of calcium ion-dependent exocytosis of neurotransmitter","synonyms":[{"name":"down regulation of calcium ion-dependent exocytosis of neurotransmitter","type":"exact"},{"name":"down-regulation of calcium ion-dependent exocytosis of neurotransmitter","type":"exact"},{"name":"downregulation of calcium ion-dependent exocytosis of neurotransmitter","type":"exact"},{"name":"inhibition of calcium ion-dependent exocytosis of neurotransmitter","type":"narrow"}],"termid":"GO:1903234"}


id: PBO:0040095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosyltransferase 2B, pseudogene","termid":"PBO:0040095"}


id: MOD:00295
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-octanoyl-L-serine.","definition_xrefs":["PubMed:10604470","RESID:AA0290","PubMed:12716131","Unimod:426#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-octanoylated residue","termid":"MOD:00669"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"O-octanoyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(octanoyloxy)propanoic acid","type":"exact"},{"name":"L-serine octanoate ester","type":"exact"},{"name":"LIPID O-octanoyl serine","type":"exact"},{"name":"O-octanoyl-L-serine","type":"exact"},{"name":"O-octanoylated L-serine","type":"exact"},{"name":"O3-octanoyl-L-serine","type":"exact"},{"name":"OOctSer","type":"exact"},{"name":"Octanoyl","type":"related"},{"name":"octanoyl","type":"related"}],"termid":"MOD:00295"}


id: PBO:0038362
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_necessary_component_activity","termid":"PBO:0038362"}


id: FYPO:0002808
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 6,7-dimethyl-8-ribityllumazine synthase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal 6,7-dimethyl-8-ribityllumazine synthase activity","termid":"FYPO:0002808"}


id: MOD:01586
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-threonine residue and a glycine residue by an ester bond to form O-glycyl-L-threonine.","definition_xrefs":["RESID:AA0496","PubMed:17502423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ester crosslinked residues","termid":"MOD:00885"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycyl-L-threonine","synonyms":[{"name":"(2S,3R)-2-amino-3-[(aminoacetyl)oxy]butanoic acid","type":"exact"},{"name":"CROSSLNK Glycyl threonine ester (Gly-Thr) (interchain with T-...)","type":"exact"},{"name":"CROSSLNK Glycyl threonine ester (Thr-Gly) (interchain with G-...)","type":"exact"},{"name":"O-(glycyl)-L-threonine","type":"exact"},{"name":"O3-(2-aminoacetyl)threonine","type":"exact"},{"name":"threonine glycinate ester","type":"exact"}],"termid":"MOD:01586"}


id: GO:0034129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of MyD88-independent toll-like receptor signaling pathway.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of toll-like receptor signaling pathway","termid":"GO:0034123"},{"relation_name":"is_a","term_name":"regulation of MyD88-independent toll-like receptor signaling pathway","termid":"GO:0034127"},{"relation_name":"positively_regulates","term_name":"MyD88-independent toll-like receptor signaling pathway","termid":"GO:0002756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of MyD88-independent toll-like receptor signaling pathway","synonyms":[{"name":"positive regulation of MyD88-independent TLR signaling pathway","type":"exact"},{"name":"positive regulation of MyD88-independent toll-like receptor","type":"exact"},{"name":"positive regulation of MyD88-independent toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0034129"}


id: PBO:0070201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 126 pseudogene","termid":"PBO:0070201"}


id: PR:O43005
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- apl1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 complex subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.06c","synonyms":[{"name":"Spom972h-apl1","type":"exact"},{"name":"beta-2-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"beta-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin assembly protein complex 2 beta large chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin assembly protein large beta chain (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43005"}


id: GO:0048281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of inflorescences are generated and organized. An inflorescence is the part of a seed plant body that is usually above ground and that can bear flowers.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"shoot system morphogenesis","termid":"GO:0010016"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"part_of","term_name":"inflorescence development","termid":"GO:0010229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inflorescence morphogenesis","termid":"GO:0048281"}


id: GO:0048756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a sieve cell. A sieve cell is a type of sieve element that has relatively undifferentiated sieve areas (with narrow pores). The sieve areas are rather uniform in structure on all walls; that is, there are no sieve plates. Typical of gymnosperms and lower vascular plants. The sieve element is the cell in the phloem tissue concerned with mainly longitudinal conduction of food materials.","definition_xrefs":["PO:0025415","POC:curators","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sieve element differentiation","termid":"GO:0090603"},{"relation_name":"part_of","term_name":"phloem development","termid":"GO:0010088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sieve cell differentiation","termid":"GO:0048756"}


id: GO:0140625
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the opioid growth factor (OGF, met-enkephalin) and transmitting the signal across the nuclear membrane. Met-enkephalin is an endogenous opioid peptide that binds to opioid and opioid growth factor receptors, regulating tissue growth in a variety of cellular processes.","definition_xrefs":["PMID:11890982"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide receptor activity","termid":"GO:0001653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"opioid growth factor receptor activity","synonyms":[{"name":"met-enkephalin receptor activity","type":"related"},{"name":"metenkefalin receptor activity","type":"related"},{"name":"methionine enkephalin receptor activity","type":"exact"}],"termid":"GO:0140625"}


id: PBO:0003787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein Nop52 family (predicted)","termid":"PBO:0003787"}


id: PBO:0060504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 4 pseudogene 3","termid":"PBO:0060504"}


id: FYPO:0002092
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids is abnormal during meiosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic chromosome organization","termid":"FYPO:0006759"},{"relation_name":"is_a","term_name":"abnormal cellular process during meiotic cell cycle","termid":"FYPO:0007260"},{"relation_name":"part_of","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"abnormal meiotic sister chromatid cohesion","synonyms":[{"name":"abnormal sister chromatid cohesion during meiosis","type":"exact"}],"termid":"FYPO:0002092"}


id: PBO:0001897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit Srb8","termid":"PBO:0001897"}


id: PBO:0002355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein Adg2","termid":"PBO:0002355"}


id: PBO:0059783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 9","termid":"PBO:0059783"}


id: PBO:0081887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 837","termid":"PBO:0081887"}


id: FYECO:0000322
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which bortezomib was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ bortezomib","termid":"FYECO:0000322"}


id: PBO:0042097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 169","termid":"PBO:0042097"}


id: GO:0015771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of trehalose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Trehalose is a disaccharide that consists of two molecules of glucose and is isomeric with sucrose.","definition_xrefs":["PMID:17606922","PMID:20035867","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transport","termid":"GO:0015766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"trehalose transport","termid":"GO:0015771"}


id: PBO:0048778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine monophosphate synthase","termid":"PBO:0048778"}


id: PBO:0055142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2561","termid":"PBO:0055142"}


id: PBO:0062820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organic solute carrier partner 1","termid":"PBO:0062820"}


id: FYPO:0003655
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the splicing tRNA substrates does not occur.","definition_xrefs":["GO:0006388","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"abolished tRNA splicing","synonyms":[{"name":"abolished tRNA splicing during mitotic cell cycle","type":"related"},{"name":"abolished tRNA splicing during vegetative growth","type":"exact"},{"name":"abolished tRNA splicing, via endonucleolytic cleavage and ligation","type":"exact"},{"name":"tRNA splicing abolished","type":"exact"}],"termid":"FYPO:0003655"}


id: GO:0032129
data:
  {"annotated_genes":["SJAG_00581","SJAG_01075","SJAG_04186"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100260,105520],"is_not":false,"summary":null,"term":"GO:0032129"},{"annotations":[100263,110490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046969"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H3 N6-acetyl-L-lysine (position 9) + H2O = histone H3 L-lysine (position 9) + acetate. This reaction represents the removal of an acetyl group from lysine at position 9 of the histone H3 protein.","definition_xrefs":["PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K deacetylase activity","termid":"GO:0141050"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00581":null,"SJAG_01075":null,"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0033558","GO:0003674","GO:0019213","GO:0016787","GO:0140096","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"histone H3K9 deacetylase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"histone H3-K9 deacetylase activity","type":"exact"},{"name":"histone deacetylase activity (H3-K9 specific)","type":"exact"}],"termid":"GO:0032129","terms_by_termid":{"GO:0032129":null,"GO:0046969":null}}


id: PBO:0042047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 103","termid":"PBO:0042047"}


id: PBO:0083919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Forms the dehydrodolichyl diphosphate synthase (DDS) complex with NUS1; involved in synthesis of long-chain dolichols (19-22 isoprene units; as opposed to Rer2p which synthesizes shorter-chain dolichols); localizes to lipid bodies; transcription is induced during stationary phase","termid":"PBO:0083919"}


id: PBO:0053293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIMK2 pseudogene 1","termid":"PBO:0053293"}


id: PBO:0003117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inosine-uridine preferring nucleoside hydrolase (predicted)","termid":"PBO:0003117"}


id: PBO:0005415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase Meu8 (predicted)","termid":"PBO:0005415"}


id: PBO:0030540
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_cAMP_level_during_cellular_response_to_glucose_stimulus","termid":"PBO:0030540"}


id: GO:1901981
data:
  {"annotated_genes":["SJAG_02572","SJAG_01135","SJAG_01748","SJAG_00216","SJAG_01783","SJAG_00638","SJAG_00971","SJAG_04963","SJAG_01519","SJAG_02587","SJAG_02248","SJAG_00368","SJAG_00314","SJAG_00118","SJAG_00115","SJAG_02657","SJAG_00173","SJAG_01769","SJAG_04024","SJAG_03851","SJAG_01143","SJAG_00663","SJAG_03250","SJAG_00117","SJAG_02468","SJAG_01516","SJAG_04010","SJAG_02852","SJAG_04077","SJAG_04644","SJAG_02166","SJAG_01945","SJAG_02392","SJAG_04960","SJAG_04219","SJAG_05179","SJAG_00152","SJAG_01382"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91920],"is_not":false,"summary":null,"term":"GO:1901981"},{"annotations":[84129,98489,113542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005547"},{"annotations":[94670,96349,95387,93670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080025"},{"annotations":[91994,93671,99497,95898,100882,95763,105845,106044,108520,94671,96350,111296,86636,95899,87554,105694,104711,97772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032266"},{"annotations":[86808,102072,84061,97818,97828,97980,113117,102641,95350,110952,115044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005546"},{"annotations":[94778,98490,90567,95351,96182,108560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070273"}]},"cv_name":"molecular_function","definition":"Binding to phosphatidylinositol phosphate.","definition_xrefs":["GOC:TermGenie","PMID:23445487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol binding","termid":"GO:0035091"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_00117":null,"SJAG_00118":null,"SJAG_00152":null,"SJAG_00173":null,"SJAG_00216":null,"SJAG_00314":null,"SJAG_00368":null,"SJAG_00638":null,"SJAG_00663":null,"SJAG_00971":null,"SJAG_01135":null,"SJAG_01143":null,"SJAG_01382":null,"SJAG_01516":null,"SJAG_01519":null,"SJAG_01748":null,"SJAG_01769":null,"SJAG_01783":null,"SJAG_01945":null,"SJAG_02166":null,"SJAG_02248":null,"SJAG_02392":null,"SJAG_02468":null,"SJAG_02572":null,"SJAG_02587":null,"SJAG_02657":null,"SJAG_02852":null,"SJAG_03250":null,"SJAG_03851":null,"SJAG_04010":null,"SJAG_04024":null,"SJAG_04077":null,"SJAG_04219":null,"SJAG_04644":null,"SJAG_04960":null,"SJAG_04963":null,"SJAG_05179":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"phosphatidylinositol phosphate binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1901981","terms_by_termid":{"GO:0005546":null,"GO:0005547":null,"GO:0032266":null,"GO:0070273":null,"GO:0080025":null,"GO:1901981":null}}


id: FYPO:0006145
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during a cellular response to copper ions is lower than normal during the meiotic cell cycle. Total RNA or a specific RNA may be affected.","definition_xrefs":["PMID:24569997","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiotic cell cycle","termid":"FYPO:0004630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during cellular response to copper ion during meiotic cell cycle","synonyms":[{"name":"decreased RNA accumulation during cellular response to copper ion during meiotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to copper during meiotic cell cycle","type":"exact"},{"name":"decreased RNA level during meiotic cell cycle during copper excess","type":"related"},{"name":"decreased transcript level during cellular response to copper ion during meiotic cell cycle","type":"exact"},{"name":"reduced RNA level during cellular response to copper ion during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006145"}


id: PBO:0051786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing F4, pseudogene","termid":"PBO:0051786"}


id: PR:O74516
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- trm44 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (uracil-O(2)-)-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.10","synonyms":[{"name":"Spom972h-trm44","type":"exact"}],"termid":"PR:O74516"}


id: GO:0010438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of sulfur.","definition_xrefs":["PMID:17420480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sulfur starvation","termid":"GO:0010438"}


id: SO:0000638
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Part of an rRNA transcription unit that is transcribed but discarded during maturation, not giving rise to any part of rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA_primary_transcript_region","termid":"SO:0000838"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcribed_spacer_region","synonyms":[{"name":"transcribed spacer region","type":"exact"}],"termid":"SO:0000638"}


id: PBO:0071709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 7","termid":"PBO:0071709"}


id: MOD:01516
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modifications that have monoisotopic mass differences from their respective origins of 144.099-144.106 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.01 Da","termid":"MOD:01514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modifications with monoisotopic mass diferences that are nominally equal at 144.099-144.106 Da.","termid":"MOD:01516"}


id: PBO:0034719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1-CUL4-associated factor (DCAF), Wdr70","termid":"PBO:0034719"}


id: PR:Q09778
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A hamartin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR15154:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberous sclerosis 1 protein homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F3.13","secondary_identifiers":["UniProtKB:Q09778"],"synonyms":[{"name":"SPAC22F3.13","type":"related"},{"name":"Spom972h-TSC1","type":"exact"}],"termid":"PR:Q09778"}


id: GO:0061480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an asparaginase stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to asparaginase","termid":"GO:0061480"}


id: FYPO:0001392
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which regulation of vegetative cell growth is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal regulation of cell growth","synonyms":[{"name":"abnormal regulation of vegetative cell growth","type":"exact"}],"termid":"FYPO:0001392"}


id: PBO:0002978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(hydroxymethyl)glutathione synthase activity (predicted)","termid":"PBO:0002978"}


id: PATO:0001963
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curled quality inhering in a bearer by virtue of the bearer's edges of its surface being rolled backwards spirally on each side.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curled","termid":"PATO:0000405"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"revolute","termid":"PATO:0001963"}


id: FYPO:0005947
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing potassium chloride.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002058","FYPO:0002057","FYPO:0000003","FYPO:0002060","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on potassium chloride","synonyms":[{"name":"normal cell population growth in presence of potassium chloride","type":"exact"},{"name":"normal cell population growth on KCl","type":"exact"},{"name":"normal cell population growth on potassium chloride","type":"exact"},{"name":"normal cellular response to potassium chloride","type":"related"},{"name":"normal vegetative cell population growth on potassium chloride","type":"exact"}],"termid":"FYPO:0005947"}


id: GO:1901529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anion channel activity.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anion channel activity","termid":"GO:0010359"},{"relation_name":"is_a","term_name":"positive regulation of ion transmembrane transporter activity","termid":"GO:0032414"},{"relation_name":"is_a","term_name":"positive regulation of anion transmembrane transport","termid":"GO:1903961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of anion channel activity","synonyms":[{"name":"activation of anion channel activity","type":"narrow"},{"name":"up regulation of anion channel activity","type":"exact"},{"name":"up-regulation of anion channel activity","type":"exact"},{"name":"upregulation of anion channel activity","type":"exact"}],"termid":"GO:1901529"}


id: PBO:0013841
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary microcephaly","termid":"PBO:0013841"}


id: PBO:0034493
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-split_kinetochore_during_meiosis_I","termid":"PBO:0034493"}


id: PBO:0042947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 1","termid":"PBO:0042947"}


id: GO:0007476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the imaginal disc-derived wing are generated and organized. The wing is an appendage modified for flying.","definition_xrefs":["GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc-derived appendage morphogenesis","termid":"GO:0035114"},{"relation_name":"is_a","term_name":"post-embryonic appendage morphogenesis","termid":"GO:0035120"},{"relation_name":"part_of","term_name":"wing disc morphogenesis","termid":"GO:0007472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived wing morphogenesis","synonyms":[{"name":"wing morphogenesis","type":"exact"}],"termid":"GO:0007476"}


id: SO:0000536
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"9 nucleotide recombination site (e.g. ACAAAAACC), part of V-gene recombination feature of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"nonamer_of_recombination_feature_of_vertebrate_immune_system_gene","termid":"SO:0000562"},{"relation_name":"part_of","term_name":"V_gene_recombination_feature","termid":"SO:0000538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_nonamer","synonyms":[{"name":"V nonamer","type":"exact"},{"name":"V-NONAMER","type":"exact"}],"termid":"SO:0000536"}


id: PBO:0084844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; has similarity to E. coli L7/L12 and human MRPL7 ribosomal proteins; associates with the mitochondrial nucleoid; required for normal respiratory growth","termid":"PBO:0084844"}


id: PBO:0072141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 18","termid":"PBO:0072141"}


id: PR:Q10061
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsh1 gene.","definition_xrefs":["UniProtKB:Q10061","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein 70 homolog lhs1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.06","synonyms":[{"name":"Spom972h-lsh1","type":"exact"}],"termid":"PR:Q10061"}


id: PBO:0049402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUCA1ANB-GUCA1A readthrough","termid":"PBO:0049402"}


id: GO:0050259
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + NADP+ + ribofuranose = D-ribonate + 2 H+ + NADPH.","definition_xrefs":["EC:1.1.1.115","RHEA:11676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"ribose 1-dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:RIBOSE-1-DEHYDROGENASE-NADP+-RXN","KEGG_REACTION:R01079"],"synonyms":[{"name":"D-ribose dehydrogenase (NADP+)","type":"related"},{"name":"D-ribose:NADP+ 1-oxidoreductase activity","type":"related"},{"name":"NADP-pentose-dehydrogenase activity","type":"related"}],"termid":"GO:0050259"}


id: GO:0051898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of phosphatidylinositol 3-kinase/protein kinase B signal transduction.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction","termid":"GO:0051896"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"phosphatidylinositol 3-kinase/protein kinase B signal transduction","termid":"GO:0043491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction","synonyms":[{"name":"down regulation of protein kinase B signaling cascade","type":"related"},{"name":"down-regulation of protein kinase B signaling cascade","type":"related"},{"name":"downregulation of protein kinase B signaling cascade","type":"related"},{"name":"inhibition of protein kinase B signaling cascade","type":"narrow"},{"name":"negative regulation of AKT signaling cascade","type":"related"},{"name":"negative regulation of AKT signalling cascade","type":"related"},{"name":"negative regulation of PI3K-PKB/Akt pathway","type":"exact"},{"name":"negative regulation of PI3K/Akt signal transduction","type":"exact"},{"name":"negative regulation of PI3K/PKB signal transduction","type":"exact"},{"name":"negative regulation of PKB signaling cascade","type":"related"},{"name":"negative regulation of PKB signalling cascade","type":"related"},{"name":"negative regulation of phosphatidylinositol 3-kinase signaling/protein kinase B signal transduction","type":"exact"},{"name":"negative regulation of protein kinase B signaling","type":"related"},{"name":"negative regulation of protein kinase B signaling cascade","type":"related"},{"name":"negative regulation of protein kinase B signalling cascade","type":"related"}],"termid":"GO:0051898"}


id: GO:0008938
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + nicotinate = N-methylnicotinate + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:20241","EC:2.1.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"nicotinate N-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01721","MetaCyc:NICOTINATE-N-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:nicotinate N-methyltransferase activity","type":"related"},{"name":"furanocoumarin 8-O-methyltransferase activity","type":"related"}],"termid":"GO:0008938"}


id: GO:0039558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces IRF7-dependent gene transcription, by promoting the sumoylation of IRF7, thereby disabling its activity.","definition_xrefs":["PMID:19694547","PMID:18635538","VZ:653"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host IRF7 activity by positive regulation of IRF7 sumoylation (obsolete GO:0039558)","synonyms":[{"name":"promotion of IRF-7 SUMOylation","type":"exact"},{"name":"suppression by virus of host interferon regulatory factor-7 activity by positive regulation of IRF7 sumoylation","type":"related"}],"termid":"GO:0039558"}


id: PBO:0069470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 737, pseudogene","termid":"PBO:0069470"}


id: GO:0050692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein's DNA binding domain (DBD).","definition_xrefs":["PMID:9682036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"DNA binding domain binding","synonyms":[{"name":"DBD binding","type":"exact"}],"termid":"GO:0050692"}


id: PBO:0001731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionyl-tRNA formyltransferase Fmt1 (predicted)","termid":"PBO:0001731"}


id: PBO:0075835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"somatostatin receptor 3","termid":"PBO:0075835"}


id: PBO:0076403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 1 like","termid":"PBO:0076403"}


id: GO:0042614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CD70, a receptor found on the surface of most activated B cells and some activated T cells.","definition_xrefs":["ISBN:0120781859","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"CD70 receptor binding","synonyms":[{"name":"CD27 receptor activity","type":"related"},{"name":"CD27L binding","type":"exact"}],"termid":"GO:0042614"}


id: PBO:0070533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 32","termid":"PBO:0070533"}


id: PBO:0049684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXD antisense growth-associated long non-coding RNA","termid":"PBO:0049684"}


id: GO:0070314
data:
  {"annotated_genes":["SJAG_00690","SJAG_00169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88861,105721],"is_not":false,"summary":null,"term":"GO:0070314"}]},"cv_name":"biological_process","definition":"A cell cycle arrest process that results in arrest during G1 phase, whereupon the cell enters a specialized resting state known as G0 or quiescence.","definition_xrefs":["ISBN:0815316194","GOC:mah","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00690":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"G1 to G0 transition","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G1/G0 transition","type":"exact"},{"name":"cell cycle quiescence","type":"related"},{"name":"establishment of cell quiescence","type":"exact"},{"name":"stationary phase","type":"related"}],"termid":"GO:0070314","terms_by_termid":{"GO:0070314":null}}


id: PBO:0084692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial dicarboxylate carrier; integral membrane protein, catalyzes a dicarboxylate-phosphate exchange across the inner mitochondrial membrane, transports cytoplasmic dicarboxylates into the mitochondrial matrix","termid":"PBO:0084692"}


id: PBO:0083578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; putative HLH protein; partially overlaps the verified ORF MAL11/YGR289C (a high-affinity maltose transporter)","termid":"PBO:0083578"}


id: PBO:0005643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MVB sorting pathway protein (predicted)","termid":"PBO:0005643"}


id: PBO:0030923
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_viability_in_stationary_phase","termid":"PBO:0030923"}


id: FYPO:0003081
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which genetic imprinting at the mating-type locus occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal genetic imprinting at mating-type locus","termid":"FYPO:0003079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased genetic imprinting at mating-type locus","synonyms":[{"name":"decreased genetic imprinting at mating-type locus during mitotic cell cycle","type":"related"},{"name":"decreased genetic imprinting at mating-type locus during vegetative growth","type":"exact"},{"name":"reduced genetic imprinting at mating-type locus","type":"exact"}],"termid":"FYPO:0003081"}


id: GO:0005811
data:
  {"annotated_genes":["SJAG_03604","SJAG_02907","SJAG_03609","SJAG_02543","SJAG_02980","SJAG_02487","SJAG_03471","SJAG_03909","SJAG_02163","SJAG_03235","SJAG_03360","SJAG_04532","SJAG_02089","SJAG_04041","SJAG_02161","SJAG_01036","SJAG_00624","SJAG_04973"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[65804,84798,86095,86172,87939,90089,90704,93739,93827,93838,94530,98268,100746,101642,109483,110250,110858,113653],"is_not":false,"summary":null,"term":"GO:0005811"}]},"cv_name":"cellular_component","definition":"An intracellular non-membrane-bounded organelle comprising a matrix of coalesced lipids surrounded by a phospholipid monolayer. May include associated proteins.","definition_xrefs":["GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular non-membrane-bounded organelle","termid":"GO:0043232"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00624":null,"SJAG_01036":null,"SJAG_02089":null,"SJAG_02161":null,"SJAG_02163":null,"SJAG_02487":null,"SJAG_02543":null,"SJAG_02907":null,"SJAG_02980":null,"SJAG_03235":null,"SJAG_03360":null,"SJAG_03471":null,"SJAG_03604":null,"SJAG_03609":null,"SJAG_03909":null,"SJAG_04041":null,"SJAG_04532":null,"SJAG_04973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"lipid droplet","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"adiposome","type":"exact"},{"name":"lipid body","type":"exact"},{"name":"lipid particle","type":"exact"}],"termid":"GO:0005811","terms_by_termid":{"GO:0005811":null}}


id: PBO:0075676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spexin hormone","termid":"PBO:0075676"}


id: GO:0019511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The hydroxylation of peptidyl-proline to form peptidyl-hydroxyproline.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein hydroxylation","termid":"GO:0018126"},{"relation_name":"is_a","term_name":"peptidyl-proline modification","termid":"GO:0018208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-proline hydroxylation","secondary_identifiers":["GO:0006472"],"termid":"GO:0019511"}


