# terms

id: PBO:0029535
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_normal_volume_spheroid_vegetative_cell","termid":"PBO:0029535"}


id: PBO:0054142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1508","termid":"PBO:0054142"}


id: GO:0051216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cartilage element over time, from its formation to the mature structure. Cartilage elements are skeletal elements that consist of connective tissue dominated by extracellular matrix containing collagen type II and large amounts of proteoglycan, particularly chondroitin sulfate.","definition_xrefs":["PMID:23251424","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"skeletal system development","termid":"GO:0001501"},{"relation_name":"part_of","term_name":"connective tissue development","termid":"GO:0061448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cartilage development","secondary_identifiers":["Wikipedia:Chondrogenesis"],"synonyms":[{"name":"cartilage biogenesis","type":"exact"},{"name":"cartilage biosynthesis","type":"exact"},{"name":"cartilage element development","type":"exact"},{"name":"cartilage formation","type":"exact"},{"name":"cartilage organ development","type":"exact"},{"name":"chondrogenesis","type":"exact"}],"termid":"GO:0051216"}


id: GO:0016338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one cell to another cell via adhesion molecules that do not require the presence of calcium for the interaction.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules","synonyms":[{"name":"calcium-independent cell adhesion molecule activity","type":"related"}],"termid":"GO:0016338"}


id: SO:0000804
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that is engineered.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"biomaterial_region","termid":"SO:0001409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_region","synonyms":[{"name":"construct","type":"exact"},{"name":"engineered region","type":"exact"},{"name":"engineered sequence","type":"exact"}],"termid":"SO:0000804"}


id: GO:1901896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of an ATPase-coupled calcium transmembrane transporter activity.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:TermGenie","PMID:19708671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ATP-dependent activity","termid":"GO:0032781"},{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transporter activity","termid":"GO:1901021"},{"relation_name":"is_a","term_name":"regulation of ATPase-coupled calcium transmembrane transporter activity","termid":"GO:1901894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of ATPase-coupled calcium transmembrane transporter activity","synonyms":[{"name":"activation of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"activation of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"activation of Ca2+-pumping ATPase activity","type":"exact"},{"name":"activation of Ca2+-transporting ATPase activity","type":"exact"},{"name":"activation of calcium ABC transporter","type":"narrow"},{"name":"activation of calcium efflux ATPase","type":"narrow"},{"name":"activation of calcium pump","type":"broad"},{"name":"activation of calcium transporting ATPase activity","type":"exact"},{"name":"activation of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"activation of calcium-transporting ATPase activity","type":"narrow"},{"name":"activation of plasma membrane Ca-ATPase","type":"narrow"},{"name":"activation of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"activation of sarcoplasmic reticulum ATPase","type":"narrow"},{"name":"positive regulation of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"positive regulation of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"positive regulation of Ca2+-pumping ATPase activity","type":"exact"},{"name":"positive regulation of Ca2+-transporting ATPase activity","type":"exact"},{"name":"positive regulation of calcium ABC transporter","type":"narrow"},{"name":"positive regulation of calcium efflux ATPase","type":"narrow"},{"name":"positive regulation of calcium pump","type":"broad"},{"name":"positive regulation of calcium transporting ATPase activity","type":"exact"},{"name":"positive regulation of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"positive regulation of calcium-transporting ATPase activity","type":"exact"},{"name":"positive regulation of plasma membrane Ca-ATPase","type":"narrow"},{"name":"positive regulation of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"positive regulation of sarcoplasmic reticulum ATPase","type":"narrow"},{"name":"up regulation of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"up regulation of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"up regulation of Ca2+-pumping ATPase activity","type":"exact"},{"name":"up regulation of Ca2+-transporting ATPase activity","type":"exact"},{"name":"up regulation of calcium ABC transporter","type":"narrow"},{"name":"up regulation of calcium efflux ATPase","type":"narrow"},{"name":"up regulation of calcium pump","type":"broad"},{"name":"up regulation of calcium transporting ATPase activity","type":"exact"},{"name":"up regulation of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"up regulation of calcium-transporting ATPase activity","type":"exact"},{"name":"up regulation of plasma membrane Ca-ATPase","type":"narrow"},{"name":"up regulation of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"up regulation of sarcoplasmic reticulum ATPase","type":"narrow"},{"name":"up-regulation of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"up-regulation of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"up-regulation of Ca2+-pumping ATPase activity","type":"exact"},{"name":"up-regulation of Ca2+-transporting ATPase activity","type":"exact"},{"name":"up-regulation of calcium ABC transporter","type":"narrow"},{"name":"up-regulation of calcium efflux ATPase","type":"narrow"},{"name":"up-regulation of calcium pump","type":"broad"},{"name":"up-regulation of calcium transporting ATPase activity","type":"exact"},{"name":"up-regulation of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"up-regulation of calcium-transporting ATPase activity","type":"exact"},{"name":"up-regulation of plasma membrane Ca-ATPase","type":"narrow"},{"name":"up-regulation of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"up-regulation of sarcoplasmic reticulum ATPase","type":"narrow"},{"name":"upregulation of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"upregulation of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"upregulation of Ca2+-pumping ATPase activity","type":"exact"},{"name":"upregulation of Ca2+-transporting ATPase activity","type":"exact"},{"name":"upregulation of calcium ABC transporter","type":"narrow"},{"name":"upregulation of calcium efflux ATPase","type":"narrow"},{"name":"upregulation of calcium pump","type":"broad"},{"name":"upregulation of calcium transporting ATPase activity","type":"exact"},{"name":"upregulation of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"upregulation of calcium-transporting ATPase activity","type":"exact"},{"name":"upregulation of plasma membrane Ca-ATPase","type":"narrow"},{"name":"upregulation of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"upregulation of sarcoplasmic reticulum ATPase","type":"narrow"}],"termid":"GO:1901896"}


