# terms

id: GO:1900893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tridecane metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"regulates","term_name":"tridecane metabolic process","termid":"GO:1900631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tridecane metabolic process","synonyms":[{"name":"regulation of tridecane metabolism","type":"exact"}],"termid":"GO:1900893"}


id: PBO:0050041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 9 (pseudogene)","termid":"PBO:0050041"}


id: GO:0008779
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-[acyl-carrier protein] + O-(2-acyl-sn-glycero-3-phospho)ethanolamine = [acyl-carrier protein] + O-(1-beta-acyl-2-acyl-sn-glycero-3-phospho)ethanolamine.","definition_xrefs":["EC:2.3.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase activity","secondary_identifiers":["RHEA:10304","MetaCyc:ACYLGPEACYLTRANS-RXN"],"synonyms":[{"name":"acyl-ACP-phospholipid O-acyltransferase activity","type":"exact"},{"name":"acyl-[acyl-carrier protein]-phospholipid O-acyltransferase activity","type":"exact"},{"name":"acyl-acyl-carrier-protein-phospholipid O-acyltransferase activity","type":"related"},{"name":"acyl-acyl-carrier-protein:O-(2-acyl-sn-glycero-3-phospho)-ethanolamine O-acyltransferase activity","type":"related"}],"termid":"GO:0008779"}


id: GO:1990657
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of stimulus-inducible nitric-oxide synthase activity. S-nitrosylates cysteine residues in target proteins, a principal mechanism of nitric oxide (NO)-mediated signal transduction. In mammals consists of NOS2, S100A8 and S100A9. S100A9 acts both as an adaptor linking NOS2 to its target and as a transnitrosylase that transfers the nitric oxide moiety from NOS2 to its target, via its own S-nitrosylated cysteine.","definition_xrefs":["PMID:25417112","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitric-oxide synthase complex","termid":"GO:1903958"},{"relation_name":"is_a","term_name":"transnitrosylase complex","termid":"GO:1990658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"iNOS-S100A8/A9 complex","termid":"GO:1990657"}


id: PBO:0069494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 761, pseudogene","termid":"PBO:0069494"}


id: PBO:0031326
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cycloheximide","termid":"PBO:0031326"}


id: GO:0061290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes that contribute to the progression of the metanephric kidney over time. In this pathway, the activated receptor signals via downstream effectors that result in the inhibition of beta-catenin phosphorylation, thereby preventing degradation of beta-catenin. Stabilized beta-catenin can then accumulate and travel to the nucleus to trigger changes in transcription of target genes.","definition_xrefs":["GOC:mtg_kidney_jan10"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in metanephric kidney development (obsolete GO:0061290)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in metanephric kidney development","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in metanephric kidney development","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in metanephric kidney development","type":"exact"}],"termid":"GO:0061290"}


id: PR:Q9P7N3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 41 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00654","PANTHER:PTHR12616:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 41 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.05c","secondary_identifiers":["UniProtKB:Q9P7N3"],"synonyms":[{"name":"Spom972h-VPS41","type":"exact"}],"termid":"PR:Q9P7N3"}


id: PBO:0053915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1210","termid":"PBO:0053915"}


id: PBO:0083904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Flavin-containing monooxygenase; localized to the cytoplasmic face of the ER membrane; catalyzes oxidation of biological thiols to maintain the ER redox buffer ratio for correct folding of disulfide-bonded proteins","termid":"PBO:0083904"}


id: FYPO:0005119
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a mutation causes a gene product to bind to one or more proteins with different specificity from normal. For example, a protein may bind to a protein in a mutant that it does not bind in wild type. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:25487150","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000702","FYPO:0001985"],"is_obsolete":false,"name":"altered protein binding specificity","synonyms":[{"name":"abnormal protein binding specificity","type":"exact"},{"name":"altered protein-protein interaction specificity","type":"exact"}],"termid":"FYPO:0005119"}


id: PBO:0070328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, Ro60-associated Y4","termid":"PBO:0070328"}


id: PR:P78963
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein arginine N-methyltransferase 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10738:SF0","OMA:SCHPO03206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine N-methyltransferase skb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.11c","secondary_identifiers":["UniProtKB:P78963"],"synonyms":[{"name":"Spom972h-PRMT5","type":"exact"},{"name":"shk1 kinase-binding protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"type II PRMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"type II protein arginine N-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78963"}


id: PBO:0089361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin","termid":"PBO:0089361"}


id: GO:0061801
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A laminin complex composed of alpha3B, beta3 and gamma2 polypeptide chains.","definition_xrefs":["GOC:dph","PMID:15979864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin complex","termid":"GO:0043256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"laminin-5B complex","synonyms":[{"name":"laminin 3B32 complex","type":"exact"}],"termid":"GO:0061801"}


id: PBO:0025450
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human GNB2L1","termid":"PBO:0025450"}


id: PATO:0002186
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A molecular quality that inheres in a molecular entity by virtue of whether or not the molecular entity has a separation of electric charge which leads to the molecule having an electric dipole.","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polarity","termid":"PATO:0002186"}


id: PBO:0050424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein H1 pseudogene 3","termid":"PBO:0050424"}


id: PBO:0041011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bisphosphoglycerate mutase","termid":"PBO:0041011"}


id: PATO:0002492
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed anterolaterally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterolateral orientation","synonyms":[{"name":"anterolaterally directed","type":"exact"}],"termid":"PATO:0002492"}


id: GO:0008546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Physical interaction between microtubules and chromatin via DNA binding proteins.","definition_xrefs":["PMID:10322137"],"gene_count":0,"genotype_count":0,"name":"obsolete microtubule/chromatin interaction (obsolete GO:0008546)","synonyms":[{"name":"microtubule/chromatin interaction","type":"exact"}],"termid":"GO:0008546"}


id: PBO:0047994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member K, pseudogene","termid":"PBO:0047994"}


id: FYPO:0005249
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of caesium ions than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002682","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"resistance to caesium","synonyms":[{"name":"resistance to caesium during mitotic cell cycle","type":"related"},{"name":"resistance to caesium during vegetative growth","type":"exact"},{"name":"resistance to caesium ions","type":"exact"},{"name":"resistance to cesium","type":"exact"},{"name":"resistant to caesium","type":"exact"}],"termid":"FYPO:0005249"}


id: GO:1901998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a toxin into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:TermGenie","GOC:dph","PMID:17118486"],"gene_count":0,"genotype_count":0,"name":"obsolete toxin transport (obsolete GO:1901998)","termid":"GO:1901998"}


id: GO:0050203
data:
  {"annotated_genes":["SJAG_00947"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111837],"is_not":false,"summary":null,"term":"GO:0050203"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + CoA + oxalate = AMP + diphosphate + H+ + oxalyl-CoA.","definition_xrefs":["RHEA:18293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00947":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxalate-CoA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:OXALATE--COA-LIGASE-RXN","EC:6.2.1.8","KEGG_REACTION:R01558"],"synonyms":[{"name":"oxalate:CoA ligase (AMP-forming)","type":"related"},{"name":"oxalyl coenzyme A synthetase activity","type":"related"},{"name":"oxalyl-CoA synthetase activity","type":"related"}],"termid":"GO:0050203","terms_by_termid":{"GO:0050203":null}}


id: PBO:0036421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome assembly chaperone 3 (predicted)","termid":"PBO:0036421"}


id: PBO:0050823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HYDIN axonemal central pair apparatus protein","termid":"PBO:0050823"}


id: GO:0090643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The radial pattern formation process that results in the formation of flowers around a central axis in an inflorescence meristem.","definition_xrefs":["PMID:25352850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phyllotactic patterning","termid":"GO:0060771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inflorescence phyllotactic patterning","termid":"GO:0090643"}


id: GO:0140817
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of ADP-ribose groups to the serine-10 or an equivalent residue of the N-terminal tail of histone H3.","definition_xrefs":["PMID:34874266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD+-protein-serine ADP-ribosyltransferase activity","termid":"GO:0140805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"NAD+-histone H3S10 serine ADP-ribosyltransferase activity","synonyms":[{"name":"NAD+-histone H3-S10 serine ADP-ribosyltransferase activity","type":"exact"},{"name":"NAD+-histone-serine ADP-ribosyltransferase activity (H3-S10 specific)","type":"exact"}],"termid":"GO:0140817"}


id: PBO:0066300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol binding protein 2","termid":"PBO:0066300"}


id: PBO:0000911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylformylglycinamidine synthase Ade3 (predicted)","termid":"PBO:0000911"}


id: PBO:0041749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin binding transcription activator 2","termid":"PBO:0041749"}


id: GO:1990223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the cytokinin levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:24124900"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of cytokinin levels in host (obsolete GO:1990223)","termid":"GO:1990223"}


id: PBO:0065754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen phosphorylase L","termid":"PBO:0065754"}


id: FYPO:0003412
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at centromere outer repeat regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at centromere outer repeat","termid":"FYPO:0002346"},{"relation_name":"is_a","term_name":"decreased chromatin silencing at centromere","termid":"FYPO:0002834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased chromatin silencing at centromere outer repeat","synonyms":[{"name":"decreased chromatin silencing at centromere otr","type":"exact"},{"name":"decreased chromatin silencing at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"decreased chromatin silencing at centromere outer repeat during vegetative growth","type":"exact"},{"name":"decreased chromatin silencing at centromere outer repeat region","type":"exact"},{"name":"decreased chromatin silencing at centromeric outer repeat region","type":"exact"},{"name":"decreased chromatin silencing at pericentric region","type":"related"},{"name":"decreased chromatin silencing at pericentromeric region","type":"related"},{"name":"decreased heterochromatin silencing at centromere outer repeat region","type":"exact"},{"name":"reduced chromatin silencing at centromere outer repeat","type":"exact"}],"termid":"FYPO:0003412"}


id: PBO:0054259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1644","termid":"PBO:0054259"}


id: PBO:0061766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OAZ1 pseudogene 1","termid":"PBO:0061766"}


id: PBO:0055235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2662","termid":"PBO:0055235"}


id: GO:0101008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of detection of, or exposure to, an increase in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.","definition_xrefs":["GOC:mec"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to increased salt (obsolete GO:0101008)","termid":"GO:0101008"}


id: GO:0003794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete acute-phase response protein activity (obsolete GO:0003794)","synonyms":[{"name":"acute-phase response protein activity","type":"exact"}],"termid":"GO:0003794"}


id: PBO:0047420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 10B","termid":"PBO:0047420"}


id: GO:0097034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The biogenesis of a mitochondrial respiratory chain complex IV (also known as cytochrome c oxidase complex), a protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Includes the synthesis of constituent proteins and their aggregation, arrangement and bonding together.","definition_xrefs":["GOC:mcc"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial respiratory chain complex IV biogenesis (obsolete GO:0097034)","synonyms":[{"name":"mitochondrial cytochrome c oxidase complex biogenesis","type":"exact"}],"termid":"GO:0097034"}


id: FYPO:0007109
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which centromere clustering is normal (i.e. indistinguishable from wild type during meiotic prometaphase I.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic centromere clustering during meiotic prometaphase I","synonyms":[{"name":"normal centromere clustering during meiotic prometaphase I","type":"exact"},{"name":"normal chromosome retrieval during meiotic prometaphase I","type":"related"},{"name":"normal kinetochore retrieval during meiotic prometaphase I","type":"related"},{"name":"normal meiotic centromere clustering during prometaphase I","type":"exact"}],"termid":"FYPO:0007109"}


id: PBO:0039341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALS2 C-terminal like","termid":"PBO:0039341"}


id: PBO:0065158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 8","termid":"PBO:0065158"}


id: GO:0052440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of symbiont ethylene-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of defense-related symbiont ethylene-mediated signal transduction pathway (obsolete GO:0052440)","synonyms":[{"name":"modulation by organism of defense-related symbiont ethylene-mediated signal transduction pathway","type":"exact"}],"termid":"GO:0052440"}


id: GO:0051751
data:
  {"annotated_genes":["SJAG_03115"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180041"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a mannose residue to an oligosaccharide, forming an alpha-(1->4) linkage.","definition_xrefs":["PMID:15772281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03115":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alpha-1,4-mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051751","terms_by_termid":{"GO:0180041":null}}


id: PBO:0072462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 26","termid":"PBO:0072462"}


id: GO:0009087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid catabolic process","termid":"GO:0000098"},{"relation_name":"is_a","term_name":"methionine metabolic process","termid":"GO:0006555"},{"relation_name":"is_a","term_name":"aspartate family amino acid catabolic process","termid":"GO:0009068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0006790","GO:0044281","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"methionine catabolic process","secondary_identifiers":["UM-BBD_pathwayID:met"],"synonyms":[{"name":"methionine breakdown","type":"exact"},{"name":"methionine catabolism","type":"exact"},{"name":"methionine degradation","type":"exact"}],"termid":"GO:0009087"}


id: PBO:0060303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain 12A","termid":"PBO:0060303"}


id: PATO:0000639
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer whose structure deteriorates or is lost over time due to an active pathological process.","definition_xrefs":["PATOC:PortlandMeetingFeb2015","PATOC:mb"],"direct_ancestors":[{"relation_name":"has_part","term_name":"hypotrophic","termid":"PATO:0000585"},{"relation_name":"is_a","term_name":"degeneration","termid":"PATO:0002037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerate","synonyms":[{"name":"degeneration","type":"narrow"}],"termid":"PATO:0000639"}


id: PBO:0112851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asynchronous replication autosomal RNA 15-1","termid":"PBO:0112851"}


id: FYPO:0009073
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing lysine as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0001985","FYPO:0002060","FYPO:0000139","FYPO:0002058","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"decreased cell population growth on lysine nitrogen source","synonyms":[{"name":"decreased growth on lysine nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on lysine nitrogen source","type":"exact"},{"name":"growth defect, slow growth with lysine nitrogen source","type":"related"},{"name":"reduced cell growth on lysine nitrogen source","type":"related"},{"name":"slow cell growth on lysine nitrogen source","type":"narrow"}],"termid":"FYPO:0009073"}


id: GO:0048679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of axon regeneration.","definition_xrefs":["GOC:dgh","GOC:jid","GOC:dph","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"regulation of neuron projection regeneration","termid":"GO:0070570"},{"relation_name":"is_a","term_name":"regulation of response to wounding","termid":"GO:1903034"},{"relation_name":"regulates","term_name":"axon regeneration","termid":"GO:0031103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of axon regeneration","termid":"GO:0048679"}


id: GO:1905750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endosome to plasma membrane protein transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22869721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular protein transport","termid":"GO:0090317"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to plasma membrane","termid":"GO:1903077"},{"relation_name":"is_a","term_name":"regulation of endosome to plasma membrane protein transport","termid":"GO:1905749"},{"relation_name":"is_a","term_name":"negative regulation of endocytic recycling","termid":"GO:2001136"},{"relation_name":"negatively_regulates","term_name":"endosome to plasma membrane protein transport","termid":"GO:0099638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of endosome to plasma membrane protein transport","synonyms":[{"name":"down regulation of endosome to plasma membrane protein transport","type":"exact"},{"name":"down-regulation of endosome to plasma membrane protein transport","type":"exact"},{"name":"downregulation of endosome to plasma membrane protein transport","type":"exact"},{"name":"inhibition of endosome to plasma membrane protein transport","type":"narrow"}],"termid":"GO:1905750"}


id: GO:0052050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the other organism by a type IV secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via substance secreted by type IV secretion system (obsolete GO:0052050)","termid":"GO:0052050"}


id: PBO:0061964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AD member 1 pseudogene","termid":"PBO:0061964"}


id: GO:0016740
data:
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id: PBO:0048023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRY microtubule binding protein","termid":"PBO:0048023"}


id: _global:existence_overlaps
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"x existence overlaps y if and only if either (a) the start of x is part of y or (b) the end of x is part of y. Formally: x existence starts and ends during y iff (α(x) >= α(y) & α(x) <= ω(y)) OR (ω(x) <= ω(y) & ω(x) >= α(y))","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"relation_between_physical_entity_and_a_process_or_stage","termid":"_global:relation_between_physical_entity_and_a_process_or_stage"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_overlaps","secondary_identifiers":["RO:0002490"],"termid":"_global:existence_overlaps"}


id: PBO:0041975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC15 divergent transcript","termid":"PBO:0041975"}


id: FYPO:0005311
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 4 of histone H3 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone methylation during vegetative growth","termid":"FYPO:0000861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H3-K4 methylation during vegetative growth","synonyms":[{"name":"normal histone H3 K4 methylation during vegetative growth","type":"exact"},{"name":"normal histone H3-K4 methylation during mitotic cell cycle","type":"related"},{"name":"normal histone H3K4me during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K4 methylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005311"}


id: PBO:0064648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase with EF-hand domain 2","termid":"PBO:0064648"}


id: PBO:0044702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 3 Y-linked","termid":"PBO:0044702"}


id: GO:0044090
data:
  {"annotated_genes":["SJAG_03851","SJAG_05289","SJAG_03137","SJAG_02433"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104708,104617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000786"},{"annotations":[106321,93683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061191"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a vacuole.","definition_xrefs":["GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"regulation of vacuole organization","termid":"GO:0044088"},{"relation_name":"positively_regulates","term_name":"vacuole organization","termid":"GO:0007033"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02433":null,"SJAG_03137":null,"SJAG_03851":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vacuole organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of vacuole biogenesis","type":"related"},{"name":"positive regulation of vacuole organisation","type":"exact"}],"termid":"GO:0044090","terms_by_termid":{"GO:0061191":null,"GO:2000786":null}}


id: PR:Q10295
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A poly(A) polymerase beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02640","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) polymerase pla1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC646.04","secondary_identifiers":["UniProtKB:Q10295"],"synonyms":[{"name":"PAP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PAPOLB","type":"exact"},{"name":"polynucleotide adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10295"}


id: GO:0047788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(2-hydroxyphenyl)propanoate + NAD+ = trans-2-coumarate + H+ + NADH.","definition_xrefs":["EC:1.3.1.11","RHEA:21444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2-coumarate reductase activity","secondary_identifiers":["KEGG_REACTION:R03709","MetaCyc:COUMARATE-REDUCTASE-RXN"],"synonyms":[{"name":"3-(2-hydroxyphenyl)propanoate:NAD+ oxidoreductase activity","type":"related"},{"name":"coumarate reductase activity","type":"exact"},{"name":"melilotate dehydrogenase activity","type":"related"}],"termid":"GO:0047788"}


id: GO:0002004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of the hormone vasopressin into the blood stream by the hypothalamus and pituitary gland contributing to fast regulation of blood pressure.","definition_xrefs":["ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasopressin secretion","termid":"GO:0030103"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by vasopressin","termid":"GO:0001992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"secretion of vasopressin involved in fast regulation of systemic arterial blood pressure","synonyms":[{"name":"secretion of vasopressin during fast control of blood pressure","type":"related"},{"name":"secretion of vasopressin during fast regulation of systemic arterial blood pressure","type":"related"}],"termid":"GO:0002004"}