id: GO:0071888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a macrophage, a mononuclear phagocyte present in a variety of tissues.","definition_xrefs":["GOC:mtg_apoptosis","GOC:BHF","CL:0000235","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory cell apoptotic process","termid":"GO:0006925"},{"relation_name":"is_a","term_name":"myeloid cell apoptotic process","termid":"GO:0033028"},{"relation_name":"is_a","term_name":"leukocyte apoptotic process","termid":"GO:0071887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage apoptotic process","synonyms":[{"name":"AICD","type":"related"},{"name":"activation-induced cell death","type":"related"},{"name":"macrophage apoptosis","type":"narrow"}],"termid":"GO:0071888"}


id: SO:0000464
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-functional descendant of an exon.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_region","termid":"SO:0000462"},{"relation_name":"non_functional_homolog_of","term_name":"exon","termid":"SO:0000147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decayed_exon","synonyms":[{"name":"decayed exon","type":"exact"}],"termid":"SO:0000464"}


id: GO:0036068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of chlorophyll, any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment, from less complex precursors, which occur in the absence of light.","definition_xrefs":["GOC:yaf","PMID:12242396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorophyll biosynthetic process","termid":"GO:0015995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"light-independent chlorophyll biosynthetic process","synonyms":[{"name":"light independent chlorophyll biosynthetic process","type":"exact"},{"name":"light-independent chlorophyll anabolism","type":"exact"},{"name":"light-independent chlorophyll biosynthesis","type":"exact"},{"name":"light-independent chlorophyll formation","type":"exact"},{"name":"light-independent chlorophyll synthesis","type":"exact"}],"termid":"GO:0036068"}


id: GO:0160090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a guanosine in mRNA + S-adenosyl-L-methionine = an N(7)-methylguanosine in mRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:31031084","PMID:37379838","RHEA:60508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA methyltransferase activity","termid":"GO:0008174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0140098","GO:0016741"],"is_obsolete":false,"name":"internal mRNA (guanine-N7-)-methyltransferase activity","termid":"GO:0160090"}


id: PBO:0083686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enolase, a phosphopyruvate hydratase; catalyzes the conversion of 2-phosphoglycerate to phosphoenolpyruvate; complements the growth defect of an ENO1 ENO2 double mutant in glucose","termid":"PBO:0083686"}


id: CHEBI:29699
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tunicamycin","termid":"CHEBI:29699"}


id: PBO:0028574
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_arginine_import","termid":"PBO:0028574"}


id: PBO:0080205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VEZT pseudogene 1","termid":"PBO:0080205"}


id: PBO:0070418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II associated protein 3","termid":"PBO:0070418"}


id: PBO:0108764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, nutrient sensing, zf-GATA-type Gaf1","termid":"PBO:0108764"}


id: PBO:0063992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 26","termid":"PBO:0063992"}


id: GO:0005938
data:
  {"annotated_genes":["SJAG_04375","SJAG_00800","SJAG_02753","SJAG_03609","SJAG_00521","SJAG_01964","SJAG_03936","SJAG_04624","SJAG_00104","SJAG_01925","SJAG_01006","SJAG_00663","SJAG_02245","SJAG_00920","SJAG_00661","SJAG_03455","SJAG_02431","SJAG_04052","SJAG_00773","SJAG_02040","SJAG_02320","SJAG_00790","SJAG_03564","SJAG_04509","SJAG_04044","SJAG_03915","SJAG_03465","SJAG_04498","SJAG_04465","SJAG_03655","SJAG_02228","SJAG_02838","SJAG_01774","SJAG_04887","SJAG_04134","SJAG_04886","SJAG_00028","SJAG_01978","SJAG_03374","SJAG_01889","SJAG_01748","SJAG_01297","SJAG_03688","SJAG_00805","SJAG_02087","SJAG_02831","SJAG_02561","SJAG_02695","SJAG_05285","SJAG_03073","SJAG_00228","SJAG_02202","SJAG_00185","SJAG_01993","SJAG_02989","SJAG_01360","SJAG_00652","SJAG_04765","SJAG_03943","SJAG_04470","SJAG_04597","SJAG_03338","SJAG_02566","SJAG_04776","SJAG_00332","SJAG_03581","SJAG_02266","SJAG_04620","SJAG_02379","SJAG_01268","SJAG_00397","SJAG_03748","SJAG_04554","SJAG_00030","SJAG_02602","SJAG_01453","SJAG_01613","SJAG_02626","SJAG_04960","SJAG_00845","SJAG_00825","SJAG_00551","SJAG_02864","SJAG_01277","SJAG_01848","SJAG_02222","SJAG_03486","SJAG_04644","SJAG_01118","SJAG_00175","SJAG_03631","SJAG_01196","SJAG_03637","SJAG_04621","SJAG_04280","SJAG_00880","SJAG_00118","SJAG_00082","SJAG_00268","SJAG_01329","SJAG_01460","SJAG_02737","SJAG_03170","SJAG_03025","SJAG_01456","SJAG_01665","SJAG_00216","SJAG_02282","SJAG_03703","SJAG_04901","SJAG_02657","SJAG_01943","SJAG_02019","SJAG_00368","SJAG_00807","SJAG_02233","SJAG_01794","SJAG_04001","SJAG_02805","SJAG_01114","SJAG_04417","SJAG_01384","SJAG_03380","SJAG_01855","SJAG_03795","SJAG_05290","SJAG_01370","SJAG_04462","SJAG_00750","SJAG_01732","SJAG_05274","SJAG_00970","SJAG_03146","SJAG_01738","SJAG_04059","SJAG_00938","SJAG_04322","SJAG_04100","SJAG_03162","SJAG_01787","SJAG_00907","SJAG_03602","SJAG_03379","SJAG_00851","SJAG_00261","SJAG_03718","SJAG_04050","SJAG_02278","SJAG_00140","SJAG_00229","SJAG_04479","SJAG_03357","SJAG_00514","SJAG_04460","SJAG_04049","SJAG_01168","SJAG_01894","SJAG_02368","SJAG_04724","SJAG_00416","SJAG_00700","SJAG_03247","SJAG_04982","SJAG_00236","SJAG_04486","SJAG_02169","SJAG_00053","SJAG_03938","SJAG_04690","SJAG_02336","SJAG_03864","SJAG_04566","SJAG_02045","SJAG_02177","SJAG_00355","SJAG_03887","SJAG_04771","SJAG_04703","SJAG_02645","SJAG_04077","SJAG_01224","SJAG_04461","SJAG_04781","SJAG_03596","SJAG_03453","SJAG_01017","SJAG_04413","SJAG_04648","SJAG_03375","SJAG_02166","SJAG_03681","SJAG_02683","SJAG_00152","SJAG_04666","SJAG_03750","SJAG_04947","SJAG_03625","SJAG_01769","SJAG_03705","SJAG_00596","SJAG_02286","SJAG_00113","SJAG_00279","SJAG_03145","SJAG_03011","SJAG_04517","SJAG_00072","SJAG_02241","SJAG_02075","SJAG_00649","SJAG_04507","SJAG_03119","SJAG_01448","SJAG_03704","SJAG_01167","SJAG_03126","SJAG_03086","SJAG_03044","SJAG_02392","SJAG_01658","SJAG_01143","SJAG_02700","SJAG_02511","SJAG_04522","SJAG_03088","SJAG_02216","SJAG_00677"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61595,62457,65102,83820,83917,83929,83943,84120,84199,84650,85288,85790,87193,89610,90848,91419,93032,93629,96982,98177,98662,98784,99550,100581,101341,102025,102600,102627,103273,104791,107654,107713,108223,110893,114847,115037],"is_not":false,"summary":null,"term":"GO:0005938"},{"annotations":[85429],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030478"},{"annotations":[97773,114918,84212,85885,104049,101182,106743,95736,110944,104790,84318,98799,89702,98571,95371,88579,86926,99368,101394,102064,96975,103082,105106,107076,102934,103208,99124,107727,108966,94886,95916,89874,93976,101200,110382,86725,97803,112242,107925,94947,90945,108248,114556,99306,93778,97006,90847,102895,108222,91338,88620],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030479"},{"annotations":[115318,115316,115595,98480,115317,115315,115246,115319],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005826"},{"annotations":[99549,112071,94488,95052],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110115"},{"annotations":[85916,96227,103083,86796,83601,102137,104385,95796,106154,112554,99307,83584,84214,94888,99551,86819,108359,91899,95372,110099,98696,96983,113969,84528,84121,106809,107714,99757,85394,91420,92923,87945,103061,100691,106915,107418,110215,87424,99026,89611,92329,114693,89913,87115,107926,99808,93779,112243,109141,95032,83944,86889,90626,93033,95950,102896,91469,98718,109111,92365,91260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051285"},{"annotations":[112244,90627,114890,113970,110216,86797,102138,88455,108005,93261,114694,112555,86768,109112,111875,83945,85917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902716"},{"annotations":[108006,113971,96984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140472"},{"annotations":[91421,113938],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030863"},{"annotations":[103235,107420,83949,91472,87330,103183,85921,86891,110219,112247,89524],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090726"},{"annotations":[110246,87530,110466,100429,104693,114650,115589,108118,90298,86462,84828,105675,107722,91381,115009,102368,115590,99515,84538,103444,112291,114741,97531,114939,91743,89720],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032541"},{"annotations":[89135],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099021"},{"annotations":[94673,95265,97475,104295,87425,99945],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0055028"},{"annotations":[107459,93630,87036,83821],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030981"},{"annotations":[91261,93631,99810],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903754"},{"annotations":[114219,87946],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036286"},{"annotations":[95376,90633,99311],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061645"},{"annotations":[115270,115277,115596,89411,115272,115279],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990753"},{"annotations":[110220,84687,113797,95605,109933,86802,111712,114895,97975],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000145"},{"annotations":[87039],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032117"},{"annotations":[105468,110221,112248,91903,100694,83953,103661],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097575"},{"annotations":[96148,100584],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990463"},{"annotations":[90557,112036,102051,96168],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032175"},{"annotations":[99126,93781,112250,101389,84533,99313,109116,113941,88365,106812,88460,106573,113961,114936,90634,104183,91426,84215,103663,94489,107928,98722,95956,97823,114699,93704,93978,93954,113106,95377,83607,106854,88582,101186,94952,102936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031097"},{"annotations":[97824,99982,93878,97015,104006,114700,113942,96169,108834,93955],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036391"},{"annotations":[84338,85016,112072,92380,94490,89916,101220,113107,96755,86774,113943,97318,94088,102245,88366,95055,88626],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071341"},{"annotations":[112037,90558,102052,96170],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032152"},{"annotations":[113710,89878,86776,102246,111883,90635,99761,106855,114897,86047,113108,113944,109421,114701,93705,115271,115273,85877,102937,94089,108362,93265,91345,98484,88628,96988,85389,86823,90992,92381,103090,97326,104185,88583,106814,83955,111967,90462,101398,113962,115276,96756,115278,115280,88367,94350,97319,84339,115644],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110085"},{"annotations":[101187,96589,96757,113945,105112],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120106"},{"annotations":[99762,90993,102247,105113,86824,92382,113946,91904,93266,96989,84340,86048,108363,109422,106856,113963,90463],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120105"},{"annotations":[98485,93706,113109,99984,88368,113015,113947,103091,94090,88629,93957,97017,104186,96172,105114],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120104"},{"annotations":[96173,97018,93958,99985],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032151"},{"annotations":[112039,102055,96175,90561],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032169"},{"annotations":[97019],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005940"}]},"cv_name":"cellular_component","definition":"The region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasm","termid":"GO:0005737"},{"relation_name":"part_of","term_name":"cell periphery","termid":"GO:0071944"}],"gene_count":227,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00030":null,"SJAG_00053":null,"SJAG_00072":null,"SJAG_00082":null,"SJAG_00104":null,"SJAG_00113":null,"SJAG_00118":null,"SJAG_00140":null,"SJAG_00152":null,"SJAG_00175":null,"SJAG_00185":null,"SJAG_00216":null,"SJAG_00228":null,"SJAG_00229":null,"SJAG_00236":null,"SJAG_00261":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00332":null,"SJAG_00355":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00416":null,"SJAG_00514":null,"SJAG_00521":null,"SJAG_00551":null,"SJAG_00596":null,"SJAG_00649":null,"SJAG_00652":null,"SJAG_00661":null,"SJAG_00663":null,"SJAG_00677":null,"SJAG_00700":null,"SJAG_00750":null,"SJAG_00773":null,"SJAG_00790":null,"SJAG_00800":null,"SJAG_00805":null,"SJAG_00807":null,"SJAG_00825":null,"SJAG_00845":null,"SJAG_00851":null,"SJAG_00880":null,"SJAG_00907":null,"SJAG_00920":null,"SJAG_00938":null,"SJAG_00970":null,"SJAG_01006":null,"SJAG_01017":null,"SJAG_01114":null,"SJAG_01118":null,"SJAG_01143":null,"SJAG_01167":null,"SJAG_01168":null,"SJAG_01196":null,"SJAG_01224":null,"SJAG_01268":null,"SJAG_01277":null,"SJAG_01297":null,"SJAG_01329":null,"SJAG_01360":null,"SJAG_01370":null,"SJAG_01384":null,"SJAG_01448":null,"SJAG_01453":null,"SJAG_01456":null,"SJAG_01460":null,"SJAG_01613":null,"SJAG_01658":null,"SJAG_01665":null,"SJAG_01732":null,"SJAG_01738":null,"SJAG_01748":null,"SJAG_01769":null,"SJAG_01774":null,"SJAG_01787":null,"SJAG_01794":null,"SJAG_01848":null,"SJAG_01855":null,"SJAG_01889":null,"SJAG_01894":null,"SJAG_01925":null,"SJAG_01943":null,"SJAG_01964":null,"SJAG_01978":null,"SJAG_01993":null,"SJAG_02019":null,"SJAG_02040":null,"SJAG_02045":null,"SJAG_02075":null,"SJAG_02087":null,"SJAG_02166":null,"SJAG_02169":null,"SJAG_02177":null,"SJAG_02202":null,"SJAG_02216":null,"SJAG_02222":null,"SJAG_02228":null,"SJAG_02233":null,"SJAG_02241":null,"SJAG_02245":null,"SJAG_02266":null,"SJAG_02278":null,"SJAG_02282":null,"SJAG_02286":null,"SJAG_02320":null,"SJAG_02336":null,"SJAG_02368":null,"SJAG_02379":null,"SJAG_02392":null,"SJAG_02431":null,"SJAG_02511":null,"SJAG_02561":null,"SJAG_02566":null,"SJAG_02602":null,"SJAG_02626":null,"SJAG_02645":null,"SJAG_02657":null,"SJAG_02683":null,"SJAG_02695":null,"SJAG_02700":null,"SJAG_02737":null,"SJAG_02753":null,"SJAG_02805":null,"SJAG_02831":null,"SJAG_02838":null,"SJAG_02864":null,"SJAG_02989":null,"SJAG_03011":null,"SJAG_03025":null,"SJAG_03044":null,"SJAG_03073":null,"SJAG_03086":null,"SJAG_03088":null,"SJAG_03119":null,"SJAG_03126":null,"SJAG_03145":null,"SJAG_03146":null,"SJAG_03162":null,"SJAG_03170":null,"SJAG_03247":null,"SJAG_03338":null,"SJAG_03357":null,"SJAG_03374":null,"SJAG_03375":null,"SJAG_03379":null,"SJAG_03380":null,"SJAG_03453":null,"SJAG_03455":null,"SJAG_03465":null,"SJAG_03486":null,"SJAG_03564":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_03602":null,"SJAG_03609":null,"SJAG_03625":null,"SJAG_03631":null,"SJAG_03637":null,"SJAG_03655":null,"SJAG_03681":null,"SJAG_03688":null,"SJAG_03703":null,"SJAG_03704":null,"SJAG_03705":null,"SJAG_03718":null,"SJAG_03748":null,"SJAG_03750":null,"SJAG_03795":null,"SJAG_03864":null,"SJAG_03887":null,"SJAG_03915":null,"SJAG_03936":null,"SJAG_03938":null,"SJAG_03943":null,"SJAG_04001":null,"SJAG_04044":null,"SJAG_04049":null,"SJAG_04050":null,"SJAG_04052":null,"SJAG_04059":null,"SJAG_04077":null,"SJAG_04100":null,"SJAG_04134":null,"SJAG_04280":null,"SJAG_04322":null,"SJAG_04375":null,"SJAG_04413":null,"SJAG_04417":null,"SJAG_04460":null,"SJAG_04461":null,"SJAG_04462":null,"SJAG_04465":null,"SJAG_04470":null,"SJAG_04479":null,"SJAG_04486":null,"SJAG_04498":null,"SJAG_04507":null,"SJAG_04509":null,"SJAG_04517":null,"SJAG_04522":null,"SJAG_04554":null,"SJAG_04566":null,"SJAG_04597":null,"SJAG_04620":null,"SJAG_04621":null,"SJAG_04624":null,"SJAG_04644":null,"SJAG_04648":null,"SJAG_04666":null,"SJAG_04690":null,"SJAG_04703":null,"SJAG_04724":null,"SJAG_04765":null,"SJAG_04771":null,"SJAG_04776":null,"SJAG_04781":null,"SJAG_04886":null,"SJAG_04887":null,"SJAG_04901":null,"SJAG_04947":null,"SJAG_04960":null,"SJAG_04982":null,"SJAG_05274":null,"SJAG_05285":null,"SJAG_05290":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cell cortex","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null,"PMID:25866389":null,"PMID:27059155":null,"PMID:27734801":null,"PMID:28655757":null,"PMID:33495454":null,"PMID:36148799":null},"secondary_identifiers":["Wikipedia:Cell_cortex"],"synonyms":[{"name":"cell periphery","type":"related"},{"name":"ectoplasm","type":"narrow"},{"name":"peripheral cytoplasm","type":"related"}],"termid":"GO:0005938","terms_by_termid":{"GO:0000085":null,"GO:0000145":null,"GO:0005826":null,"GO:0005938":null,"GO:0005940":null,"GO:0030478":null,"GO:0030479":null,"GO:0030863":null,"GO:0030981":null,"GO:0031097":null,"GO:0032117":null,"GO:0032151":null,"GO:0032152":null,"GO:0032169":null,"GO:0032175":null,"GO:0032541":null,"GO:0036286":null,"GO:0036391":null,"GO:0051285":null,"GO:0051325":null,"GO:0051329":null,"GO:0055028":null,"GO:0061645":null,"GO:0071341":null,"GO:0090726":null,"GO:0097575":null,"GO:0099021":null,"GO:0110085":null,"GO:0110115":null,"GO:0120104":null,"GO:0120105":null,"GO:0120106":null,"GO:0140472":null,"GO:1902716":null,"GO:1903754":null,"GO:1990463":null,"GO:1990753":null}}


id: GO:0140020
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses DNA methyltransferase activity.","definition_xrefs":["PMID:24947342","PMID:20939822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA methyltransferase complex","termid":"GO:0140020"}


id: FYPO:0003468
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which RNA splicing is normal (i.e. indistinguishable from wild type). All RNA splicing may be normal, or one splicing of or more specific RNA molecules may be specifically assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolism phenotype","termid":"FYPO:0000294"},{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype during vegetative growth","termid":"FYPO:0001347"},{"relation_name":"is_a","term_name":"normal RNA processing","termid":"FYPO:0001980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000294","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA splicing","synonyms":[{"name":"normal RNA splicing during mitotic cell cycle","type":"related"},{"name":"normal RNA splicing during vegetative growth","type":"exact"},{"name":"normal RNA splicing, via transesterification reactions with bulged adenosine as nucleophile","type":"exact"}],"termid":"FYPO:0003468"}


id: PBO:0026632
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K4_methylation","termid":"PBO:0026632"}


id: PBO:0001747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and cytoplasmic glycine-tRNA ligase Grs1 (predicted)","termid":"PBO:0001747"}


id: PBO:0049104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPR160 pseudogene 1","termid":"PBO:0049104"}


id: GO:0009084
data:
  {"annotated_genes":["SJAG_00635","SJAG_00412","SJAG_04145","SJAG_04054","SJAG_01461","SJAG_00495","SJAG_00636","SJAG_00120","SJAG_00392","SJAG_04577","SJAG_00660","SJAG_00695","SJAG_01019","SJAG_01592","SJAG_00359","SJAG_03266","SJAG_03457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106520,102561,107135,107968,114450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006526"},{"annotations":[106521,94229,114451,107136,98683,99511,94221,107969,102562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042450"},{"annotations":[90332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006542"},{"annotations":[113807,97589,107294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097054"},{"annotations":[97839,96223,86938,102822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055129"},{"annotations":[86939,96224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006561"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of amino acids of the glutamine family, comprising arginine, glutamate, glutamine and proline.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamine family amino acid metabolic process","termid":"GO:0009064"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"proteinogenic amino acid biosynthetic process","termid":"GO:0170038"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00120":null,"SJAG_00359":null,"SJAG_00392":null,"SJAG_00412":null,"SJAG_00495":null,"SJAG_00635":null,"SJAG_00636":null,"SJAG_00660":null,"SJAG_00695":null,"SJAG_01019":null,"SJAG_01461":null,"SJAG_01592":null,"SJAG_03266":null,"SJAG_03457":null,"SJAG_04054":null,"SJAG_04145":null,"SJAG_04577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"glutamine family amino acid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glutamine family amino acid anabolism","type":"exact"},{"name":"glutamine family amino acid biosynthesis","type":"exact"},{"name":"glutamine family amino acid formation","type":"exact"},{"name":"glutamine family amino acid synthesis","type":"exact"}],"termid":"GO:0009084","terms_by_termid":{"GO:0006526":null,"GO:0006542":null,"GO:0006561":null,"GO:0042450":null,"GO:0055129":null,"GO:0097054":null}}


id: PBO:0088475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery anamorsin Dre2","termid":"PBO:0088475"}


id: PBO:0042152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 14","termid":"PBO:0042152"}


id: PBO:0031347
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_enfumafungin","termid":"PBO:0031347"}


id: GO:0015716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of phosphonates into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A phosphonate is any salt, anion, or ester of phosphonic acid (HPO(OH)2).","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"organic phosphonate transport","secondary_identifiers":["GO:0042916"],"synonyms":[{"name":"alkylphosphonate transport","type":"narrow"}],"termid":"GO:0015716"}


id: PBO:0027028
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_telomere_during_meiotic_cell_cycle","termid":"PBO:0027028"}


id: FYPO:0000801
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03596:allele-1":{"allele_type":"amino_acid_mutation","description":"L264P,P442T","gene_uniquename":"SJAG_03596","name":"cdc15-A","uniquename":"SJAG_03596:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[115263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[115297],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[115251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000231"},{"annotations":[115301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000198"},{"annotations":[115312,115686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[115665],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003315"},{"annotations":[115284],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[115597,115252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[115298],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cytoskeleton organization is abnormal.","definition_xrefs":["PomBase:mah","GO:0030036","PMID:19713940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoskeleton organization during vegetative growth","termid":"FYPO:0001328"},{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization","termid":"FYPO:0004803"},{"relation_name":"is_a","term_name":"abnormal actin filament-based process","termid":"FYPO:0006306"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_03596":null,"SJAG_04280":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":10,"genotypes_by_uniquename":{"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc15-A(L264P,P442T aa)","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]}]},"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta":{"display_name":"cdc15-A(L264P,P442T aa) mid1delta","display_uniquename":"cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type__mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03596:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"wee1-as8(T582G aa)","display_uniquename":"wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0004803","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03596","SJAG_04522","SJAG_02392","SJAG_04280","SJAG_01143"],"name":"abnormal actin cytoskeleton organization during vegetative growth","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_04280","SJAG_01143","SJAG_04522","SJAG_02592","SJAG_04703","SJAG_03596","SJAG_02392"],"single_locus_genotype_uniquenames":["wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","rga4delta","pom1delta","sty1delta","for3delta","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","mid1delta"],"synonyms":[{"name":"abnormal actin cytoskeleton organisation during vegetative growth","type":"exact"},{"name":"abnormal actin cytoskeleton organization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000801","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000198":null,"FYPO:0000231":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO:0003315":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0081736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF667 antisense RNA 1 (head to head)","termid":"PBO:0081736"}


id: GO:0019671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The anaerobic chemical reactions and pathways resulting in the breakdown of glutamate via the intermediates mesaconate and S-citramalate, yielding energy in the form of ATP.","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate catabolic process via mesaconate and citramalate (obsolete GO:0019671)","synonyms":[{"name":"glutamate fermentation via mesaconate and citramalate","type":"exact"}],"termid":"GO:0019671"}


id: PATO:0002539
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a shape like a ring (a circular shape enclosing a space).","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring shaped","termid":"PATO:0002539"}


id: PBO:0078808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 25-1","termid":"PBO:0078808"}


id: PATO:0002391
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having three rays or radiating branches.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triradiate","termid":"PATO:0002391"}


id: PBO:0078160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 38-1","termid":"PBO:0078160"}


id: PBO:0075474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 25","termid":"PBO:0075474"}


id: PBO:0048270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GALNT7 divergent transcript","termid":"PBO:0048270"}


id: PBO:0110832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-GATA-type, amino acid sensing, Fil1","termid":"PBO:0110832"}


id: GO:1990440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of an endoplasmic reticulum stress.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:21113145"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress (obsolete GO:1990440)","synonyms":[{"name":"ER stress-induced upregulation of transcription","type":"broad"},{"name":"activation of transcription from RNA polymerase II promoter in response to ER stress","type":"exact"},{"name":"stimulation of transcription from RNA polymerase II promoter in response to ER stress","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress","type":"exact"},{"name":"up-regulation of transcription induced by ER stress","type":"broad"},{"name":"upregulation of Pol II transcription induced by ER stress","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1990440"}