id: FYPO:0004382
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a single kinetochore becomes attached to both spindle poles, and sister chromatids do not move towards the spindle poles at the same time during mitosis prior to completion of chromosome segregation.","definition_xrefs":["PMID:20935472","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lagging mitotic chromosomes","termid":"FYPO:0000228"},{"relation_name":"has_part","term_name":"merotelic kinetochore attachment during mitosis","termid":"FYPO:0004381"},{"relation_name":"is_a","term_name":"abnormal attachment of mitotic spindle microtubules to kinetochore","termid":"FYPO:0004213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0000641","FYPO:0000337","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"meroterically attached lagging mitotic chromosomes","synonyms":[{"name":"abnormal mitotic sister chromatid segregation, with merotelic kinetochore attachment and lagging mitotic chromosomes","type":"exact"},{"name":"lagging mitotic chromosomes with merotelic kinetochore attachment","type":"exact"},{"name":"lagging mitotic sister chromatids, with merotelic kinetochore attachment","type":"exact"},{"name":"merotelic kinetochore attachment with lagging mitotic chromosomes","type":"exact"},{"name":"meroterically attached lagging mitotic chromosomes during mitotic cell cycle","type":"related"},{"name":"meroterically attached lagging mitotic chromosomes during vegetative growth","type":"exact"}],"termid":"FYPO:0004382"}


id: GO:0048075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of a pattern of pigment in the eye of an organism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eye pigmentation","termid":"GO:0048073"},{"relation_name":"is_a","term_name":"positive regulation of developmental pigmentation","termid":"GO:0048087"},{"relation_name":"positively_regulates","term_name":"eye pigmentation","termid":"GO:0048069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of eye pigmentation","synonyms":[{"name":"activation of eye pigmentation","type":"narrow"},{"name":"stimulation of eye pigmentation","type":"narrow"},{"name":"up regulation of eye pigmentation","type":"exact"},{"name":"up-regulation of eye pigmentation","type":"exact"},{"name":"upregulation of eye pigmentation","type":"exact"}],"termid":"GO:0048075"}


id: PBO:0054820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2233","termid":"PBO:0054820"}


id: GO:0043701
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tissue-specific, membrane-bounded cytoplasmic organelle within which an unknown blue pigment is localized. Cyanosomes are synthesized in cyanophores and are blue in appearance.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment granule","termid":"GO:0048770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"cyanosome","termid":"GO:0043701"}