id: GO:0075193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of symbiont haustorium mother cell formation. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"haustorium mother cell formation","termid":"GO:0075192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of haustorium mother cell formation","synonyms":[{"name":"regulation of haustorium mother cell formation on or near host","type":"exact"}],"termid":"GO:0075193"}


id: PBO:0002761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GTPase involved in translation Guf1 (predicted)","termid":"PBO:0002761"}


id: PBO:0039966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 2 binding protein pseudogene 9","termid":"PBO:0039966"}


id: GO:0044677
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisted of eight polypeptides. This complex catalyzes the formation of methyl-coenzyme M and H4MPT from N5-methyl-H4MPT and CoM during methanogenesis.","definition_xrefs":["PMID:8477726","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"methyl-tetrahydromethanopterin:coenzyme M methyltransferase complex","synonyms":[{"name":"5-methyl-5,6,7,8-tetrahydromethanopterin:2-mercaptoethane sulfonate 2-methyltransferase complex","type":"exact"},{"name":"N5-methyltetrahydromethanopterin-coenzyme M methyltransferase complex","type":"exact"},{"name":"coenzyme M methyltransferase complex","type":"broad"},{"name":"methyl-H4MPT","type":"broad"}],"termid":"GO:0044677"}


id: PBO:0060385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYT1L antisense RNA 1","termid":"PBO:0060385"}


id: PATO:0001386
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An aneuploidy quality inhering in a bearer by virtue of the bearer's containing only one chromosome from a pair in a cell's nucleus.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Monosomy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aneuploid","termid":"PATO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monosomy","termid":"PATO:0001386"}


id: PBO:0057112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 200a","termid":"PBO:0057112"}


id: GO:1903978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microglial cell activation.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:TermGenie","GOC:nc","PMID:19100238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macrophage activation","termid":"GO:0043030"},{"relation_name":"is_a","term_name":"regulation of neuroinflammatory response","termid":"GO:0150077"},{"relation_name":"regulates","term_name":"microglial cell activation","termid":"GO:0001774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of microglial cell activation","termid":"GO:1903978"}


id: PBO:0050629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor 4","termid":"PBO:0050629"}


id: GO:0062168
data:
  {"annotated_genes":["SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97498],"is_not":false,"summary":null,"term":"GO:0062168"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of plus-end directed microtubule sliding.","definition_xrefs":["PMID:21892183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of plus-end directed microtubule sliding","termid":"GO:0062169"},{"relation_name":"negatively_regulates","term_name":"plus-end directed microtubule sliding","termid":"GO:0031535"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of plus-end directed microtubule sliding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062168","terms_by_termid":{"GO:0062168":null}}


id: PBO:0084596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YJL018W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YJL019W","termid":"PBO:0084596"}


id: PBO:0057291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 509-3","termid":"PBO:0057291"}


id: PBO:0036465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human IFRD1 ortholog","termid":"PBO:0036465"}


id: PBO:0066633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab interacting lysosomal protein like 2","termid":"PBO:0066633"}


id: GO:0071539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, the centrosome.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule organizing center","termid":"GO:1905508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to centrosome","synonyms":[{"name":"protein localisation to centrosome","type":"exact"}],"termid":"GO:0071539"}


id: SO:0000188
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a primary transcript that is transcribed, but removed from within the transcript by splicing together the sequences (exons) on either side of it.","direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript_region","termid":"SO:0000835"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intron","secondary_identifiers":["http://en.wikipedia.org/wiki/Intron"],"synonyms":[{"name":"INSDC_feature:intron","type":"exact"}],"termid":"SO:0000188"}


id: GO:0120189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the controlled release of bile acid from a cell or a tissue.","definition_xrefs":["PMID:22767443","GOC:rph","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"regulation of bile acid secretion","termid":"GO:0120188"},{"relation_name":"positively_regulates","term_name":"bile acid secretion","termid":"GO:0032782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of bile acid secretion","termid":"GO:0120189"}


id: GO:0050641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + 3 H+ + 3 malonyl-CoA + NADPH = 6-methylsalicylate + 3 CO2 + 4 CoA + H2O + NADP+.","definition_xrefs":["RHEA:12240","EC:2.3.1.165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"6-methylsalicylic acid synthase activity","secondary_identifiers":["KEGG_REACTION:R07253","MetaCyc:2.3.1.165-RXN"],"synonyms":[{"name":"6-MSAS activity","type":"related"},{"name":"MSAS activity","type":"related"},{"name":"acyl-CoA:malonyl-CoA C-acyltransferase (decarboxylating, oxoacyl-reducing, thioester-hydrolysing and cyclizing)","type":"related"}],"termid":"GO:0050641"}


id: PBO:0073330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 6","termid":"PBO:0073330"}


id: PBO:0045054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in lymphocytic leukemia 2","termid":"PBO:0045054"}


id: GO:0090092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the series of molecular signals generated as a consequence of a transmembrane receptor serine/threonine kinase binding to its physiological ligand.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"cell surface receptor protein serine/threonine kinase signaling pathway","termid":"GO:0007178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","synonyms":[{"name":"regulation of transmembrane receptor protein serine/threonine kinase signalling pathway","type":"exact"}],"termid":"GO:0090092"}


id: PBO:0070476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 11","termid":"PBO:0070476"}


id: PATO:0000944
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a sharp or tapered end or point.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sharpness","synonyms":[{"name":"apiculate","type":"exact"}],"termid":"PATO:0000944"}


id: PBO:0039035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with GTPase domain, ankyrin repeat and PH domain 12, pseudogene","termid":"PBO:0039035"}


id: PBO:0041663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit gamma 8","termid":"PBO:0041663"}


id: PBO:0079924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"URB1 antisense RNA 1 (head to head)","termid":"PBO:0079924"}


id: MOD:00776
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"An artifactual protein modification that converts an L-histidine residue to L-aspartic acid by oxidative degradation.","definition_xrefs":["PubMed:9252331","Unimod:349","OMSSA:55"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-aspartic acid residue","termid":"MOD:00013"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aspartic acid (His)","synonyms":[{"name":"His->Asp","type":"related"},{"name":"his2asph","type":"exact"},{"name":"histidine oxidation to aspartic acid","type":"related"}],"termid":"MOD:00776"}


id: GO:1904573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of selenocysteine insertion sequence binding.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:19716792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA binding","termid":"GO:1902415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of selenocysteine insertion sequence binding","synonyms":[{"name":"regulation of SECIS binding","type":"exact"}],"termid":"GO:1904573"}


id: FYPO:0003047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a larger region near the silent mating-type cassette than normal, such that it extends beyond the IRR boundary element.","definition_xrefs":["PomBase:mah","PMID:24013502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased spatial extent of heterochromatin assembly","termid":"FYPO:0007953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"heterochromatin assembly beyond boundary element IRR","synonyms":[{"name":"heterochromatin assembly beyond boundary element IRR during mitotic cell cycle","type":"related"},{"name":"heterochromatin assembly beyond boundary element IRR during vegetative growth","type":"exact"},{"name":"heterochromatin formation beyond boundary element IRR","type":"exact"}],"termid":"FYPO:0003047"}


id: GO:0044056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by a symbiont organism of the functioning of a digestive system process, a physical, chemical, or biochemical process carried out by the host organism to break down ingested nutrients into components that may be easily absorbed and directed into metabolism.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host digestive system process (obsolete GO:0044056)","synonyms":[{"name":"regulation by symbiont of host digestive system process","type":"exact"}],"termid":"GO:0044056"}


id: PBO:0089602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear import protein Nxt2","termid":"PBO:0089602"}


id: PBO:0018086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-C ortholog Cnp3","termid":"PBO:0018086"}


id: PBO:0055812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidylglycerol acyltransferase 1 pseudogene 1","termid":"PBO:0055812"}


id: PBO:0047760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folate receptor beta","termid":"PBO:0047760"}


id: PBO:0016877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uniprot_identifier","termid":"PBO:0016877"}


id: PBO:0062174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 17","termid":"PBO:0062174"}


id: PBO:0052220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily V member 1","termid":"PBO:0052220"}


id: GO:0004121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cystathionine + H2O = L-homocysteine + NH3 + pyruvate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cystathionine beta-lyase activity (obsolete GO:0004121)","termid":"GO:0004121"}


id: FYPO:0007673
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which invertase activity (beta-fructofuranosidase activity) is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal invertase activity","termid":"FYPO:0005741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abolished invertase activity","synonyms":[{"name":"abolished beta-fructofuranosidase activity","type":"exact"},{"name":"invertase activity abolished","type":"exact"}],"termid":"FYPO:0007673"}


id: PBO:0058937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle positioning","termid":"PBO:0058937"}


id: PBO:0061966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AF member 1 pseudogene","termid":"PBO:0061966"}


id: GO:0003911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + nicotinamide nucleotide + deoxyribonucleotide(n+m).","definition_xrefs":["EC:6.5.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA ligase activity","termid":"GO:0003909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"DNA ligase (NAD+) activity","secondary_identifiers":["MetaCyc:DNA-LIGASE-NAD+-RXN"],"synonyms":[{"name":"polynucleotide ligase","type":"broad"},{"name":"DNA joinase activity","type":"broad"},{"name":"DNA ligase (NAD)","type":"related"},{"name":"DNA repair enzyme activity","type":"related"},{"name":"DNA-joining enzyme","type":"related"},{"name":"deoxyribonucleate ligase","type":"broad"},{"name":"deoxyribonucleic acid joinase","type":"broad"},{"name":"deoxyribonucleic acid ligase","type":"broad"},{"name":"deoxyribonucleic joinase","type":"broad"},{"name":"deoxyribonucleic ligase","type":"broad"},{"name":"deoxyribonucleic repair enzyme","type":"related"},{"name":"deoxyribonucleic-joining enzyme","type":"related"},{"name":"poly(deoxyribonucleotide):poly(deoxyribonucleotide) ligase (AMP-forming, NMN-forming)","type":"related"},{"name":"polydeoxyribonucleotide synthase (NAD(+)) activity","type":"related"},{"name":"polydeoxyribonucleotide synthase (NAD)","type":"related"},{"name":"polydeoxyribonucleotide synthase (NAD+) activity","type":"related"},{"name":"polynucleotide ligase (NAD(+)) activity","type":"related"},{"name":"polynucleotide ligase (NAD)","type":"related"},{"name":"polynucleotide ligase (NAD+) activity","type":"related"},{"name":"polynucleotide ligase (nicotinamide adenine dinucleotide)","type":"related"},{"name":"polynucleotide synthetase (nicotinamide adenine dinucleotide)","type":"related"},{"name":"polynucleotide synthetase activity","type":"related"}],"termid":"GO:0003911"}


id: GO:0030648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an aminoglycoside antibiotic, any member of a group of broad spectrum antibiotics, of similar toxicity and pharmacology, that contain an aminodeoxysugar, an amino- or guanidino-substituted inositol ring, and one or more residues of other sugars. The group includes streptomycin, neomycin, framycetin, kanamycin, paromomycin, and gentamicin.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"antibiotic biosynthetic process","termid":"GO:0017000"},{"relation_name":"is_a","term_name":"aminoglycoside antibiotic metabolic process","termid":"GO:0030647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aminoglycoside antibiotic biosynthetic process","synonyms":[{"name":"aminoglycoside antibiotic anabolism","type":"exact"},{"name":"aminoglycoside antibiotic biosynthesis","type":"exact"},{"name":"aminoglycoside antibiotic formation","type":"exact"},{"name":"aminoglycoside antibiotic synthesis","type":"exact"}],"termid":"GO:0030648"}


id: PR:P36591
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dfr1 gene.","definition_xrefs":["UniProtKB:P36591","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.08c","synonyms":[{"name":"Spom972h-dfr1","type":"exact"}],"termid":"PR:P36591"}


id: PBO:0061774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OBSCN antisense RNA 1","termid":"PBO:0061774"}


id: PBO:0044772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 54","termid":"PBO:0044772"}


id: PBO:0086074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function thought to be involved in endocytosis; physically interacts with Ede1p and is found at endocytic sites at cell periphery during early stages of endocytosis; green fluorescent protein (GFP)-fusion protein localizes to bud neck; potential Cdc28p substrate; similar to S. pombe Pal1 protein; relocalizes from bud neck to cytoplasm upon DNA replication stress; PAL1 has a paralog, YHR097C, that arose from the whole genome duplication","termid":"PBO:0086074"}


id: PBO:0073682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirtuin 4","termid":"PBO:0073682"}


id: PBO:0049124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor class C group 5 member A","termid":"PBO:0049124"}


id: GO:0044251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of a protein by pepsin in the stomach. Pepsin is generated from its precursor pepsinogen, which is activated by hydrolchloric acid (gastric acid).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete protein catabolic process by pepsin (obsolete GO:0044251)","synonyms":[{"name":"protein breakdown by pepsin","type":"exact"},{"name":"protein degradation by pepsin","type":"exact"}],"termid":"GO:0044251"}


id: PBO:0084316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"JmjC domain family histone demethylase specific for H3-K36; similar to proteins found in human, mouse, drosophila, X. laevis, C. elegans, and S. pombe","termid":"PBO:0084316"}


id: GO:0017135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The interaction with synapse-associated membrane-associated protein with guanylate kinase activity.","definition_xrefs":["PMID:10207005"],"gene_count":0,"genotype_count":0,"name":"obsolete membrane-associated protein with guanylate kinase activity interacting (obsolete GO:0017135)","synonyms":[{"name":"membrane-associated protein with guanylate kinase activity interacting","type":"exact"}],"termid":"GO:0017135"}


id: PBO:0088332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial thioredoxin family protein, implicated in sulfur cluster assembly","termid":"PBO:0088332"}


id: PBO:0000848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex subunit Psm3","termid":"PBO:0000848"}


id: PBO:0084552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the seripauperin multigene family; encoded mainly in subtelomeric regions; induced during alcoholic fermentation; induced by low temperature and also by anaerobic conditions; negatively regulated by oxygen and repressed by heme","termid":"PBO:0084552"}


id: PBO:0060455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglutamate synthase","termid":"PBO:0060455"}


id: FYPO:0000692
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-1,N6-ethenoadenine N-glycosylase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA N-glycosylase activity","termid":"FYPO:0008216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abnormal DNA-1,N6-ethenoadenine N-glycosylase activity","termid":"FYPO:0000692"}


id: PBO:0089563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Tsr2","termid":"PBO:0089563"}


id: GO:0035262
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the gonads are generated and organized. A gonad is an animal organ producing gametes, e.g. the testes or the ovary in mammals.","definition_xrefs":["ISBN:0198612001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"gonad development","termid":"GO:0008406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gonad morphogenesis","termid":"GO:0035262"}


id: PBO:0042513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin related family member 18, pseudogene","termid":"PBO:0042513"}


id: GO:1904931
data:
  {"annotated_genes":["SJAG_00399"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99024],"is_not":false,"summary":null,"term":"GO:1904931"}]},"cv_name":"molecular_function","definition":"Binding to an MCM complex.","definition_xrefs":["PMID:12604790","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00399":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"MCM complex binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mini-chromosome maintenance complex binding","type":"exact"}],"termid":"GO:1904931","terms_by_termid":{"GO:1904931":null}}


id: PBO:0053321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 106","termid":"PBO:0053321"}


id: GO:0034883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: isonicotinate + 2 H+ + 2 e- = 1,4-dihydroisonicotinate.","definition_xrefs":["UM-BBD_reactionID:r1347"],"gene_count":0,"genotype_count":0,"name":"obsolete isonicotinate reductase activity (obsolete GO:0034883)","synonyms":[{"name":"isonicotinate reductase activity","type":"exact"}],"termid":"GO:0034883"}


id: PBO:0113496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation elongation factor eIF-5A; required for translation of proteins containing polyproline stretches; structural homolog of bacterial EF-P; undergoes an essential hypusination modification; HYP2 has paralog ANB1 that arose from whole genome duplication; in humans EIF5A variants cause a disorder characterized by variable combinations of developmental delay, microcephaly, micrognathia and dysmorphism; human EIF5A complements inviability of yeast hyp2 anb1 double null mutant","termid":"PBO:0113496"}


id: FYPO:0007166
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex does not occur during prophase of the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex during meiotic cell cycle","termid":"FYPO:0007165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to cell cortex during meiotic prophase I","synonyms":[{"name":"abolished protein localization to cell cortex during prophase I","type":"exact"},{"name":"protein absent from cell cortex during meiotic prophase I","type":"related"},{"name":"protein localization to cell cortex abolished during meiotic prophase I","type":"exact"}],"termid":"FYPO:0007166"}


id: SO:0001842
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element with consensus sequence TGACTCA, bound by AP-1 and related transcription factors.","definition_xrefs":["PMID:3034432","PMID:1899230","PMID:3125983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP_1_binding_site","synonyms":[{"name":"AP-1 binding site","type":"exact"}],"termid":"SO:0001842"}


id: GO:0046180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ketogluconate, the anion of ketogluconic acid, an aldonic acid derived from glucose containing a ketonic carbonyl group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketogluconate metabolic process","termid":"GO:0019522"},{"relation_name":"is_a","term_name":"aldonic acid biosynthetic process","termid":"GO:0046175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"ketogluconate biosynthetic process","synonyms":[{"name":"ketogluconate anabolism","type":"exact"},{"name":"ketogluconate biosynthesis","type":"exact"},{"name":"ketogluconate formation","type":"exact"},{"name":"ketogluconate synthesis","type":"exact"}],"termid":"GO:0046180"}


id: PBO:0075344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sortilin 1","termid":"PBO:0075344"}


id: GO:0019815
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An immunoglobulin complex that is present in the plasma membrane of B cells and that in its canonical form is composed of two identical immunoglobulin heavy chains and two identical immunoglobulin light chains and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"},{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"B cell receptor complex","secondary_identifiers":["GO:0042570"],"synonyms":[{"name":"B cell receptor accessory molecule complex","type":"related"},{"name":"B lymphocyte receptor complex","type":"exact"},{"name":"B-cell receptor complex","type":"exact"},{"name":"B-lymphocyte receptor complex","type":"exact"},{"name":"BCR complex","type":"exact"},{"name":"antibody","type":"related"},{"name":"immunoglobulin complex, membrane bound","type":"exact"}],"termid":"GO:0019815"}


id: PBO:0078670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 3-5","termid":"PBO:0078670"}


id: PBO:0046873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 3 member C2, pseudogene","termid":"PBO:0046873"}


id: PBO:0028368
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_GT_microsatellite_DNA_binding","termid":"PBO:0028368"}