id: PBO:0052278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 5D pseudogene 1","termid":"PBO:0052278"}


id: GO:0102511
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pelargonidin 3-O-beta-D-glucoside + 1-O-vanilloyl-beta-D-glucose = pelargonidin 3,7-di-O-beta-D-glucoside + vanillate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete pelargonidin 3-O-glucoside 7-O-glucosyltransferase (acyl-glucose dependent) activity (obsolete GO:0102511)","termid":"GO:0102511"}


id: GO:0005037
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete death receptor adaptor protein activity (obsolete GO:0005037)","synonyms":[{"name":"death receptor adaptor protein activity","type":"exact"}],"termid":"GO:0005037"}


id: PBO:0052437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLC2 antisense RNA 2","termid":"PBO:0052437"}


id: GO:0046857
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a nitrogenous group, excluding NH and NH2 groups, acts as a hydrogen or electron donor and reduces NAD or NADP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors","termid":"GO:0016661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","secondary_identifiers":["EC:1.7.1.-"],"termid":"GO:0046857"}


id: PBO:0002003
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.2.-","termid":"PBO:0002003"}


id: PBO:0052964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L1 cell adhesion molecule","termid":"PBO:0052964"}


id: PBO:0065917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RABGEF1 pseudogene 3","termid":"PBO:0065917"}


id: FYPO:0005470
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate synthase activity using NADH as a cofactor is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal oxidoreductase activity","termid":"FYPO:0000689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abnormal glutamate synthase (NADH) activity","synonyms":[{"name":"abnormal L-glutamate synthase (NADH) activity","type":"exact"},{"name":"abnormal NADH-dependent glutamate synthase activity","type":"exact"},{"name":"abnormal NADH: GOGAT activity","type":"related"},{"name":"abnormal glutamate (reduced nicotinamide adenine dinucleotide) synthase","type":"exact"}],"termid":"FYPO:0005470"}


id: PBO:0056884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS10 pseudogene 4","termid":"PBO:0056884"}


id: GO:1905800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intraciliary retrograde transport.","definition_xrefs":["PMID:27930654","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of intraciliary retrograde transport","termid":"GO:1905799"},{"relation_name":"negatively_regulates","term_name":"intraciliary retrograde transport","termid":"GO:0035721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of intraciliary retrograde transport","synonyms":[{"name":"down regulation of intraciliary retrograde transport","type":"exact"},{"name":"down regulation of intraflagellar retrograde transport","type":"exact"},{"name":"down-regulation of intraciliary retrograde transport","type":"exact"},{"name":"down-regulation of intraflagellar retrograde transport","type":"exact"},{"name":"downregulation of intraciliary retrograde transport","type":"exact"},{"name":"downregulation of intraflagellar retrograde transport","type":"exact"},{"name":"inhibition of intraciliary retrograde transport","type":"narrow"},{"name":"inhibition of intraflagellar retrograde transport","type":"narrow"},{"name":"negative regulation of intraflagellar retrograde transport","type":"exact"}],"termid":"GO:1905800"}


id: GO:0140980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of nucleosides within a cell.","definition_xrefs":["PMID:23416111","PMID:34880500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular nucleoside homeostasis","termid":"GO:0140980"}


id: PBO:0065770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"QKI, KH domain containing RNA binding","termid":"PBO:0065770"}


id: PBO:0025491
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cockayne syndrome","termid":"PBO:0025491"}


id: PBO:0046677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extended synaptotagmin 3","termid":"PBO:0046677"}


id: PBO:0005414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin Pex32 (predicted)","termid":"PBO:0005414"}


id: PBO:0084474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mating pheromone a-factor; made by a cells; interacts with alpha cells to induce cell cycle arrest and other responses leading to mating; biogenesis involves C-terminal modification, N-terminal proteolysis, and export; also encoded by MFA1","termid":"PBO:0084474"}


id: FYPO:0005259
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a population reaches stationary phase at, and maintains, a higher cell density than wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased cell density in stationary phase","termid":"FYPO:0005259"}


id: PBO:0040226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating transcription factor 2","termid":"PBO:0040226"}


id: PBO:0017087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA(Gln) amidotransferase complex subunit Gtf1 (predicted)","termid":"PBO:0017087"}


id: PBO:0000133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved protein","termid":"PBO:0000133"}


id: GO:0048025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of mRNA splicing via a spliceosomal mechanism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of RNA splicing","termid":"GO:0033119"},{"relation_name":"is_a","term_name":"regulation of mRNA splicing, via spliceosome","termid":"GO:0048024"},{"relation_name":"is_a","term_name":"negative regulation of mRNA processing","termid":"GO:0050686"},{"relation_name":"negatively_regulates","term_name":"mRNA splicing, via spliceosome","termid":"GO:0000398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"negative regulation of mRNA splicing, via spliceosome","secondary_identifiers":["GO:0035056"],"synonyms":[{"name":"down regulation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"down regulation of nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"down-regulation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"down-regulation of nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"downregulation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"downregulation of nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"inhibition of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"inhibition of nuclear mRNA splicing, via spliceosome","type":"narrow"},{"name":"negative regulation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"negative regulation of nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"negative regulation of pre-mRNA splicing","type":"broad"}],"termid":"GO:0048025"}


id: PBO:0049329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIF subunit 1","termid":"PBO:0049329"}


id: PBO:0055180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2604","termid":"PBO:0055180"}


id: GO:0052432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of programmed cell death in the symbiont, where programmed cell death proceeds by apoptosis. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of symbiont apoptosis (obsolete GO:0052432)","synonyms":[{"name":"modulation by organism of symbiont apoptosis","type":"exact"},{"name":"modulation by organism of symbiont apoptotic programmed cell death","type":"exact"}],"termid":"GO:0052432"}


id: GO:0048297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of isotype switching to IgA isotypes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of isotype switching","termid":"GO:0045829"},{"relation_name":"is_a","term_name":"regulation of isotype switching to IgA isotypes","termid":"GO:0048296"},{"relation_name":"negatively_regulates","term_name":"isotype switching to IgA isotypes","termid":"GO:0048290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of isotype switching to IgA isotypes","synonyms":[{"name":"down regulation of isotype switching to IgA isotypes","type":"exact"},{"name":"down-regulation of isotype switching to IgA isotypes","type":"exact"},{"name":"downregulation of isotype switching to IgA isotypes","type":"exact"},{"name":"inhibition of isotype switching to IgA isotypes","type":"narrow"},{"name":"negative regulation of class switch recombination to IgA isotypes","type":"exact"},{"name":"negative regulation of class switching to IgA isotypes","type":"exact"},{"name":"negative regulation of isotype switch recombination to IgA isotypes","type":"exact"}],"termid":"GO:0048297"}


id: PBO:0033808
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_recombination_at_telomere_during_vegetative_growth","termid":"PBO:0033808"}


id: GO:0062195
data:
  {"annotated_genes":["SJAG_04841"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93353],"is_not":false,"summary":null,"term":"GO:0062195"}]},"cv_name":"biological_process","definition":"The organization process that preserves a microtubule bundle in a stable functional or structural state.","definition_xrefs":["PMID:18061564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component maintenance","termid":"GO:0043954"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microtubule bundle maintenance","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062195","terms_by_termid":{"GO:0062195":null}}


id: PBO:0068410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein, transmembrane 1 pseudogene 1","termid":"PBO:0068410"}


id: PBO:0078642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA isopentenyltransferase 1","termid":"PBO:0078642"}


id: GO:1904254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an iron transmembrane transporter activity.","definition_xrefs":["GOC:kom","GO_REF:0000059","GOC:TermGenie","PMID:15514116","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of iron ion transmembrane transport","termid":"GO:0034759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of iron ion transmembrane transporter activity","synonyms":[{"name":"regulation of iron cation channel activity","type":"exact"},{"name":"regulation of iron channel activity","type":"exact"},{"name":"regulation of iron-specific channel activity","type":"exact"}],"termid":"GO:1904254"}


id: PBO:0064864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 21","termid":"PBO:0064864"}


id: GO:0043597
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The Y-shaped region of a cytoplasmic replicating DNA molecule, resulting from the separation of the DNA strands and in which the synthesis of new strands takes place. Also includes associated protein complexes.","definition_xrefs":["GOC:jl","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replication fork","termid":"GO:0005657"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic replication fork","termid":"GO:0043597"}


id: PBO:0064122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 2 like 2, transient receptor potential cation channel","termid":"PBO:0064122"}


id: PBO:0089327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear import signal receptor Kap95","termid":"PBO:0089327"}


id: PBO:0109142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic, EGF-CFC family member 1B","termid":"PBO:0109142"}


id: PBO:0087789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO-conjugating enzyme involved in the Smt3p conjugation pathway; nuclear protein required for S- and M-phase cyclin degradation and mitotic control; involved in proteolysis mediated by the anaphase-promoting complex cyclosome (APCC)","termid":"PBO:0087789"}


id: PBO:0030668
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_35S_rRNA_precursor_level","termid":"PBO:0030668"}


id: PR:Q9URT2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tho1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URT2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P25A2.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP25A2.03","synonyms":[{"name":"Spom972h-tho1","type":"exact"}],"termid":"PR:Q9URT2"}


id: FYPO:0002687
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which telomere length is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere morphology during vegetative growth","termid":"FYPO:0006513"},{"relation_name":"is_a","term_name":"normal telomere length","termid":"FYPO:0006515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal telomere length during vegetative growth","synonyms":[{"name":"normal telomere length during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002687"}


id: PBO:0074587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 3C","termid":"PBO:0074587"}


id: GO:0048526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of expanding or inflating the folded imaginal disc-derived pupal wing, and the adhering of the dorsal and ventral surfaces, to form the mature adult wing.","definition_xrefs":["GOC:mtg_sensu","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived wing expansion","synonyms":[{"name":"wing expansion","type":"exact"},{"name":"wing inflation","type":"exact"}],"termid":"GO:0048526"}


id: GO:0061548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a ganglion over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"},{"relation_name":"part_of","term_name":"nervous system development","termid":"GO:0007399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ganglion development","synonyms":[{"name":"ganglia development","type":"related"},{"name":"gangliogenesis","type":"narrow"}],"termid":"GO:0061548"}


id: FYPO:0002739
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell does not execute a meiotic cell cycle process normally. A meiotic cell cycle process is any of the processes that form part of the meiotic cell cycle, and thereby ensures successive accurate and complete genome replication and meiotic chromosome segregation.","definition_xrefs":["GO:0022402","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle","termid":"FYPO:0000052"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal meiotic cell cycle process","termid":"FYPO:0002739"}


id: PATO:0001527
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sound amplitude which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sound quality","termid":"PATO:0001519"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quiet","termid":"PATO:0001527"}


id: PBO:0113414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosome-associated protein; involved along with heterodimeric partner Tma22p in recycling of 40S ribosomal subunits; involved in nonsense-mediated mRNA decay (NMD); contains a putative RNA binding domain; null mutant exhibits translation defects; localizes to the cytosol; has homology to human oncogene MCT-1; protein abundance increases in response to DNA replication stress","termid":"PBO:0113414"}


id: PBO:0050787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 3A","termid":"PBO:0050787"}


id: PBO:0038929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor L3","termid":"PBO:0038929"}


id: PBO:0003342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1242 family protein, secretory pathway component Ksh1 (predicted)","termid":"PBO:0003342"}


id: PBO:0088728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Ykt6","termid":"PBO:0088728"}


id: PBO:0067515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 656, pseudogene","termid":"PBO:0067515"}


id: PBO:0067769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 69","termid":"PBO:0067769"}


id: PR:Q09840
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- aah2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.14c","synonyms":[{"name":"1,4-alpha-D-glucan glucanohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-aah2","type":"exact"}],"termid":"PR:Q09840"}


id: SO:0001524
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"When a genome contains an abnormal amount of chromosomes.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_genome","termid":"SO:0001506"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomally_aberrant_genome","synonyms":[{"name":"chromosomally aberrant genome","type":"related"}],"termid":"SO:0001524"}


id: PBO:0043571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type VIII alpha 1 chain","termid":"PBO:0043571"}


id: PBO:0035896
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation_at_centromere_during_vegetative_growth","termid":"PBO:0035896"}


id: GO:1904648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a rotenone stimulus.","definition_xrefs":["GO_REF:0000071","PMID:18538940","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to organic cyclic compound","termid":"GO:0071407"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"},{"relation_name":"is_a","term_name":"response to rotenone","termid":"GO:1904647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to rotenone","termid":"GO:1904648"}


id: PBO:0087743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SWI/SNF chromatin remodeling complex; involved in transcriptional regulation; interacts with a highly conserved 40-residue sequence of Snf2p; relocates to the cytosol under hypoxic conditions","termid":"PBO:0087743"}


id: PBO:0002970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, CCR4-NOT complex subunit Rcd1","termid":"PBO:0002970"}


id: PATO:0001500
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being gradually narrower or thinner toward one end.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sharp","termid":"PATO:0001419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tapered","synonyms":[{"name":"taper","type":"exact"}],"termid":"PATO:0001500"}


id: FYPO:0006941
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to actin cortical patches for a longer time than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to actin cortical patch","termid":"FYPO:0000742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased duration of protein localization to actin cortical patch","synonyms":[{"name":"increased duration of protein localisation to actin cortical patch","type":"exact"},{"name":"increased duration of protein localization to F-actin patch","type":"exact"},{"name":"increased duration of protein localization to actin cortical patch during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to actin cortical patch during vegetative growth","type":"exact"},{"name":"increased duration of protein localization to actin cortical patch involved in mitotic cytokinesis","type":"exact"},{"name":"increased duration of protein localization to actin patch","type":"exact"}],"termid":"FYPO:0006941"}


id: PBO:0048390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest specific 1","termid":"PBO:0048390"}


id: GO:1901972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of DNA-5-methylcytosine glycosylase activity.","definition_xrefs":["PMID:23316050","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of DNA-5-methylcytosine glycosylase activity (obsolete GO:1901972)","synonyms":[{"name":"activation of DNA-5-methylcytosine glycosylase activity","type":"narrow"},{"name":"up regulation of DNA-5-methylcytosine glycosylase activity","type":"exact"},{"name":"up-regulation of DNA-5-methylcytosine glycosylase activity","type":"exact"},{"name":"upregulation of DNA-5-methylcytosine glycosylase activity","type":"exact"}],"termid":"GO:1901972"}


id: GO:0072524
data:
  {"annotated_genes":["SJAG_00839","SJAG_00070","SJAG_02297","SJAG_00461","SJAG_05230","SJAG_03091","SJAG_01383","SJAG_00685","SJAG_03828","SJAG_04192","SJAG_03660","SJAG_01425","SJAG_00957","SJAG_01539","SJAG_02154","SJAG_01543","SJAG_00633","SJAG_01881","SJAG_03934","SJAG_00707","SJAG_04693","SJAG_03786","SJAG_02369","SJAG_02009","SJAG_04467","SJAG_01582","SJAG_03852","SJAG_03373","SJAG_02785","SJAG_03096","SJAG_02889","SJAG_02462","SJAG_01500","SJAG_02191","SJAG_04048","SJAG_01824","SJAG_01359","SJAG_01310","SJAG_01012","SJAG_00409","SJAG_03669","SJAG_00283","SJAG_04495","SJAG_02945","SJAG_02135","SJAG_02107","SJAG_02796","SJAG_02853","SJAG_00605","SJAG_06622","SJAG_03946","SJAG_00027","SJAG_03298","SJAG_02618","SJAG_00501","SJAG_05314","SJAG_02148","SJAG_00691","SJAG_04334","SJAG_04362","SJAG_04152","SJAG_03903","SJAG_00252","SJAG_01566","SJAG_04263","SJAG_02696","SJAG_06621"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[101504,94332,104978,104983,101503,101869,105441,91072,112428,105443,104982,99449,99707,101870,104984,100522,104980,94057,104981,105442,105444,105439,104979,101505,105445,105440,90583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[100524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006096"},{"annotations":[84674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[94250,107639],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061688"},{"annotations":[95401,87125,109157,86708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034356"},{"annotations":[96125,113376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[101158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019677"},{"annotations":[92519,87964,93534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019674"},{"annotations":[85082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[101159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006734"},{"annotations":[92783,108920,102547,90039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006116"},{"annotations":[92520,93535,87965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"},{"annotations":[101160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006742"},{"annotations":[96924,98157,95839,91166,91167,98158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006740"},{"annotations":[72107,74925],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[96673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006769"},{"annotations":[85371,99500,113689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046496"},{"annotations":[104556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"},{"annotations":[109158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046495"},{"annotations":[86709,85083,105670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019358"},{"annotations":[104557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071592"},{"annotations":[85003,92426,109880,104481],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0009052"},{"annotations":[114512,94251,111403,92959,93049,107640,90588],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0009051"},{"annotations":[85758],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905857"},{"annotations":[95749,111767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[96929,110459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[63544,83793,91556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[107890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"},{"annotations":[83794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042818"},{"annotations":[83795,91557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008615"},{"annotations":[88871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008614"},{"annotations":[85276],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[74924],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043456"},{"annotations":[96930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042820"},{"annotations":[95082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042816"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a pyridine-containing compound, i.e. any compound that contains pyridine or a formal derivative thereof.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":67,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00070":null,"SJAG_00252":null,"SJAG_00283":null,"SJAG_00409":null,"SJAG_00461":null,"SJAG_00501":null,"SJAG_00605":null,"SJAG_00633":null,"SJAG_00685":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_00839":null,"SJAG_00957":null,"SJAG_01012":null,"SJAG_01310":null,"SJAG_01359":null,"SJAG_01383":null,"SJAG_01425":null,"SJAG_01500":null,"SJAG_01539":null,"SJAG_01543":null,"SJAG_01566":null,"SJAG_01582":null,"SJAG_01824":null,"SJAG_01881":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02148":null,"SJAG_02154":null,"SJAG_02191":null,"SJAG_02297":null,"SJAG_02369":null,"SJAG_02462":null,"SJAG_02618":null,"SJAG_02696":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02853":null,"SJAG_02889":null,"SJAG_02945":null,"SJAG_03091":null,"SJAG_03096":null,"SJAG_03298":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03669":null,"SJAG_03786":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_03934":null,"SJAG_03946":null,"SJAG_04048":null,"SJAG_04152":null,"SJAG_04192":null,"SJAG_04263":null,"SJAG_04334":null,"SJAG_04362":null,"SJAG_04467":null,"SJAG_04495":null,"SJAG_04693":null,"SJAG_05230":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyridine-containing compound metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"pyridine and derivative metabolic process","type":"exact"},{"name":"pyridine-containing compound metabolism","type":"exact"}],"termid":"GO:0072524","terms_by_termid":{"GO:0006096":null,"GO:0006110":null,"GO:0006116":null,"GO:0006734":null,"GO:0006740":null,"GO:0006741":null,"GO:0006742":null,"GO:0006769":null,"GO:0008614":null,"GO:0008615":null,"GO:0009051":null,"GO:0009052":null,"GO:0009435":null,"GO:0009443":null,"GO:0010144":null,"GO:0019358":null,"GO:0019674":null,"GO:0019677":null,"GO:0034355":null,"GO:0034356":null,"GO:0036001":null,"GO:0042816":null,"GO:0042818":null,"GO:0042820":null,"GO:0042821":null,"GO:0042823":null,"GO:0043456":null,"GO:0045820":null,"GO:0046495":null,"GO:0046496":null,"GO:0061613":null,"GO:0061621":null,"GO:0061688":null,"GO:0071590":null,"GO:0071592":null,"GO:1905857":null}}


id: GO:0051895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of focal adhesion assembly, the establishment and maturation of focal adhesions.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-matrix adhesion","termid":"GO:0001953"},{"relation_name":"is_a","term_name":"regulation of focal adhesion assembly","termid":"GO:0051893"},{"relation_name":"is_a","term_name":"negative regulation of cell-substrate junction organization","termid":"GO:0150118"},{"relation_name":"is_a","term_name":"negative regulation of cell junction assembly","termid":"GO:1901889"},{"relation_name":"negatively_regulates","term_name":"focal adhesion assembly","termid":"GO:0048041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of focal adhesion assembly","synonyms":[{"name":"down regulation of focal adhesion formation","type":"exact"},{"name":"down-regulation of focal adhesion formation","type":"exact"},{"name":"downregulation of focal adhesion formation","type":"exact"},{"name":"inhibition of focal adhesion formation","type":"narrow"}],"termid":"GO:0051895"}


id: GO:0007636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The sudden, usually upward, movement off the ground or other surface through sudden muscular effort in the legs, following exposure to a chemical substance.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"jump response","termid":"GO:0007630"},{"relation_name":"is_a","term_name":"chemosensory behavior","termid":"GO:0007635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemosensory jump behavior","synonyms":[{"name":"chemosensory jump behaviour","type":"exact"},{"name":"jump response to chemical stimulus","type":"exact"}],"termid":"GO:0007636"}


id: PBO:0004868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp42 (predicted)","termid":"PBO:0004868"}


id: PBO:0026704
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_tyrosine_level","termid":"PBO:0026704"}


id: GO:0051746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cyclization of 3(S)-oxidosqualene to (3S,13S,14R)-malabarica-8,17,21-trien-3-ol (thalianol).","definition_xrefs":["PMID:15125655","RHEA:26160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidosqualene cyclase activity","termid":"GO:0031559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"thalianol synthase activity","secondary_identifiers":["EC:5.4.99.31"],"termid":"GO:0051746"}


id: PBO:0026981
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete_prospore_membrane_closure","termid":"PBO:0026981"}


id: GO:0016730
data:
  {"annotated_genes":["SJAG_01063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008860"},{"annotations":[105738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004324"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which an iron-sulfur protein acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on iron-sulfur proteins as donors","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.18.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on iron-sulphur proteins as donors","type":"exact"}],"termid":"GO:0016730","terms_by_termid":{"GO:0004324":null,"GO:0008860":null}}


id: MOD:00208
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-tyrosine residue and 5'-phosphoadenosine through a phosphodiester bond to form O4'-(phospho-5'-adenosine)-L-tyrosine.","definition_xrefs":["DeltaMass:0","PubMed:5543675","Unimod:405#Y","RESID:AA0203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"adenylated residue","termid":"MOD:01165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-(phospho-5'-adenosine)-L-tyrosine","synonyms":[{"name":"(2S)-2-amino-3-[4-(5'-adenosine phosphonoxy)phenyl]propanoic acid","type":"exact"},{"name":"5'-adenylic-O-tyrosine","type":"exact"},{"name":"AMP binding site","type":"related"},{"name":"MOD_RES O-AMP-tyrosine","type":"exact"},{"name":"O-5'-Adenosylation ( of Tyrosine)","type":"exact"},{"name":"O4'-(phospho-5'-adenosine)-L-tyrosine","type":"exact"},{"name":"O4'-L-tyrosine 5'-adenosine phosphodiester","type":"exact"},{"name":"OAMPTyr","type":"exact"},{"name":"Phosphoadenosine","type":"related"},{"name":"hydrogen 5'-adenylate tyrosine ester","type":"exact"}],"termid":"MOD:00208"}


id: PBO:0000559
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.11.9","termid":"PBO:0000559"}


id: PBO:0028538
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_binding_during_cellular_response_to_salt_stress","termid":"PBO:0028538"}


id: GO:0120103
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which assembles on the mother centriole during cilium formation, adjacent and proximal to a centriolar distal appendage. In human, it contains ODF2, CNTRL, NIN, CCDC120c and CCDC68.","definition_xrefs":["PMID:27818179","PMID:28422092","GOC:cilia","PMID:23213374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"centriolar subdistal appendage","synonyms":[{"name":"subdistal appendage of basal body","type":"exact"},{"name":"subdistal appendage of centriole","type":"exact"},{"name":"subdistal appendage of mother centriole","type":"exact"}],"termid":"GO:0120103"}


id: PR:P32235
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gtp1 gene.","definition_xrefs":["UniProtKB:P32235","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC354.01","synonyms":[{"name":"Spom972h-gtp1","type":"exact"}],"termid":"PR:P32235"}


id: GO:0036399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a TCR signalosome.","definition_xrefs":["GOC:krc","PMID:22426112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"TCR signalosome assembly","synonyms":[{"name":"LAT signalosome assembly","type":"exact"},{"name":"linker for activation of T cells signalosome assembly","type":"exact"}],"termid":"GO:0036399"}


id: PBO:0067795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 97","termid":"PBO:0067795"}


id: PR:O14147
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent DNA helicase DDX11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02244","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase chl1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.11","secondary_identifiers":["UniProtKB:O14147"],"synonyms":[{"name":"Spom972h-DDX11","type":"exact"},{"name":"chromosome loss protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14147"}


id: GO:0048811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the analia of the male are generated and organized. The analia is the posterior-most vertral appendage that develops from the genital disc.","definition_xrefs":["GOC:mtg_sensu","PMID:11494318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"analia morphogenesis","termid":"GO:0048809"},{"relation_name":"part_of","term_name":"male analia development","termid":"GO:0045496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male analia morphogenesis","termid":"GO:0048811"}


id: PBO:0027964
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_substance_in_cell_during_nitrogen_starvation","termid":"PBO:0027964"}