id: GO:0050172
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phenylalanine + O2 = 2-phenylacetamide + CO2 + H2O.","definition_xrefs":["EC:1.13.12.9","RHEA:10712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phenylalanine 2-monooxygenase activity","secondary_identifiers":["MetaCyc:PHENYLALANINE-2-MONOOXYGENASE-RXN","KEGG_REACTION:R00690"],"synonyms":[{"name":"L-phenylalanine oxidase (deaminating and decarboxylating)","type":"related"},{"name":"L-phenylalanine:oxygen 2-oxidoreductase (decarboxylating)","type":"related"},{"name":"l-phenylalanine oxidase (deaminating and decarboxylating) activity","type":"related"},{"name":"phenylalanine (deaminating, decarboxylating) oxidase activity","type":"related"},{"name":"phenylalanine (deaminating, decarboxylating)oxidase activity","type":"related"}],"termid":"GO:0050172"}


id: PBO:0080403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS35 retromer complex component","termid":"PBO:0080403"}


id: GO:1905133
data:
  {"annotated_genes":["SJAG_01515","SJAG_04259","SJAG_03327","SJAG_01837","SJAG_01082","SJAG_01330","SJAG_04126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110562,102363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[112749,97855,102364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033316"},{"annotations":[94755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902103"},{"annotations":[109853],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[97392],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of meiotic chromosome separation.","definition_xrefs":["PMID:15620645","GOC:vw","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meiotic chromosome separation","termid":"GO:1905132"},{"relation_name":"is_a","term_name":"negative regulation of chromosome separation","termid":"GO:1905819"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"meiotic chromosome separation","termid":"GO:0051307"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_01330":null,"SJAG_01515":null,"SJAG_01837":null,"SJAG_03327":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of meiotic chromosome separation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of chromosome separation during meiosis","type":"exact"},{"name":"down regulation of meiotic chromosome resolution","type":"exact"},{"name":"down regulation of meiotic chromosome separation","type":"exact"},{"name":"down-regulation of chromosome separation during meiosis","type":"exact"},{"name":"down-regulation of meiotic chromosome resolution","type":"exact"},{"name":"down-regulation of meiotic chromosome separation","type":"exact"},{"name":"downregulation of chromosome separation during meiosis","type":"exact"},{"name":"downregulation of meiotic chromosome resolution","type":"exact"},{"name":"downregulation of meiotic chromosome separation","type":"exact"},{"name":"inhibition of chromosome separation during meiosis","type":"narrow"},{"name":"inhibition of meiotic chromosome resolution","type":"narrow"},{"name":"inhibition of meiotic chromosome separation","type":"narrow"},{"name":"negative regulation of chromosome separation during meiosis","type":"exact"},{"name":"negative regulation of meiotic chromosome resolution","type":"exact"}],"termid":"GO:1905133","terms_by_termid":{"GO:0033316":null,"GO:1902103":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: PBO:0028595
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_binding_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0028595"}


id: PBO:0071320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27a pseudogene 4","termid":"PBO:0071320"}


id: SO:0000050
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A part of a gene, that has no other route in the ontology back to region. This concept is necessary for logical inference as these parts must have the properties of region. It also allows us to associate all the parts of genes with a gene.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000050 gene_part (obsolete SO:0000050)","termid":"SO:0000050"}


id: PBO:0001625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk15 (predicted)","termid":"PBO:0001625"}


id: GO:0044500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant decrease of the force with which blood travels through the circulatory system of the bitten/stung organism.","definition_xrefs":["GOC:jl","PMID:19837656","GOC:fj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of blood pressure in another organism","termid":"GO:0044498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in negative regulation of blood pressure in another organism","synonyms":[{"name":"envenomation resulting in negative regulation of blood pressure in other organism","type":"exact"},{"name":"hypotensive activity in other organism","type":"exact"}],"termid":"GO:0044500"}


id: PBO:0087339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Specific translational activator for the COX1 mRNA; binds to the COX1 mRNA; also influences stability of intron-containing COX1 primary transcripts; localizes to the mitochondrial inner membrane; contains 12 pentatricopeptide repeats (PPRs)","termid":"PBO:0087339"}


id: PBO:0036541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"midasin, Mdn1","termid":"PBO:0036541"}


id: PBO:0062698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily C member 4 pseudogene","termid":"PBO:0062698"}


id: PBO:0082005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM-type containing 5 pseudogene 1","termid":"PBO:0082005"}


id: FYPO:0004498
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which positive regulation of DNA-directed DNA polymerase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal regulation of catalytic activity","termid":"FYPO:0004920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal positive regulation of DNA-directed DNA polymerase activity","synonyms":[{"name":"normal positive regulation of DNA-directed DNA polymerase activity during mitotic cell cycle","type":"exact"},{"name":"normal positive regulation of DNA-directed DNA polymerase activity during vegetative growth","type":"exact"}],"termid":"FYPO:0004498"}