id: GO:0015103
data:
  {"annotated_genes":["SJAG_00233","SJAG_03401","SJAG_02463","SJAG_01168","SJAG_01183","SJAG_01973","SJAG_01059","SJAG_00547","SJAG_00612","SJAG_01941","SJAG_04241","SJAG_00671","SJAG_01033"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046715"},{"annotations":[98921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[107024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080139"},{"annotations":[107726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005254"},{"annotations":[96879,109808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903425"},{"annotations":[99851,100674,105755,90101,108790,112588,111862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005315"},{"annotations":[101748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015379"},{"annotations":[106177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008271"},{"annotations":[107025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005452"},{"annotations":[106178,112703,84485,96408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015116"},{"annotations":[84486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015117"}]},"cv_name":"molecular_function","definition":"Enables the transfer of inorganic anions from one side of a membrane to the other. Inorganic anions are atoms or small molecules with a negative charge which do not contain carbon in covalent linkage.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic molecular entity transmembrane transporter activity","termid":"GO:0015318"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00233":null,"SJAG_00547":null,"SJAG_00612":null,"SJAG_00671":null,"SJAG_01033":null,"SJAG_01059":null,"SJAG_01168":null,"SJAG_01183":null,"SJAG_01941":null,"SJAG_01973":null,"SJAG_02463":null,"SJAG_03401":null,"SJAG_04241":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"inorganic anion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015103","terms_by_termid":{"GO:0005254":null,"GO:0005315":null,"GO:0005452":null,"GO:0008271":null,"GO:0015116":null,"GO:0015117":null,"GO:0015379":null,"GO:0046715":null,"GO:0080139":null,"GO:0140987":null,"GO:1903425":null}}


id: PBO:0066008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RALGPS2 antisense RNA 1","termid":"PBO:0066008"}


id: PBO:0044017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 gamma 1","termid":"PBO:0044017"}


id: PBO:0051558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL10RB divergent transcript","termid":"PBO:0051558"}


id: GO:1990442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway is induced in response to nitrosative stress; a state often resulting from exposure to high levels of nitric oxide (NO) or the highly reactive oxidant peroxynitrite, which is produced following interaction of NO with superoxide anions.","definition_xrefs":["GOC:PARL","PMID:23985028","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrosative stress","termid":"GO:0071500"},{"relation_name":"is_a","term_name":"intrinsic apoptotic signaling pathway","termid":"GO:0097193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"intrinsic apoptotic signaling pathway in response to nitrosative stress","synonyms":[{"name":"nitrosative stress-induced apoptosis","type":"related"},{"name":"nitrosative stress-induced intrinsic apoptotic signaling pathway","type":"exact"}],"termid":"GO:1990442"}


id: GO:0051519
data:
  {"annotated_genes":["SJAG_00514","SJAG_03581","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85929,90636,91907],"is_not":false,"summary":null,"term":"GO:0051519"}]},"cv_name":"biological_process","definition":"Any process that initiates the inactive process of bipolar cell growth, polarized growth from both ends of a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of bipolar cell growth","termid":"GO:0051518"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_02392":null,"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of bipolar cell growth","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051519","terms_by_termid":{"GO:0051519":null}}


id: GO:0002692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of cellular extravasation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte migration","termid":"GO:0002686"},{"relation_name":"is_a","term_name":"regulation of cellular extravasation","termid":"GO:0002691"},{"relation_name":"negatively_regulates","term_name":"cellular extravasation","termid":"GO:0045123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular extravasation","synonyms":[{"name":"down regulation of cellular extravasation","type":"exact"},{"name":"down-regulation of cellular extravasation","type":"exact"},{"name":"downregulation of cellular extravasation","type":"exact"},{"name":"inhibition of cellular extravasation","type":"narrow"}],"termid":"GO:0002692"}


id: PBO:0113375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative calcium channel involved in calcium release under hypotonic stress; required for uptake of FAD into endoplasmic reticulum; involved in cell wall maintenance; targeted to vacuole via AP-3 pathway; FLC2 has a paralog, YOR365C, that arose from the whole genome duplication","termid":"PBO:0113375"}


id: GO:0110066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mitotic telomere clustering during interphase.","definition_xrefs":["PMID:25778919","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of interphase mitotic telomere clustering","termid":"GO:0110065"},{"relation_name":"negatively_regulates","term_name":"interphase mitotic telomere clustering","termid":"GO:0120110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of interphase mitotic telomere clustering","synonyms":[{"name":"negative regulation of mitotic telomere clustering during interphase","type":"exact"},{"name":"telomere dispersion during interphase","type":"exact"}],"termid":"GO:0110066"}


id: GO:0007268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vesicular release of classical neurotransmitter molecules from a presynapse, across a chemical synapse, the subsequent activation of neurotransmitter receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.","definition_xrefs":["GOC:jl","MeSH:D009435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde trans-synaptic signaling","termid":"GO:0098916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"chemical synaptic transmission","secondary_identifiers":["Wikipedia:Neurotransmission"],"synonyms":[{"name":"neurotransmission","type":"related"},{"name":"signal transmission across a synapse","type":"broad"},{"name":"synaptic transmission","type":"broad"}],"termid":"GO:0007268"}


id: PBO:0057928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3654","termid":"PBO:0057928"}


id: PBO:0031888
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial Citrate Exporter","termid":"PBO:0031888"}


id: PBO:0087135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein required for the assembly of box H/ACA snoRNPs; thus required for pre-rRNA processing; forms a complex with Shq1p and interacts with H/ACA snoRNP components Nhp2p and Cbf5p; similar to Gar1p","termid":"PBO:0087135"}


id: PR:P08091
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pho1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P08091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4G3.02","synonyms":[{"name":"Spom972h-pho1","type":"exact"}],"termid":"PR:P08091"}


id: GO:0033294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ectoine, 1,4,5,6-tetrahydro-2-methyl-4-pyrimidinecarboxylic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid binding","termid":"GO:0033293"},{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ectoine binding","termid":"GO:0033294"}


id: PBO:0058694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6822","termid":"PBO:0058694"}


id: PBO:0036099
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nucleus_during_cellular_response_to_heat","termid":"PBO:0036099"}


id: GO:0160121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 3-acyl-sn-glycero-1-phospho-(1'-sn-glycerol) = 3-acyl-sn-glycero-1-phospho-(3'-acyl-1'-sn-glycerol) + sn-glycero-1-phospho-(1'-sn-glycerol).","definition_xrefs":["RHEA:77619","PMID:37708259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"bis(monoacylglycero)phosphate synthase activity","termid":"GO:0160121"}


id: PBO:0082942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic GTPase-activating protein; activates Ypt/Rab transport GTPases Ypt6p, Ypt31p and Sec4p; involved in recycling of internalized proteins and regulation of Golgi secretory function","termid":"PBO:0082942"}


id: GO:0034512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a box C/D small nucleolar RNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA binding","termid":"GO:0030515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"box C/D sno(s)RNA binding","synonyms":[{"name":"box C/D sRNA binding","type":"narrow"},{"name":"box C/D snoRNA binding","type":"narrow"}],"termid":"GO:0034512"}


id: GO:0005290
data:
  {"annotated_genes":["SJAG_03400","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93428,99909],"is_not":false,"summary":null,"term":"GO:0005290"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-histidine from one side of a membrane to the other. L-histidine is 2-amino-3-(1H-imidazol-4-yl)propanoic acid.","definition_xrefs":["GOC:mtg_transport","GOC:ai","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"aromatic amino acid transmembrane transporter activity","termid":"GO:0015173"},{"relation_name":"is_a","term_name":"basic amino acid transmembrane transporter activity","termid":"GO:0015174"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"azole transmembrane transporter activity","termid":"GO:1901474"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03256":null,"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"L-histidine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-histidine transporter activity","type":"broad"},{"name":"histidine/arginine/lysine/ornithine porter activity","type":"narrow"}],"termid":"GO:0005290","terms_by_termid":{"GO:0005290":null}}


id: PBO:0074528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA C4","termid":"PBO:0074528"}


id: PBO:0002156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fork head domain","termid":"PBO:0002156"}


id: GO:0034324
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a hexyl group to an oxygen atom on the acceptor molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"},{"relation_name":"is_a","term_name":"hexanoyltransferase activity","termid":"GO:0034327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"O-hexanoyltransferase activity","termid":"GO:0034324"}


id: _global:involved_in_regulation_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c involved in regulation of p if c is involved in some p' and p' regulates some p","direct_ancestors":[{"relation_name":"is_a","term_name":"acts_upstream_of","termid":"_global:acts_upstream_of"},{"relation_name":"is_a","term_name":"involved_in_or_involved_in_regulation_of","termid":"_global:involved_in_or_involved_in_regulation_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in_regulation_of","secondary_identifiers":["RO:0002428"],"termid":"_global:involved_in_regulation_of"}


id: PBO:0003480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ING family homolog Png2","termid":"PBO:0003480"}


id: GO:0052734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: shikimate + NAD+ = 3-dehydroshikimate + NADH + H+.","definition_xrefs":["RHEA:17741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"shikimate 3-dehydrogenase (NAD+) activity","secondary_identifiers":["EC:1.1.1.282","KEGG_REACTION:R06847"],"synonyms":[{"name":"3-dehydroshikimate reductase activity","type":"related"},{"name":"3-dehydroshikimic reductase activity","type":"related"},{"name":"DHS reductase activity","type":"broad"},{"name":"dehydroshikimic reductase activity","type":"broad"},{"name":"shikimate oxidoreductase activity","type":"broad"},{"name":"shikimate:NAD(P)(+) 3-oxidoreductase activity","type":"related"},{"name":"shikimate:NAD(P)(+) oxidoreductase activity","type":"broad"}],"termid":"GO:0052734"}


id: PBO:0030285
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_sulfide_level","termid":"PBO:0030285"}


id: PBO:0003815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin dependent monooxygenase (predicted)","termid":"PBO:0003815"}


id: GO:0044485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process which begins with venom being forced into an organism by the bite or sting of another organism, and ends with fibrinogenolysis, a process that degrades fibrinogen at a variety of Arg-Lys bonds, thus impairing fibrinogen clotting in the bloodstream of the bitten/stung organism.","definition_xrefs":["GOC:jl","PMID:17433397","PMID:17544404","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in depletion of circulating fibrinogen in another organism","termid":"GO:0044536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in fibrinogenolysis in another organism","synonyms":[{"name":"envenomation resulting in fibrinogenolysis in other organism","type":"exact"}],"termid":"GO:0044485"}


id: PBO:0075756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine racemase","termid":"PBO:0075756"}


id: GO:1990327
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XXV) chains; type XXV collagen triple helices span the plasma membrane.","definition_xrefs":["GOC:bhm","PMID:17876790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane collagen trimer","termid":"GO:0030936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"collagen type XXV trimer","termid":"GO:1990327"}


id: PBO:0089476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic phenylalanine-tRNA ligase beta subunit Frs1","termid":"PBO:0089476"}


id: PBO:0028690
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_prospore-specific_spindle_pole_body_remodeling","termid":"PBO:0028690"}


id: PBO:0063795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 23","termid":"PBO:0063795"}


id: PBO:0071713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 11","termid":"PBO:0071713"}


id: CHEBI:43040
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hadacidin","termid":"CHEBI:43040"}


id: GO:0034542
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trimethylarsine oxide + 2 H+ + 2 e- = trimethylarsine + H2O.","definition_xrefs":["UM-BBD_reactionID:r0807"],"gene_count":0,"genotype_count":0,"name":"obsolete trimethylarsine oxidase activity (obsolete GO:0034542)","termid":"GO:0034542"}


id: PBO:0047485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferredoxin 1 pseudogene 1","termid":"PBO:0047485"}


id: PBO:0045023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIRAS family GTPase 3","termid":"PBO:0045023"}


id: PBO:0113106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual-specificity kinase; required for SPB duplication and spindle checkpoint function in mitosis and meiosis; contributes to bi-orientation, promoting formation of force-generating kinetochore-microtubule attachments in meiosis I; autophosphorylation required for function; substrates include SPB proteins (Spc42p, Spc110p, Spc98p), mitotic exit network protein Mob1p, kinetochore protein Cnn1p, and checkpoint protein Mad1p; substrate of APCC(Cdh1); detected in peroxisomes; similar to human Mps1p","termid":"PBO:0113106"}


id: PBO:0017993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor transmembrane transporter Mam1","termid":"PBO:0017993"}


id: FYECO:0000328
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"LNB medium is a Low Nutrient medium containing yeast nitrogen base without amino acids, glucose, salts and vitamins.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LNB glucose medium","termid":"FYECO:0000328"}


id: GO:0009940
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an amino terminal propeptide, which functions as a sorting signal to sort away the soluble vacuolar protein from Golgi to lytic vacuole via clathrin-coated vesicles.","definition_xrefs":["GOC:sm","PMID:10871276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar sorting signal binding","termid":"GO:0010209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005048","GO:0005488"],"is_obsolete":false,"name":"amino-terminal vacuolar sorting propeptide binding","termid":"GO:0009940"}


id: PBO:0046527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum oxidoreductase 1 beta","termid":"PBO:0046527"}


id: PBO:0043674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin 1B","termid":"PBO:0043674"}


id: PBO:0027679
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitochondrial_translation","termid":"PBO:0027679"}


id: PBO:0048681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi glycoprotein 1","termid":"PBO:0048681"}


id: GO:0006848
data:
  {"annotated_genes":["SJAG_01924","SJAG_04593"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110227,90452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006850"}]},"cv_name":"biological_process","definition":"The directed movement of pyruvate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01924":null,"SJAG_04593":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"pyruvate transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006848","terms_by_termid":{"GO:0006850":null}}


id: PR:Q9P7P0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1718.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7P0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized acyltransferase C1718.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1718.04","synonyms":[{"name":"Spom972h-SPBC1718.04","type":"exact"}],"termid":"PR:Q9P7P0"}


id: GO:0072138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a mesenchymal cell population of the ureteric bud, that contributes to ureteric bud development.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"},{"relation_name":"is_a","term_name":"cell proliferation involved in mesonephros development","termid":"GO:0061209"},{"relation_name":"part_of","term_name":"ureteric bud development","termid":"GO:0001657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell proliferation involved in ureteric bud development","synonyms":[{"name":"ureteric bud mesenchymal cell proliferation","type":"broad"}],"termid":"GO:0072138"}


id: PBO:0029406
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_NADPH-hemoprotein_reductase_activity","termid":"PBO:0029406"}


id: PBO:0011059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"description","termid":"PBO:0011059"}


id: FYPO:0000250
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing L-proline as the nitrogen source.","definition_xrefs":["PMID:24344203","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002057","FYPO:0005447","FYPO:0000003","FYPO:0002058","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"decreased cell population growth on proline nitrogen source","synonyms":[{"name":"decreased growth on proline nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on proline nitrogen source","type":"exact"},{"name":"growth defect, slow growth with proline nitrogen source","type":"related"},{"name":"reduced cell growth on proline nitrogen source","type":"related"},{"name":"slow cell growth on proline nitrogen source","type":"narrow"}],"termid":"FYPO:0000250"}


id: PBO:0041505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 13 open reading frame 46","termid":"PBO:0041505"}


id: PR:Q9P6S5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ask1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P6S5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit ask1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27.02c","synonyms":[{"name":"Spom972h-ask1","type":"exact"},{"name":"associated with spindles and kinetochores protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"meiotically up-regulated gene 181 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"outer kinetochore protein ask1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6S5"}


id: PBO:0063111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARM1 antisense RNA 1","termid":"PBO:0063111"}


id: GO:0047841
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-dehydro-D-gluconate + ATP = 6-phospho-2-dehydro-D-gluconate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.13","RHEA:10788"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"dehydrogluconokinase activity","secondary_identifiers":["KEGG_REACTION:R02658","MetaCyc:DEHYDOGLUCONOKINASE-RXN"],"synonyms":[{"name":"2-ketogluconate kinase activity","type":"related"},{"name":"2-ketogluconokinase activity","type":"related"},{"name":"ATP:2-dehydro-D-gluconate 6-phosphotransferase activity","type":"related"},{"name":"dehydogluconokinase activity","type":"exact"},{"name":"ketogluconokinase (phosphorylating)","type":"related"},{"name":"ketogluconokinase activity","type":"related"}],"termid":"GO:0047841"}


id: FYPO:0002547
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to nicotinamide. Cells stop growing (and may die) at a concentration of nicotinamide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to nicotinamide","synonyms":[{"name":"hypersensitive to nicotinamide","type":"exact"},{"name":"sensitive to nicotinamide during mitotic cell cycle","type":"related"},{"name":"sensitive to nicotinamide during vegetative growth","type":"exact"}],"termid":"FYPO:0002547"}