id: GO:0035782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a mature natural killer cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis). A mature natural killer cell is a natural killer cell that is developmentally mature and expresses a variety of inhibitory and activating receptors that recognize MHC class and other stress related molecules.","definition_xrefs":["GOC:BHF","CL:0000824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural killer cell chemotaxis","termid":"GO:0035747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mature natural killer cell chemotaxis","synonyms":[{"name":"activated natural killer cell chemotaxis","type":"exact"}],"termid":"GO:0035782"}


id: PBO:0044544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"death associated protein","termid":"PBO:0044544"}


id: PBO:0052587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine rich nucleolar protein 1 pseudogene 5","termid":"PBO:0052587"}


id: PATO:0001816
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A fatigability which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased strength","termid":"PATO:0001778"},{"relation_name":"is_a","term_name":"fatigability","termid":"PATO:0001815"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased fatigability","synonyms":[{"name":"high fatigability","type":"exact"}],"termid":"PATO:0001816"}


id: PBO:0055851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LDL receptor related protein 1B","termid":"PBO:0055851"}


id: PBO:0077941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 2-1","termid":"PBO:0077941"}


id: GO:0044135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The increase in size or mass of symbiont occurring on or near its host phyllosphere. The host phyllosphere is defined as total above-ground surfaces of a plant as a habitat for symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete growth of symbiont on or near host phyllosphere (obsolete GO:0044135)","termid":"GO:0044135"}


id: PBO:0081466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 337","termid":"PBO:0081466"}


id: FYPO:0004942
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the glycan moiety of a glycoprotein contains galactose and mannose residues in a normal (i.e. indistinguishable from wild type) ratio. In wild-type cells, glycoprotein glycans contain mannose and galactose residues in a 1:1.2 ratio, and the galactose residues are connected by alpha-1,2 linkages.","definition_xrefs":["PomBase:mah","PMID:8782411","PMID:11015724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257"],"is_obsolete":false,"name":"normal galactose:mannose ratio in glycoprotein glycan","synonyms":[{"name":"normal galactose:mannose ratio in glycoprotein oligosaccharide","type":"related"}],"termid":"FYPO:0004942"}


id: PBO:0091476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin Mvp1","termid":"PBO:0091476"}


id: PBO:0030726
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-filamentous_actin_absent","termid":"PBO:0030726"}


id: PBO:0053124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligand dependent nuclear receptor corepressor","termid":"PBO:0053124"}


id: PBO:0066879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 179","termid":"PBO:0066879"}


id: GO:1904681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 3-methylcholanthrene stimulus.","definition_xrefs":["GOC:TermGenie","GOC:mr","PMID:9224771","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to polycyclic arene","termid":"GO:1903165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 3-methylcholanthrene","termid":"GO:1904681"}


id: PBO:0042869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 99","termid":"PBO:0042869"}


id: SO:0000094
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from cyanelle sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"cyanelle_sequence","termid":"SO:0000746"},{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyanelle_gene","synonyms":[{"name":"cyanelle gene","type":"exact"}],"termid":"SO:0000094"}


id: PBO:0061547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase, cytosolic IB","termid":"PBO:0061547"}


id: PBO:0029013
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_chromosome_during_vegetative_growth","termid":"PBO:0029013"}


id: PBO:0112842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol N-acetylglucosaminyltransferase subunit pig-Q, Gpi1","termid":"PBO:0112842"}


id: GO:0004398
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-histidine = histamine + CO2.","definition_xrefs":["EC:4.1.1.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"histidine decarboxylase activity","secondary_identifiers":["MetaCyc:HISTIDINE-DECARBOXYLASE-RXN","Reactome:R-HSA-977301","RHEA:20840"],"synonyms":[{"name":"L-histidine carboxy-lyase (histamine-forming)","type":"related"},{"name":"L-histidine carboxy-lyase activity","type":"related"},{"name":"L-histidine decarboxylase activity","type":"related"}],"termid":"GO:0004398"}


id: PATO:0001113
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001113 absolute energy value (obsolete PATO:0001113)","termid":"PATO:0001113"}


id: GO:0098560
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the late endosome membrane that faces the cytoplasm.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of endosome membrane","termid":"GO:0010009"},{"relation_name":"part_of","term_name":"late endosome membrane","termid":"GO:0031902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005768","GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"cytoplasmic side of late endosome membrane","synonyms":[{"name":"external leaflet of late endosome membrane","type":"exact"},{"name":"external side of late endosome membrane","type":"exact"}],"termid":"GO:0098560"}


id: PBO:0030336
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_nitrogen_starvation","termid":"PBO:0030336"}


id: PR:O42995
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mis19 gene.","definition_xrefs":["UniProtKB:O42995","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein SPBC27B12.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.02","synonyms":[{"name":"Spom972h-mis19","type":"exact"}],"termid":"PR:O42995"}


id: PBO:0085612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in DNA repair; related to the human CSA protein that is involved in transcription-coupled repair nucleotide excision repair","termid":"PBO:0085612"}


id: PR:O13986
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gid5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C26H5.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.04","synonyms":[{"name":"Spom972h-gid5","type":"exact"}],"termid":"PR:O13986"}


id: PBO:0090802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPA1 sodium ion/proton antiporter","termid":"PBO:0090802"}


id: GO:2000879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dipeptide transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dipeptide transport","termid":"GO:0090089"},{"relation_name":"is_a","term_name":"negative regulation of oligopeptide transport","termid":"GO:2000877"},{"relation_name":"negatively_regulates","term_name":"dipeptide transport","termid":"GO:0042938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of dipeptide transport","termid":"GO:2000879"}


id: GO:0050255
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ribitol + NAD+ = D-ribulose + H+ + NADH.","definition_xrefs":["EC:1.1.1.56","RHEA:20053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"ribitol 2-dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:RIBITOL-2-DEHYDROGENASE-RXN","KEGG_REACTION:R01895"],"synonyms":[{"name":"adonitol dehydrogenase activity","type":"related"},{"name":"ribitol dehydrogenase A (wild type)","type":"related"},{"name":"ribitol dehydrogenase B (mutant enzyme with different properties)","type":"related"},{"name":"ribitol dehydrogenase D (mutant enzyme with different properties)","type":"related"},{"name":"ribitol:NAD+ 2-oxidoreductase activity","type":"related"}],"termid":"GO:0050255"}


id: GO:0002202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The somatic process that results in the generation of sequence diversity of the variable lymphocyte receptors (VLR) of jawless fish.","definition_xrefs":["GOC:add","PMID:16373579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic diversification of variable lymphocyte receptors of jawless fish","termid":"GO:0002202"}


id: GO:0042248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of an established polarized follicular epithelial sheet.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of polarity of follicular epithelium","termid":"GO:0016334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"maintenance of polarity of follicular epithelium","termid":"GO:0042248"}


id: PBO:0045283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 34","termid":"PBO:0045283"}


id: PBO:0051944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-tetrakisphosphate 1-kinase","termid":"PBO:0051944"}


id: PBO:0058810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7852","termid":"PBO:0058810"}


id: PBO:0013072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Prp38","termid":"PBO:0013072"}


id: PBO:0048460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucagon receptor","termid":"PBO:0048460"}


id: PBO:0066621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIC1 homolog, RAB6A GEF complex partner 1","termid":"PBO:0066621"}


id: SO:0000732
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing an unverified region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"status","termid":"SO:0000905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predicted","secondary_identifiers":["http://en.wikipedia.org/wiki/Predicted"],"termid":"SO:0000732"}


id: PBO:0080738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing E3 ubiquitin protein ligase 2","termid":"PBO:0080738"}


id: PBO:0108563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA recombination mediator Sfr1","termid":"PBO:0108563"}


id: GO:0016091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of prenols, isoprenoids of general formula (H-CH2-C(CH3)=CH-CH2-)n-OH, any primary monohydroxy alcohol whose carbon skeleton consists of two or more isoprenoid residues linked head to tail.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenoid biosynthetic process","termid":"GO:0008299"},{"relation_name":"is_a","term_name":"prenol metabolic process","termid":"GO:0016090"},{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"prenol biosynthetic process","synonyms":[{"name":"prenol anabolism","type":"exact"},{"name":"prenol biosynthesis","type":"exact"},{"name":"prenol formation","type":"exact"},{"name":"prenol synthesis","type":"exact"}],"termid":"GO:0016091"}


id: PBO:0088280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 6 Pam1","termid":"PBO:0088280"}


id: PBO:0072034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 4","termid":"PBO:0072034"}


id: PBO:0047047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 110 member B","termid":"PBO:0047047"}


id: PBO:0077676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF superfamily member 4","termid":"PBO:0077676"}


id: PR:Q9P7V5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec72 gene.","definition_xrefs":["UniProtKB:Q9P7V5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec72 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30.01c","synonyms":[{"name":"Spom972h-sec72","type":"exact"}],"termid":"PR:Q9P7V5"}


id: GO:0141178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont avoids the effects of recognition by host  complement by altering molecules on the symbiont surface. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:22825444","PMID:25537831","PMID:34887398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated evasion of recognition by host innate immune effector","termid":"GO:0141177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated evasion of recognition by host complement","synonyms":[{"name":"symbiont-mediated evasion of host complement","type":"exact"}],"termid":"GO:0141178"}


id: PBO:0029807
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions","termid":"PBO:0029807"}


id: GO:0010745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of macrophage derived foam cell differentiation. Macrophage derived foam cell differentiation is the process in which a macrophage acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macrophage derived foam cell differentiation","termid":"GO:0010743"},{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"negatively_regulates","term_name":"macrophage derived foam cell differentiation","termid":"GO:0010742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage derived foam cell differentiation","termid":"GO:0010745"}


id: FYPO:0005509
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic sister chromatid segregation is abnormal. Meiotic sister chromatid segregation is the process in which sister chromatids are organized and then physically separated and randomly apportioned to two sets during the second division of the meiotic cell cycle.","definition_xrefs":["PomBase:mah","GO:0045144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"},{"relation_name":"is_a","term_name":"abnormal meiosis II","termid":"FYPO:0006526"},{"relation_name":"is_a","term_name":"abnormal meiotic chromosome organization","termid":"FYPO:0006759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000641","FYPO:0000631"],"is_obsolete":false,"name":"abnormal meiotic sister chromatid segregation","synonyms":[{"name":"abnormal sister chromatid segregation during meiosis II","type":"exact"},{"name":"chromosome missegregation during meiosis II","type":"related"},{"name":"meiotic chromosome missegregation","type":"related"},{"name":"meiotic sister chromatid missegregation","type":"related"}],"termid":"FYPO:0005509"}


id: GO:0050998
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to nitric-oxide synthase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"nitric-oxide synthase binding","synonyms":[{"name":"NOS binding","type":"exact"}],"termid":"GO:0050998"}


id: PBO:0035840
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein-protein_interaction_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0035840"}


id: PBO:0070202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 127 pseudogene","termid":"PBO:0070202"}


id: GO:0018975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2,4,6-trinitrotoluene, 1-methyl-2,4,6-trinitrobenzene, a highly explosive pale yellow crystalline solid, that occur in the absence of oxygen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2,4,6-trinitrotoluene metabolic process","termid":"GO:0018974"},{"relation_name":"is_a","term_name":"toluene-containing compound catabolic process","termid":"GO:0072491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic 2,4,6-trinitrotoluene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:tnt2"],"synonyms":[{"name":"anaerobic 2,4,6-trinitrotoluene metabolism","type":"exact"}],"termid":"GO:0018975"}


id: PBO:0080779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related X-linked","termid":"PBO:0080779"}


id: PBO:0003991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructokinase (predicted)","termid":"PBO:0003991"}


id: PBO:0005679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBF1/Su(H)/LAG-1 family transcription factor Cbf12","termid":"PBO:0005679"}


id: FYPO:0005409
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell that has arrested the mitotic cell cycle G1 phase in response to nitrogen starvation is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during nitrogen starvation","termid":"FYPO:0004084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein level during cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","synonyms":[{"name":"normal cellular protein level during cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","type":"exact"},{"name":"normal protein accumulation during cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","type":"related"},{"name":"normal protein level during cell cycle arrest in mitotic G1 phase in response to nitrogen depletion","type":"exact"},{"name":"normal protein level during cell cycle arrest in mitotic G1 phase in response to nitrogen deprivation","type":"exact"},{"name":"normal protein level during mitotic G1 arrest in response to nitrogen starvation","type":"exact"},{"name":"normal protein level during nitrogen deprivation-induced G1 arrest","type":"exact"}],"termid":"FYPO:0005409"}


id: FYPO:0001546
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to zinc ion is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during cellular response to zinc ion","synonyms":[{"name":"decreased RNA accumulation during cellular response to zinc ion","type":"related"},{"name":"decreased RNA level during cellular response to zinc","type":"exact"},{"name":"decreased RNA level during cellular response to zinc ion during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to zinc ion during vegetative growth","type":"exact"},{"name":"decreased mRNA level during cellular response to zinc ion","type":"narrow"},{"name":"decreased transcript level during cellular response to zinc ion","type":"exact"},{"name":"reduced RNA level during cellular response to zinc ion","type":"exact"}],"termid":"FYPO:0001546"}


id: GO:0090307
data:
  {"annotated_genes":["SJAG_03835","SJAG_03540","SJAG_04901","SJAG_01297","SJAG_01224","SJAG_01546","SJAG_02609","SJAG_02246","SJAG_00773","SJAG_00794","SJAG_04464","SJAG_07018","SJAG_00244","SJAG_02761","SJAG_04745","SJAG_03073","SJAG_01613","SJAG_03062","SJAG_01215","SJAG_02332","SJAG_03116","SJAG_02336","SJAG_04841"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92838,92937,93354,96446,97047,105663,106641,111116,114730],"is_not":false,"summary":null,"term":"GO:0090307"},{"annotations":[74529,90825,91369],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"},{"annotations":[92835,99114,105080,95284],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990810"},{"annotations":[96448,104316,90829,97495,93355,94687,95914,99966],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061804"},{"annotations":[97496,95290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140641"},{"annotations":[93356,95291,90830,104907,97497],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051256"},{"annotations":[107496],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0110161"},{"annotations":[107073],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1901673"}]},"cv_name":"biological_process","definition":"Mitotic bipolar spindle assembly begins with spindle microtubule nucleation from the separated spindle pole body, includes spindle elongation during prometaphase, and is complete when all kinetochores are stably attached the spindle, and the spindle assembly checkpoint is satisfied.","definition_xrefs":["GOC:vw","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle organization","termid":"GO:0007052"},{"relation_name":"is_a","term_name":"spindle assembly","termid":"GO:0051225"},{"relation_name":"part_of","term_name":"mitotic sister chromatid segregation","termid":"GO:0000070"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00773":null,"SJAG_00794":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_02246":null,"SJAG_02332":null,"SJAG_02336":null,"SJAG_02609":null,"SJAG_02761":null,"SJAG_03062":null,"SJAG_03073":null,"SJAG_03116":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_04464":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04901":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000070","GO:0000226","GO:0044085","GO:0007010","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic spindle assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"spindle assembly involved in mitosis","type":"exact"}],"termid":"GO:0090307","terms_by_termid":{"GO:0000073":null,"GO:0051256":null,"GO:0061804":null,"GO:0090307":null,"GO:0110161":null,"GO:0140641":null,"GO:1901673":null,"GO:1990810":null}}


id: FYPO:0007996
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in mitotic interphase in which cells form actin cables that are thinner than normal. This is evidence by lower actin fluorescence signal and is likely due to the presence of fewer actin filaments than normal.","definition_xrefs":["PomBase:mlr","PMID:15184402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cable morphology","termid":"FYPO:0002031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0004803","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"thin actin cables","termid":"FYPO:0007996"}


id: PR:000046671
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor sre2 (Schizosaccharomyces pombe) that has not been processed by proteolytic cleavage.","definition_xrefs":["PMID:23729666","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor sre2 (Schizosaccharomyces pombe)","termid":"PR:000046670"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sre2P","pombase_gene_id":"SPBC354.05c","synonyms":[{"name":"PomBase_original_PRO_term_name: transcription factor sre2, Sre2P form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-sre2/Sre2P","type":"exact"},{"name":"Sre2P","type":"exact"},{"name":"sre2 precursor (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000046671"}


id: SO:0001140
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Gamma turns, defined for 3 residues i, i+1, i+2 if a hydrogen bond exists between residues i and i+2 and the phi and psi angles of residue i+1 fall within 40 degrees: phi(i+1)=-79.0 - psi(i+1)=69.0.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma_turn","termid":"SO:0001138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"gamma_turn_inverse","secondary_identifiers":["BS:00221"],"synonyms":[{"name":"gamma turn inverse","type":"exact"}],"termid":"SO:0001140"}


id: PBO:0047649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 4 pseudogene 2","termid":"PBO:0047649"}


id: PBO:0089046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug130","termid":"PBO:0089046"}


id: PBO:0054740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2149","termid":"PBO:0054740"}


id: PBO:0076751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teratocarcinoma-derived growth factor 1 pseudogene 1","termid":"PBO:0076751"}


id: GO:0019258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 4-nitrotoluene, 1-methyl-4-nitrobenzene.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-nitrotoluene metabolic process","termid":"GO:0019257"},{"relation_name":"is_a","term_name":"nitrotoluene catabolic process","termid":"GO:0046263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"4-nitrotoluene catabolic process","secondary_identifiers":["MetaCyc:P421-PWY"],"synonyms":[{"name":"4-nitrotoluene breakdown","type":"exact"},{"name":"4-nitrotoluene catabolism","type":"exact"},{"name":"4-nitrotoluene degradation","type":"exact"},{"name":"4NT catabolic process","type":"exact"},{"name":"4NT catabolism","type":"exact"}],"termid":"GO:0019258"}


id: GO:0043251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, sodium-dependent, movement of organic anions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"sodium-dependent organic anion transport","termid":"GO:0043251"}


id: GO:0002861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of an inflammatory response to an antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inflammatory response","termid":"GO:0050727"},{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"inflammatory response to antigenic stimulus","termid":"GO:0002437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of inflammatory response to antigenic stimulus","termid":"GO:0002861"}


id: PBO:0062232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 12","termid":"PBO:0062232"}


id: GO:0071213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 1-aminocyclopropane-1-carboxylic acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to 1-aminocyclopropane-1-carboxylic acid","termid":"GO:0009961"},{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to 1-aminocyclopropane-1-carboxylic acid","termid":"GO:0071213"}


id: PBO:0000574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG repeat","termid":"PBO:0000574"}


id: GO:0034157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 7 signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 7 signaling pathway","termid":"GO:0034155"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 7 signaling pathway","termid":"GO:0034154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 7 signaling pathway","synonyms":[{"name":"positive regulation of TLR7 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 7 signalling pathway","type":"exact"}],"termid":"GO:0034157"}


id: PBO:0082798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of transport protein particle (TRAPP) complex II; TRAPPII is a multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating intra-Golgi and endosome-Golgi traffic","termid":"PBO:0082798"}


id: GO:0141201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A inflammatory cell death process associated with the generation of pyrogenic mediators that result from the activation of gasdermins.","definition_xrefs":["PMID:33883744","PMID:18846107","PMID:21760595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"},{"relation_name":"is_a","term_name":"pyroptotic inflammatory response","termid":"GO:0070269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyroptotic cell death","synonyms":[{"name":"pyroptosis","type":"broad"}],"termid":"GO:0141201"}


id: PBO:0079874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF3A pseudogene 1","termid":"PBO:0079874"}


id: PBO:0045361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double PHD fingers 1","termid":"PBO:0045361"}


id: GO:0072214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric cortex over time, from its formation to the mature structure. The metanephric cortex is the outer region of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchyme development","termid":"GO:0060485"},{"relation_name":"is_a","term_name":"renal cortex development","termid":"GO:0072055"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric cortex development","termid":"GO:0072214"}


id: PBO:0003982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type II protein arginine N-methyltransferase Skb1","termid":"PBO:0003982"}


id: PBO:0079535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2SURP pseudogene 1","termid":"PBO:0079535"}


id: GO:0006236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that generates cytidine, cytosine riboside, from derivatives of it without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside salvage","termid":"GO:0043097"},{"relation_name":"is_a","term_name":"cytidine biosynthetic process","termid":"GO:0046088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"cytidine salvage","termid":"GO:0006236"}