id: GO:0015399
data:
  {"annotated_genes":["SJAG_04152","SJAG_03850","SJAG_03785","SJAG_03497","SJAG_04277","SJAG_03406","SJAG_05629","SJAG_00516","SJAG_01490","SJAG_02457","SJAG_07007","SJAG_02782","SJAG_01397","SJAG_01913","SJAG_00136","SJAG_01355","SJAG_01447","SJAG_02646","SJAG_00373","SJAG_01669","SJAG_00601","SJAG_00976","SJAG_01597","SJAG_03415","SJAG_03363","SJAG_01400","SJAG_00212","SJAG_07006","SJAG_04258","SJAG_01190","SJAG_MIT13","SJAG_03358","SJAG_02023","SJAG_04757","SJAG_MIT04","SJAG_03515","SJAG_02077","SJAG_03502","SJAG_03337","SJAG_03560","SJAG_02602","SJAG_04167","SJAG_03866","SJAG_04015","SJAG_01129","SJAG_01435","SJAG_MIT20","SJAG_01344","SJAG_05213","SJAG_01077","SJAG_01879","SJAG_05294","SJAG_04955","SJAG_01817","SJAG_02504","SJAG_03490","SJAG_00755","SJAG_02399","SJAG_01471","SJAG_MIT03"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140481"},{"annotations":[104722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015410"},{"annotations":[103240],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015421"},{"annotations":[93121,114270],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044604"},{"annotations":[108408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140679"},{"annotations":[96937,97649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140359"},{"annotations":[92133,114023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008559"},{"annotations":[91519,97078,111157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019829"},{"annotations":[114273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042626"},{"annotations":[85287,112901,84267,115117,104339,110724,110295,115118,115145,111529,115096,115146,87998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004129"},{"annotations":[108921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008137"},{"annotations":[104726,97691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005388"},{"annotations":[103911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043682"},{"annotations":[111158,97080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015662"},{"annotations":[103912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140581"},{"annotations":[108411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008556"},{"annotations":[108412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008900"},{"annotations":[83774,83773,109842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008553"},{"annotations":[108413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008554"},{"annotations":[91520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140358"},{"annotations":[95602,103647,99348,103625,96382,86953,92952,107864,101234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015450"},{"annotations":[97697,85914,86224,88100,94977,84107,91719,96076,98736,99978,105925,114795,92682,96000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046961"},{"annotations":[114228,100143,100548,109469,104016,113759,115122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008121"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute from one side of a membrane to the other, up the solute's concentration gradient, by binding the solute and undergoing a series of conformational changes. Transport works equally well in either direction and is powered by a primary energy source. Primary energy sources known to be coupled to transport are chemical such as ATP hydrolysis, redox energy and photon energy.","definition_xrefs":["PMID:31613498","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"active transmembrane transporter activity","termid":"GO:0022804"}],"gene_count":60,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00373":null,"SJAG_00516":null,"SJAG_00601":null,"SJAG_00755":null,"SJAG_00976":null,"SJAG_01077":null,"SJAG_01129":null,"SJAG_01190":null,"SJAG_01344":null,"SJAG_01355":null,"SJAG_01397":null,"SJAG_01400":null,"SJAG_01435":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01490":null,"SJAG_01597":null,"SJAG_01669":null,"SJAG_01817":null,"SJAG_01879":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02077":null,"SJAG_02399":null,"SJAG_02457":null,"SJAG_02504":null,"SJAG_02602":null,"SJAG_02646":null,"SJAG_02782":null,"SJAG_03337":null,"SJAG_03358":null,"SJAG_03363":null,"SJAG_03406":null,"SJAG_03415":null,"SJAG_03490":null,"SJAG_03497":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_03785":null,"SJAG_03850":null,"SJAG_03866":null,"SJAG_04015":null,"SJAG_04152":null,"SJAG_04167":null,"SJAG_04258":null,"SJAG_04277":null,"SJAG_04757":null,"SJAG_04955":null,"SJAG_05213":null,"SJAG_05294":null,"SJAG_05629":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT13":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"primary active transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:7.-.-.-","TC:3"],"synonyms":[{"name":"primary active transporter","type":"related"}],"termid":"GO:0015399","terms_by_termid":{"GO:0004129":null,"GO:0005388":null,"GO:0008121":null,"GO:0008137":null,"GO:0008553":null,"GO:0008554":null,"GO:0008556":null,"GO:0008559":null,"GO:0008900":null,"GO:0015410":null,"GO:0015421":null,"GO:0015450":null,"GO:0015662":null,"GO:0019829":null,"GO:0042626":null,"GO:0043682":null,"GO:0044604":null,"GO:0046961":null,"GO:0140358":null,"GO:0140359":null,"GO:0140481":null,"GO:0140581":null,"GO:0140679":null}}


id: PBO:0055720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lamin A/C","termid":"PBO:0055720"}


id: GO:0052670
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geraniol + nucleoside triphosphate = geranyl monophosphate + nucleoside diphosphate.","definition_xrefs":["GOC:kd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenol kinase activity","termid":"GO:0052673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"geraniol kinase activity","synonyms":[{"name":"geraniol phosphotransferase activity","type":"exact"}],"termid":"GO:0052670"}


id: PBO:0075294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 33","termid":"PBO:0075294"}


id: PBO:0034555
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4-K16_acetylation_at_boundary_element_IRC1L","termid":"PBO:0034555"}


id: FYPO:0005592
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of lysophosphatidylethanolamine level measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular lysophosphatidylethanolamine level","synonyms":[{"name":"decreased cellular lysophosphatidylethanolamine level during vegetative growth","type":"exact"},{"name":"decreased lysophosphatidylethanolamine accumulation","type":"related"},{"name":"reduced cellular lysophosphatidylethanolamine level","type":"exact"}],"termid":"FYPO:0005592"}


id: PBO:0050116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 26","termid":"PBO:0050116"}


id: GO:0016446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Mutations occurring somatically that result in amino acid changes in the rearranged V regions of immunoglobulins.","definition_xrefs":["PMID:7813007","PMID:14975236","PMID:11205330","ISBN:0781735149","GOC:add","PMID:11205333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors via somatic mutation","termid":"GO:0002566"},{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins","termid":"GO:0016445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"somatic hypermutation of immunoglobulin genes","synonyms":[{"name":"somatic hypermutation of antibody genes","type":"exact"}],"termid":"GO:0016446"}


id: PBO:0056832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MGAT2 pseudogene 1","termid":"PBO:0056832"}


id: PBO:0076657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 19","termid":"PBO:0076657"}


id: PATO:0000727
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000727 behavioral function value (obsolete PATO:0000727)","termid":"PATO:0000727"}


id: PBO:0002908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain protein","termid":"PBO:0002908"}


id: GO:0048790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which maintains the organization and the arrangement of proteins at the active zone to ensure the fusion and docking of vesicles and the release of neurotransmitters.","definition_xrefs":["GOC:dph","GOC:pr","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of synapse structure","termid":"GO:0099558"},{"relation_name":"is_a","term_name":"presynaptic active zone organization","termid":"GO:1990709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of presynaptic active zone structure","synonyms":[{"name":"maintenance of pre-synaptic active zone structure","type":"exact"}],"termid":"GO:0048790"}


id: PBO:0054792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2205","termid":"PBO:0054792"}


id: PBO:0062741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily E member 8","termid":"PBO:0062741"}


id: PBO:0017419
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-adjacent_to","termid":"PBO:0017419"}


id: PBO:0050082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group AT-hook 1 pseudogene 2","termid":"PBO:0050082"}


id: GO:0090573
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription from a RNA polymerase IV promoter.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription repressor complex","termid":"GO:0017053"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"RNA polymerase IV transcription repressor complex","termid":"GO:0090573"}


id: PBO:0040006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL14EP pseudogene 1","termid":"PBO:0040006"}


id: PBO:0026902
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_ribonucleotide_incorporation_on_lagging_strand","termid":"PBO:0026902"}


id: GO:0070172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tooth mineralization, the deposition of calcium salts in tooth structures.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biomineral tissue development","termid":"GO:0070169"},{"relation_name":"is_a","term_name":"regulation of tooth mineralization","termid":"GO:0070170"},{"relation_name":"positively_regulates","term_name":"tooth mineralization","termid":"GO:0034505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tooth mineralization","termid":"GO:0070172"}


id: PBO:0054698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2107","termid":"PBO:0054698"}


id: PBO:0067610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 782, pseudogene","termid":"PBO:0067610"}


id: PR:O94628
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1347.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized methyltransferase C1347.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.09","synonyms":[{"name":"Spom972h-SPBC1347.09","type":"exact"}],"termid":"PR:O94628"}


id: GO:0070257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of mucus from a cell or a tissue.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of mucus secretion","termid":"GO:0070255"},{"relation_name":"positively_regulates","term_name":"mucus secretion","termid":"GO:0070254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of mucus secretion","synonyms":[{"name":"positive regulation of mucus production","type":"exact"}],"termid":"GO:0070257"}


id: PR:O13903
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exosome complex component RRP40 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21321:SF1","OMA:SCHPO00475","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome complex component rrp40 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.12c","secondary_identifiers":["UniProtKB:O13903"],"synonyms":[{"name":"Spom972h-EXOSC3","type":"exact"},{"name":"ribosomal RNA-processing protein 40 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13903"}


id: GO:0005031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with tumor necrosis factor, a proinflammatory cytokine produced by monocytes and macrophages, to initiate a change in cell function.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"death receptor activity","termid":"GO:0005035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"tumor necrosis factor receptor activity","secondary_identifiers":["GO:0005033","GO:0005032"],"synonyms":[{"name":"NGF/TNF (6 C-domain) receptor activity","type":"narrow"},{"name":"TNF receptor activity","type":"exact"},{"name":"TNF receptor activity, type I","type":"narrow"},{"name":"TNF receptor activity, type II","type":"narrow"},{"name":"tumor necrosis factor receptor activity, type I","type":"narrow"},{"name":"tumor necrosis factor receptor activity, type II","type":"narrow"},{"name":"tumor necrosis factor-activated receptor activity","type":"exact"}],"termid":"GO:0005031"}


id: PBO:0028700
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_catabolic_process","termid":"PBO:0028700"}


id: GO:1903919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of actin filament severing.","definition_xrefs":["GOC:TermGenie","GOC:als","PMID:23325791","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of actin filament severing","termid":"GO:1903918"},{"relation_name":"negatively_regulates","term_name":"actin filament severing","termid":"GO:0051014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of actin filament severing","synonyms":[{"name":"down regulation of F-actin severing","type":"exact"},{"name":"down regulation of actin filament severing","type":"exact"},{"name":"down regulation of actin filament severing activity","type":"related"},{"name":"down regulation of barbed-end actin capping/severing activity","type":"related"},{"name":"down-regulation of F-actin severing","type":"exact"},{"name":"down-regulation of actin filament severing","type":"exact"},{"name":"down-regulation of actin filament severing activity","type":"related"},{"name":"down-regulation of barbed-end actin capping/severing activity","type":"related"},{"name":"downregulation of F-actin severing","type":"exact"},{"name":"downregulation of actin filament severing","type":"exact"},{"name":"downregulation of actin filament severing activity","type":"related"},{"name":"downregulation of barbed-end actin capping/severing activity","type":"related"},{"name":"inhibition of F-actin severing","type":"narrow"},{"name":"inhibition of actin filament severing","type":"narrow"},{"name":"inhibition of actin filament severing activity","type":"related"},{"name":"inhibition of barbed-end actin capping/severing activity","type":"related"},{"name":"negative regulation of F-actin severing","type":"exact"},{"name":"negative regulation of actin filament severing activity","type":"related"},{"name":"negative regulation of barbed-end actin capping/severing activity","type":"related"}],"termid":"GO:1903919"}


id: GO:0010581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An process which modulate the frequency, rate or extent of starch biosynthesis, the chemical reactions and pathways resulting in the formation of starch.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucan biosynthetic process","termid":"GO:0010962"},{"relation_name":"is_a","term_name":"regulation of starch metabolic process","termid":"GO:2000904"},{"relation_name":"regulates","term_name":"starch biosynthetic process","termid":"GO:0019252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of starch biosynthetic process","termid":"GO:0010581"}


id: GO:0072728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a Gentian violet stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to Gentian violet","synonyms":[{"name":"response to crystal violet","type":"exact"},{"name":"response to {4-[Bis-(4-dimethylamino-phenyl)-methylene]-cyclohexa-2,5-dienylidene}-dimethyl-ammonium chloride","type":"exact"}],"termid":"GO:0072728"}


id: MOD:01527
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A distinct molecular entity produced from a particular amino acid residue as the result of a fragmentation process.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reporter fragment","termid":"MOD:01519"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residue reporter fragment","termid":"MOD:01527"}


id: GO:0031994
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to insulin-like growth factor I.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insulin-like growth factor binding","termid":"GO:0005520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"insulin-like growth factor I binding","synonyms":[{"name":"IGF-I binding","type":"exact"}],"termid":"GO:0031994"}


id: PBO:0059735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 9","termid":"PBO:0059735"}


id: PBO:0011428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NAD transmembrane transporter (predicted)","termid":"PBO:0011428"}


id: GO:0006385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The extension of an RNA molecule after transcription initiation and promoter clearance at an RNA polymerase III promoter by the addition of ribonucleotides catalyzed by RNA polymerase III.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"transcription elongation by RNA polymerase III","synonyms":[{"name":"RNA elongation from Pol III promoter","type":"exact"},{"name":"RNA polymerase III transcription elongation factor activity","type":"related"},{"name":"transcription elongation by RNA polymerase III promoter","type":"exact"},{"name":"transcription elongation from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0006385"}


id: GO:1903838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mRNA 3'-UTR binding.","definition_xrefs":["GOC:als","PMID:19575011","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA 3'-UTR binding","termid":"GO:1903837"},{"relation_name":"is_a","term_name":"negative regulation of mRNA binding","termid":"GO:1904572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mRNA 3'-UTR binding","synonyms":[{"name":"down regulation of mRNA 3' UTR binding","type":"exact"},{"name":"down regulation of mRNA 3'-UTR binding","type":"exact"},{"name":"down-regulation of mRNA 3' UTR binding","type":"exact"},{"name":"down-regulation of mRNA 3'-UTR binding","type":"exact"},{"name":"downregulation of mRNA 3' UTR binding","type":"exact"},{"name":"downregulation of mRNA 3'-UTR binding","type":"exact"},{"name":"inhibition of mRNA 3' UTR binding","type":"narrow"},{"name":"inhibition of mRNA 3'-UTR binding","type":"narrow"},{"name":"negative regulation of mRNA 3' UTR binding","type":"exact"}],"termid":"GO:1903838"}


id: PBO:0087235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sensor-transducer of the stress-activated PKC1-MPK1 signaling pathway; involved in maintenance of cell wall integrity; involved in response to heat shock and other stressors; regulates 1,3-beta-glucan synthesis; WSC3 has a paralog, WSC2, that arose from the whole genome duplication","termid":"PBO:0087235"}


id: PBO:0076469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transport and golgi organization 2 homolog","termid":"PBO:0076469"}


id: PBO:0067355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 453, pseudogene","termid":"PBO:0067355"}


id: GO:1905664
data:
  {"annotated_genes":["SJAG_00296","SJAG_03631","SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87268,109427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[98209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium ion import across plasma membrane.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:bhm","PMID:17640527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion import","termid":"GO:0090279"},{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transport","termid":"GO:1903169"},{"relation_name":"regulates","term_name":"calcium ion import across plasma membrane","termid":"GO:0098703"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of calcium ion import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905664","terms_by_termid":{"GO:1905665":null,"GO:1905949":null}}


id: FYPO:0003525
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the addition of actin monomers to a filament occurs to a greater extent than normal at one or both cell tips.","definition_xrefs":["PMID:24954052","PomBase:mah","GO:0030041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization at cell tip","termid":"FYPO:0003524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased actin filament polymerization at cell tip","synonyms":[{"name":"increased actin filament polymerisation at cell tip","type":"exact"},{"name":"increased actin filament polymerization at cell end","type":"exact"},{"name":"increased actin filament polymerization at cell tip during mitotic cell cycle","type":"related"},{"name":"increased actin filament polymerization at cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0003525"}


id: GO:0000452
data:
  {"annotated_genes":["SJAG_02350","SJAG_00943","SJAG_02377","SJAG_03410","SJAG_00744"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90188,94849,104148,106255,107408],"is_not":false,"summary":null,"term":"GO:0000452"}]},"cv_name":"biological_process","definition":"The posttranscriptional addition of methyl groups to the 2'-oxygen atom of nucleotide residues in an rRNA molecule during ribosome biogenesis using a snoRNA guide that targets the position of methylation.","definition_xrefs":["GOC:curators","ISBN:1555811337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA 2'-O-methylation","termid":"GO:0000451"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00744":null,"SJAG_00943":null,"SJAG_02350":null,"SJAG_02377":null,"SJAG_03410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0044085","GO:0008150","GO:0042254"],"is_obsolete":false,"name":"snoRNA guided rRNA 2'-O-methylation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"snoRNA guided rRNA 2'-O-ribose methylation","type":"related"}],"termid":"GO:0000452","terms_by_termid":{"GO:0000452":null}}


id: PBO:0072055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 25","termid":"PBO:0072055"}


id: PBO:0047355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 8","termid":"PBO:0047355"}


id: PBO:0000241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma tubulin complex subunit Mod21","termid":"PBO:0000241"}


id: GO:1905446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitochondrial ATP synthesis coupled electron transport.","definition_xrefs":["GO_REF:0000058","GOC:bc","GOC:PARL","GOC:TermGenie","PMID:23707074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of generation of precursor metabolites and energy","termid":"GO:0043467"},{"relation_name":"regulates","term_name":"mitochondrial ATP synthesis coupled electron transport","termid":"GO:0042775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of mitochondrial ATP synthesis coupled electron transport","synonyms":[{"name":"regulation of mitochondrial electron transport","type":"broad"},{"name":"regulation of organelle ATP synthesis coupled electron transport","type":"broad"}],"termid":"GO:1905446"}


id: PBO:0050537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HPN antisense RNA 1","termid":"PBO:0050537"}


id: PBO:0040645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAZ1A antisense RNA 1","termid":"PBO:0040645"}


id: MOD:01000
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one hydrogen atom of an L-tyrosine residue with one bromine atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brominated tyrosine","termid":"MOD:00988"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monobrominated tyrosine","synonyms":[{"name":"Br1Tyr","type":"exact"}],"termid":"MOD:01000"}


id: GO:0010429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a methylated cytosine/unspecified/unspecified trinucleotide.","definition_xrefs":["PMID:17239600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide binding","termid":"GO:0000166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"methyl-CpNpN binding","termid":"GO:0010429"}


id: PBO:0036499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET complex (ER membrane insertion) subunit Get2","termid":"PBO:0036499"}


id: PBO:0048031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fascin actin-bundling protein 2, retinal","termid":"PBO:0048031"}


id: FYPO:0000591
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000595"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transposition is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":1,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal transposition","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"abnormal transposable element transposition","type":"exact"},{"name":"abnormal transposition during mitotic cell cycle","type":"related"},{"name":"abnormal transposition during vegetative growth","type":"exact"},{"name":"transposable element transposition: abnormal","type":"related"}],"termid":"FYPO:0000591","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0000595":null,"FYPO_EXT:0000001":null}}


id: GO:0050206
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-(hydroxyimino)propanoate + acetone = acetone oxime + pyruvate.","definition_xrefs":["RHEA:11624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring nitrogenous groups","termid":"GO:0016769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016769","GO:0016740"],"is_obsolete":false,"name":"oximinotransferase activity","secondary_identifiers":["MetaCyc:OXIMINOTRANSFERASE-RXN","KEGG_REACTION:R03796","GO:0016770","EC:2.6.3.1"],"synonyms":[{"name":"oximase activity","type":"related"},{"name":"oximinotransaminase activity","type":"related"},{"name":"pyruvate-acetone oximinotransferase activity","type":"related"},{"name":"transoximase activity","type":"related"},{"name":"transoximinase activity","type":"related"}],"termid":"GO:0050206"}


id: PBO:0003139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron/zinc ion transporter (predicted)","termid":"PBO:0003139"}


id: PR:Q09844
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23D3.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC domain-containing protein C23D3.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.03c","synonyms":[{"name":"Spom972h-SPAC23D3.03c","type":"exact"}],"termid":"PR:Q09844"}


id: PBO:0064120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 2, transient receptor potential cation channel","termid":"PBO:0064120"}


id: PBO:0034413
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_substance_(obsolete_requires_substance)","termid":"PBO:0034413"}


id: PBO:0028175
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mating_type_switching_resulting_in_duplication_or_deletion_in_mating-type_region","termid":"PBO:0028175"}


id: PBO:0110230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TORC1/2 complex WD repeat protein Wat1/Lst8","termid":"PBO:0110230"}