id: GO:0031984
data:
  {"annotated_genes":["SJAG_01180","SJAG_04338","SJAG_02717","SJAG_03933","SJAG_01991","SJAG_02804","SJAG_00295","SJAG_02120","SJAG_03032","SJAG_00810","SJAG_00846","SJAG_03311","SJAG_00784","SJAG_02065","SJAG_00296","SJAG_04881","SJAG_01558","SJAG_01860","SJAG_02044","SJAG_00669","SJAG_01223","SJAG_02903","SJAG_00681","SJAG_04217","SJAG_02716","SJAG_02080","SJAG_03764","SJAG_00730","SJAG_04938","SJAG_03756","SJAG_02204","SJAG_03115","SJAG_03609","SJAG_02208","SJAG_00812","SJAG_03066","SJAG_01709","SJAG_00893","SJAG_04090","SJAG_01233","SJAG_01422","SJAG_04340","SJAG_01537","SJAG_04701","SJAG_00831","SJAG_04110","SJAG_04435","SJAG_02489","SJAG_04956","SJAG_07010","SJAG_04053","SJAG_01990","SJAG_03953","SJAG_01642","SJAG_00567","SJAG_00519","SJAG_00277","SJAG_03396","SJAG_03878","SJAG_00630","SJAG_04583","SJAG_05219","SJAG_00771","SJAG_01460","SJAG_02902","SJAG_02914","SJAG_00816","SJAG_01069","SJAG_01527","SJAG_01227","SJAG_04471","SJAG_03750","SJAG_04915","SJAG_03831","SJAG_05278","SJAG_05311","SJAG_03670","SJAG_03634","SJAG_03347","SJAG_02032","SJAG_01516","SJAG_02177","SJAG_04059","SJAG_01329","SJAG_01307","SJAG_04451","SJAG_03247","SJAG_02523","SJAG_05330","SJAG_05189","SJAG_00959","SJAG_05296","SJAG_02640","SJAG_02240","SJAG_03657","SJAG_00064","SJAG_02839","SJAG_00434","SJAG_01051","SJAG_00437","SJAG_05414","SJAG_05022","SJAG_02980","SJAG_01957","SJAG_03943","SJAG_03850","SJAG_03244","SJAG_04162","SJAG_00895","SJAG_02019","SJAG_03506","SJAG_04740","SJAG_03509","SJAG_02776","SJAG_03672","SJAG_06514","SJAG_00948","SJAG_01276","SJAG_01945","SJAG_01633","SJAG_03929","SJAG_01001","SJAG_01134","SJAG_04417","SJAG_02842","SJAG_01857","SJAG_04954","SJAG_04018","SJAG_02418","SJAG_01435","SJAG_01570","SJAG_04770","SJAG_05348","SJAG_03281","SJAG_02867","SJAG_02525","SJAG_02264","SJAG_04127","SJAG_00747","SJAG_04049","SJAG_02056","SJAG_03795","SJAG_03718","SJAG_02437","SJAG_03278","SJAG_04319","SJAG_02354","SJAG_02588","SJAG_00999","SJAG_03235","SJAG_01321","SJAG_02488","SJAG_04819","SJAG_00919","SJAG_00330","SJAG_03774","SJAG_03024","SJAG_00880","SJAG_01168","SJAG_04345","SJAG_01785","SJAG_03292","SJAG_02532","SJAG_02168","SJAG_03812","SJAG_03315","SJAG_00328","SJAG_00334","SJAG_01416","SJAG_00370","SJAG_01127","SJAG_00068","SJAG_00261","SJAG_01078","SJAG_02590","SJAG_01356","SJAG_05016","SJAG_01939","SJAG_03555","SJAG_04883","SJAG_04952","SJAG_02102","SJAG_03992","SJAG_02446","SJAG_03333","SJAG_04384","SJAG_02912","SJAG_02196","SJAG_04095","SJAG_00924","SJAG_02827","SJAG_00825","SJAG_04023","SJAG_01848","SJAG_05327","SJAG_00453","SJAG_04548","SJAG_03663","SJAG_00906","SJAG_00603","SJAG_02683","SJAG_00355","SJAG_02595","SJAG_04615","SJAG_04592","SJAG_00557","SJAG_01448","SJAG_02586","SJAG_04413","SJAG_03801","SJAG_00785","SJAG_04358","SJAG_03737","SJAG_04821","SJAG_04337","SJAG_01563","SJAG_00222","SJAG_00360","SJAG_03056","SJAG_04739","SJAG_04513","SJAG_01626","SJAG_00053","SJAG_00131","SJAG_02085","SJAG_02330","SJAG_03955","SJAG_01750","SJAG_00426","SJAG_02885","SJAG_01025","SJAG_00284","SJAG_06383","SJAG_03170","SJAG_00530","SJAG_01300","SJAG_03345","SJAG_02913","SJAG_02982","SJAG_02706","SJAG_03715","SJAG_01488","SJAG_04294","SJAG_04975","SJAG_06425","SJAG_04608","SJAG_03656","SJAG_03930","SJAG_03261","SJAG_04398","SJAG_03330","SJAG_04119","SJAG_00790","SJAG_03841","SJAG_00175","SJAG_00554","SJAG_05306","SJAG_04904","SJAG_03018","SJAG_01409","SJAG_04363","SJAG_01389","SJAG_01006","SJAG_04986","SJAG_05209","SJAG_05013","SJAG_01899","SJAG_04165","SJAG_00717","SJAG_04913","SJAG_02694","SJAG_03162","SJAG_01491","SJAG_04792","SJAG_01160","SJAG_04103","SJAG_01782","SJAG_02719","SJAG_01999","SJAG_01950","SJAG_04550","SJAG_01571","SJAG_04316","SJAG_04270","SJAG_04810","SJAG_04231","SJAG_01803","SJAG_00394","SJAG_05274","SJAG_00339","SJAG_04112"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[107722,115589,114741,91743,110246,87530,100429,104693,97531,105675,114939,110466,112291,115009,115590,84538,103444,86462,89720,84828,114650,91381,90298,99515,102368,108118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032541"},{"annotations":[89135],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0099021"},{"annotations":[94738,94404,91136,89954,105897,98361,90771,101881,112817],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0098554"},{"annotations":[100834,90884,109905,99577,110454,97248,108312,87712],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0072546"},{"annotations":[107365,113692,67332,97661,106961,111925,84589,96078,89722,89691,103356,93403,105333,109184,114866,100146,110846,83908,85896,90569,100041,103600,84625,97284,90693,94165,99104,93026,91771,107143,104067,107869,100536,99173,110275,112208,92772,92249,86354,97134,106166,89583,106200,111281,114689,113054,94907,96067,87986,87575,99067,103445,85628,108432,106802,92608,88590,90445,92965,110851,85729,88190,112819,96352,112627,101256,91575,94878,105293,109693,113455,90703,91676,104473,92400,96827,100431,114386,106124,113896,110963,105847,94460,85614,99248,85566,84830,94655,88057,86307,109533,100745,87949,107381,94263,111841,92849,107514,97072,93513,108596,59647,96888,86623,84988,103581,108615,100650,105963,58961,83863,87273,110741,110468,103545,86464,92151,89819,96306,89081,89820,60962,99838,106885,110397,107045,101024,84718,87226,100514,109461,94428,111677,84299,86649,89606,106086,114940,104783,110405,110258,109078,96287,97398,88918,103761,104075,97597,90273,102765,103897,101927,84540,87851,89101,108120,111302,110249,92485,99470,102027,97532,99165,62173,108418,98218,104714,85722],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005789"},{"annotations":[111031,99517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071782"},{"annotations":[63967,104694,114651,115186],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0098826"},{"annotations":[113311,89131,105977,89043,104637,107661],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000506"},{"annotations":[92111,113042],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0000137"},{"annotations":[94769],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0031985"},{"annotations":[94156,109131,86389,97216],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0005797"},{"annotations":[92476,91613,106903,87216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005795"},{"annotations":[95564,86390,92112,97217,109132],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0000138"},{"annotations":[87446,88271,83510,110009,99777],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042765"},{"annotations":[100033,105614,100865,113230,85317,103728,101342],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000836"},{"annotations":[85581],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990604"},{"annotations":[94456,101045,96051,86433,105340,90773,87176,95844],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0098553"},{"annotations":[108760],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000136"},{"annotations":[100993,93947,83575,114111],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140497"},{"annotations":[96087,91384,95704,97408,112926,113391,98630],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0008250"},{"annotations":[104451,87294],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0160005"},{"annotations":[102372,94717,83447,111672,90774,93863,96657],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990578"},{"annotations":[94111,102213,104362,105385],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005784"},{"annotations":[105678,86638,106457,91799],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031207"},{"annotations":[99882,83717,108619,94479],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005787"},{"annotations":[105804,90336],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005785"},{"annotations":[94112],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071261"},{"annotations":[95968,86792,89228,96249,84726,94771,91793,99437,95568,95529,100127,88329,108552,100449,97621,88177,98724,113694,88946,114561,95106,92759,95821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005802"},{"annotations":[103421,87266,89269,86793,91794],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032588"},{"annotations":[94405,94740,99635],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043541"},{"annotations":[100036,85321],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034098"}]},"cv_name":"cellular_component","definition":"A compartment that consists of a lumen and an enclosing membrane, and is part of an organelle.","definition_xrefs":["GOC:mah","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"membrane-bounded organelle","termid":"GO:0043227"},{"relation_name":"part_of","term_name":"intracellular organelle","termid":"GO:0043229"}],"gene_count":291,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00064":null,"SJAG_00068":null,"SJAG_00131":null,"SJAG_00175":null,"SJAG_00222":null,"SJAG_00261":null,"SJAG_00277":null,"SJAG_00284":null,"SJAG_00295":null,"SJAG_00296":null,"SJAG_00328":null,"SJAG_00330":null,"SJAG_00334":null,"SJAG_00339":null,"SJAG_00355":null,"SJAG_00360":null,"SJAG_00370":null,"SJAG_00394":null,"SJAG_00426":null,"SJAG_00434":null,"SJAG_00437":null,"SJAG_00453":null,"SJAG_00519":null,"SJAG_00530":null,"SJAG_00554":null,"SJAG_00557":null,"SJAG_00567":null,"SJAG_00603":null,"SJAG_00630":null,"SJAG_00669":null,"SJAG_00681":null,"SJAG_00717":null,"SJAG_00730":null,"SJAG_00747":null,"SJAG_00771":null,"SJAG_00784":null,"SJAG_00785":null,"SJAG_00790":null,"SJAG_00810":null,"SJAG_00812":null,"SJAG_00816":null,"SJAG_00825":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_00880":null,"SJAG_00893":null,"SJAG_00895":null,"SJAG_00906":null,"SJAG_00919":null,"SJAG_00924":null,"SJAG_00948":null,"SJAG_00959":null,"SJAG_00999":null,"SJAG_01001":null,"SJAG_01006":null,"SJAG_01025":null,"SJAG_01051":null,"SJAG_01069":null,"SJAG_01078":null,"SJAG_01127":null,"SJAG_01134":null,"SJAG_01160":null,"SJAG_01168":null,"SJAG_01180":null,"SJAG_01223":null,"SJAG_01227":null,"SJAG_01233":null,"SJAG_01276":null,"SJAG_01300":null,"SJAG_01307":null,"SJAG_01321":null,"SJAG_01329":null,"SJAG_01356":null,"SJAG_01389":null,"SJAG_01409":null,"SJAG_01416":null,"SJAG_01422":null,"SJAG_01435":null,"SJAG_01448":null,"SJAG_01460":null,"SJAG_01488":null,"SJAG_01491":null,"SJAG_01516":null,"SJAG_01527":null,"SJAG_01537":null,"SJAG_01558":null,"SJAG_01563":null,"SJAG_01570":null,"SJAG_01571":null,"SJAG_01626":null,"SJAG_01633":null,"SJAG_01642":null,"SJAG_01709":null,"SJAG_01750":null,"SJAG_01782":null,"SJAG_01785":null,"SJAG_01803":null,"SJAG_01848":null,"SJAG_01857":null,"SJAG_01860":null,"SJAG_01899":null,"SJAG_01939":null,"SJAG_01945":null,"SJAG_01950":null,"SJAG_01957":null,"SJAG_01990":null,"SJAG_01991":null,"SJAG_01999":null,"SJAG_02019":null,"SJAG_02032":null,"SJAG_02044":null,"SJAG_02056":null,"SJAG_02065":null,"SJAG_02080":null,"SJAG_02085":null,"SJAG_02102":null,"SJAG_02120":null,"SJAG_02168":null,"SJAG_02177":null,"SJAG_02196":null,"SJAG_02204":null,"SJAG_02208":null,"SJAG_02240":null,"SJAG_02264":null,"SJAG_02330":null,"SJAG_02354":null,"SJAG_02418":null,"SJAG_02437":null,"SJAG_02446":null,"SJAG_02488":null,"SJAG_02489":null,"SJAG_02523":null,"SJAG_02525":null,"SJAG_02532":null,"SJAG_02586":null,"SJAG_02588":null,"SJAG_02590":null,"SJAG_02595":null,"SJAG_02640":null,"SJAG_02683":null,"SJAG_02694":null,"SJAG_02706":null,"SJAG_02716":null,"SJAG_02717":null,"SJAG_02719":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02827":null,"SJAG_02839":null,"SJAG_02842":null,"SJAG_02867":null,"SJAG_02885":null,"SJAG_02902":null,"SJAG_02903":null,"SJAG_02912":null,"SJAG_02913":null,"SJAG_02914":null,"SJAG_02980":null,"SJAG_02982":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03032":null,"SJAG_03056":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03162":null,"SJAG_03170":null,"SJAG_03235":null,"SJAG_03244":null,"SJAG_03247":null,"SJAG_03261":null,"SJAG_03278":null,"SJAG_03281":null,"SJAG_03292":null,"SJAG_03311":null,"SJAG_03315":null,"SJAG_03330":null,"SJAG_03333":null,"SJAG_03345":null,"SJAG_03347":null,"SJAG_03396":null,"SJAG_03506":null,"SJAG_03509":null,"SJAG_03555":null,"SJAG_03609":null,"SJAG_03634":null,"SJAG_03656":null,"SJAG_03657":null,"SJAG_03663":null,"SJAG_03670":null,"SJAG_03672":null,"SJAG_03715":null,"SJAG_03718":null,"SJAG_03737":null,"SJAG_03750":null,"SJAG_03756":null,"SJAG_03764":null,"SJAG_03774":null,"SJAG_03795":null,"SJAG_03801":null,"SJAG_03812":null,"SJAG_03831":null,"SJAG_03841":null,"SJAG_03850":null,"SJAG_03878":null,"SJAG_03929":null,"SJAG_03930":null,"SJAG_03933":null,"SJAG_03943":null,"SJAG_03953":null,"SJAG_03955":null,"SJAG_03992":null,"SJAG_04018":null,"SJAG_04023":null,"SJAG_04049":null,"SJAG_04053":null,"SJAG_04059":null,"SJAG_04090":null,"SJAG_04095":null,"SJAG_04103":null,"SJAG_04110":null,"SJAG_04112":null,"SJAG_04119":null,"SJAG_04127":null,"SJAG_04162":null,"SJAG_04165":null,"SJAG_04217":null,"SJAG_04231":null,"SJAG_04270":null,"SJAG_04294":null,"SJAG_04316":null,"SJAG_04319":null,"SJAG_04337":null,"SJAG_04338":null,"SJAG_04340":null,"SJAG_04345":null,"SJAG_04358":null,"SJAG_04363":null,"SJAG_04384":null,"SJAG_04398":null,"SJAG_04413":null,"SJAG_04417":null,"SJAG_04435":null,"SJAG_04451":null,"SJAG_04471":null,"SJAG_04513":null,"SJAG_04548":null,"SJAG_04550":null,"SJAG_04583":null,"SJAG_04592":null,"SJAG_04608":null,"SJAG_04615":null,"SJAG_04701":null,"SJAG_04739":null,"SJAG_04740":null,"SJAG_04770":null,"SJAG_04792":null,"SJAG_04810":null,"SJAG_04819":null,"SJAG_04821":null,"SJAG_04881":null,"SJAG_04883":null,"SJAG_04904":null,"SJAG_04913":null,"SJAG_04915":null,"SJAG_04938":null,"SJAG_04952":null,"SJAG_04954":null,"SJAG_04956":null,"SJAG_04975":null,"SJAG_04986":null,"SJAG_05013":null,"SJAG_05016":null,"SJAG_05022":null,"SJAG_05189":null,"SJAG_05209":null,"SJAG_05219":null,"SJAG_05274":null,"SJAG_05278":null,"SJAG_05296":null,"SJAG_05306":null,"SJAG_05311":null,"SJAG_05327":null,"SJAG_05330":null,"SJAG_05348":null,"SJAG_05414":null,"SJAG_06383":null,"SJAG_06425":null,"SJAG_06514":null,"SJAG_07010":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"organelle subcompartment","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21802294":null,"PMID:33495454":null},"synonyms":[{"name":"suborganelle compartment","type":"exact"}],"termid":"GO:0031984","terms_by_termid":{"GO:0000136":null,"GO:0000137":null,"GO:0000138":null,"GO:0000506":null,"GO:0000836":null,"GO:0005784":null,"GO:0005785":null,"GO:0005787":null,"GO:0005789":null,"GO:0005795":null,"GO:0005797":null,"GO:0005802":null,"GO:0008250":null,"GO:0031207":null,"GO:0031985":null,"GO:0032541":null,"GO:0032588":null,"GO:0034098":null,"GO:0042765":null,"GO:0043541":null,"GO:0071261":null,"GO:0071782":null,"GO:0072546":null,"GO:0098553":null,"GO:0098554":null,"GO:0098826":null,"GO:0099021":null,"GO:0140497":null,"GO:0160005":null,"GO:1990578":null,"GO:1990604":null}}


id: PBO:0069071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 318, pseudogene","termid":"PBO:0069071"}


id: GO:1902934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isopentenol.","definition_xrefs":["GO_REF:0000068","GOC:mengo_curators","GOC:TermGenie","PMID:17693564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"organic hydroxy compound biosynthetic process","termid":"GO:1901617"},{"relation_name":"is_a","term_name":"isopentenol metabolic process","termid":"GO:1902933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"isopentenol biosynthetic process","synonyms":[{"name":"isopentenol anabolism","type":"exact"},{"name":"isopentenol biosynthesis","type":"exact"},{"name":"isopentenol formation","type":"exact"},{"name":"isopentenol synthesis","type":"exact"}],"termid":"GO:1902934"}


id: PBO:0089184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARP complex subunit Vps51","termid":"PBO:0089184"}


id: GO:0006118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transport of electrons from an electron donor to an electron acceptor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete electron transport (obsolete GO:0006118)","synonyms":[{"name":"6-phosphofructokinase reduction","type":"related"},{"name":"dihydrobiopterin reduction","type":"related"},{"name":"dihydrolipoamide reduction","type":"related"},{"name":"dihydrolipoylprotein reduction","type":"related"},{"name":"dihydropteridine reduction","type":"related"},{"name":"electron transfer","type":"exact"},{"name":"electron transport","type":"exact"},{"name":"other pathways of electron transport","type":"related"},{"name":"oxidized glutathione reduction","type":"related"},{"name":"protein-disulfide reduction","type":"related"}],"termid":"GO:0006118"}


id: SO:0001741
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene segment which when incorporated by somatic recombination in the final gene transcript results in a nonfunctional product.","definition_xrefs":["SO:hd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_segment","termid":"SO:3000000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogenic_gene_segment","synonyms":[{"name":"pseudogenic gene segment","type":"exact"}],"termid":"SO:0001741"}


id: GO:0051544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of elastin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of glycoprotein biosynthetic process","termid":"GO:0010560"},{"relation_name":"is_a","term_name":"regulation of elastin biosynthetic process","termid":"GO:0051543"},{"relation_name":"positively_regulates","term_name":"elastin biosynthetic process","termid":"GO:0051542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of elastin biosynthetic process","synonyms":[{"name":"activation of elastin biosynthetic process","type":"narrow"},{"name":"stimulation of elastin biosynthetic process","type":"narrow"},{"name":"up regulation of elastin biosynthetic process","type":"exact"},{"name":"up-regulation of elastin biosynthetic process","type":"exact"},{"name":"upregulation of elastin biosynthetic process","type":"exact"}],"termid":"GO:0051544"}


id: PBO:0085279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal matrix protein with naturally active promoter; well-conserved in fungi; localized to peroxisomes under physiological growth conditions; levels of some amino acids are altered upon both knockout and overexpression, suggesting potential involvement of Pxp2p in amino acid metabolism or related cellular metabolic processes (needs further study); GFP-fusion protein displays inherent dual localization with large proportion localizing to cytosol","termid":"PBO:0085279"}


id: PBO:0069212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 467, pseudogene","termid":"PBO:0069212"}


id: PATO:0000143
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000143 addictive substance (obsolete PATO:0000143)","termid":"PATO:0000143"}


id: PBO:0054298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1689","termid":"PBO:0054298"}


id: PBO:0090137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom22","termid":"PBO:0090137"}


id: PBO:0042002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC54 antisense RNA 1","termid":"PBO:0042002"}


id: GO:1902438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vanadate(3-) stimulus.","definition_xrefs":["GOC:TermGenie","GOC:di","PMID:7489911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vanadate(3-)","termid":"GO:1902438"}


id: PBO:0083706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-localized protein of unknown function","termid":"PBO:0083706"}


id: PBO:0073283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 4","termid":"PBO:0073283"}


id: GO:0019909
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and modulates of the activity of [pyruvate dehydrogenase (lipoamide)] phosphatase.","definition_xrefs":["GOC:ai","EC:3.1.3.43"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphatase regulator activity","termid":"GO:0019888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"[pyruvate dehydrogenase (lipoamide)] phosphatase regulator activity","synonyms":[{"name":"[pyruvate dehydrogenase (lipoamide)] phosphatase, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0019909"}


id: MOD:00211
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and a glycine residue by a thioester bond to form S-glycyl-L-cysteine.","definition_xrefs":["PubMed:3306404","ChEBI:22050","RESID:AA0206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(glycyl)-L-cysteine (Cys-Gly)","synonyms":[{"name":"(2R)-2-amino-3-[(aminoacetyl)sulfanyl]propanoic acid","type":"exact"},{"name":"1-(cystein-S-yl)-glycinate","type":"exact"},{"name":"ACT_SITE Glycyl thioester intermediate","type":"exact"},{"name":"S-(2-amino-1-oxoethyl)cysteine","type":"exact"},{"name":"S-(glycyl)-L-cysteine","type":"exact"},{"name":"XLNK-SCys-1Gly","type":"exact"},{"name":"glycine cysteine thioester","type":"exact"}],"termid":"MOD:00211"}


id: PR:Q9UT16
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP synthase mitochondrial F1 complex assembly factor 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein atp12, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.12c","secondary_identifiers":["UniProtKB:Q9UT16"],"synonyms":[{"name":"Spom972h-ATPAF2","type":"exact"}],"termid":"PR:Q9UT16"}


id: PBO:0078318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta diversity 3","termid":"PBO:0078318"}


id: PR:O13629
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lipoyltransferase 1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02855","PANTHER:PTHR12561:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoate-protein ligase A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.09c","secondary_identifiers":["UniProtKB:O13629"],"synonyms":[{"name":"Spom972h-LIPT1","type":"exact"}],"termid":"PR:O13629"}


id: GO:0106074
data:
  {"annotated_genes":["SJAG_04285","SJAG_03545","SJAG_02428","SJAG_04738","SJAG_00443","SJAG_02015","SJAG_01797","SJAG_01259","SJAG_01248"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[56838,56922,57702,58758,60952,60953,60954,62930,63589,63630,66028,96510],"is_not":false,"summary":null,"term":"GO:0106074"}]},"cv_name":"biological_process","definition":"Any process which detects an amino-acid acetylated tRNA is charged with the correct amino acid, or removes incorrect amino acids from a charged tRNA. This process can be performed by tRNA synthases, or by subsequent reactions after tRNA aminoacylation.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA metabolic process","termid":"GO:0006399"},{"relation_name":"is_a","term_name":"regulation of translational fidelity","termid":"GO:0006450"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00443":null,"SJAG_01248":null,"SJAG_01259":null,"SJAG_01797":null,"SJAG_02015":null,"SJAG_02428":null,"SJAG_03545":null,"SJAG_04285":null,"SJAG_04738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006399"],"is_obsolete":false,"name":"aminoacyl-tRNA metabolism involved in translational fidelity","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"aminoacyl-tRNA correction","type":"related"},{"name":"aminoacyl-tRNA editin","type":"related"},{"name":"aminoacyl-tRNA proofreading","type":"related"}],"termid":"GO:0106074","terms_by_termid":{"GO:0106074":null}}


id: GO:0016167
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with glial cell line-derived neurotrophic factor and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"glial cell-derived neurotrophic factor receptor activity","synonyms":[{"name":"GDNF receptor activity","type":"exact"},{"name":"glial cell line-derived neurotrophic factor receptor activity","type":"exact"}],"termid":"GO:0016167"}


id: PBO:0002327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor C complex subunit Rfc3","termid":"PBO:0002327"}


id: GO:0090214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of the spongiotrophoblast layer of the placenta where the increase in size or mass contributes to the progression of that layer over time from its formation to its mature state.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"spongiotrophoblast layer development","termid":"GO:0060712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spongiotrophoblast layer developmental growth","termid":"GO:0090214"}


id: PBO:0065518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypyrimidine tract binding protein 3","termid":"PBO:0065518"}


id: PBO:0047263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 242 member F","termid":"PBO:0047263"}


id: PR:Q09866
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein mio that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00133","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C12G12.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.01c","secondary_identifiers":["UniProtKB:Q09866"],"synonyms":[{"name":"Spom972h-MIOS","type":"exact"}],"termid":"PR:Q09866"}


id: PBO:0036145
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_transport_on_microtubule_tip_to_cell_tip_cortex_during_vegetative_growth","termid":"PBO:0036145"}


id: GO:0043817
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R)-O-phospho-3-sulfolactate = phosphoenolpyruvate + sulfite.","definition_xrefs":["RHEA:22784","EC:4.4.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"phosphosulfolactate synthase activity","secondary_identifiers":["MetaCyc:4.4.1.19-RXN","KEGG_REACTION:R07476"],"synonyms":[{"name":"(2R)-O-phospho-3-sulfolactate sulfo-lyase (phosphoenolpyruvate-forming)","type":"related"},{"name":"(2R)-O-phospho-3-sulfolactate sulfo-lyase activity","type":"exact"},{"name":"(2R)-phospho-3-sulfolactate synthase activity","type":"related"},{"name":"PSL synthase activity","type":"related"}],"termid":"GO:0043817"}


id: PBO:0076754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teratocarcinoma-derived growth factor 1 pseudogene 4","termid":"PBO:0076754"}


id: PBO:0001163
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene structure conflict","termid":"PBO:0001163"}


id: PBO:0011133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydropteroatesynthase/2-amino-4-hydroxy-6-hydro xymethyldihydropteridinediphosphokinase/dihydroneopterin aldolase (predicted)","termid":"PBO:0011133"}


id: PBO:0074773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3F","termid":"PBO:0074773"}


id: PATO:0000415
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being not curled or wound (especially in concentric rings or spirals).","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coiling","termid":"PATO:0001794"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncoiled","termid":"PATO:0000415"}


id: GO:0030613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a phosphorus- or arsenic-containing group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["EC:1.20.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors","synonyms":[{"name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, with other acceptors","type":"narrow"}],"termid":"GO:0030613"}


id: PBO:0050378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 2","termid":"PBO:0050378"}


id: PR:Q9P374
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC19B12.07c gene.","definition_xrefs":["UniProtKB:Q9P374","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein C19B12.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.07c","synonyms":[{"name":"Spom972h-SPAC19B12.07c","type":"exact"}],"termid":"PR:Q9P374"}


id: PBO:0005861
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"named from map position ade5","termid":"PBO:0005861"}


id: PBO:0058099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4315-1","termid":"PBO:0058099"}


id: GO:0061247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesonephric glomerular mesangium over time, from its formation to the mature structure. The mesonephric glomerular mesangium is the thin membrane connective tissue composed of mesangial cells in the mesonephros, which helps to support the capillary loops in a renal glomerulus.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular mesangium development","termid":"GO:0072109"},{"relation_name":"part_of","term_name":"mesonephric glomerulus vasculature development","termid":"GO:0061231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular mesangium development","termid":"GO:0061247"}


id: PBO:0063394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCD6IP pseudogene 1","termid":"PBO:0063394"}


id: GO:0004842
data:
  {"annotated_genes":["SJAG_00931","SJAG_00561","SJAG_03006","SJAG_04966","SJAG_03970","SJAG_04857","SJAG_04990","SJAG_01992","SJAG_00500","SJAG_03112","SJAG_02521","SJAG_01533","SJAG_01212","SJAG_04573","SJAG_00111","SJAG_02918","SJAG_05274","SJAG_01772","SJAG_01854","SJAG_01593","SJAG_04600","SJAG_01637","SJAG_04612","SJAG_02308","SJAG_03613","SJAG_00341","SJAG_01535","SJAG_04151","SJAG_00509","SJAG_00552","SJAG_05323","SJAG_00819","SJAG_02371","SJAG_03968","SJAG_00173","SJAG_00208","SJAG_01507","SJAG_04619","SJAG_05264","SJAG_02668","SJAG_04429","SJAG_02685","SJAG_04309","SJAG_05340","SJAG_00293","SJAG_02169","SJAG_03618","SJAG_02851","SJAG_00475","SJAG_01165","SJAG_03860","SJAG_02575","SJAG_02319","SJAG_00188","SJAG_02746","SJAG_01360","SJAG_05022","SJAG_00435","SJAG_04783","SJAG_00209","SJAG_03191","SJAG_02347","SJAG_03657","SJAG_01900","SJAG_05236","SJAG_03005","SJAG_00300","SJAG_02299","SJAG_03175","SJAG_03387","SJAG_00855","SJAG_01253","SJAG_04915","SJAG_01679","SJAG_03615","SJAG_03831","SJAG_03883","SJAG_03324"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93451],"is_not":false,"summary":null,"term":"GO:0004842"},{"annotations":[112289,114910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140850"},{"annotations":[90410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140851"},{"annotations":[109054,112867,110340,84239,98176,87293,83868,84082,98328,98036,102501,104232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061631"},{"annotations":[91875,92851,94601,78785,84964,101345,85405,99091,104932,106019,84161,100422,101287,108149,97365,87728,92665,101034,101944,106018,109731,101006,85788,106288,110393,90411,110073,109639,89624,113279,85857,84093,92767,109463,84382,92581,99489,86787,108882,84083,97930,87122,105695,111484,112785,85960,84704,85612,91455,104059,96320,97246,102921,103005,84297,100353,103923,114503,86266,88816,113319,95455,99474,112784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061630"},{"annotations":[88747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034450"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y = Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.","definition_xrefs":["GOC:jh2","PMID:9635407","GOC:BioGRID"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase activity","termid":"GO:0019787"}],"gene_count":78,"genes_by_uniquename":{"SJAG_00111":null,"SJAG_00173":null,"SJAG_00188":null,"SJAG_00208":null,"SJAG_00209":null,"SJAG_00293":null,"SJAG_00300":null,"SJAG_00341":null,"SJAG_00435":null,"SJAG_00475":null,"SJAG_00500":null,"SJAG_00509":null,"SJAG_00552":null,"SJAG_00561":null,"SJAG_00819":null,"SJAG_00855":null,"SJAG_00931":null,"SJAG_01165":null,"SJAG_01212":null,"SJAG_01253":null,"SJAG_01360":null,"SJAG_01507":null,"SJAG_01533":null,"SJAG_01535":null,"SJAG_01593":null,"SJAG_01637":null,"SJAG_01679":null,"SJAG_01772":null,"SJAG_01854":null,"SJAG_01900":null,"SJAG_01992":null,"SJAG_02169":null,"SJAG_02299":null,"SJAG_02308":null,"SJAG_02319":null,"SJAG_02347":null,"SJAG_02371":null,"SJAG_02521":null,"SJAG_02575":null,"SJAG_02668":null,"SJAG_02685":null,"SJAG_02746":null,"SJAG_02851":null,"SJAG_02918":null,"SJAG_03005":null,"SJAG_03006":null,"SJAG_03112":null,"SJAG_03175":null,"SJAG_03191":null,"SJAG_03324":null,"SJAG_03387":null,"SJAG_03613":null,"SJAG_03615":null,"SJAG_03618":null,"SJAG_03657":null,"SJAG_03831":null,"SJAG_03860":null,"SJAG_03883":null,"SJAG_03968":null,"SJAG_03970":null,"SJAG_04151":null,"SJAG_04309":null,"SJAG_04429":null,"SJAG_04573":null,"SJAG_04600":null,"SJAG_04612":null,"SJAG_04619":null,"SJAG_04783":null,"SJAG_04857":null,"SJAG_04915":null,"SJAG_04966":null,"SJAG_04990":null,"SJAG_05022":null,"SJAG_05236":null,"SJAG_05264":null,"SJAG_05274":null,"SJAG_05323":null,"SJAG_05340":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0019787"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0140096","GO:0003674","GO:0003824","GO:0019787"],"is_obsolete":false,"name":"ubiquitin-protein transferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R03876","GO:0004840","Reactome:R-HSA-5693108","Reactome:R-HSA-9833155","Reactome:R-HSA-182993","Reactome:R-HSA-8956106","Reactome:R-HSA-1912386","Reactome:R-HSA-9793485","Reactome:R-HSA-9758604","Reactome:R-HSA-1358792","Reactome:R-HSA-5660753","Reactome:R-HSA-1980118","Reactome:R-HSA-936942","Reactome:R-HSA-182986","Reactome:R-HSA-9796387","Reactome:R-HSA-183051","Reactome:R-HSA-3000335","Reactome:R-HSA-1253282","Reactome:R-HSA-205118","Reactome:R-HSA-75824","Reactome:R-HSA-209063","Reactome:R-HSA-936986","Reactome:R-HSA-3780995","Reactome:R-HSA-2186747","Reactome:R-HSA-174104","Reactome:R-HSA-183089","Reactome:R-HSA-400267","Reactome:R-HSA-5607728","Reactome:R-HSA-174144","Reactome:R-HSA-1169406","Reactome:R-HSA-183084","Reactome:R-HSA-3134804","Reactome:R-HSA-983140","Reactome:R-HSA-2737728","Reactome:R-HSA-9701000","Reactome:R-HSA-9793444","Reactome:R-HSA-1977296","Reactome:R-HSA-1234163","Reactome:R-HSA-168915","Reactome:R-HSA-2187368","Reactome:R-HSA-446877","Reactome:R-HSA-202534","Reactome:R-HSA-180597","Reactome:R-HSA-2769007","Reactome:R-HSA-5668534","Reactome:R-HSA-5691108","Reactome:R-HSA-2186785","Reactome:R-HSA-9815507","Reactome:R-HSA-9013069","Reactome:R-HSA-2213017","Reactome:R-HSA-69598","Reactome:R-HSA-202453","Reactome:R-HSA-3134946","Reactome:R-HSA-983153","Reactome:R-HSA-5610745","Reactome:R-HSA-173542","Reactome:R-HSA-201425","Reactome:R-HSA-5357757","Reactome:R-HSA-5655170","Reactome:R-HSA-936412","Reactome:R-HSA-3788724","Reactome:R-HSA-174057","Reactome:R-HSA-5607756","Reactome:R-HSA-5667111","Reactome:R-HSA-975118","Reactome:R-HSA-1169402","Reactome:R-HSA-9833973","Reactome:R-HSA-9796626","Reactome:R-HSA-1169397","Reactome:R-HSA-1169395","Reactome:R-HSA-1169394","Reactome:R-HSA-179417","Reactome:R-HSA-1169405","Reactome:R-HSA-1912357","Reactome:R-HSA-5668454","Reactome:R-HSA-5483238","Reactome:R-HSA-211734","Reactome:R-HSA-3797226","Reactome:R-HSA-5675470","Reactome:R-HSA-68712","Reactome:R-HSA-9817362","Reactome:R-HSA-1852623","Reactome:R-HSA-1980074","Reactome:R-HSA-174195","Reactome:R-HSA-5607725","Reactome:R-HSA-9793679","Reactome:R-HSA-1918095","Reactome:R-HSA-264444","Reactome:R-HSA-180540","Reactome:R-HSA-741386","Reactome:R-HSA-174227","Reactome:R-HSA-4332236","Reactome:R-HSA-2169050","Reactome:R-HSA-2900765","Reactome:R-HSA-5684250","Reactome:R-HSA-187575","Reactome:R-HSA-1234172","Reactome:R-HSA-8948709","Reactome:R-HSA-983156","Reactome:R-HSA-5667107","Reactome:R-HSA-9645414","Reactome:R-HSA-9013974","GO:0004841","Reactome:R-HSA-5362412","Reactome:R-HSA-5652009","Reactome:R-HSA-1358789","Reactome:R-HSA-2730904","Reactome:R-HSA-174159","Reactome:R-HSA-1918092","Reactome:R-HSA-3249386","Reactome:R-HSA-5607757","Reactome:R-HSA-9750946","Reactome:R-HSA-9628444","Reactome:R-HSA-9861640","Reactome:R-HSA-9014342","Reactome:R-HSA-2179276","Reactome:R-HSA-2682349","Reactome:R-HSA-173545","Reactome:R-HSA-9645394","Reactome:R-HSA-1358790","Reactome:R-HSA-5610742","Reactome:R-HSA-9861563","Reactome:R-HSA-1169398","Reactome:R-HSA-870449","Reactome:R-HSA-1363331","Reactome:R-HSA-9796346","Reactome:R-HSA-975147","Reactome:R-HSA-5610746","Reactome:R-HSA-3781009","Reactome:R-HSA-2172172","Reactome:R-HSA-9834070","Reactome:R-HSA-9688831","Reactome:R-HSA-451418","Reactome:R-HSA-918224","Reactome:R-HSA-450358"],"synonyms":[{"name":"E2","type":"broad"},{"name":"E3","type":"broad"},{"name":"ubiquitin conjugating enzyme activity","type":"narrow"},{"name":"ubiquitin ligase activity","type":"narrow"},{"name":"ubiquitin protein ligase activity","type":"narrow"},{"name":"ubiquitin protein-ligase activity","type":"narrow"},{"name":"ubiquitin-conjugating enzyme activity","type":"narrow"}],"termid":"GO:0004842","terms_by_termid":{"GO:0004842":null,"GO:0034450":null,"GO:0061630":null,"GO:0061631":null,"GO:0140850":null,"GO:0140851":null}}


id: PBO:0046114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E binding protein 1 pseudogene 1","termid":"PBO:0046114"}


id: GO:0141126
data:
  {"annotated_genes":["SJAG_00944"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003860"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a short-chain fatty acyl-CoA + H2O = a short fatty acid + CoA + H+. A short-chain fatty acid has an aliphatic tail of less than 6 carbons.","definition_xrefs":["RHEA:68180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acyl-CoA hydrolase activity","termid":"GO:0047617"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00944":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"short-chain fatty acyl-CoA hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.2.18","MetaCyc:3.1.2.18-RXN"],"termid":"GO:0141126","terms_by_termid":{"GO:0003860":null}}


id: PBO:0073786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 6","termid":"PBO:0073786"}


id: GO:0000772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of binding to and activating specific cell surface receptors, thereby inducing a behavioral or physiological response(s) from a responding organism or cell that leads to the transfer or union of genetic material between organisms or cells. The mating pheromone can either be retained on the cell surface or secreted.","definition_xrefs":["GOC:clt","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pheromone activity","termid":"GO:0005186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005186"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0140677","GO:0005488","GO:0005515","GO:0003674","GO:0098772","GO:0005186"],"is_obsolete":false,"name":"mating pheromone activity","termid":"GO:0000772"}


id: GO:1905741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mitochondrial calcium release that is involved in positive regulation of presynaptic cytosolic calcium concentration.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060","PMID:26644474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"calcium export from the mitochondrion","termid":"GO:0099093"},{"relation_name":"part_of","term_name":"positive regulation of presynaptic cytosolic calcium concentration","termid":"GO:0099533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"calcium export from the mitochondrion involved in positive regulation of presynaptic cytosolic calcium concentration","synonyms":[{"name":"calcium ion transmembrane export from mitochondrion involved in positive regulation of presynaptic cytosolic calcium concentration","type":"exact"},{"name":"mitochondrial calcium release involved in positive regulation of presynaptic cytosolic calcium concentration","type":"exact"}],"termid":"GO:1905741"}


id: PBO:0002706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin depolymerizing factor, cofilin","termid":"PBO:0002706"}


id: PBO:0003688
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.4","termid":"PBO:0003688"}


id: PBO:0042781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 112","termid":"PBO:0042781"}


id: PBO:0060845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal growth regulator 1","termid":"PBO:0060845"}


id: FYPO:0001243
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to thiamine is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased RNA level during cellular response to thiamine","synonyms":[{"name":"increased RNA accumulation during cellular response to thiamine","type":"related"},{"name":"increased RNA level during cellular response to thiamine during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to thiamine during vegetative growth","type":"exact"},{"name":"increased RNA level during cellular response to vitamin B1","type":"exact"},{"name":"increased mRNA level during cellular response to thiamine","type":"narrow"},{"name":"increased transcript level during cellular response to thiamine","type":"exact"}],"termid":"FYPO:0001243"}


id: PBO:0087922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor that is activated by a MAPK signaling cascade; activates genes involved in mating or pseudohyphal/invasive growth pathways; cooperates with Tec1p transcription factor to regulate genes specific for invasive growth","termid":"PBO:0087922"}


id: GO:1902898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving fatty acid methyl ester.","definition_xrefs":["GO_REF:0000068","GOC:mengo_curators","PMID:16570218","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"fatty acid methyl ester metabolic process","synonyms":[{"name":"FAME metabolic process","type":"exact"},{"name":"fatty acid methyl ester metabolism","type":"exact"}],"termid":"GO:1902898"}


id: SO:00000040002382
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 5' UTR variant where the stop codon of an upstream open reading frame is lost.","definition_xrefs":["PMID:32926138","PMID:32461616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_uORF_stop_codon_variant","termid":"SO:00000010002382"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_uORF_stop_codon_loss_variant","synonyms":[{"name":"uSTOP_lost","type":"exact"}],"termid":"SO:00000040002382"}


id: GO:0008302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Recruitment and organization of actin filaments in female germline ring canals.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament organization","termid":"GO:0007015"},{"relation_name":"part_of","term_name":"female germline ring canal formation","termid":"GO:0007301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"female germline ring canal formation, actin assembly","synonyms":[{"name":"nurse cell ring canal formation, actin assembly","type":"narrow"},{"name":"ovarian ring canal formation, actin assembly","type":"narrow"},{"name":"ring canal formation, actin assembly","type":"broad"}],"termid":"GO:0008302"}


id: GO:0018075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The bromination of phenylalanine.","definition_xrefs":["RESID:AA0176","RESID:AA0174","RESID:AA0175"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-phenylalanine bromination (obsolete GO:0018075)","termid":"GO:0018075"}


id: PBO:0061771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odorant binding protein 2A","termid":"PBO:0061771"}


id: PBO:0016569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Siva family protein, human apoptosis-inducing factor ortholog (predicted)","termid":"PBO:0016569"}


id: GO:0102489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + 2 H2O = GMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete GTP phosphohydrolase activity (obsolete GO:0102489)","termid":"GO:0102489"}


id: GO:0022622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the root system over time, from its formation to the mature structure.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root system development","termid":"GO:0022622"}


id: PBO:0063391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCD6 divergent transcript","termid":"PBO:0063391"}


id: GO:0032683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of connective tissue growth factor production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of connective tissue growth factor production","termid":"GO:0032643"},{"relation_name":"negatively_regulates","term_name":"connective tissue growth factor production","termid":"GO:0032601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of connective tissue growth factor production","secondary_identifiers":["GO:0045421"],"synonyms":[{"name":"down regulation of connective tissue growth factor production","type":"exact"},{"name":"down-regulation of connective tissue growth factor production","type":"exact"},{"name":"downregulation of connective tissue growth factor production","type":"exact"},{"name":"inhibition of connective tissue growth factor production","type":"narrow"},{"name":"negative regulation of CCN2 production","type":"exact"},{"name":"negative regulation of CTGF production","type":"exact"},{"name":"negative regulation of Fisp12 production","type":"exact"},{"name":"negative regulation of Hcs24 production","type":"exact"},{"name":"negative regulation of IGFBP8 production","type":"exact"},{"name":"negative regulation of connective tissue growth factor biosynthetic process","type":"narrow"},{"name":"negative regulation of hypertrophic chondrocyte-specific gene product 24 production","type":"exact"}],"termid":"GO:0032683"}


id: PBO:0066814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 113","termid":"PBO:0066814"}


id: GO:2000833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of steroid hormone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"positive regulation of hormone secretion","termid":"GO:0046887"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of steroid hormone secretion","termid":"GO:2000831"},{"relation_name":"positively_regulates","term_name":"steroid hormone secretion","termid":"GO:0035929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"positive regulation of steroid hormone secretion","termid":"GO:2000833"}


id: PBO:0048844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosamine-6-phosphate deaminase 2","termid":"PBO:0048844"}


id: PBO:0088758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 associated protein Utp25","termid":"PBO:0088758"}


id: PBO:0056644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 15 pseudogene 5","termid":"PBO:0056644"}


id: PBO:0002022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin specific chaperone cofactor A, Alp31","termid":"PBO:0002022"}


id: FYPO:0002891
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of chromatin organization is normal (i.e. indistinguishable from wild type) in the vegetative growth phase of the life cycle. Chromatin organization results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.","definition_xrefs":["PomBase:mah","GO:0006325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin organization","termid":"FYPO:0007940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal chromatin organization during vegetative growth","synonyms":[{"name":"normal chromatin organisation during vegetative growth","type":"exact"},{"name":"normal chromatin organization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002891"}


id: PBO:0073301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 23","termid":"PBO:0073301"}


id: GO:0090100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090092"},{"relation_name":"positively_regulates","term_name":"cell surface receptor protein serine/threonine kinase signaling pathway","termid":"GO:0007178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","synonyms":[{"name":"positive regulation of transmembrane receptor protein serine/threonine kinase signalling pathway","type":"exact"}],"termid":"GO:0090100"}


id: PBO:0110874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ (Hsp40) chaperone family protein","termid":"PBO:0110874"}


id: PBO:0085115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar DEAD-box protein required for ribosome assembly and function; including synthesis of 60S ribosomal subunits; constituent of 66S pre-ribosomal particles","termid":"PBO:0085115"}


id: PBO:0004492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidate cytidylyltransferase (predicted)","termid":"PBO:0004492"}


id: GO:0008754
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: Lipid A-core + colanic acid = MLPS.","definition_xrefs":["MetaCyc:RXN0-5294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity","termid":"GO:0016874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"O antigen ligase activity","termid":"GO:0008754"}


id: PBO:0048047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follistatin like 5","termid":"PBO:0048047"}


id: MOD:01165
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an amino acid residue and 5'-phosphoadenosine through either a phosphodiester or a phosphoramide bond.","definition_xrefs":["Unimod:405","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide or nucleic acid modified residue","termid":"MOD:00701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylated residue","synonyms":[{"name":"5'phos Adenosinyl","type":"exact"},{"name":"AMP binding site","type":"related"},{"name":"Phosphoadenosine","type":"related"}],"termid":"MOD:01165"}


id: PBO:0044513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYYR1 antisense RNA 1","termid":"PBO:0044513"}


id: PBO:0045946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"embryonal Fyn-associated substrate","termid":"PBO:0045946"}


id: PBO:0113552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex alpha subunit, Ost1","termid":"PBO:0113552"}


id: GO:0070961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the directed killing of a symbiont target cell by a neutrophil.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to biotic stimulus","termid":"GO:0002833"},{"relation_name":"is_a","term_name":"positive regulation of defense response","termid":"GO:0031349"},{"relation_name":"is_a","term_name":"positive regulation of response to external stimulus","termid":"GO:0032103"},{"relation_name":"is_a","term_name":"positive regulation of killing of cells of another organism","termid":"GO:0051712"},{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of symbiont cell","termid":"GO:0070949"},{"relation_name":"is_a","term_name":"positive regulation of neutrophil mediated cytotoxicity","termid":"GO:0070960"},{"relation_name":"positively_regulates","term_name":"neutrophil-mediated killing of symbiont cell","termid":"GO:0070943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil mediated killing of symbiont cell","synonyms":[{"name":"activation of neutrophil mediated killing of symbiont cell","type":"narrow"},{"name":"stimulation of neutrophil mediated killing of symbiont cell","type":"narrow"},{"name":"up regulation of neutrophil mediated killing of symbiont cell","type":"exact"},{"name":"up-regulation of neutrophil mediated killing of symbiont cell","type":"exact"},{"name":"upregulation of neutrophil mediated killing of symbiont cell","type":"exact"}],"termid":"GO:0070961"}


id: GO:0014042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuron maturation.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron maturation","termid":"GO:0014041"},{"relation_name":"is_a","term_name":"positive regulation of cell maturation","termid":"GO:1903431"},{"relation_name":"positively_regulates","term_name":"neuron maturation","termid":"GO:0042551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neuron maturation","synonyms":[{"name":"activation of neuron maturation","type":"narrow"},{"name":"stimulation of neuron maturation","type":"narrow"},{"name":"up regulation of neuron maturation","type":"exact"},{"name":"up-regulation of neuron maturation","type":"exact"},{"name":"upregulation of neuron maturation","type":"exact"}],"termid":"GO:0014042"}


id: GO:0008848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete enterobactin synthetase (obsolete GO:0008848)","synonyms":[{"name":"enterobactin synthetase","type":"exact"},{"name":"enterochelin synthetase activity","type":"exact"},{"name":"nonribosomal peptide synthetase","type":"related"}],"termid":"GO:0008848"}


id: PBO:0074326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2","termid":"PBO:0074326"}


id: PBO:0049960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 6","termid":"PBO:0049960"}


id: PBO:0062151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily G member 1 pseudogene","termid":"PBO:0062151"}


id: GO:0002479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class I protein complex following intracellular transport via a TAP (transporter associated with antigen processing) pathway. The peptide is typically a fragment of a larger exogenous protein which has been degraded within the cell and is dependent on TAP transport from the cytosol to ER for association with the MHC class I molecule. Class I here refers to classical class I molecules.","definition_xrefs":["PMID:15771591","GOC:add","PMID:16181335","PMID:15224093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of exogenous peptide antigen via MHC class I","termid":"GO:0042590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent","synonyms":[{"name":"TAP-dependent antigen processing and presentation of exogenous peptide antigen via MHC class I","type":"exact"},{"name":"TAP-dependent exogenous peptide antigen processing and presentation via MHC class I","type":"exact"},{"name":"cross presentation","type":"broad"},{"name":"cross-presentation","type":"broad"},{"name":"exogenous peptide antigen processing and presentation via MHC class I, TAP-dependent","type":"exact"}],"termid":"GO:0002479"}


id: GO:0032880
data:
  {"annotated_genes":["SJAG_04509","SJAG_00883","SJAG_01373","SJAG_03591","SJAG_02592","SJAG_01805","SJAG_00906","SJAG_01311","SJAG_01825","SJAG_04597","SJAG_04343","SJAG_01084","SJAG_04312","SJAG_02074","SJAG_03970","SJAG_02392","SJAG_03602","SJAG_03453","SJAG_00823","SJAG_02645","SJAG_04464","SJAG_01716","SJAG_01245","SJAG_03048","SJAG_00030","SJAG_05978"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[87788,102304,102401,111408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905412"},{"annotations":[101857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[87015,91913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903067"},{"annotations":[90467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[103286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902543"},{"annotations":[110535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900181"},{"annotations":[91914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903077"},{"annotations":[103461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905406"},{"annotations":[70449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070863"},{"annotations":[96502,107070,97910,89863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[86904,90430,98448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"},{"annotations":[94495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"},{"annotations":[100703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903078"},{"annotations":[83970,88063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033157"},{"annotations":[104008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905391"},{"annotations":[99387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905634"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of any process in which a protein is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"regulates","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00823":null,"SJAG_00883":null,"SJAG_00906":null,"SJAG_01084":null,"SJAG_01245":null,"SJAG_01311":null,"SJAG_01373":null,"SJAG_01716":null,"SJAG_01805":null,"SJAG_01825":null,"SJAG_02074":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_02645":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_03591":null,"SJAG_03602":null,"SJAG_03970":null,"SJAG_04312":null,"SJAG_04343":null,"SJAG_04464":null,"SJAG_04509":null,"SJAG_04597":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1903827"],"synonyms":[{"name":"regulation of cellular protein localisation","type":"exact"},{"name":"regulation of cellular protein localization","type":"exact"},{"name":"regulation of protein localisation","type":"exact"}],"termid":"GO:0032880","terms_by_termid":{"GO:0033157":null,"GO:0042307":null,"GO:0042308":null,"GO:0042997":null,"GO:0046827":null,"GO:0070863":null,"GO:0120047":null,"GO:0140325":null,"GO:1900181":null,"GO:1902543":null,"GO:1903067":null,"GO:1903077":null,"GO:1903078":null,"GO:1905391":null,"GO:1905406":null,"GO:1905412":null,"GO:1905634":null}}


id: GO:0070642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving vitamin D5, (1S,3Z)-3-[(2E)-2-[(1R,3aS,7aR)-1-[(1R,4S)-4-ethyl-1,5-dimethylhexyl]-7a-methyl-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]-4-methylene-1-cyclohexanol.","definition_xrefs":["PubChem_Compound:9547700","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D metabolic process","termid":"GO:0042359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006766","GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"vitamin D5 metabolic process","synonyms":[{"name":"vitamin D5 metabolism","type":"exact"}],"termid":"GO:0070642"}


id: GO:0050748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving lipoproteins, any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"regulation of lipoprotein metabolic process","termid":"GO:0050746"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"negatively_regulates","term_name":"lipoprotein metabolic process","termid":"GO:0042157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lipoprotein metabolic process","synonyms":[{"name":"down regulation of lipoprotein metabolic process","type":"exact"},{"name":"down-regulation of lipoprotein metabolic process","type":"exact"},{"name":"downregulation of lipoprotein metabolic process","type":"exact"},{"name":"inhibition of lipoprotein metabolic process","type":"narrow"},{"name":"negative regulation of lipoprotein metabolism","type":"exact"}],"termid":"GO:0050748"}


id: PBO:0060469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide phosphoribosyltransferase","termid":"PBO:0060469"}


id: GO:0004458
data:
  {"annotated_genes":["SJAG_03804"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107832],"is_not":false,"summary":null,"term":"GO:0004458"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-lactate + 2 [Fe(III)cytochrome c] = 2 [Fe(II)cytochrome c] + 2 H+ + pyruvate.","definition_xrefs":["RHEA:13521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactate dehydrogenase activity","termid":"GO:0004457"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, cytochrome as acceptor","termid":"GO:0016898"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03804":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"D-lactate dehydrogenase (cytochrome) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.1.2.4","MetaCyc:D-LACTATE-DEHYDROGENASE-CYTOCHROME-RXN"],"synonyms":[{"name":"(R)-lactate:ferricytochrome-c 2-oxidoreductase activity","type":"exact"},{"name":"D-(-)-lactic cytochrome c reductase activity","type":"related"},{"name":"D-lactate (cytochrome) dehydrogenase activity","type":"related"},{"name":"D-lactate ferricytochrome c oxidoreductase activity","type":"related"},{"name":"D-lactate-cytochrome c reductase activity","type":"related"},{"name":"cytochrome-dependent D-(-)-lactate dehydrogenase activity","type":"related"},{"name":"lactic acid dehydrogenase activity","type":"broad"}],"termid":"GO:0004458","terms_by_termid":{"GO:0004458":null}}