id: FYPO:0006479
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which cohesin loading is abnormal. Cohesin loading is the topological linking of a cohesin ring complex to chromatin.","definition_xrefs":["GO:0071921","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"},{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin","termid":"FYPO:0001679"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000641"],"is_obsolete":false,"name":"abnormal cohesin loading","synonyms":[{"name":"abnormal cohesin association with chromatin","type":"exact"},{"name":"abnormal cohesin localisation to chromatin","type":"exact"},{"name":"abnormal cohesin localization to chromatin","type":"exact"}],"termid":"FYPO:0006479"}


id: PBO:0060736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 4 pseudogene 1","termid":"PBO:0060736"}


id: GO:1900348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methane biosynthetic process from methylamine.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"methane biosynthetic process from methylamine","termid":"GO:2001128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"regulation of methane biosynthetic process from methylamine","termid":"GO:1900348"}


id: PBO:0027129
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_carbohydrate_metabolism_gene_mRNA_during_meiotic_cell_cycle","termid":"PBO:0027129"}


id: PBO:0061810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 centriole and centriolar satellite protein","termid":"PBO:0061810"}


id: GO:0009834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of inextensible cellulose- and pectin-containing cell walls that are formed between the plasma membrane and primary cell wall after cell expansion is complete. An example of this is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall biogenesis","termid":"GO:0009832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0071554"],"is_obsolete":false,"name":"plant-type secondary cell wall biogenesis","synonyms":[{"name":"cellulose and pectin-containing secondary cell wall biogenesis","type":"exact"},{"name":"secondary cell wall anabolism","type":"broad"},{"name":"secondary cell wall biogenesis","type":"exact"},{"name":"secondary cell wall biosynthetic process","type":"broad"},{"name":"secondary cell wall formation","type":"broad"},{"name":"secondary cell wall synthesis","type":"broad"}],"termid":"GO:0009834"}


id: GO:0044439
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a peroxisome, a small, membrane-bounded organelle that uses dioxygen (O2) to oxidize organic molecules; contains some enzymes that produce and others that degrade hydrogen peroxide (H2O2).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisomal part (obsolete GO:0044439)","synonyms":[{"name":"peroxisome component","type":"exact"}],"termid":"GO:0044439"}


id: PBO:0078266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 2-4","termid":"PBO:0078266"}


id: GO:0090576
data:
  {"annotated_genes":["SJAG_01827","SJAG_00585","SJAG_05339","SJAG_03546","SJAG_03120","SJAG_00421","SJAG_03354","SJAG_02815","SJAG_03007"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112281,91639,99132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000126"},{"annotations":[84254,102975,105185,95637,111435,108708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000127"}]},"cv_name":"cellular_component","definition":"A transcription factor complex that acts at a regulatory region of a gene transcribed by RNA polymerase III.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00421":null,"SJAG_00585":null,"SJAG_01827":null,"SJAG_02815":null,"SJAG_03007":null,"SJAG_03120":null,"SJAG_03354":null,"SJAG_03546":null,"SJAG_05339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RNA polymerase III transcription regulator complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase III transcription factor complex","type":"narrow"}],"termid":"GO:0090576","terms_by_termid":{"GO:0000126":null,"GO:0000127":null}}


id: FYPO:0005473
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate synthase activity using NADH as a cofactor is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"normal glutamate synthase (NADH) activity","synonyms":[{"name":"normal L-glutamate synthase (NADH) activity","type":"exact"},{"name":"normal NADH-dependent glutamate synthase activity","type":"exact"},{"name":"normal NADH: GOGAT activity","type":"related"},{"name":"normal glutamate (reduced nicotinamide adenine dinucleotide) synthase","type":"exact"}],"termid":"FYPO:0005473"}


id: FYPO:0006527
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of hydrolysis of peptide bonds within a protein is decreased. All proteolysis may be affected, or only cleavage of specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein modification","termid":"FYPO:0002498"},{"relation_name":"is_a","term_name":"abnormal proteolysis","termid":"FYPO:0005376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"decreased proteolysis","synonyms":[{"name":"decreased peptidolysis","type":"exact"},{"name":"decreased protein cleavage","type":"related"},{"name":"reduced proteolysis","type":"exact"}],"termid":"FYPO:0006527"}


id: GO:1901056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of trimethylenediamine.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine catabolic process","termid":"GO:0006598"},{"relation_name":"is_a","term_name":"trimethylenediamine metabolic process","termid":"GO:1901055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trimethylenediamine catabolic process","synonyms":[{"name":"trimethylenediamine breakdown","type":"exact"},{"name":"trimethylenediamine catabolism","type":"exact"},{"name":"trimethylenediamine degradation","type":"exact"}],"termid":"GO:1901056"}


id: PBO:0088447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase (CK1 family) Cki1","termid":"PBO:0088447"}


id: GO:0006359
data:
  {"annotated_genes":["SJAG_03931","SJAG_00142","SJAG_01799","SJAG_02898"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72890,87237,104460],"is_not":false,"summary":null,"term":"GO:0006359"},{"annotations":[92454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016480"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transcription mediated by RNA ploymerase III.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"regulates","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_01799":null,"SJAG_02898":null,"SJAG_03931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0006355","GO:0008150"],"is_obsolete":false,"name":"regulation of transcription by RNA polymerase III","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of transcription from Pol III promoter","type":"exact"},{"name":"regulation of transcription from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0006359","terms_by_termid":{"GO:0006359":null,"GO:0016480":null}}


id: GO:0033914
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of successive xylose residues from the non-reducing termini of (1->3)-beta-D-xylans.","definition_xrefs":["EC:3.2.1.72"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylanase activity","termid":"GO:0097599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"xylan 1,3-beta-xylosidase activity","secondary_identifiers":["MetaCyc:3.2.1.72-RXN"],"synonyms":[{"name":"1,3-beta-D-xylan xylohydrolase activity","type":"related"},{"name":"1,3-beta-D-xylosidase, exo-1,3-beta-xylosidase activity","type":"related"},{"name":"beta-1,3'-xylanase activity","type":"related"},{"name":"exo-1,3-beta-xylosidase activity","type":"related"},{"name":"exo-beta-1,3'-xylanase activity","type":"related"}],"termid":"GO:0033914"}


id: PBO:0083227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps with YCR045C; identified by gene-trapping, microarray expression analysis, and genome-wide homology searching","termid":"PBO:0083227"}


id: GO:0004520
data:
  {"annotated_genes":["SJAG_03675","SJAG_01044","SJAG_03994","SJAG_01832","SJAG_00623","SJAG_02556","SJAG_01262","SJAG_04183","SJAG_01648","SJAG_02828","SJAG_01173","SJAG_04752","SJAG_02708","SJAG_02031","SJAG_01948","SJAG_05237","SJAG_05373"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86442],"is_not":false,"summary":null,"term":"GO:0004520"},{"annotations":[114832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990599"},{"annotations":[113185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048257"},{"annotations":[101987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990043"},{"annotations":[100224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990601"},{"annotations":[84463,93194,100225,97232,99261,103814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017108"},{"annotations":[113186,97584,59327,97233,90792,92990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008821"},{"annotations":[97234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990238"},{"annotations":[97235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106332"},{"annotations":[106883,84622,86447,106085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000014"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acid by creating internal breaks.","definition_xrefs":["ISBN:0198547684","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonuclease activity","termid":"GO:0004519"},{"relation_name":"is_a","term_name":"DNA nuclease activity","termid":"GO:0004536"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00623":null,"SJAG_01044":null,"SJAG_01173":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_01832":null,"SJAG_01948":null,"SJAG_02031":null,"SJAG_02556":null,"SJAG_02708":null,"SJAG_02828":null,"SJAG_03675":null,"SJAG_03994":null,"SJAG_04183":null,"SJAG_04752":null,"SJAG_05237":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0016787","GO:0140097","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"DNA endonuclease activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6782204","Reactome:R-HSA-5686440","Reactome:R-HSA-5693584","Reactome:R-HSA-9023941","Reactome:R-HSA-6782224","Reactome:R-HSA-5690988","Reactome:R-HSA-5686657","Reactome:R-HSA-5693608","Reactome:R-HSA-110359","Reactome:R-HSA-5687464"],"synonyms":[{"name":"DNA nicking activity","type":"related"},{"name":"endodeoxyribonuclease activity","type":"exact"},{"name":"endonuclease G activity","type":"related"}],"termid":"GO:0004520","terms_by_termid":{"GO:0000014":null,"GO:0004520":null,"GO:0008821":null,"GO:0017108":null,"GO:0048257":null,"GO:0106332":null,"GO:1990043":null,"GO:1990238":null,"GO:1990599":null,"GO:1990601":null}}


id: FYPO:0002241
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is shaped in the form of a spheroid, has one or more septa, and has a normal volume.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal volume spheroid vegetative cell","termid":"FYPO:0000946"},{"relation_name":"is_a","term_name":"septated spheroid vegetative cell","termid":"FYPO:0005149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001985","FYPO:0000005","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal volume septated spheroid vegetative cell","synonyms":[{"name":"normal volume septated rounded vegetative cell","type":"exact"}],"termid":"FYPO:0002241"}


id: GO:0052234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a lower concentration of environmental oxygen on or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative aerotaxis on or near other organism involved in symbiotic interaction (obsolete GO:0052234)","synonyms":[{"name":"negative aerotaxis on or near other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052234"}


id: PATO:0002206
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A maturity quality inhering to a bearer by virtue of the bearer's being at the point or short after birth.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity","termid":"PATO:0000261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal","termid":"PATO:0002206"}


id: PBO:0056222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member D2","termid":"PBO:0056222"}


id: PBO:0034402
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_downstream_target_(obsolete_has_downstream_target)","termid":"PBO:0034402"}


id: SO:0001062
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Part of a peptide chain which is cleaved off during the formation of the mature protein.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"propeptide_region_of_CDS","termid":"SO:0002250"},{"relation_name":"is_a","term_name":"cleaved_peptide_region","termid":"SO:0100011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"propeptide","secondary_identifiers":["BS:00077","http://en.wikipedia.org/wiki/Propeptide"],"synonyms":[{"name":"INSDC_feature:propeptide","type":"exact"},{"name":"propep","type":"related"}],"termid":"SO:0001062"}


id: PBO:0049773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 9","termid":"PBO:0049773"}


id: GO:0017102
data:
  {"annotated_genes":["SJAG_02263","SJAG_01159","SJAG_03277"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86380,92145,101250],"is_not":false,"summary":null,"term":"GO:0017102"}]},"cv_name":"cellular_component","definition":"A complex consisting of methionyl- and glutamyl-tRNA synthetases. The tRNA synthetases present in the complex bind to their cognate tRNAs more efficiently than they do as monomers.","definition_xrefs":["PMID:11069915","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01159":null,"SJAG_02263":null,"SJAG_03277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"methionyl glutamyl tRNA synthetase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0017102","terms_by_termid":{"GO:0017102":null}}


id: GO:0071039
data:
  {"annotated_genes":["SJAG_03745","SJAG_01064","SJAG_03939","SJAG_01830","SJAG_00701","SJAG_03984","SJAG_02622","SJAG_04360"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88291,95833,99054,107921,108816,109331,111446,114179],"is_not":false,"summary":null,"term":"GO:0071039"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the nucleus and resulting in the breakdown of a cryptic unstable transcript (CUT), initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target CUT.","definition_xrefs":["PMID:16973436","PMID:15935759","PMID:16973437","PMID:18007593","PMID:18591258","GOC:dgf","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"},{"relation_name":"is_a","term_name":"CUT catabolic process","termid":"GO:0071034"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00701":null,"SJAG_01064":null,"SJAG_01830":null,"SJAG_02622":null,"SJAG_03745":null,"SJAG_03939":null,"SJAG_03984":null,"SJAG_04360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear polyadenylation-dependent CUT catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear poly(A)-dependent CUT catabolic process","type":"related"}],"termid":"GO:0071039","terms_by_termid":{"GO:0071039":null}}


id: PR:Q9P7I6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC24B10.20 gene.","definition_xrefs":["UniProtKB:Q9P7I6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C24B10.20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.20","synonyms":[{"name":"Spom972h-SPCC24B10.20","type":"exact"}],"termid":"PR:Q9P7I6"}


id: PBO:0042927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorionic gonadotropin subunit beta 7","termid":"PBO:0042927"}


id: PBO:0088089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose pyrophosphorylase (UGPase); catalyses the reversible formation of UDP-Glc from glucose 1-phosphate and UTP, involved in a wide variety of metabolic pathways, expression modulated by Pho85p through Pho4p; involved in PKA-mediated oxidative stress resistance and long-term survival in stationary phase; UGP1 has a paralog, YHL012W, that arose from the whole genome duplication","termid":"PBO:0088089"}


id: SO:0001598
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant within the transcript that changes the structure of the translational product.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_variant","termid":"SO:0001564"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translational_product_structure_variant","synonyms":[{"name":"translational product structure variant","type":"exact"}],"termid":"SO:0001598"}


id: PBO:0090668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR domain protein, DNAJC7 family","termid":"PBO:0090668"}


id: GO:0018396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The hydroxylation of peptidyl-lysine to peptidyl-4-hydroxy-L-lysine.","definition_xrefs":["RESID:AA0235"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine hydroxylation to 4-hydroxy-L-lysine (obsolete GO:0018396)","termid":"GO:0018396"}


id: GO:0071267
data:
  {"annotated_genes":["SJAG_00309","SJAG_02293","SJAG_03881","SJAG_00419","SJAG_01404","SJAG_03614","SJAG_04953","SJAG_02689"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91627,96062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990355"},{"annotations":[95074,103058,85841,88704,96716,108491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[103059,95075,88705],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019284"}]},"cv_name":"biological_process","definition":"Any process that generates L-methionine from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid salvage","termid":"GO:0043102"},{"relation_name":"is_a","term_name":"L-methionine biosynthetic process","termid":"GO:0071265"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00309":null,"SJAG_00419":null,"SJAG_01404":null,"SJAG_02293":null,"SJAG_02689":null,"SJAG_03614":null,"SJAG_03881":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006520","GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-methionine salvage","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071267","terms_by_termid":{"GO:0019284":null,"GO:0019509":null,"GO:1990355":null}}


id: GO:0008898
data:
  {"annotated_genes":["SJAG_04425"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94589],"is_not":false,"summary":null,"term":"GO:0008898"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + L-homocysteine = S-adenosyl-L-homocysteine + L-methionine.","definition_xrefs":["GOC:dph","GOC:BHF","EC:2.1.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"S-adenosylmethionine-homocysteine S-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN","RHEA:21820"],"synonyms":[{"name":"L-homocysteine S-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:L-homocysteine S-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:L-homocysteine methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine homocysteine transmethylase activity","type":"related"},{"name":"S-adenosylmethionine-homocysteine transmethylase activity","type":"related"},{"name":"S-adenosylmethionine:homocysteine methyltransferase activity","type":"related"},{"name":"adenosylmethionine transmethylase activity","type":"related"},{"name":"adenosylmethionine:homocysteine methyltransferase activity","type":"related"},{"name":"homocysteine methyltransferase activity","type":"related"},{"name":"homocysteine transmethylase activity","type":"related"}],"termid":"GO:0008898","terms_by_termid":{"GO:0008898":null}}


id: FYPO:0006477
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115394,115188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"},{"annotations":[115571,115570,115572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000324"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the metaphase/anaphase transition of the mitotic cell cycle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase transition","termid":"FYPO:0005275"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01330":null,"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":4,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic metaphase/anaphase transition","references_by_uniquename":{"PMID:21802294":null,"PMID:23786411":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01956","SJAG_01330","SJAG_03351","SJAG_03575"],"single_locus_genotype_uniquenames":["mad2delta","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal cell cycle passage through mitotic metaphase-anaphase transition","type":"exact"},{"name":"abnormal cell cycle progression through the metaphase/anaphase transition","type":"exact"},{"name":"abnormal metaphase/anaphase transition during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle metaphase/anaphase transition","type":"exact"},{"name":"abnormal mitotic metaphase/anaphase cell cycle phase transition","type":"exact"},{"name":"abnormal mitotic metaphase/anaphase transition during vegetative growth","type":"exact"},{"name":"abnormal onset of mitotic anaphase","type":"related"}],"termid":"FYPO:0006477","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYPO:0000324":null,"FYPO:0004318":null}}


id: PBO:0065176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prominin 2","termid":"PBO:0065176"}


id: SO:0000959
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, single-stranded, linear DNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"linear","termid":"SO:0000987"},{"relation_name":"is_a","term_name":"single_stranded_DNA_chromosome","termid":"SO:0000956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear_single_stranded_DNA_chromosome","synonyms":[{"name":"linear single stranded DNA chromosome","type":"exact"}],"termid":"SO:0000959"}


id: PATO:0000257
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000257 absolute taste_acuity (obsolete PATO:0000257)","termid":"PATO:0000257"}


id: PBO:0108574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo Sfi1 Interactor","termid":"PBO:0108574"}


id: GO:2000774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular senescence.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"regulation of cellular senescence","termid":"GO:2000772"},{"relation_name":"positively_regulates","term_name":"cellular senescence","termid":"GO:0090398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular senescence","termid":"GO:2000774"}


id: PBO:0049223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRK5 intronic transcript 1","termid":"PBO:0049223"}


id: PBO:0087055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L26B; binds to 5.8S rRNA; non-essential even when paralog is also deleted; deletion has minimal affections on ribosome biosynthesis; homologous to mammalian ribosomal protein L26 and bacterial L24; RPL26B has a paralog, RPL26A, that arose from the whole genome duplication","termid":"PBO:0087055"}


id: GO:0070135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving beta-1,2-linked oligomannosides, which are found in fungal cell wall phosphopeptidomannan and phospholipomannan.","definition_xrefs":["GOC:mah","PMID:18234669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannan metabolic process","termid":"GO:0010412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"beta-1,2-oligomannoside metabolic process","synonyms":[{"name":"beta-1,2-oligomannoside metabolism","type":"exact"}],"termid":"GO:0070135"}


id: PBO:0086580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; deletion mutant has no detectable phenotype","termid":"PBO:0086580"}


id: PBO:0073879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 10 member 6","termid":"PBO:0073879"}


id: GO:0008930
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methylthioadenosine + H2O = adenine + 5-methylthio-D-ribose.","definition_xrefs":["EC:3.2.2.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleosidase activity","termid":"GO:0008477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"methylthioadenosine nucleosidase activity","secondary_identifiers":["RHEA:13617","MetaCyc:METHYLTHIOADENOSINE-NUCLEOSIDASE-RXN"],"synonyms":[{"name":"5'-methylthioadenosine nucleosidase activity","type":"related"},{"name":"MTA nucleosidase activity","type":"related"},{"name":"MeSAdo nucleosidase activity","type":"related"},{"name":"S-methyl-5'-thioadenosine adeninehyrolase activity","type":"related"},{"name":"methylthioadenosine methylthioribohydrolase activity","type":"related"}],"termid":"GO:0008930"}