id: PBO:0045542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrouridine synthase 2","termid":"PBO:0045542"}


id: GO:0180015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of nucleoside from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:21998139","PMID:30658162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"nucleoside transmembrane transport","termid":"GO:1901642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"nucleoside import across plasma membrane","termid":"GO:0180015"}


id: GO:0015790
data:
  {"annotated_genes":["SJAG_00434"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65800],"is_not":false,"summary":null,"term":"GO:0015790"}]},"cv_name":"biological_process","definition":"The directed movement of UDP-xylose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. UDP-xylose is a substance composed of xylose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transport","termid":"GO:0090481"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00434":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"UDP-xylose transmembrane transport","references_by_uniquename":{"GO_REF:0000108":null},"synonyms":[{"name":"UDP-xylose transport","type":"related"}],"termid":"GO:0015790","terms_by_termid":{"GO:0015790":null}}


id: PBO:0070685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 56","termid":"PBO:0070685"}


id: GO:0042795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of small nuclear RNA (snRNA) from a DNA template by RNA Polymerase II (Pol II), originating at a Pol II promoter.","definition_xrefs":["GOC:jl","ISBN:0321000382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription by RNA polymerase II","termid":"GO:0006366"},{"relation_name":"is_a","term_name":"snRNA transcription","termid":"GO:0009301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016073","GO:0006351"],"is_obsolete":false,"name":"snRNA transcription by RNA polymerase II","synonyms":[{"name":"snRNA transcription from Pol II promoter","type":"exact"},{"name":"snRNA transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0042795"}


id: GO:0090710
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-5-phosphomevalonate + ATP = ADP + CO2 + isopentenyl phosphate + phosphate.","definition_xrefs":["RHEA:40955","PMID:24375100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"phosphomevalonate decarboxylase activity","secondary_identifiers":["MetaCyc:RXN-10067","EC:4.1.1.99"],"termid":"GO:0090710"}


id: PBO:0030128
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_manganese_level","termid":"PBO:0030128"}


id: PBO:0045521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrobrevin beta","termid":"PBO:0045521"}


id: PBO:0053329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 160","termid":"PBO:0053329"}


id: PBO:0072858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha and TIR motif containing 1","termid":"PBO:0072858"}


id: PBO:0065297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRSS3 pseudogene 1","termid":"PBO:0065297"}


id: PBO:0063977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 11","termid":"PBO:0063977"}


id: PBO:0079044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 1-6","termid":"PBO:0079044"}


id: PBO:0082806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of U4/U6-U5 snRNP complex; involved in second catalytic step of splicing; participates in spliceosomal assembly through its interaction with U1 snRNA; largest and most evolutionarily conserved protein of the spliceosome; mutations in human ortholog, PRPF8, cause Retinitis pigmentosa and missplicing in Myelodysplastic syndrome; mouse ortholog interacts with androgen receptor and may have a role in prostate cancer","termid":"PBO:0082806"}


id: FYPO:0007712
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain any detectable mitochondria.","definition_xrefs":["PomBase:mah","PMID:33483504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"mitochondria absent from cell","synonyms":[{"name":"absent mitochondria","type":"exact"},{"name":"mitochondria absent from cell during mitotic cell cycle","type":"related"},{"name":"mitochondria absent from cell during vegetative growth","type":"exact"},{"name":"mitochondrion absent from cell","type":"exact"}],"termid":"FYPO:0007712"}


id: PBO:0081488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 384","termid":"PBO:0081488"}


id: PBO:0029197
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_serine_phosphorylation_during_mitotic_M_phase","termid":"PBO:0029197"}


id: PBO:0052013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JMJD1C antisense RNA 2","termid":"PBO:0052013"}


id: GO:0051003
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the ligation of two substances via a nitrogen-metal bond, forming a coordination complex.","definition_xrefs":["EC:6.6.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming nitrogen-metal bonds","termid":"GO:0051002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"ligase activity, forming nitrogen-metal bonds, forming coordination complexes","termid":"GO:0051003"}


id: SO:0001104
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Amino acid involved in the activity of an enzyme.","definition_xrefs":["UniProt:curation_manual","EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"},{"relation_name":"part_of","term_name":"polypeptide_catalytic_motif","termid":"SO:0100019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catalytic_residue","secondary_identifiers":["BS:00026"],"synonyms":[{"name":"act_site","type":"related"},{"name":"active site residue","type":"exact"},{"name":"catalytic residue","type":"exact"}],"termid":"SO:0001104"}


id: PBO:0002784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1716 family protein","termid":"PBO:0002784"}


id: PBO:0047515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FEV transcription factor, ETS family member","termid":"PBO:0047515"}


id: FYPO:0005766
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork pausing occurs to a greater extent than normal in regions where nucleosomes are depleted.","definition_xrefs":["PMID:27611590","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased replication fork pausing","termid":"FYPO:0005763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000293"],"is_obsolete":false,"name":"increased replication fork pausing at nucleosome-depleted regions","synonyms":[{"name":"increased replication fork pausing at nucleosome-depleted regions during mitotic cell cycle","type":"related"},{"name":"increased replication fork pausing at nucleosome-depleted regions during vegetative growth","type":"exact"}],"termid":"FYPO:0005766"}


id: GO:0099167
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic specialization membrane of a symmetric synapse consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of postsynaptic specialization membrane of symmetric synapse (obsolete GO:0099167)","termid":"GO:0099167"}


id: GO:0160032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein activation cascade that generates the active Toll receptor ligand and consists of the cascade of enzymatic reactions initiated by extracellular recognition factors, leading to the cleavage of the inactive form of spatzle family of ligands.","definition_xrefs":["PMID:23632253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein activation cascade","termid":"GO:0072376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"Toll receptor ligand protein activation cascade","termid":"GO:0160032"}


id: GO:0052602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-chloronitrobenzene + NADPH + H+ = 1-chloro-4-nitrosobenzene + NADP+ + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-chloronitrobenzene nitroreductase activity (obsolete GO:0052602)","termid":"GO:0052602"}


id: GO:1901984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein acetylation.","definition_xrefs":["GOC:TermGenie","PMID:22117195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of protein acetylation","termid":"GO:1901983"},{"relation_name":"negatively_regulates","term_name":"protein acetylation","termid":"GO:0006473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein acetylation","synonyms":[{"name":"down regulation of protein acetylation","type":"exact"},{"name":"down regulation of protein amino acid acetylation","type":"exact"},{"name":"down-regulation of protein acetylation","type":"exact"},{"name":"down-regulation of protein amino acid acetylation","type":"exact"},{"name":"downregulation of protein acetylation","type":"exact"},{"name":"downregulation of protein amino acid acetylation","type":"exact"},{"name":"inhibition of protein acetylation","type":"narrow"},{"name":"inhibition of protein amino acid acetylation","type":"narrow"},{"name":"negative regulation of protein amino acid acetylation","type":"exact"}],"termid":"GO:1901984"}


id: PBO:0043812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copine 3","termid":"PBO:0043812"}


id: GO:0103104
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-methylthiohexyldesulfoglucosinolate + 3'-phosphonato-5'-adenylyl sulfate = adenosine 3',5'-bismonophosphate + H+ + 6-methylthiohexylglucosinolate.","definition_xrefs":["GOC:pz","EC:2.8.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016782","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"6-methylthiohexyldesulfoglucosinolate sulfotransferase activity","secondary_identifiers":["MetaCyc:RXNQT-4331"],"termid":"GO:0103104"}


id: PBO:0063309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycomb group ring finger 3","termid":"PBO:0063309"}


id: PBO:0085434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polyamine transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; specific for spermine; localizes to the plasma membrane; transcription of TPO2 is regulated by Haa1p; TPO2 has a paralog, TPO3, that arose from the whole genome duplication","termid":"PBO:0085434"}


id: PBO:0083215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified ORF YTA7/YGR270W","termid":"PBO:0083215"}


id: PBO:0077817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 inducible nuclear protein 1","termid":"PBO:0077817"}


id: PBO:0074246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 66 member 2","termid":"PBO:0074246"}


id: GO:0018083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-cysteine or peptidyl-serine to peptidyl-L-3-oxoalanine; characteristic of the active sites of arylsulfatases.","definition_xrefs":["RESID:AA0185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"},{"relation_name":"is_a","term_name":"peptidyl-serine modification","termid":"GO:0018209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-L-3-oxoalanine biosynthetic process from peptidyl-cysteine or peptidyl-serine","synonyms":[{"name":"peptidyl-L-3-oxoalanine anabolism from peptidyl-cysteine or peptidyl-serine","type":"exact"},{"name":"peptidyl-L-3-oxoalanine formation from peptidyl-cysteine or peptidyl-serine","type":"exact"},{"name":"peptidyl-L-3-oxoalanine synthesis from peptidyl-cysteine or peptidyl-serine","type":"exact"}],"termid":"GO:0018083"}


id: PBO:0017444
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-produces","termid":"PBO:0017444"}


id: FYPO:0001266
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during cellular response to osmotic stress","termid":"FYPO:0002290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to salt stress","synonyms":[{"name":"normal protein phosphorylation during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0001266"}


id: PBO:0060659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natural cytotoxicity triggering receptor 3","termid":"PBO:0060659"}


id: PBO:0070295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 1","termid":"PBO:0070295"}


id: GO:0006103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving oxoglutarate, the dianion of 2-oxoglutaric acid. It is a key constituent of the TCA cycle and a key intermediate in amino-acid metabolism.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"2-oxoglutarate metabolic process","synonyms":[{"name":"2-ketoglutarate metabolic process","type":"exact"},{"name":"2-ketoglutarate metabolism","type":"exact"},{"name":"2-oxoglutarate metabolism","type":"exact"},{"name":"alpha-ketoglutarate metabolic process","type":"exact"},{"name":"alpha-ketoglutarate metabolism","type":"exact"},{"name":"alpha-oxoglutarate metabolic process","type":"exact"},{"name":"alpha-oxoglutarate metabolism","type":"exact"}],"termid":"GO:0006103"}


id: PBO:0088927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEMO1 family, human MEMO1 ortholog, ancient conserved protein, in some organisms this domain is present with ammecr1 which interacts with mediator complex and is implicated in transcription, implicated in signalling and localization to the plasma membrane","termid":"PBO:0088927"}


id: PBO:0087333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Specialized J-protein that functions in Fe-S cluster biogenesis; functions with Hsp70 in Fe-S cluster biogenesis in mitochondria; involved in iron metabolism; contains a J domain typical to J-type chaperones; localizes to the mitochondrial matrix","termid":"PBO:0087333"}


id: GO:1990019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a protein storage vacuole, a storage vacuole that contains a lytic vacuole.","definition_xrefs":["GOC:tb","PMID:21670741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole organization","termid":"GO:0007033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein storage vacuole organization","termid":"GO:1990019"}


id: GO:0001922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of B cells of the B-1 subset such that the total number of B-1 B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus. B-1 B cells are a distinct subset of B cells characterized as being CD5 positive, found predominantly in the peritoneum, pleural cavities, and spleen, and enriched for self-reactivity.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell homeostasis","termid":"GO:0001782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B-1 B cell homeostasis","synonyms":[{"name":"B-1 B lymphocyte homeostasis","type":"exact"},{"name":"B-1 B-cell homeostasis","type":"exact"},{"name":"B-1 B-lymphocyte homeostasis","type":"exact"}],"termid":"GO:0001922"}


id: FYPO:0003506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing copper ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002057","FYPO:0000003","FYPO:0002058","FYPO:0000257","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on copper","synonyms":[{"name":"normal cell population growth in presence of copper","type":"exact"},{"name":"normal cell population growth on copper","type":"exact"},{"name":"normal cell population growth on copper ion","type":"exact"},{"name":"normal cellular response to copper","type":"related"},{"name":"normal growth on copper ions","type":"exact"},{"name":"normal vegetative cell population growth on copper","type":"exact"}],"termid":"FYPO:0003506"}


id: PBO:0028365
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_septum_in_stationary_phase","termid":"PBO:0028365"}


id: GO:0048453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the sepal. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ formation","termid":"GO:0048449"},{"relation_name":"part_of","term_name":"sepal morphogenesis","termid":"GO:0048447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sepal formation","secondary_identifiers":["GO:0048423"],"termid":"GO:0048453"}


id: PBO:0071376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30","termid":"PBO:0071376"}


id: GO:1903597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gap junction assembly.","definition_xrefs":["GO_REF:0000058","GOC:mtg_cardiac_conduct_nov11","GOC:rl","GOC:TermGenie","PMID:25017399","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell junction assembly","termid":"GO:1901889"},{"relation_name":"is_a","term_name":"regulation of gap junction assembly","termid":"GO:1903596"},{"relation_name":"negatively_regulates","term_name":"gap junction assembly","termid":"GO:0016264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gap junction assembly","synonyms":[{"name":"down regulation of gap junction assembly","type":"exact"},{"name":"down-regulation of gap junction assembly","type":"exact"},{"name":"downregulation of gap junction assembly","type":"exact"},{"name":"inhibition of gap junction assembly","type":"narrow"}],"termid":"GO:1903597"}


id: GO:0098862
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell part consisting of multiple, closely packed actin-based cell projections.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cluster of actin-based cell projections","termid":"GO:0098862"}


id: PBO:0078192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 5-2 (pseudogene)","termid":"PBO:0078192"}


id: PBO:0090699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex-associated motor subunit Pam17","termid":"PBO:0090699"}


id: GO:0141127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters a Rab protein family-mediated signal transduction pathway in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:30181274","PMID:24251537","PMID:30893609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host small GTPase-mediated signal transduction","termid":"GO:0044082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host Rab small GTPase signal transduction","synonyms":[{"name":"modulation by symbiont of host Rab protein mediated signal transduction","type":"exact"},{"name":"modulation by symbiont of host Rab protein signal transduction","type":"exact"},{"name":"modulation by symbiont of host Rab protein-mediated signal transduction","type":"exact"},{"name":"modulation of host Rab protein signal transduction by symbiont","type":"exact"},{"name":"modulation of host Rab protein signaling by symbiont","type":"exact"},{"name":"modulation of host Rab protein signalling by symbiont","type":"exact"},{"name":"perturbation of host Rab protein signal transduction","type":"exact"},{"name":"symbiont-mediated perturbation of host Rab protein signal transduction","type":"exact"}],"termid":"GO:0141127"}


id: GO:0031586
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of the inositol 1,4,5-trisphosphate-sensitive calcium-release channel.","definition_xrefs":["GOC:dph","GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity","termid":"GO:0031585"},{"relation_name":"is_a","term_name":"negative regulation of calcium-mediated signaling","termid":"GO:0050849"},{"relation_name":"is_a","term_name":"negative regulation of release of sequestered calcium ion into cytosol","termid":"GO:0051280"},{"relation_name":"is_a","term_name":"negative regulation of calcium ion transmembrane transporter activity","termid":"GO:1901020"},{"relation_name":"is_a","term_name":"negative regulation of cation channel activity","termid":"GO:2001258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity","synonyms":[{"name":"down regulation of IP3 receptor activity","type":"exact"},{"name":"down-regulation of IP3 receptor activity","type":"exact"},{"name":"downregulation of IP3 receptor activity","type":"exact"},{"name":"inhibition of IP3 receptor activity","type":"narrow"},{"name":"negative regulation of IP3 receptor activity","type":"related"},{"name":"negative regulation of inositol 1,4,5-trisphosphate receptor activity","type":"exact"}],"termid":"GO:0031586"}


id: PBO:0005562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gtr1/RagA G protein Gtr2 (predicted)","termid":"PBO:0005562"}


id: PBO:0089561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin 1 (Sam37)","termid":"PBO:0089561"}


id: GO:0035903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of being rendered immobile.","definition_xrefs":["PMID:17683801","GOC:bf","PMID:19893991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"response to immobilization stress","termid":"GO:0035902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to immobilization stress","synonyms":[{"name":"cellular response to immobilisation stress","type":"exact"},{"name":"cellular response to restraint stress","type":"related"}],"termid":"GO:0035903"}


id: PBO:0000188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc20/Fizzy subfamily WD repeat protein","termid":"PBO:0000188"}


id: PBO:0054480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1880","termid":"PBO:0054480"}


id: PBO:0069897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1188, pseudogene","termid":"PBO:0069897"}


id: PBO:0077455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM183A pseudogene 5","termid":"PBO:0077455"}


id: PBO:0056288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MANEAL pseudogene 1","termid":"PBO:0056288"}


id: GO:0022022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of septal cells, resulting in the expansion of a cell population.","definition_xrefs":["GOC:jid","GOC:cls","GOC:dph","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subpallium cell proliferation in forebrain","termid":"GO:0022012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"septal cell proliferation","synonyms":[{"name":"septum cell proliferation","type":"exact"}],"termid":"GO:0022022"}


id: PBO:0058439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5003","termid":"PBO:0058439"}


id: PBO:0048968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPALPP motifs containing 1","termid":"PBO:0048968"}


id: FYPO:0004600
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A conjugation phenotype in which regulation of transcription in response to mating pheromone is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal transcriptional response to pheromone","synonyms":[{"name":"normal regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"}],"termid":"FYPO:0004600"}


id: PBO:0084269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein; localized to late Golgi vesicles along with the v-SNARE Tlg2p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern","termid":"PBO:0084269"}


id: GO:0006896
data:
  {"annotated_genes":["SJAG_03756","SJAG_00108","SJAG_04902","SJAG_02453","SJAG_03137","SJAG_01324","SJAG_03963","SJAG_03726","SJAG_01645","SJAG_00916","SJAG_01488","SJAG_02811","SJAG_03072","SJAG_03848","SJAG_04931","SJAG_02912","SJAG_02240","SJAG_04023","SJAG_03347","SJAG_01809","SJAG_02587"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84970,86632,88332,90247,91846,92193,92944,93213,95570,95971,97506,100129,103424,104737,104850,105228,105855,106319,107560,113621,114950],"is_not":false,"summary":null,"term":"GO:0006896"}]},"cv_name":"biological_process","definition":"The directed movement of substances from the Golgi to the vacuole.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-Golgi vesicle-mediated transport","termid":"GO:0006892"},{"relation_name":"is_a","term_name":"vacuolar transport","termid":"GO:0007034"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_00916":null,"SJAG_01324":null,"SJAG_01488":null,"SJAG_01645":null,"SJAG_01809":null,"SJAG_02240":null,"SJAG_02453":null,"SJAG_02587":null,"SJAG_02811":null,"SJAG_02912":null,"SJAG_03072":null,"SJAG_03137":null,"SJAG_03347":null,"SJAG_03726":null,"SJAG_03756":null,"SJAG_03848":null,"SJAG_03963":null,"SJAG_04023":null,"SJAG_04902":null,"SJAG_04931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"Golgi to vacuole transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Golgi to vacuole vesicle-mediated transport","type":"exact"}],"termid":"GO:0006896","terms_by_termid":{"GO:0006896":null}}


id: PBO:0068288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease K","termid":"PBO:0068288"}


id: PBO:0005570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Prp4","termid":"PBO:0005570"}


id: GO:0007352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the dorsal/ventral axis of the embryo, through the products of genes expressed in the zygote.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic axis specification","termid":"GO:0000578"},{"relation_name":"is_a","term_name":"dorsal/ventral axis specification","termid":"GO:0009950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"zygotic specification of dorsal/ventral axis","synonyms":[{"name":"zygotic determination of dorsal-ventral axis","type":"related"},{"name":"zygotic determination of dorsal/ventral axis","type":"related"},{"name":"zygotic determination of dorsoventral axis","type":"related"}],"termid":"GO:0007352"}


id: PR:P25009
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- puc1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P25009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin puc1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F5.01c","synonyms":[{"name":"Spom972h-puc1","type":"exact"}],"termid":"PR:P25009"}


id: PBO:0068198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 505","termid":"PBO:0068198"}


id: FYPO:0001183
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an alpha-glucosidase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abnormal alpha-glucosidase activity","termid":"FYPO:0001183"}


id: PBO:0040526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"azurocidin 1","termid":"PBO:0040526"}


id: PBO:0049531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.Z histone pseudogene 2","termid":"PBO:0049531"}


id: PBO:0031830
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_localization","termid":"PBO:0031830"}


id: GO:1903944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of hepatocyte apoptotic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:8649852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hepatocyte apoptotic process","termid":"GO:1903943"},{"relation_name":"is_a","term_name":"negative regulation of epithelial cell apoptotic process","termid":"GO:1904036"},{"relation_name":"negatively_regulates","term_name":"hepatocyte apoptotic process","termid":"GO:0097284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hepatocyte apoptotic process","synonyms":[{"name":"down regulation of hepatocyte apoptosis","type":"narrow"},{"name":"down regulation of hepatocyte apoptotic process","type":"exact"},{"name":"down-regulation of hepatocyte apoptosis","type":"narrow"},{"name":"down-regulation of hepatocyte apoptotic process","type":"exact"},{"name":"downregulation of hepatocyte apoptosis","type":"narrow"},{"name":"downregulation of hepatocyte apoptotic process","type":"exact"},{"name":"inhibition of hepatocyte apoptosis","type":"narrow"},{"name":"inhibition of hepatocyte apoptotic process","type":"narrow"},{"name":"negative regulation of hepatocyte apoptosis","type":"narrow"}],"termid":"GO:1903944"}


id: PBO:0071767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P2","termid":"PBO:0071767"}


id: PR:O74943
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C553.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.06","synonyms":[{"name":"Spom972h-swp1","type":"exact"}],"termid":"PR:O74943"}


id: PBO:0053723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 937","termid":"PBO:0053723"}


id: PR:O13745
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tfb1 gene.","definition_xrefs":["UniProtKB:O13745","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II transcription factor B subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.11c","synonyms":[{"name":"RNA polymerase II transcription factor B 73 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II transcription factor B p73 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tfb1","type":"exact"}],"termid":"PR:O13745"}


id: GO:0042909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of acridine (10-azaanthracene), a heterocyclic ring compound found in crude coal-tar anthracene, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","Wikipedia:Acridine"],"gene_count":0,"genotype_count":0,"name":"obsolete acridine transport (obsolete GO:0042909)","termid":"GO:0042909"}


id: GO:0043781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + cobalt-factor II = S-adenosyl-L-homocysteine + cobalt-factor III.","definition_xrefs":["EC:2.1.1.151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"cobalt-factor II C20-methyltransferase activity","secondary_identifiers":["RHEA:17997","MetaCyc:RXN-8760"],"synonyms":[{"name":"CbiL","type":"narrow"},{"name":"S-adenosyl-L-methionine:cobalt-factor-II C20-methyltransferase activity","type":"related"},{"name":"cobalt-factor II C20 methyltransferase activity","type":"exact"},{"name":"cobalt-precorrin-2 C(20)-methyltransferase activity","type":"related"}],"termid":"GO:0043781"}


id: GO:0021833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The interaction of a cell and the extracellular matrix involved in the directed tangential movement of cells mediated by cell-cell interactions in the developing cerebral cortex.","definition_xrefs":["GOC:dph","GOC:tb","GO_REF:0000021","PMID:12626695","GOC:cls","GOC:ascb_2009","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate adhesion","termid":"GO:0031589"},{"relation_name":"part_of","term_name":"cerebral cortex tangential migration using cell-cell interactions","termid":"GO:0021823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell-matrix adhesion involved in tangential migration using cell-cell interactions","termid":"GO:0021833"}


id: PBO:0067500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 636, pseudogene","termid":"PBO:0067500"}


id: PBO:0059090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORC2 antisense RNA 1","termid":"PBO:0059090"}


id: PBO:0065991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid induced 1","termid":"PBO:0065991"}


id: PBO:0075604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2","termid":"PBO:0075604"}


id: GO:0140777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A molecular function that involves direct binding to one of the subunits of a protein-containing complex, thus preventing an interaction with a factor that would promote dissociation of the complex.","definition_xrefs":["PMID:34040253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"protein-containing complex stabilizing activity","termid":"GO:0140777"}


id: PBO:0001524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scaffold protein Scd2","termid":"PBO:0001524"}


id: PBO:0016547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1-5,6,7,8-tetrahydrofolate (THF) synthase, trifunctional enzyme Thf1","termid":"PBO:0016547"}


id: PBO:0075855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family member 4","termid":"PBO:0075855"}


id: PR:Q10140
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3H8.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3H8.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H8.04","synonyms":[{"name":"Spom972h-SPAC3H8.04","type":"exact"}],"termid":"PR:Q10140"}


id: PBO:0085395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane P2-type H+-ATPase; pumps protons out of cell; major regulator of cytoplasmic pH and plasma membrane potential; long-lived hexameric protein asymmetrically distributed at plasma membrane between mother cells and buds; accumulates at high levels in mother cells during aging, buds emerge with very low levels of Pma1p, newborn cells have low levels of Pma1p; Hsp30p plays a role in Pma1p regulation; interactions with Std1p appear to propagate [GAR+]","termid":"PBO:0085395"}


id: GO:0090024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate, or extent of neutrophil chemotaxis. Neutrophil chemotaxis is the directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of granulocyte chemotaxis","termid":"GO:0071623"},{"relation_name":"is_a","term_name":"regulation of neutrophil chemotaxis","termid":"GO:0090022"},{"relation_name":"is_a","term_name":"negative regulation of neutrophil migration","termid":"GO:1902623"},{"relation_name":"negatively_regulates","term_name":"neutrophil chemotaxis","termid":"GO:0030593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil chemotaxis","termid":"GO:0090024"}


id: PBO:0081975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 2","termid":"PBO:0081975"}


id: PBO:0049109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 166 pseudogene","termid":"PBO:0049109"}


id: PBO:0030975
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_methylation","termid":"PBO:0030975"}


id: PBO:0034345
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_out-paralogy_relationship_with","termid":"PBO:0034345"}


id: PBO:0047164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 192 member B, pseudogene","termid":"PBO:0047164"}


id: PR:O13692
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gas5 gene.","definition_xrefs":["UniProtKB:O13692","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucanosyltransferase gas5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.13c","synonyms":[{"name":"Spom972h-gas5","type":"exact"}],"termid":"PR:O13692"}


id: PBO:0087771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of U3-containing 90S preribosome and SSU processome complexes; involved in production of 18S rRNA and assembly of small ribosomal subunit; synthetic defect with STI1 Hsp90 cochaperone; human homolog linked to glaucoma; Small Subunit processome is also known as SSU processome","termid":"PBO:0087771"}


id: GO:0110136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss, or modification of macromolecules within a protein-RNA complex, resulting in the alteration of an existing complex.","definition_xrefs":["PMID:19737519","PMID:20542003","PMID:24240281","GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex remodeling","termid":"GO:0034367"},{"relation_name":"is_a","term_name":"protein-RNA complex organization","termid":"GO:0071826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-RNA complex remodeling","synonyms":[{"name":"protein-RNA complex remodelling","type":"exact"}],"termid":"GO:0110136"}


id: PBO:0075204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 16","termid":"PBO:0075204"}


id: GO:0033519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytyl diphosphate, (2E)-3,7,11,15-tetramethylhexadec-2-en-1-yl trihydrogen diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phytyl diphosphate metabolic process","synonyms":[{"name":"phytyl diphosphate metabolism","type":"exact"}],"termid":"GO:0033519"}


id: FYPO:0007161
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to stress during vegetative growth","termid":"FYPO:0000850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"resistance to oxidative stress","synonyms":[{"name":"increased growth during cellular response to oxidative stress","type":"exact"},{"name":"increased vegetative cell population growth during cellular response to oxidative stress","type":"exact"},{"name":"resistance to oxidative stress during mitotic cell cycle","type":"related"},{"name":"resistance to oxidative stress during vegetative growth","type":"exact"},{"name":"resistant to oxidative stress","type":"exact"}],"termid":"FYPO:0007161"}


id: PBO:0087457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a Golgi membrane exchange factor (Ric1p-Rgp1p); this complex catalyzes nucleotide exchange on Ypt6p","termid":"PBO:0087457"}


id: GO:0035002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The clearance of liquid from the epithelial tubes of an open tracheal system, shortly before the emergence of the larva, to generate an air-filled tubule system.","definition_xrefs":["PMID:12571352","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial fluid transport","termid":"GO:0042045"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"liquid clearance, open tracheal system","synonyms":[{"name":"tracheal liquid clearance","type":"exact"}],"termid":"GO:0035002"}


id: PBO:0064115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 1, transient receptor potential channel interacting pseudogene 2","termid":"PBO:0064115"}


id: PBO:0043488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary neurotrophic factor","termid":"PBO:0043488"}


id: PBO:0085502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein co-chaperone with a zinc finger motif; essential for protein import into mitochondria; may act with Pam18p to facilitate recognition and folding of imported proteins by Ssc1p (mtHSP70) in the mitochondrial matrix; required for the maintenance of Ssc1p solubility and assists in the functional interaction of Ssc1p with substrate proteins","termid":"PBO:0085502"}


id: PBO:0058575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6512","termid":"PBO:0058575"}


id: PBO:0060431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nascent polypeptide associated complex subunit alpha 2","termid":"PBO:0060431"}


id: PBO:0012301
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae SRV2","termid":"PBO:0012301"}


id: PBO:0059095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mortality factor 4 like 1 pseudogene 1","termid":"PBO:0059095"}


id: PBO:0002613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cofactor for methionyl-and glutamyl-tRNA synthetases (predicted)","termid":"PBO:0002613"}


id: GO:0009201
data:
  {"annotated_genes":["SJAG_04122","SJAG_00438","SJAG_01471","SJAG_00542","SJAG_00915","SJAG_MIT37","SJAG_00836","SJAG_00985","SJAG_04422","SJAG_03114","SJAG_05204","SJAG_00533","SJAG_02598","SJAG_07003","SJAG_04849","SJAG_05024","SJAG_02105","SJAG_MIT15","SJAG_03925","SJAG_00133","SJAG_02887","SJAG_01298","SJAG_02564","SJAG_MIT09","SJAG_03708"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[96132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[89017,110980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[98301,96133,104326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[66562],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015986"},{"annotations":[88903,103955,90898,115131,89926,85193,115125,104841,99100,99748,103865,111915,101051,97876,115136,99719,89331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[114071],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905706"},{"annotations":[96134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a ribonucleoside triphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate biosynthetic process","termid":"GO:0009142"},{"relation_name":"is_a","term_name":"ribonucleoside triphosphate metabolic process","termid":"GO:0009199"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00533":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01298":null,"SJAG_01471":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02887":null,"SJAG_03114":null,"SJAG_03708":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_04422":null,"SJAG_04849":null,"SJAG_05024":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"ribonucleoside triphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"ribonucleoside triphosphate anabolism","type":"exact"},{"name":"ribonucleoside triphosphate biosynthesis","type":"exact"},{"name":"ribonucleoside triphosphate formation","type":"exact"},{"name":"ribonucleoside triphosphate synthesis","type":"exact"}],"termid":"GO:0009201","terms_by_termid":{"GO:0006183":null,"GO:0006228":null,"GO:0006241":null,"GO:0015986":null,"GO:0042776":null,"GO:0044210":null,"GO:0044211":null,"GO:1905706":null}}


id: PBO:0050364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 67","termid":"PBO:0050364"}


id: FYPO:0005862
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which MTREC complex binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:26942678","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000702"],"is_obsolete":false,"name":"abolished MTREC complex binding","synonyms":[{"name":"MTREC complex binding abolished","type":"exact"},{"name":"abolished NURS complex binding","type":"exact"}],"termid":"FYPO:0005862"}


id: PATO:0001869
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being abnormal and having a destructive effect on living tissue.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal","termid":"PATO:0000460"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pathological","termid":"PATO:0001869"}


id: GO:1902822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of late endosome to lysosome transport.","definition_xrefs":["GOC:pad","GOC:PARL","GOC:TermGenie","GO_REF:0000058","PMID:23949442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vacuolar transport","termid":"GO:1903335"},{"relation_name":"regulates","term_name":"late endosome to lysosome transport","termid":"GO:1902774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of late endosome to lysosome transport","synonyms":[{"name":"regulation of prevacuolar compartment to lysosome transport","type":"broad"}],"termid":"GO:1902822"}


id: GO:0043991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2B by the addition of an phosphate group to a serine residue at position 14 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2B-S14 phosphorylation (obsolete GO:0043991)","synonyms":[{"name":"histone H2B phosphorylation at S14","type":"exact"},{"name":"histone H2BS14 phosphorylation","type":"exact"}],"termid":"GO:0043991"}


id: GO:0034866
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4,4-trimethylpentanoyl-CoA = 2,4,4-trimethylpent-2-enoyl-CoA + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4,4-trimethylpentanoyl-CoA dehydrogenase activity (obsolete GO:0034866)","termid":"GO:0034866"}


id: GO:0002266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a follicular dendritic cell resulting from exposure to an activating factor such as a cellular or soluble ligand.","definition_xrefs":["PMID:15606789","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"follicular dendritic cell activation","termid":"GO:0002266"}


id: GO:0006684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine, any of a class of phospholipids in which the amino group of sphingosine is in amide linkage with one of several fatty acids, while the terminal hydroxyl group of sphingosine is esterified to phosphorylcholine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"sphingolipid metabolic process","termid":"GO:0006665"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sphingomyelin metabolic process","synonyms":[{"name":"sphingomyelin metabolism","type":"exact"}],"termid":"GO:0006684"}


id: GO:0042391
data:
  {"annotated_genes":["SJAG_01541","SJAG_02883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85578,92804],"is_not":false,"summary":null,"term":"GO:0042391"}]},"cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.","definition_xrefs":["GOC:tb","GOC:mtg_cardio","ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01541":null,"SJAG_02883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of membrane potential","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0042391","terms_by_termid":{"GO:0042391":null}}


id: PBO:0038711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 6","termid":"PBO:0038711"}


id: PBO:0003128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase binding protein Sbp1","termid":"PBO:0003128"}


id: PBO:0046897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM20C golgi associated secretory pathway kinase","termid":"PBO:0046897"}


id: PBO:0047747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 11","termid":"PBO:0047747"}


id: GO:0141047
data:
  {"annotated_genes":["SJAG_01365","SJAG_02891","SJAG_00615","SJAG_03971","SJAG_02253","SJAG_03849","SJAG_06309","SJAG_03616","SJAG_01226","SJAG_03843","SJAG_00452"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[87092,84179,113274,94705,84178,94704,95862,98936,87091,87093,84177,105607,104731,86148,105291,95861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031386"}]},"cv_name":"molecular_function","definition":"A molecular function exhibited by a protein that is covalently attached (AKA tagged or conjugated) to another molecule (for example a protein or a lipid) where it acts as a marker, recognized by the cellular apparatus to target the tagged protein for some cellular process such as modification, sequestration, transport or degradation.","definition_xrefs":["PMID:17632063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00452":null,"SJAG_00615":null,"SJAG_01226":null,"SJAG_01365":null,"SJAG_02253":null,"SJAG_02891":null,"SJAG_03616":null,"SJAG_03843":null,"SJAG_03849":null,"SJAG_03971":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"molecular tag activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"covalent modifier","type":"broad"},{"name":"tag","type":"exact"}],"termid":"GO:0141047","terms_by_termid":{"GO:0031386":null}}


id: GO:0120075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endocardial cushion cell differentiation.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocardial cushion cell differentiation","termid":"GO:0120074"},{"relation_name":"is_a","term_name":"positive regulation of cardiocyte differentiation","termid":"GO:1905209"},{"relation_name":"positively_regulates","term_name":"endocardial cushion cell differentiation","termid":"GO:0061443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endocardial cushion cell differentiation","termid":"GO:0120075"}


id: FYPO:0001798
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of translation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"abnormal translation","termid":"FYPO:0001797"},{"relation_name":"is_a","term_name":"decreased gene expression","termid":"FYPO:0006549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased translation","synonyms":[{"name":"decreased protein biosynthesis","type":"exact"},{"name":"decreased protein synthesis","type":"exact"},{"name":"decreased rate of protein synthesis","type":"narrow"},{"name":"decreased translation during mitotic cell cycle","type":"related"},{"name":"decreased translation during vegetative growth","type":"exact"},{"name":"reduced translation","type":"exact"}],"termid":"FYPO:0001798"}


id: FYPO:0004675
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing dimethyl sulfoxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057","FYPO:0000257","FYPO:0000139","FYPO:0002058","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on dimethyl sulfoxide","synonyms":[{"name":"normal cell population growth in presence of dimethyl sulfoxide","type":"exact"},{"name":"normal cell population growth on DMSO","type":"exact"},{"name":"normal cell population growth on dimethyl sulfoxide","type":"exact"},{"name":"normal cellular response to dimethyl sulfoxide","type":"related"},{"name":"normal growth on dimethyl sulphoxide","type":"exact"},{"name":"normal vegetative cell population growth on dimethyl sulfoxide","type":"exact"}],"termid":"FYPO:0004675"}


id: PBO:0113401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative SPOUT methyltransferase; predicted to be involved in ribosome biogenesis; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; not an essential gene; YMR310C has a paralog, YGR283C, that arose from the whole genome duplication","termid":"PBO:0113401"}


id: PR:000027591
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.2, initiator methionine removed phosphorylated 1 in Schizosaccharomyces pombe. Phosphorylated by Haspin. Example: UniProtKB:P09988-1, 2-136, Thr-4, MOD:00047.","definition_xrefs":["PMID:20929775","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht2/Phos(T3)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"H3-pT3","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.2, initiator methionine removed phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht2/InitMet-/Phos:1","type":"exact"},{"name":"hht2/InitMet-/Phos:(T4)","type":"exact"},{"name":"hht2/Phos(T3)","type":"exact"}],"termid":"PR:000027591"}


id: GO:0031267
data:
  {"annotated_genes":["SJAG_00279","SJAG_02661","SJAG_03959","SJAG_00968","SJAG_03229","SJAG_00525","SJAG_01943","SJAG_03002","SJAG_03662","SJAG_03470","SJAG_03693","SJAG_04703","SJAG_02012","SJAG_01789","SJAG_00864","SJAG_03085","SJAG_02833","SJAG_01909","SJAG_01358","SJAG_04733","SJAG_04400","SJAG_02998","SJAG_04366"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57069,58501,58734,59970,60768,60850,60992,62455,63207,63846,64052,64088,65781,66661,67937,68048,70310,70923,72468,72901,73939,76294,77037],"is_not":false,"summary":null,"term":"GO:0031267"}]},"cv_name":"molecular_function","definition":"Binding to a small monomeric GTPase.","definition_xrefs":["PMID:27218782","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTPase binding","termid":"GO:0051020"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00525":null,"SJAG_00864":null,"SJAG_00968":null,"SJAG_01358":null,"SJAG_01789":null,"SJAG_01909":null,"SJAG_01943":null,"SJAG_02012":null,"SJAG_02661":null,"SJAG_02833":null,"SJAG_02998":null,"SJAG_03002":null,"SJAG_03085":null,"SJAG_03229":null,"SJAG_03470":null,"SJAG_03662":null,"SJAG_03693":null,"SJAG_03959":null,"SJAG_04366":null,"SJAG_04400":null,"SJAG_04703":null,"SJAG_04733":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"small GTPase binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["GO:0017049","GO:0030306","GO:0005084","GO:0017031","GO:0017048","GO:0017016","GO:0017137","GO:0017160","GO:0048365","GO:0008536","GO:0034989"],"synonyms":[{"name":"ADP-ribosylation factor binding","type":"narrow"},{"name":"ARF binding","type":"narrow"},{"name":"GTP-Ral binding","type":"narrow"},{"name":"GTP-Rho binding","type":"narrow"},{"name":"REP","type":"narrow"},{"name":"Rab GTPase binding","type":"narrow"},{"name":"Rab escort protein activity","type":"narrow"},{"name":"Rab interactor activity","type":"narrow"},{"name":"Rac GTPase binding","type":"narrow"},{"name":"Ral GTPase binding","type":"narrow"},{"name":"Ran GTPase binding","type":"narrow"},{"name":"Ran protein binding","type":"narrow"},{"name":"Ran-binding protein","type":"narrow"},{"name":"Ras GTPase binding","type":"narrow"},{"name":"Ras interactor activity","type":"narrow"},{"name":"Rho GTPase binding","type":"narrow"}],"termid":"GO:0031267","terms_by_termid":{"GO:0031267":null}}


id: GO:0039522
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal movement of mRNA from the nucleus to the cytoplasm of the host cell, leading to shutoff of host protein expression. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:bf","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host gene expression","termid":"GO:0039657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host mRNA export from nucleus","secondary_identifiers":["VZ:902"],"synonyms":[{"name":"inhibition by virus of host mRNA nuclear export","type":"narrow"},{"name":"inhibition of host mRNA nuclear export by virus","type":"narrow"},{"name":"negative regulation by virus of host mRNA nuclear export","type":"broad"},{"name":"suppression by virus of host mRNA export from nucleus","type":"narrow"},{"name":"suppression of host mRNA nuclear export by virus","type":"narrow"}],"termid":"GO:0039522"}


id: PBO:0052277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 5D","termid":"PBO:0052277"}


id: PBO:0055686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoyltransferase 1 pseudogene 1","termid":"PBO:0055686"}


id: PBO:0003775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing associated factor Saf4 (predicted)","termid":"PBO:0003775"}


id: PBO:0045227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C15","termid":"PBO:0045227"}


id: GO:1901805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-glucoside.","definition_xrefs":["PMID:15205427","PMID:16390337","PMID:8990303","GOC:yaf","Unipathway:UPA00237","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside catabolic process","termid":"GO:0016139"},{"relation_name":"is_a","term_name":"beta-glucoside metabolic process","termid":"GO:1901804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"beta-glucoside catabolic process","synonyms":[{"name":"beta-glucoside breakdown","type":"exact"},{"name":"beta-glucoside catabolism","type":"exact"},{"name":"beta-glucoside degradation","type":"exact"}],"termid":"GO:1901805"}


id: FYPO:0003474
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which nucleus is broken into multiple small fragments that are smaller than a normal nucleus, hen the cell is subject to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragmented nucleus during vegetative growth","termid":"FYPO:0001919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002403","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"fragmented nucleus during cellular response to salt stress","synonyms":[{"name":"fragmented nuclear DNA during cellular response to salt stress","type":"related"},{"name":"fragmented nucleus during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"fragmented nucleus during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"loss of nuclear integrity during cellular response to salt stress","type":"related"}],"termid":"FYPO:0003474"}


id: PBO:0074493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNAI3 antisense RNA 1","termid":"PBO:0074493"}


id: FYPO:0009019
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which the poportion of cells with two nuclei is higher than normal.","definition_xrefs":["PMID:34984977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003"],"is_obsolete":false,"name":"increased vegetative cell population binucleate index","synonyms":[{"name":"higher proportion of binucleate cells during vegetative growth","type":"exact"},{"name":"more cells with two nuclei during vegetative growth","type":"exact"}],"termid":"FYPO:0009019"}


id: PBO:0054928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2342","termid":"PBO:0054928"}


id: PBO:0055241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2668","termid":"PBO:0055241"}


id: PBO:0064591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member J","termid":"PBO:0064591"}


id: PR:Q00619
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mam2 gene.","definition_xrefs":["UniProtKB:Q00619","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheromone P-factor receptor (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11H11.04","synonyms":[{"name":"Spom972h-mam2","type":"exact"}],"termid":"PR:Q00619"}


id: PBO:0012228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"name derivation, Seg1-Like Eisosome protein","termid":"PBO:0012228"}


id: PBO:0027323
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_mtDNA_level","termid":"PBO:0027323"}


id: GO:0046453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dipyrrins (pyrromethanes), compounds containing two pyrrole rings linked through a methine, -CH=, group.","definition_xrefs":["PMID:17430001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dipyrrin metabolic process","synonyms":[{"name":"dipyrrin metabolism","type":"exact"}],"termid":"GO:0046453"}


id: GO:0050600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an 11,12-saturated fatty acyl-CoA + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = an (11E)-delta11-fatty acyl-CoA + 2 Fe(III)-[cytochrome b5] + 2 H2O.","definition_xrefs":["RHEA:46396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA desaturase activity","termid":"GO:0016215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"acyl-CoA 11-(E)-desaturase activity","secondary_identifiers":["MetaCyc:1.14.99.31-RXN","EC:1.14.19.24"],"synonyms":[{"name":"acyl-CoA delta11-desaturase activity","type":"broad"},{"name":"myristoyl-CoA 11-(E) desaturase activity","type":"narrow"}],"termid":"GO:0050600"}


id: PBO:0041469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 21","termid":"PBO:0041469"}


id: PBO:0086245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that may be involved in pH regulation; probable ortholog of A. nidulans PalC, which is involved in pH regulation and binds to the ESCRT-III complex; null mutant does not properly process Rim101p and has decreased resistance to rapamycin; GFP-fusion protein is cytoplasmic; relative distribution to cytoplasm increases upon DNA replication stress","termid":"PBO:0086245"}


id: GO:0071610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of chemokine (C-C motif) ligand 1 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 1 production","synonyms":[{"name":"CCL1 production","type":"exact"},{"name":"T cell activation 3 production","type":"exact"},{"name":"TCA-3 production","type":"exact"}],"termid":"GO:0071610"}


id: PBO:0056004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3","termid":"PBO:0056004"}


id: GO:0102287
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-coumaryl-CoA + 3-oxooctanoyl-CoA + H2O = 4-coumaroylhexanoylmethane + 2 coenzyme A + carbon dioxide.","definition_xrefs":["GOC:pz","EC:2.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"4-coumaroylhexanoylmethane synthase activity","secondary_identifiers":["MetaCyc:RXN-12668"],"termid":"GO:0102287"}


id: GO:1904616
data:
  {"annotated_genes":["SJAG_04887","SJAG_03088"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101195,91350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904530"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of actin binding.","definition_xrefs":["PMID:8621557","GOC:mr","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein binding","termid":"GO:0043393"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03088":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of actin binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of membrane associated actin binding","type":"narrow"}],"termid":"GO:1904616","terms_by_termid":{"GO:1904530":null}}


id: PBO:0089958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ragulator complex Rag GEF subunit","termid":"PBO:0089958"}


id: PBO:0038348
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-active_ingredient_in'","termid":"PBO:0038348"}


id: PBO:0077622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymosin beta 15A","termid":"PBO:0077622"}


id: PBO:0113250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of four core subunits of the ESCRT-III complex; involved in the sorting of transmembrane proteins into the multivesicular body (MVB) pathway; recruited from the cytoplasm to endosomal membranes; subunit of the endosomal sorting complex required for transport III (ESCRT-III) that forms flat spirals on lipid monolayers as part of the complexes role in driving membrane abscission","termid":"PBO:0113250"}


id: GO:0140239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vesicle-mediated transport process in which the postsynapse take up external materials or membrane constituents by the invagination of a small region of the plasma membrane to form a new membrane-bounded vesicle.","definition_xrefs":["PMID:12839988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytosis","termid":"GO:0006897"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"vesicle-mediated transport in synapse","termid":"GO:0099003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"postsynaptic endocytosis","termid":"GO:0140239"}


id: GO:1900834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of emericellin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of xanthone-containing compound biosynthetic process","termid":"GO:1900183"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"emericellin biosynthetic process","termid":"GO:1900766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of emericellin biosynthetic process","synonyms":[{"name":"regulation of Variecoxanthone B anabolism","type":"related"},{"name":"regulation of Variecoxanthone B biosynthesis","type":"related"},{"name":"regulation of Variecoxanthone B biosynthetic process","type":"related"},{"name":"regulation of Variecoxanthone B formation","type":"related"},{"name":"regulation of Variecoxanthone B synthesis","type":"related"},{"name":"regulation of emericellin anabolism","type":"exact"},{"name":"regulation of emericellin biosynthesis","type":"exact"},{"name":"regulation of emericellin formation","type":"exact"},{"name":"regulation of emericellin synthesis","type":"exact"}],"termid":"GO:1900834"}


id: PBO:0004856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpn13a","termid":"PBO:0004856"}


id: GO:0008439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Increases the activity of the enzyme monophenol monooxygenase.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete monophenol monooxygenase activator activity (obsolete GO:0008439)","synonyms":[{"name":"monophenol monooxygenase activator activity","type":"exact"},{"name":"prophenol oxidase activator","type":"related"}],"termid":"GO:0008439"}


id: PBO:0050200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 17","termid":"PBO:0050200"}


id: PR:000045536
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding nuclear protein spi1 (Schizosaccharomyces pombe) that is non-covalently bound to GDP.","definition_xrefs":["PomBase:MAH","PRO:DAN","PMID:18422602","PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-binding nuclear protein spi1 (Schizosaccharomyces pombe)","termid":"PR:000045537"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spi1/GDP+","pombase_gene_id":"SPBC1289.03c","synonyms":[{"name":"PomBase_original_PRO_term_name: GTP-binding nuclear protein spi1, GDP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Ran-GDP","type":"broad"},{"name":"Spi1-GDP (Schizosaccharomyces pombe)","type":"exact"},{"name":"spi1/GDP+","type":"exact"}],"termid":"PR:000045536"}


id: PBO:0059054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MNX1 antisense RNA 1 (head to head)","termid":"PBO:0059054"}


id: GO:0042912
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a colicin from one side of a membrane to the other. Colicins are a group of antibiotics produced by E. coli and related species that are encoded by a group of naturally occurring plasmids, e.g. Col E1.","definition_xrefs":["ISBN:0815340729","GOC:jl","PMID:17347522","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacteriocin transmembrane transporter activity","termid":"GO:0022885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"colicin transmembrane transporter activity","termid":"GO:0042912"}


id: PBO:0026636
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phospholipid_binding","termid":"PBO:0026636"}


id: GO:1900533
data:
  {"annotated_genes":["SJAG_04972"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900535"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving palmitic acid.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"palmitic acid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1900533","terms_by_termid":{"GO:1900535":null}}


id: PBO:0061949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OR2A1 antisense RNA 1","termid":"PBO:0061949"}


id: GO:1990664
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex formed by two or more subunits of Nkx-2.5. Nkx-2.5 is an evolutionary conserved transcription factor important for the specification and differentiation of cardiomyocytes during heart development. It is also required for spleen development. It binds DNA either as a monomer, or a homodimer, or a heterodimer complex to activate or inhibit expression of genes.","definition_xrefs":["PMID:22849347","GOC:ame"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"Nkx-2.5 complex","synonyms":[{"name":"NKX.2-5 homodimer complex","type":"related"},{"name":"NKX2.5 complex","type":"related"},{"name":"NKX2E homodimer complex","type":"related"},{"name":"Nkx-2.5 homodimer complex","type":"narrow"}],"termid":"GO:1990664"}