id: GO:0071403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a high density lipoprotein particle stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipoprotein particle stimulus","termid":"GO:0071402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to high density lipoprotein particle stimulus","secondary_identifiers":["GO:0055099"],"synonyms":[{"name":"cellular response to high-density lipoprotein particle stimulus","type":"exact"},{"name":"response to high density lipoprotein particle","type":"broad"},{"name":"response to high density lipoprotein particle stimulus","type":"broad"}],"termid":"GO:0071403"}


id: PBO:0083954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma-tubulin small complex (gamma-TuSC) receptor; recruits the gamma-TuSC complex to the cytoplasmic side of the SPB, connecting nuclear microtubules to the SPB; involved in astral microtubule formation, stabilization, and with Stu2p, anchoring astral MTs at the cytoplasmic face of the SPB, and regulating plus-end MT dynamics; regulated by Cdc5 kinase","termid":"PBO:0083954"}


id: GO:0034171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 11 signaling pathway.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"toll-like receptor 11 signaling pathway","termid":"GO:0034170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of toll-like receptor 11 signaling pathway","synonyms":[{"name":"regulation of TLR11 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 11 signalling pathway","type":"exact"}],"termid":"GO:0034171"}


id: GO:0098700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The active transport of neurotransmitters into a synaptic vesicle. This import is fuelled by an electrochemical gradient across the vesicle membrane, established by the action of proton pumps.","definition_xrefs":["PMID:10099709","PMID:15217342","GOC:pad","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter transport","termid":"GO:0006836"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"part_of","term_name":"synaptic vesicle cycle","termid":"GO:0099504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"neurotransmitter loading into synaptic vesicle","synonyms":[{"name":"neurotransmitter import into synaptic vesicle","type":"exact"},{"name":"neurotransmitter uptake into synaptic vesicle","type":"exact"},{"name":"synaptic vesicle neurotransmitter loading","type":"exact"}],"termid":"GO:0098700"}


id: GO:0106400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A mechanism of homologous recombination and DNA repair in which transcript RNA is used as a template for DSB repair.","definition_xrefs":["PMID:25186730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair via homologous recombination","termid":"GO:0000724"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"double-strand break repair via transcription-associated homologous recombination","termid":"GO:0106400"}


id: GO:0090324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the phosphorylation of ADP to ATP that accompanies the oxidation of a metabolite through the operation of the respiratory chain. Oxidation of compounds establishes a proton gradient across the membrane, providing the energy for ATP synthesis.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of oxidative phosphorylation","termid":"GO:0002082"},{"relation_name":"is_a","term_name":"negative regulation of cellular respiration","termid":"GO:1901856"},{"relation_name":"negatively_regulates","term_name":"oxidative phosphorylation","termid":"GO:0006119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"negative regulation of oxidative phosphorylation","termid":"GO:0090324"}


id: SO:0001747
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence that in the normal state of the chromosome corresponds to an unfolded, un-complexed stretch of double-stranded DNA.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"open_chromatin_region","synonyms":[{"name":"open chromatin region","type":"exact"}],"termid":"SO:0001747"}


id: GO:0016414
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an octanoyl group to an oxygen atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"},{"relation_name":"is_a","term_name":"octanoyltransferase activity","termid":"GO:0016415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"O-octanoyltransferase activity","termid":"GO:0016414"}


id: PR:O43010
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- myr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycylpeptide N-tetradecanoyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.11","synonyms":[{"name":"NMT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-myr1","type":"exact"},{"name":"myristoyl-CoA:protein N-myristoyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"peptide N-myristoyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43010"}


id: PBO:0036261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAMP complex ATP-dependent RNA helicase subunit Mtr4","termid":"PBO:0036261"}


id: PBO:0001680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein, splicing factor Cdc5","termid":"PBO:0001680"}


id: GO:0030150
data:
  {"annotated_genes":["SJAG_04218","SJAG_02917","SJAG_01684","SJAG_01442","SJAG_02077","SJAG_05259","SJAG_04432","SJAG_03358","SJAG_03415","SJAG_01120","SJAG_04336","SJAG_01615","SJAG_04996","SJAG_01879","SJAG_03560","SJAG_03502","SJAG_03515","SJAG_04014","SJAG_00373","SJAG_01597","SJAG_00564"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84401,85603,86951,90576,92950,95302,95487,95598,96379,98758,99345,101232,102221,103563,103621,103644,105929,107862,111300,112862,113323],"is_not":false,"summary":null,"term":"GO:0030150"}]},"cv_name":"biological_process","definition":"The import of proteins across the outer and inner mitochondrial membranes into the matrix. Unfolded proteins enter the mitochondrial matrix with a chaperone protein; the information required to target the precursor protein from the cytosol to the mitochondrial matrix is contained within its N-terminal matrix-targeting sequence. Translocation of precursors to the matrix occurs at the rare sites where the outer and inner membranes are close together.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transmembrane import into intracellular organelle","termid":"GO:0044743"},{"relation_name":"is_a","term_name":"establishment of protein localization to mitochondrion","termid":"GO:0072655"},{"relation_name":"is_a","term_name":"import into the mitochondrion","termid":"GO:0170036"},{"relation_name":"part_of","term_name":"protein targeting to mitochondrion","termid":"GO:0006626"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00373":null,"SJAG_00564":null,"SJAG_01120":null,"SJAG_01442":null,"SJAG_01597":null,"SJAG_01615":null,"SJAG_01684":null,"SJAG_01879":null,"SJAG_02077":null,"SJAG_02917":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_04014":null,"SJAG_04218":null,"SJAG_04336":null,"SJAG_04432":null,"SJAG_04996":null,"SJAG_05259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150","GO:0006605"],"is_obsolete":false,"name":"protein import into mitochondrial matrix","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial matrix protein import","type":"exact"},{"name":"mitochondrial translocation","type":"broad"},{"name":"protein transport into mitochondrial matrix","type":"exact"}],"termid":"GO:0030150","terms_by_termid":{"GO:0030150":null}}


id: PBO:0051435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-17 (pseudogene)","termid":"PBO:0051435"}


id: PBO:0044912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol O-acyltransferase 1","termid":"PBO:0044912"}


id: SO:0001641
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a long, intervening non-coding RNA.","definition_xrefs":["PMID:23463798","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA_gene","termid":"SO:0002127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lincRNA_gene","synonyms":[{"name":"lincRNA gene","type":"exact"}],"termid":"SO:0001641"}


id: PBO:0003899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of mRNA decapping Edc3 (predicted)","termid":"PBO:0003899"}


id: GO:0046845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Allocation of a set number of cells to each primary branch in an open tracheal system, prior to the onset of cell migration. This establishes different domains of cells within the tracheal placode.","definition_xrefs":["GOC:mtg_sensu","PMID:10684581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branched duct epithelial cell fate determination, open tracheal system","synonyms":[{"name":"branch cell fate determination","type":"broad"}],"termid":"GO:0046845"}


id: PBO:0041617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium binding protein 2","termid":"PBO:0041617"}


id: GO:0001684
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete axonemal dynein intermediate chain (obsolete GO:0001684)","synonyms":[{"name":"axonemal dynein intermediate chain","type":"exact"}],"termid":"GO:0001684"}


id: PBO:0077842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPD52 like 1","termid":"PBO:0077842"}


id: GO:0039668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The uptake of a virus or viral genetic material into a host cell which occurs through retraction of the virion-bound pilus, followed by entry of the viral genome into the host cell through the pilus basal pore. Filamentous bacteriophages absorb to the tip of the F-pili and can enter the bacterial cell in this way.","definition_xrefs":["GOC:jl","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete viral entry into host cell via pilus basal pore (obsolete GO:0039668)","synonyms":[{"name":"filamentous viral entry into host cell via pilus retraction","type":"narrow"}],"termid":"GO:0039668"}


id: GO:0030194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood coagulation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood coagulation","termid":"GO:0030193"},{"relation_name":"is_a","term_name":"positive regulation of coagulation","termid":"GO:0050820"},{"relation_name":"is_a","term_name":"positive regulation of wound healing","termid":"GO:0090303"},{"relation_name":"is_a","term_name":"positive regulation of hemostasis","termid":"GO:1900048"},{"relation_name":"positively_regulates","term_name":"blood coagulation","termid":"GO:0007596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood coagulation","synonyms":[{"name":"activation of blood coagulation","type":"narrow"},{"name":"stimulation of blood coagulation","type":"narrow"},{"name":"up regulation of blood coagulation","type":"exact"},{"name":"up-regulation of blood coagulation","type":"exact"},{"name":"upregulation of blood coagulation","type":"exact"}],"termid":"GO:0030194"}


id: FYPO:0004291
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding at GT dinucleotide microsatellite repeat regions by a gene product is decreased, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased microsatellite DNA binding","termid":"FYPO:0004290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000653"],"is_obsolete":false,"name":"decreased GT microsatellite DNA binding","synonyms":[{"name":"decreased GT dinucleotide microsatellite repeat binding","type":"exact"},{"name":"decreased microsatellite (GT) DNA binding","type":"exact"},{"name":"reduced GT microsatellite DNA binding","type":"exact"}],"termid":"FYPO:0004291"}


id: FYPO:0001569
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-ornithine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular ornithine level","synonyms":[{"name":"increased cellular L-ornithine level","type":"exact"},{"name":"increased cellular ornithine level during mitotic cell cycle","type":"related"},{"name":"increased cellular ornithine level during vegetative growth","type":"exact"},{"name":"increased ornithine accumulation","type":"related"}],"termid":"FYPO:0001569"}


id: PR:O14073
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPACUNK4.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl aminopeptidase C2E11.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPACUNK4.08","synonyms":[{"name":"Spom972h-SPACUNK4.08","type":"exact"}],"termid":"PR:O14073"}


id: GO:0090185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of kidney development. Kidney development is the process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:tb","GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of kidney development","termid":"GO:0090183"},{"relation_name":"negatively_regulates","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of kidney development","synonyms":[{"name":"negative regulation of nephrogenesis","type":"related"}],"termid":"GO:0090185"}


id: PBO:0080953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger BED-type containing 6","termid":"PBO:0080953"}


id: PBO:0068939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 182, pseudogene","termid":"PBO:0068939"}


id: GO:0046622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of growth of an organ of an organism.","definition_xrefs":["GOC:tb","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organ growth","termid":"GO:0046620"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"organ growth","termid":"GO:0035265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of organ growth","termid":"GO:0046622"}


id: PBO:0079440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tu translation elongation factor, mitochondrial pseudogene 1","termid":"PBO:0079440"}


id: FYPO:0007452
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the plus ends end of microtubules is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:15809031","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to microtubule end during mitotic interphase","termid":"FYPO:0005813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000138","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to microtubule plus-end","synonyms":[{"name":"normal protein localisation to microtubule plus-end","type":"exact"},{"name":"normal protein localization to microtubule plus-end during mitotic cell cycle","type":"related"},{"name":"normal protein localization to microtubule plus-end during vegetative growth","type":"exact"}],"termid":"FYPO:0007452"}


id: CHEBI:192760
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","definition":"A benzoate ester resulting from the formal condensation of the carboxy group of vanillic acid with the hydroxy group of cyclohexanol.","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mochimganine","termid":"CHEBI:192760"}


id: GO:1904081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any positive regulation of transcription from RNA polymerase II promoter that is involved in neuron differentiation.","definition_xrefs":["PMID:24353061","GOC:kmv","GOC:TermGenie","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in neuron differentiation (obsolete GO:1904081)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter involved in neuron differentiation","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter involved in neuron differentiation","type":"exact"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter involved in neuron differentiation","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter involved in neuron differentiation","type":"related"},{"name":"positive regulation of transcription from Pol II promoter involved in neuron differentiation","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter, global involved in neuron differentiation","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter involved in neuron differentiation","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter involved in neuron differentiation","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter involved in neuron differentiation","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter involved in neuron differentiation","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter involved in neuron differentiation","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter involved in neuron differentiation","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter involved in neuron differentiation","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter involved in neuron differentiation","type":"exact"}],"termid":"GO:1904081"}


id: PATO:0000331
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color quality inhering in a bearer by virtue of the bearer's being altered or spoiled in color.","definition_xrefs":["Dictionary.com:Dictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color pattern","termid":"PATO:0000019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discolored","termid":"PATO:0000331"}


id: GO:0014896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The muscle system process that results in enlargement or overgrowth of all or part of a muscle organ due to an increase in the size of its muscle cells. Physiological hypertrophy is a normal process during development (it stops in cardiac muscle after adolescence) and can also be brought on in response to demand. In athletes cardiac and skeletal muscles undergo hypertrophy stimulated by increasing muscle activity on exercise. Smooth muscle cells in the uterus undergo hypertrophy during pregnancy.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle system process","termid":"GO:0003012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle hypertrophy","secondary_identifiers":["Wikipedia:Muscle_hypertrophy"],"termid":"GO:0014896"}


id: FYECO:0000149
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 1-deoxynojirimycin (1-DNJ) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 1-DNJ","synonyms":[{"name":"1-deoxynojirimycin added","type":"exact"},{"name":"DNJ added","type":"exact"},{"name":"deoxynojirimycin added","type":"exact"}],"termid":"FYECO:0000149"}


id: PBO:0063618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3","termid":"PBO:0063618"}


id: GO:0120221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in maintaining the planar beating pattern of ciliary movement pattern. Connection between the outer doublets and the central pair via the radial spokes constrains ciliary movement to the planar beating pattern. Cilia that lack this connection, such as those in the embryonic node or Kupfer's vesicle, display radial movement.","definition_xrefs":["GOC:krc","PMID:26506310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cilium movement","termid":"GO:0003352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of ciliary planar beating movement pattern","termid":"GO:0120221"}


id: SO:0000848
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The long terminal repeat found at the ends of the sequence to be inserted into the host genome.","direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_component","termid":"SO:0000840"},{"relation_name":"part_of","term_name":"long_terminal_repeat","termid":"SO:0000286"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LTR_component","synonyms":[{"name":"LTR component","type":"exact"},{"name":"long term repeat component","type":"exact"}],"termid":"SO:0000848"}


id: GO:0015260
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete isethionate channel activity (obsolete GO:0015260)","synonyms":[{"name":"isethionate channel activity","type":"exact"}],"termid":"GO:0015260"}


id: GO:0048468
data:
  {"annotated_genes":["SJAG_01662","SJAG_04781","SJAG_04275","SJAG_00405","SJAG_04140","SJAG_04853","SJAG_04470","SJAG_03688","SJAG_03536","SJAG_03250","SJAG_02320","SJAG_04922","SJAG_00514","SJAG_03587","SJAG_03746","SJAG_00821","SJAG_04868","SJAG_04483","SJAG_04236","SJAG_04184","SJAG_02392","SJAG_04271","SJAG_03090","SJAG_04859","SJAG_00114","SJAG_02529","SJAG_04080","SJAG_00486","SJAG_05309","SJAG_04901","SJAG_00826","SJAG_00971","SJAG_00993","SJAG_03581","SJAG_01321","SJAG_02736","SJAG_04010","SJAG_02712","SJAG_03483","SJAG_02248","SJAG_02169","SJAG_00663","SJAG_00974","SJAG_02241","SJAG_01531","SJAG_04615","SJAG_01769","SJAG_03557","SJAG_03057","SJAG_03013","SJAG_01483","SJAG_03915","SJAG_04238"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91907,85929,90636],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0051519"},{"annotations":[103773,106168,107571,114599,93003,108770,100192,109999,101167,92585,92935,96785,91430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030437"},{"annotations":[90522],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[113852,86308,84280,84770,87817],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[105351],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[113862,100235,113853,110148,105127],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[87548,93649,106169,101018,105352],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031321"},{"annotations":[103438,95960,106170,113006,94885,97768,87341,91431,114600,93650,95890,95891,115082,101334,114898,93609,110000],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[110001,93610,95893,92936,103774,100193,95892,88338,98983,102880],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[107259],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[86783],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0051517"},{"annotations":[98353],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[86785],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[88233],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[102057,112041,96178,90563,95894,95895],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The cellular developmental process in which a specific cell progresses from an immature to a mature state. Cell development start once cell commitment has taken place.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_00993":null,"SJAG_01321":null,"SJAG_01483":null,"SJAG_01531":null,"SJAG_01662":null,"SJAG_01769":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02392":null,"SJAG_02529":null,"SJAG_02712":null,"SJAG_02736":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03090":null,"SJAG_03250":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03557":null,"SJAG_03581":null,"SJAG_03587":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04140":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04853":null,"SJAG_04859":null,"SJAG_04868":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell development","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"terminal differentiation","type":"related"}],"termid":"GO:0048468","terms_by_termid":{"GO:0030437":null,"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0051517":null,"GO:0051519":null,"GO:0070583":null,"GO:0070591":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: PBO:0064456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-glucosyltransferase 2","termid":"PBO:0064456"}


id: PBO:0027084
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_mitotic_spindle_midzone_during_anaphase_B","termid":"PBO:0027084"}


id: GO:0008873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-gluconate + NADP+ = 2-dehydro-D-gluconate + NADPH + H+.","definition_xrefs":["EC:1.1.1.215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gluconate dehydrogenase activity","termid":"GO:0008875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"gluconate 2-dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.215-RXN","RHEA:16653"],"synonyms":[{"name":"2-keto-D-gluconate reductase activity","type":"related"},{"name":"2-ketogluconate reductase activity","type":"related"}],"termid":"GO:0008873"}


id: PBO:0016093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome segregation protein Csi1","termid":"PBO:0016093"}


id: GO:0045178
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a cell situated near the base. For example, in a polarized epithelial cell, the basal surface rests on the basal lamina that separates the epithelium from other tissue.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basal part of cell","termid":"GO:0045178"}


id: PBO:0044681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage inducible transcript 4","termid":"PBO:0044681"}


id: GO:0021789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branchiomotor neuron growth cone in the branchial arch mesenchyme is directed to a specific target site in the branchial arch mesenchyme. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx.","definition_xrefs":["GOC:dph","GOC:jid","PMID:14699587","GOC:cls","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchiomotor neuron axon guidance","termid":"GO:0021785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branchiomotor neuron axon guidance in branchial arch mesenchyme","termid":"GO:0021789"}


id: PBO:0058473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5581","termid":"PBO:0058473"}


id: PBO:0081853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 786","termid":"PBO:0081853"}


id: MOD:01632
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-arginine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-arginine removal","termid":"MOD:01632"}


id: GO:1902991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amyloid precursor protein catabolic process.","definition_xrefs":["PMID:24499793","GOC:PARL","GOC:rl","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"regulates","term_name":"amyloid precursor protein catabolic process","termid":"GO:0042987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amyloid precursor protein catabolic process","synonyms":[{"name":"regulation of APP catabolic process","type":"exact"},{"name":"regulation of APP catabolism","type":"exact"},{"name":"regulation of amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of amyloid precursor protein degradation","type":"exact"}],"termid":"GO:1902991"}


id: GO:1990113
data:
  {"annotated_genes":["SJAG_04093","SJAG_04012"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102530,114123],"is_not":false,"summary":null,"term":"GO:1990113"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the eukaryotic RNA polymerase I complex.","definition_xrefs":["PMID:23459708","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04012":null,"SJAG_04093":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"RNA polymerase I assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA-directed RNA polymerase I complex assembly","type":"exact"},{"name":"RNA Polymerase I complex assembly","type":"exact"}],"termid":"GO:1990113","terms_by_termid":{"GO:1990113":null}}


id: PBO:0074551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 4","termid":"PBO:0074551"}


id: GO:0036500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the endoplasmic reticulum membrane stress sensor ATF6 (activating transcription factor 6). Begins with activation of ATF6 in response to endoplasmic reticulum (ER) stress, and ends with regulation of a downstream cellular process, e.g. transcription. Under conditions of endoplasmic reticulum stress, ATF6 translocates to the Golgi where it is processed by proteases to release a cytoplasmic domain (ATF6f), which operates as a transcriptional activator of many genes required to restore folding capacity.","definition_xrefs":["PMID:22013210","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER-nucleus signaling pathway","termid":"GO:0006984"},{"relation_name":"is_a","term_name":"endoplasmic reticulum unfolded protein response","termid":"GO:0030968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"ATF6-mediated unfolded protein response","synonyms":[{"name":"ATF6 branch of UPR","type":"exact"},{"name":"ATF6 signal transduction pathway","type":"broad"},{"name":"ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"ATF6-alpha UPR branch","type":"narrow"},{"name":"ATF6-beta UPR branch","type":"narrow"},{"name":"UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"}],"termid":"GO:0036500"}


id: PBO:0000044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase publication types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paper","termid":"PBO:0000044"}


id: PBO:0033830
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Overexpression causing Deoxyglucose Resistance","termid":"PBO:0033830"}


id: GO:0050912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in the perception of taste in which a gustatory chemical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of chemical stimulus involved in sensory perception","termid":"GO:0050907"},{"relation_name":"part_of","term_name":"sensory perception of taste","termid":"GO:0050909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of chemical stimulus involved in sensory perception of taste","synonyms":[{"name":"perception of taste, detection of chemical stimulus","type":"exact"},{"name":"perception of taste, sensory detection of chemical stimulus","type":"exact"},{"name":"perception of taste, sensory transduction of chemical stimulus","type":"exact"},{"name":"sensory detection of chemical stimulus during perception of taste","type":"exact"},{"name":"sensory detection of taste","type":"exact"},{"name":"sensory transduction of chemical stimulus during perception of taste","type":"exact"},{"name":"sensory transduction of taste","type":"exact"},{"name":"taste perception","type":"broad"}],"termid":"GO:0050912"}


id: MOD:01774
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-octanoyl-L-lysine.","definition_xrefs":["PubMed:12591875","PubMed:2215217","RESID:AA0527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"octanoylated residue","termid":"MOD:00666"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N6-octanoyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(octanoylamino)hexanoic acid","type":"exact"},{"name":"N(zeta)-octanoyllysine","type":"exact"},{"name":"N6-(1-oxooctyl)-L-lysine","type":"exact"},{"name":"N6-octanoyl-L-lysine","type":"exact"},{"name":"epsilon-octanoyllysine","type":"exact"}],"termid":"MOD:01774"}


id: GO:1903253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of hercynylcysteine sulfoxide.","definition_xrefs":["GOC:TermGenie","PMID:24828577","GO_REF:0000068"],"gene_count":0,"genotype_count":0,"name":"obsolete hercynylcysteine sulfoxide biosynthetic process (obsolete GO:1903253)","synonyms":[{"name":"hercynylcysteine sulfoxide anabolism","type":"exact"},{"name":"hercynylcysteine sulfoxide biosynthesis","type":"exact"},{"name":"hercynylcysteine sulfoxide formation","type":"exact"},{"name":"hercynylcysteine sulfoxide synthesis","type":"exact"}],"termid":"GO:1903253"}


id: PBO:0074418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 17","termid":"PBO:0074418"}


id: PBO:0003129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh4 (predicted)","termid":"PBO:0003129"}


id: PBO:0029128
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_Golgi_apparatus_morphology","termid":"PBO:0029128"}


id: PR:O94297
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03764","PRO:DNx","PANTHER:PTHR11712:SF23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.13c","secondary_identifiers":["UniProtKB:O94297"],"synonyms":[{"name":"Spom972h-OXSM","type":"exact"},{"name":"beta-ketoacyl-ACP synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mtKAS (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94297"}


id: PBO:0029475
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-swollen_septated_spheroid_vegetative_cell","termid":"PBO:0029475"}


id: PBO:0059970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 15","termid":"PBO:0059970"}


id: PBO:0053381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 308","termid":"PBO:0053381"}


id: PBO:0048110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-L-fucosidase 2","termid":"PBO:0048110"}


id: PBO:0089298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal cell surface protein, Kre9/Knh1 family, Adg2","termid":"PBO:0089298"}


id: GO:0052892
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aromatic (S)-hydroxynitrile = an aromatic aldehyde + cyanide.","definition_xrefs":["RHEA:54660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(S)-hydroxynitrile lyase activity","termid":"GO:0047606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aromatic (S)-hydroxynitrile lyase activity","secondary_identifiers":["MetaCyc:RXN-11732","KEGG_REACTION:R09359"],"termid":"GO:0052892"}


id: GO:0039623
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=25 symmetry. The T=25 capsid is composed of 12 pentameric and 240 hexameric capsomeres.","definition_xrefs":["VZ:810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=25 icosahedral viral capsid","termid":"GO:0039623"}


id: PBO:0068457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 33, pseudogene","termid":"PBO:0068457"}


id: PATO:0000136
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphological quality pertaining to the degree to which an object contains an opening, aperture, orifice or vent.","definition_xrefs":["PATOC:CJM","PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphology","termid":"PATO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"closure","termid":"PATO:0000136"}


id: GO:0046418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving nopaline, (N-(I-carboxy-4-guanidinobutyl)glutamic acid), a rare amino-acid derivative.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nopaline metabolic process (obsolete GO:0046418)","synonyms":[{"name":"nopaline metabolism","type":"exact"}],"termid":"GO:0046418"}


id: PATO:0000517
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000517 abiotic stress sensitivity value (obsolete PATO:0000517)","termid":"PATO:0000517"}


id: PBO:0065096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase AMP-activated non-catalytic subunit gamma 3","termid":"PBO:0065096"}


id: PBO:0000450
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses genes involved in iron uptake","termid":"PBO:0000450"}


id: GO:1901825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving zeaxanthin.","definition_xrefs":["GOC:yaf","UniPathway:UPA00843","MetaCyc:PWY-5944","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthophyll metabolic process","termid":"GO:0016122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"zeaxanthin metabolic process","synonyms":[{"name":"zeaxanthin metabolism","type":"exact"}],"termid":"GO:1901825"}


id: PBO:0069521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 790, pseudogene","termid":"PBO:0069521"}


id: GO:0031585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the activity of the inositol 1,4,5-trisphosphate-sensitive calcium-release channel.","definition_xrefs":["GOC:mah","GOC:dph","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of release of sequestered calcium ion into cytosol","termid":"GO:0051279"},{"relation_name":"is_a","term_name":"regulation of calcium ion transmembrane transporter activity","termid":"GO:1901019"},{"relation_name":"is_a","term_name":"regulation of cation channel activity","termid":"GO:2001257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity","synonyms":[{"name":"regulation of IP3 receptor activity","type":"exact"},{"name":"regulation of inositol-1,4,5-triphosphate receptor activity","type":"exact"}],"termid":"GO:0031585"}


id: FYPO:0007235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at early replication origins (i.e. origins that normally fire early in S phase) is decreased.","definition_xrefs":["PMID:22279046","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin at replication origin","termid":"FYPO:0003950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to chromatin at early replication origin","synonyms":[{"name":"decreased protein localisation to chromatin at early replication origin","type":"exact"},{"name":"decreased protein localization to chromatin at early origin","type":"exact"},{"name":"decreased protein localization to chromatin at early replication origin during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to early replication origin during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at early replication origin","type":"exact"}],"termid":"FYPO:0007235"}


id: GO:0019866
data:
  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id: PBO:0061834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-oxoglutarate and iron dependent oxygenase domain containing 2","termid":"PBO:0061834"}


id: PBO:0048991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glypican 3","termid":"PBO:0048991"}


id: SO:0000737
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a mitochondria.","direct_ancestors":[{"relation_name":"is_a","term_name":"organelle_sequence","termid":"SO:0000736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial_sequence","synonyms":[{"name":"mitochondrial sequence","type":"exact"}],"termid":"SO:0000737"}


id: PBO:0065301
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 8","termid":"PBO:0065301"}


id: PBO:0086583
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; detected in highly purified mitochondria in high-throughput studies; proposed to be involved in resistance to mechlorethamine and streptozotocin; null mutant sensitive to expression of top1-T722A allele","termid":"PBO:0086583"}


id: SO:0001960
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified DNA cytosine base feature, modified by a hydroxymethyl group at the 5 carbon.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated_cytosine","termid":"SO:0000114"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_hydroxymethylcytosine","secondary_identifiers":["http:http\\://www.pacificbiosciences.com/pdf/WP_Detecting_DNA_Base_Modifications_Using_SMRT_Sequencing.pdf"],"synonyms":[{"name":"5-hmC","type":"exact"},{"name":"5-hydroxymethylcytosine","type":"exact"}],"termid":"SO:0001960"}


id: PBO:0086041
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in ergosterol biosynthesis; conditional mutants produce less ergosterol, display impaired oxygen consumption, respiratory growth, mitochondrial iron utilization, and are more sensitive to oxidative stress; mutant bm-8 has a growth defect on iron-limited medium that is complemented by overexpression of Yfh1p; protein localizes to the cytoplasm, ER and nuclear envelope; highly conserved in ascomycetes","termid":"PBO:0086041"}


id: PBO:0070496
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 31","termid":"PBO:0070496"}


id: GO:0061675
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the rhamnose-binding lectin (RBL) family, a family of animal lectins that show specific binding activities to L-rhamnose or D-galactose.","definition_xrefs":["PMID:22312473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"RBL family protein binding","synonyms":[{"name":"rhamnose-binding lectin family protein binding","type":"exact"}],"termid":"GO:0061675"}


id: PR:P32390
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An actin-related protein 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-related protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.03","secondary_identifiers":["UniProtKB:P32390"],"synonyms":[{"name":"SPAC630.03","type":"related"},{"name":"Spom972h-ACTR3","type":"exact"},{"name":"actin-like protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P32390"}


id: PBO:0069388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 648, pseudogene","termid":"PBO:0069388"}


id: PBO:0072877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stabilizer of axonemal microtubules 2","termid":"PBO:0072877"}


id: PBO:0015701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine racemase Sry1","termid":"PBO:0015701"}


id: PBO:0045275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 26","termid":"PBO:0045275"}


id: PBO:0053664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 841","termid":"PBO:0053664"}


id: GO:0002545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A chronic inflammatory response to a non-antigenic stimulus such as heat or physical trauma.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic inflammatory response","termid":"GO:0002544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chronic inflammatory response to non-antigenic stimulus","termid":"GO:0002545"}


id: PBO:0040255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATG10 antisense RNA 1","termid":"PBO:0040255"}


id: PBO:0081803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 732","termid":"PBO:0081803"}


id: FYPO:0005873
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a secondary septum that is thicker than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased septum thickness","termid":"FYPO:0001406"},{"relation_name":"output_of","term_name":"abnormal secondary cell septum biogenesis","termid":"FYPO:0003211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"increased secondary cell septum thickness","synonyms":[{"name":"increased secondary cell septum thickness during mitotic cell cycle","type":"related"},{"name":"increased secondary cell septum thickness during vegetative growth","type":"exact"},{"name":"increased secondary septum thickness","type":"exact"},{"name":"thick secondary septum","type":"exact"}],"termid":"FYPO:0005873"}


id: PATO:0000850
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000850 relative auditory ability (obsolete PATO:0000850)","termid":"PATO:0000850"}


id: GO:0050583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + H2 = NADPH + H+.","definition_xrefs":["MetaCyc:1.12.1.3-RXN","EC:1.12.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor, NAD or NADP as acceptor","termid":"GO:0016696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydrogen dehydrogenase (NADP+) activity","secondary_identifiers":["RHEA:18637"],"synonyms":[{"name":"NADP-linked hydrogenase activity","type":"related"},{"name":"NADP-reducing hydrogenase activity","type":"related"},{"name":"hydrogen:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050583"}


id: PBO:0039235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminolevulinate dehydratase","termid":"PBO:0039235"}


id: PBO:0036226
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_translation_of_ribosomal_proteins_during_vegetative_growth","termid":"PBO:0036226"}


id: PR:Q9P790
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 72 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13275:SF4","OMA:SCHPO02667","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWR complex protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.13c","secondary_identifiers":["UniProtKB:Q9P790"],"synonyms":[{"name":"Spom972h-VPS72","type":"exact"}],"termid":"PR:Q9P790"}


id: PBO:0057791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3117","termid":"PBO:0057791"}


id: MOD:00829
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-phenylalanine residue and an L-serine residue by an ester bond to form S-(L-phenylalaninyl)-L-serine.","definition_xrefs":["RESID:AA0418","PubMed:12591958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ester crosslinked residues","termid":"MOD:00885"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(L-phenylalanyl)-L-serine","synonyms":[{"name":"(2S)-2-amino-3-([(2S)-2-amino-3-phenylpropanoyl]oxy)propanoic acid","type":"exact"},{"name":"CROSSLNK Phenylalanyl serine ester (Ser-Phe)","type":"exact"},{"name":"O-(2-amino-3-phenylpropanoyl)serine","type":"exact"},{"name":"O-(L-phenylalanyl)-L-serine","type":"exact"},{"name":"XLNK1PheOSer","type":"exact"},{"name":"phenylalanine serine ester","type":"exact"}],"termid":"MOD:00829"}


id: PBO:0005840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extender of the chronological lifespan protein Ecl1","termid":"PBO:0005840"}


id: PBO:0005260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TREX complex subunit Tex1 (predicted)","termid":"PBO:0005260"}


id: PBO:0001931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein involved in cytochrome c oxidase assembly Cox16 (predicted)","termid":"PBO:0001931"}


id: GO:0032228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of GABAergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter gamma-aminobutyric acid (GABA).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"regulates","term_name":"synaptic transmission, GABAergic","termid":"GO:0051932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic transmission, GABAergic","termid":"GO:0032228"}


id: GO:1903027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of opsonization.","definition_xrefs":["GOC:BHF","GO_REF:0000058","GOC:rl","GOC:TermGenie","PMID:22333221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"opsonization","termid":"GO:0008228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of opsonization","termid":"GO:1903027"}


id: PBO:0040248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 4C cysteine peptidase","termid":"PBO:0040248"}


id: PBO:0078603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 16","termid":"PBO:0078603"}


id: FYPO:0006836
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to magnesium chloride. Cells stop growing (and may die) at a concentration of magnesium chloride that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0002683","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to magnesium chloride","synonyms":[{"name":"hypersensitive to magnesium chloride","type":"exact"},{"name":"sensitive to MgCl2","type":"exact"},{"name":"sensitive to magnesium chloride during mitotic cell cycle","type":"related"},{"name":"sensitive to magnesium chloride during vegetative growth","type":"exact"}],"termid":"FYPO:0006836"}


id: MOD:01765
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Proteome Sciences TMT6plex-131 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-131 reporter+balance reagent acylated residue","termid":"MOD:01760"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-131 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01765"}


id: MOD:00711
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces three hydrogen atoms with three methyl groups, after a proton has been added to form an aminium group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trimethylated residue","termid":"MOD:00430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"trimethylated protonated-residue","synonyms":[{"name":"Me3+Res","type":"exact"}],"termid":"MOD:00711"}


id: PR:O74340
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DDB1- and CUL4-associated factor 13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03079","PANTHER:PTHR22851:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sof1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.07c","secondary_identifiers":["UniProtKB:O74340"],"synonyms":[{"name":"Spom972h-DCAF13","type":"exact"},{"name":"U3 small nucleolar RNA-associated protein sof1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein sof1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74340"}


id: GO:0018489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADH + O2 + vanillate = 3,4-dihydroxybenzoate + formaldehyde + H2O + NAD+.","definition_xrefs":["EC:1.14.13.82","RHEA:13021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"},{"relation_name":"is_a","term_name":"demethylase activity","termid":"GO:0032451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"vanillate monooxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0146","KEGG_REACTION:R05274","MetaCyc:RXN-10891"],"synonyms":[{"name":"4-hydroxy-3-methoxybenzoate demethylase activity","type":"related"},{"name":"vanillate demethylase (aerobic) activity","type":"exact"},{"name":"vanillate demethylase activity","type":"exact"},{"name":"vanillate:oxygen oxidoreductase (demethylating)","type":"related"}],"termid":"GO:0018489"}


id: FYPO:0008189
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which sister kinetochores become separated during the first meiotic nuclear division, and sister chromatids subsequently separate to result in equational segregation, only visible in the absence of chiasmata. Equational sister chromatid separation is caused by bi-orientated attachment of sister chromatids.","direct_ancestors":[{"relation_name":"is_a","term_name":"sister kinetochore dissociation in meiotic metaphase I with  equational sister chromatid  segregation in meiosis I","termid":"FYPO:0005634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000641","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"equational sister chromatid segregation during achiasmatic meiosis I","termid":"FYPO:0008189"}


id: PBO:0067527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 671, pseudogene","termid":"PBO:0067527"}


id: PBO:0071171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 11","termid":"PBO:0071171"}


id: GO:0002472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a macrophage expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.","definition_xrefs":["PMID:15771591","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage antigen processing and presentation","termid":"GO:0002472"}


id: GO:0004189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of the Glu-Tyr bond to release the C-terminal tyrosine residue from the native tyrosinated tubulin. Inactive on Z-Glu-Tyr.","definition_xrefs":["EC:3.4.17.17"],"gene_count":0,"genotype_count":0,"name":"obsolete tubulinyl-Tyr carboxypeptidase activity (obsolete GO:0004189)","synonyms":[{"name":"TTCPase activity","type":"related"},{"name":"brain I carboxypeptidase activity","type":"related"},{"name":"carboxypeptidase-tubulin activity","type":"related"},{"name":"soluble carboxypeptidase activity","type":"related"},{"name":"tubulin carboxypeptidase activity","type":"related"},{"name":"tubulin-tyrosine carboxypeptidase activity","type":"related"},{"name":"tubulinyl-Tyr carboxypeptidase activity","type":"exact"},{"name":"tubulinyl-tyrosine carboxypeptidase activity","type":"exact"},{"name":"tubulinyltyrosine carboxypeptidase activity","type":"related"},{"name":"tyrosinotubulin carboxypeptidase activity","type":"related"},{"name":"tyrosyltubulin carboxypeptidase activity","type":"related"}],"termid":"GO:0004189"}


id: PBO:0085212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAC motif binding protein involved in rRNA and ribosome biogenesis; subunit of the RPD3L histone deacetylase complex; Myb-like HTH transcription factor; hypophosphorylated by rapamycin treatment in a Sch9p-dependent manner; activated in stochastic pulses of nuclear localization","termid":"PBO:0085212"}


id: FYPO:0008210
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) at one or more promoter regions does not occur.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished chromatin binding","termid":"FYPO:0001093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000702","FYPO:0001985"],"is_obsolete":false,"name":"abolished chromatin binding at promoter region","termid":"FYPO:0008210"}


id: PBO:0054828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2241","termid":"PBO:0054828"}


id: PBO:0060107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 8","termid":"PBO:0060107"}


id: PBO:0091728
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sfr1 assembly at DNA damage sites is dependent on Rad51","termid":"PBO:0091728"}


id: GO:0010170
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that catalyzes the synthesis of ADP-glucose and pyrophosphate from glucose-1-phosphate and ATP. In plants, the complex is a heterotetramer composed of two types of subunits (small and large). In bacteria, the enzyme complex is composed of four identical subunits.","definition_xrefs":["PMID:12748181","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"adenylyltransferase complex","termid":"GO:1902503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"glucose-1-phosphate adenylyltransferase complex","termid":"GO:0010170"}


id: GO:1905827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of selenocysteine metabolic process.","definition_xrefs":["GO_REF:0000058","PMID:19716792","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of selenocysteine metabolic process","termid":"GO:1905825"},{"relation_name":"positively_regulates","term_name":"selenocysteine metabolic process","termid":"GO:0016259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"positive regulation of selenocysteine metabolic process","synonyms":[{"name":"activation of selenocysteine metabolic process","type":"narrow"},{"name":"activation of selenocysteine metabolism","type":"narrow"},{"name":"positive regulation of selenocysteine metabolism","type":"exact"},{"name":"up regulation of selenocysteine metabolic process","type":"exact"},{"name":"up regulation of selenocysteine metabolism","type":"exact"},{"name":"up-regulation of selenocysteine metabolic process","type":"exact"},{"name":"up-regulation of selenocysteine metabolism","type":"exact"},{"name":"upregulation of selenocysteine metabolic process","type":"exact"},{"name":"upregulation of selenocysteine metabolism","type":"exact"}],"termid":"GO:1905827"}


id: PBO:0043841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide-1-phosphate transfer protein","termid":"PBO:0043841"}


id: PBO:0002031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp7 (predicted)","termid":"PBO:0002031"}


id: PBO:0056609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malic enzyme 2","termid":"PBO:0056609"}


id: GO:0048817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of hair follicle maturation.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hair follicle maturation","termid":"GO:0048819"},{"relation_name":"is_a","term_name":"negative regulation of hair follicle development","termid":"GO:0051799"},{"relation_name":"negatively_regulates","term_name":"hair follicle maturation","termid":"GO:0048820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hair follicle maturation","synonyms":[{"name":"down regulation of hair follicle maturation","type":"exact"},{"name":"down-regulation of hair follicle maturation","type":"exact"},{"name":"downregulation of hair follicle maturation","type":"exact"},{"name":"inhibition of hair follicle maturation","type":"narrow"}],"termid":"GO:0048817"}


id: GO:0038133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of a ligand to a ERBB3 receptor on the surface of a cell, followed by transmission of the signal by a heterodimeric complex of ERBB2 and ERBB3. ERBB2, which does not bind any known ligand, is activated through formation of a heterodimer with another ligand-activated ERBB family member such as ERBB3. ERBB3 also has impaired kinase activity and relies on ERBB2 for activation and signal transmission.","definition_xrefs":["GOC:signaling","PMID:16460914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ERBB2 signaling pathway","termid":"GO:0038128"},{"relation_name":"is_a","term_name":"ERBB3 signaling pathway","termid":"GO:0038129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ERBB2-ERBB3 signaling pathway","synonyms":[{"name":"ERBB2-ERBB3 signalling pathway","type":"exact"},{"name":"HER2-HER3 signaling pathway","type":"exact"}],"termid":"GO:0038133"}


id: PBO:0059144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megakaryocyte and platelet inhibitory receptor G6b","termid":"PBO:0059144"}


id: GO:0050611
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + arsenite + 2 oxidized azurin = 2 H+ + 2 reduced azurin + arsenate.","definition_xrefs":["MetaCyc:1.20.98.1-RXN","EC:1.20.9.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, with a copper protein as acceptor","termid":"GO:0052882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"arsenate reductase (azurin) activity","secondary_identifiers":["RHEA:18701","GO:0018691","UM-BBD_reactionID:r0634"],"synonyms":[{"name":"arsenite oxidase activity","type":"related"},{"name":"arsenite:azurin oxidoreductase activity","type":"related"}],"termid":"GO:0050611"}


id: PBO:0087123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING-type ubiquitin ligase of the endosomal and vacuolar membranes; binds phosphatidylinositol 3-phosphate; contains a FYVE finger domain","termid":"PBO:0087123"}


id: PBO:0047620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folliculogenesis specific bHLH transcription factor","termid":"PBO:0047620"}


id: RO:0002429
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"involved_in_regulation_of","termid":"RO:0002428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in_positive_regulation_of","termid":"RO:0002429"}


id: PBO:0039242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALDH1A2 antisense RNA 1","termid":"PBO:0039242"}


id: GO:0043139
data:
  {"annotated_genes":["SJAG_00995","SJAG_03495","SJAG_03780"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88222,108585,114249],"is_not":false,"summary":null,"term":"GO:0043139"}]},"cv_name":"molecular_function","definition":"Unwinding a DNA helix in the 5' to 3' direction, driven by ATP hydrolysis.","definition_xrefs":["EC:5.6.2.3","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase activity","termid":"GO:0003678"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00995":null,"SJAG_03495":null,"SJAG_03780":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0140097","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"5'-3' DNA helicase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6782131","GO:0008722","GO:0043141"],"synonyms":[{"name":"5' to 3' DNA helicase activity","type":"exact"},{"name":"ATP-dependent 5' to 3' DNA helicase activity","type":"exact"},{"name":"ATP-dependent 5'-3' DNA helicase activity","type":"exact"},{"name":"DNA helicase IV activity","type":"narrow"}],"termid":"GO:0043139","terms_by_termid":{"GO:0043139":null}}


id: GO:0106110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of type B trichothecene vomitoxin, also known as deoxynivalenol, a poisonous substance produced by some species of fungi and predominantly occurs in grains such as wheat, barley and oats.","definition_xrefs":["PMID:8637056","PMID:19333439","PMID:25758923","PMID:25680507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid biosynthetic process","termid":"GO:0016106"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"epoxide metabolic process","termid":"GO:0097176"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"vomitoxin biosynthetic process","synonyms":[{"name":"DON biosynthetic process","type":"exact"},{"name":"deoxynivalenol biosynthetic process","type":"exact"},{"name":"vomitoxin anabolism","type":"exact"},{"name":"vomitoxin biosynthesis","type":"exact"},{"name":"vomitoxin formation","type":"exact"},{"name":"vomitoxin synthesis","type":"exact"}],"termid":"GO:0106110"}


id: GO:0061575
data:
  {"annotated_genes":["SJAG_03699","SJAG_04614","SJAG_00439","SJAG_03618","SJAG_04140","SJAG_01213","SJAG_01401","SJAG_02057"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97683,101060,104929,106973,107265,108147,109037,113151],"is_not":false,"summary":null,"term":"GO:0061575"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a cyclin-dependent protein serine/threonine kinase.","definition_xrefs":["GOC:dph","PMID:2569363","PMID:3322810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein serine/threonine kinase regulator activity","termid":"GO:0016538"},{"relation_name":"is_a","term_name":"protein serine/threonine kinase activator activity","termid":"GO:0043539"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00439":null,"SJAG_01213":null,"SJAG_01401":null,"SJAG_02057":null,"SJAG_03618":null,"SJAG_03699":null,"SJAG_04140":null,"SJAG_04614":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140677","GO:0098772","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"cyclin-dependent protein serine/threonine kinase activator activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0016535","GO:0016534"],"synonyms":[{"name":"cyclin-dependent protein kinase 5 activator activity","type":"narrow"}],"termid":"GO:0061575","terms_by_termid":{"GO:0061575":null}}


id: PBO:0080179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 2","termid":"PBO:0080179"}


id: PBO:0046334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENOX2 antisense RNA 1","termid":"PBO:0046334"}


id: PBO:0060841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofilament light chain","termid":"PBO:0060841"}


id: PBO:0006173
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_target_anatomical_entity","termid":"PBO:0006173"}


id: GO:0039510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of host ATP-dependent RNA helicase activity.","definition_xrefs":["GOC:sp","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host ATP-dependent RNA helicase activity (obsolete GO:0039510)","synonyms":[{"name":"down-regulation by virus of host ATP-dependent RNA helicase activity","type":"exact"},{"name":"downregulation by virus of host ATP-dependent RNA helicase activity","type":"exact"},{"name":"inhibition by virus of host ATP-dependent RNA helicase activity","type":"narrow"},{"name":"negative regulation by virus of host ATP-dependent RNA helicase activity","type":"exact"}],"termid":"GO:0039510"}


id: PBO:0039514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 30B pseudogene 2","termid":"PBO:0039514"}


id: PBO:0067948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 250","termid":"PBO:0067948"}


id: MOD:00756
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-valine residue to 4-hydroxy-D-valine.","definition_xrefs":["PubMed:15853325","RESID:AA0388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-hydroxy-D-valine","synonyms":[{"name":"(2R,3Xi)-2-amino-4-hydroxy-3-methylbutanoic acid","type":"exact"},{"name":"4-hydroxy-D-valine","type":"exact"},{"name":"D-4HyVal","type":"exact"},{"name":"D-gamma-hydroxyvaline","type":"exact"},{"name":"MOD_RES D-4-hydroxyvaline","type":"exact"}],"termid":"MOD:00756"}


id: PBO:0044481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 26 subfamily A member 1","termid":"PBO:0044481"}


id: PBO:0047487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferredoxin 2","termid":"PBO:0047487"}


id: GO:0035819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An increase in the amount of sodium excreted in urine over a unit of time, as a result of pressure natriuresis.","definition_xrefs":["GOC:mtg_25march11","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pressure natriuresis","termid":"GO:0003095"},{"relation_name":"is_a","term_name":"positive regulation of renal sodium excretion","termid":"GO:0035815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of renal sodium excretion by pressure natriuresis","synonyms":[{"name":"natriuresis resulting from pressure natriuresis","type":"related"}],"termid":"GO:0035819"}


id: PBO:0089486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-amino-4-deoxychorismate lyase Abz2","termid":"PBO:0089486"}


id: GO:0045507
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-25 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-17 receptor activity","termid":"GO:0030368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-25 receptor activity","synonyms":[{"name":"IL-25 receptor activity","type":"exact"},{"name":"IL-25R","type":"exact"}],"termid":"GO:0045507"}


id: GO:0003371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of polarized cytoskeletal structures that contribute to the cell polarity of a migrating ameboid cell.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of cytoskeleton polarity","termid":"GO:0030952"},{"relation_name":"part_of","term_name":"establishment of cell polarity involved in ameboidal cell migration","termid":"GO:0003365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163","GO:0007010"],"is_obsolete":false,"name":"establishment or maintenance of cytoskeleton polarity involved in ameboidal cell migration","termid":"GO:0003371"}


id: GO:0016488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the sesquiterpenoid alcohol farnesol, 3,7,11-trimethyl-2,6,10,dodecatrien-1-ol.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenol catabolic process","termid":"GO:0016095"},{"relation_name":"is_a","term_name":"sesquiterpenoid catabolic process","termid":"GO:0016107"},{"relation_name":"is_a","term_name":"farnesol metabolic process","termid":"GO:0016487"},{"relation_name":"is_a","term_name":"primary alcohol catabolic process","termid":"GO:0034310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"farnesol catabolic process","synonyms":[{"name":"farnesol breakdown","type":"exact"},{"name":"farnesol catabolism","type":"exact"},{"name":"farnesol degradation","type":"exact"}],"termid":"GO:0016488"}


id: PBO:0071875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 13","termid":"PBO:0071875"}


id: PBO:0045491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Down syndrome critical region 9","termid":"PBO:0045491"}


id: GO:0017195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The acetylation of the N-terminal lysine of proteins to form the derivative N2-acetyl-L-lysine. The occurrence of this modification has not been confirmed.","definition_xrefs":["RESID:AA0048"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-lysine N2-acetylation (obsolete GO:0017195)","termid":"GO:0017195"}


id: MOD:00480
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["OMSSA:129","URL:http://www.appliedbiosystems.com/products/productdetail.cfm?prod_id=153","Unimod:105#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Applied Biosystems cleavable ICAT(TM) light","synonyms":[{"name":"Applied Biosystems cleavable ICAT(TM) light","type":"related"},{"name":"ICAT-C","type":"related"},{"name":"icatlight","type":"exact"}],"termid":"MOD:00480"}


id: PBO:0075506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPC24 component of NDC80 kinetochore complex","termid":"PBO:0075506"}


id: PBO:0058728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6856","termid":"PBO:0058728"}


id: PBO:0042559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase like 1","termid":"PBO:0042559"}


id: PBO:0028178
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_vanadate","termid":"PBO:0028178"}


id: PBO:0026988
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_nigericin","termid":"PBO:0026988"}


id: PBO:0083392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps ORF ATS1/YAL020C","termid":"PBO:0083392"}


id: GO:0031447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of fast-twitch skeletal muscle contraction.","definition_xrefs":["GOC:tb","GOC:ef","GOC:mah","GOC:dph","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fast-twitch skeletal muscle fiber contraction","termid":"GO:0031446"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle contraction","termid":"GO:0045988"},{"relation_name":"negatively_regulates","term_name":"fast-twitch skeletal muscle fiber contraction","termid":"GO:0031443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fast-twitch skeletal muscle fiber contraction","synonyms":[{"name":"down regulation of fast-twitch skeletal muscle contraction","type":"exact"},{"name":"down-regulation of fast-twitch skeletal muscle contraction","type":"exact"},{"name":"downregulation of fast-twitch skeletal muscle contraction","type":"exact"},{"name":"inhibition of fast-twitch skeletal muscle contraction","type":"narrow"},{"name":"negative regulation of fast-twitch skeletal muscle contraction","type":"exact"}],"termid":"GO:0031447"}


id: PBO:0108928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBL pseudogene 1","termid":"PBO:0108928"}


id: PBO:0046850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 12 pseudogene 1","termid":"PBO:0046850"}


id: PBO:0030608
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_calcium_level","termid":"PBO:0030608"}


id: PBO:0002343
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosialidosis","termid":"PBO:0002343"}


id: FYPO:0000970
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to mitomycin C. Cells stop growing (and may die) at a concentration of mitomycin C that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to mitomycin C","synonyms":[{"name":"hypersensitive to mitomycin C","type":"exact"},{"name":"sensitive to mitomycin C during mitotic cell cycle","type":"related"},{"name":"sensitive to mitomycin C during vegetative growth","type":"exact"}],"termid":"FYPO:0000970"}


id: PBO:0003233
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"klp5 and klp6 enter the nucleus separately","termid":"PBO:0003233"}


id: PBO:0083958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"General amino acid permease; involved in uptake of all L-amino acids, some D-amino acids, related compounds, toxic analogs and polyamines; regulated by nitrogen source; targeted to vacuole for degradation under preferential nitrogen source; essential for invasive growth","termid":"PBO:0083958"}


id: GO:0042612
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transmembrane protein complex composed of a MHC class I alpha chain and an invariant beta2-microglobin chain, and with or without a bound peptide antigen. Class I here refers to classical class I molecules.","definition_xrefs":["GOC:add","ISBN:0781735149","ISBN:0120781859","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex","termid":"GO:0042611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"MHC class I protein complex","termid":"GO:0042612"}


id: FYPO:0003462
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose measured in a cell is normal (i.e. indistinguishable from wild type) when the cell is subject to oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular trehalose level","termid":"FYPO:0001449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular trehalose level during cellular response to oxidative stress","synonyms":[{"name":"normal cellular trehalose accumulation during cellular response to oxidative stress","type":"related"},{"name":"normal cellular trehalose level during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"normal cellular trehalose level during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"normal cellular trehalose level during oxidative stress response","type":"exact"}],"termid":"FYPO:0003462"}


id: PBO:0071569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 35","termid":"PBO:0071569"}


id: PBO:0080275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 38 pseudogene","termid":"PBO:0080275"}


id: PBO:0052413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, three Ig domains and long cytoplasmic tail 2","termid":"PBO:0052413"}


id: PBO:0017633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inorganic pyrophosphatase Ipp1 (predicted)","termid":"PBO:0017633"}


id: PBO:0089829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein Nop4","termid":"PBO:0089829"}


id: GO:0035790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated a ligand binding to an alpha-type platelet-derived growth factor receptor (PDGFalpha) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:10372961","GOC:bf","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"platelet-derived growth factor receptor signaling pathway","termid":"GO:0048008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"platelet-derived growth factor receptor-alpha signaling pathway","synonyms":[{"name":"PDGF receptor-alpha signaling pathway","type":"exact"},{"name":"PDGFR-alpha signaling pathway","type":"related"},{"name":"alphaPDGF receptor signaling pathway","type":"exact"},{"name":"platelet-derived growth factor receptor-alpha signalling pathway","type":"exact"}],"termid":"GO:0035790"}


id: PBO:0030584
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_arginine_level","termid":"PBO:0030584"}


id: GO:0038085
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vascular endothelial growth factor.","definition_xrefs":["PMID:17470632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"vascular endothelial growth factor binding","synonyms":[{"name":"VEGF binding","type":"exact"}],"termid":"GO:0038085"}


id: MOD:02033
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex Hex(5) HexNAc(3)","definition_xrefs":["Unimod:1484","PubMed:33135055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"dHex1Hex5HexNAc3 N4-glycosylated asparagine","synonyms":[{"name":"dHex Hex(5) HexNAc(3)","type":"related"}],"termid":"MOD:02033"}


id: PBO:0087445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit II of cytochrome c oxidase (Complex IV); Complex IV is the terminal member of the mitochondrial inner membrane electron transport chain; one of three mitochondrially-encoded subunits","termid":"PBO:0087445"}