id: PBO:0041073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMP/retinoic acid inducible neural specific 2","termid":"PBO:0041073"}


id: PBO:0062498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily D member 2","termid":"PBO:0062498"}


id: PBO:0011980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family ATPase Rad57/Rhp57","termid":"PBO:0011980"}


id: GO:0033130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an acetylcholine receptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"acetylcholine receptor binding","termid":"GO:0033130"}


id: GO:0050273
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-succinylglutathione + H2O = glutathione + H+ + succinate.","definition_xrefs":["RHEA:16713","EC:3.1.2.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiolester hydrolase activity","termid":"GO:0016790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"S-succinylglutathione hydrolase activity","secondary_identifiers":["KEGG_REACTION:R00499","MetaCyc:S-SUCCINYLGLUTATHIONE-HYDROLASE-RXN"],"termid":"GO:0050273"}


id: GO:0010014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Initiation of a region of tissue in a plant that is composed of one or more undifferentiated cells capable of undergoing mitosis and differentiation, thereby effecting growth and development of a plant by giving rise to more meristem or specialized tissue.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"},{"relation_name":"part_of","term_name":"meristem structural organization","termid":"GO:0009933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meristem initiation","termid":"GO:0010014"}


id: PBO:0001908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLASP family microtubule-associated protein","termid":"PBO:0001908"}


id: GO:0043012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the binding and fusion of a sperm to the oocyte plasma membrane.","definition_xrefs":["PMID:11483596","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"is_a","term_name":"regulation of plasma membrane organization","termid":"GO:1903729"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"fusion of sperm to egg plasma membrane involved in single fertilization","termid":"GO:0007342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of fusion of sperm to egg plasma membrane","synonyms":[{"name":"regulation of sperm-oocyte fusion","type":"narrow"}],"termid":"GO:0043012"}


id: GO:0005340
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nucleotide-sulfate from one side of a membrane to the other.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfate transmembrane transporter activity","termid":"GO:0015116"},{"relation_name":"is_a","term_name":"nucleotide transmembrane transporter activity","termid":"GO:0015215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"nucleotide-sulfate transmembrane transporter activity","secondary_identifiers":["GO:0005341"],"synonyms":[{"name":"nucleotide-sulphate transporter activity","type":"exact"}],"termid":"GO:0005340"}


id: GO:0018012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The trimethylation of the N-terminal alanine of proteins to form the derivative peptidyl-N,N,N-trimethyl-L-alanine.","definition_xrefs":["RESID:AA0062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal peptidyl-alanine methylation","termid":"GO:0018011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-alanine trimethylation","termid":"GO:0018012"}


id: PBO:0056390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPKAPK5 antisense RNA 1","termid":"PBO:0056390"}


id: GO:0019519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pentitols, any alditol with a chain of five carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alditol metabolic process","termid":"GO:0019400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"pentitol metabolic process","synonyms":[{"name":"pentitol metabolism","type":"exact"}],"termid":"GO:0019519"}


id: PBO:0070651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 22","termid":"PBO:0070651"}


id: GO:1990205
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of catalyzing the conversion of taurine and alpha-ketoglutarate to sulfite, aminoacetaldehyde and succinate under sulfur or cysteine starvation conditions. Its expression is repressed by the presence of sulfate or cysteine. In E. coli it is a homodimer or homotetramer of the protein TauD.","definition_xrefs":["GOC:bhm","PMID:12741810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005829","GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"taurine dioxygenase complex","synonyms":[{"name":"2-aminoethanesulfonate dioxygenase complex","type":"exact"},{"name":"TauD complex","type":"narrow"},{"name":"alpha-ketoglutarate-dependent taurine dioxygenase complex","type":"exact"}],"termid":"GO:1990205"}


id: PBO:0085301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pheromone-responsive MAPK scaffold protein; couples activation of the G-protein-coupled pheromone receptor to MAPK activation; intramolecular interaction of PH and VWA domains blocks activation of assembled signaling cascade components (Ste11p, Ste7p and Fus3p) under basal conditions; Gbeta-gamma (Ste4p-Ste18p)-dependent docking at the plasma membrane and binding of PI(4,5)P2 by the PH domain relieves autoinhibition, resulting in pheromone-dependent pathway activation","termid":"PBO:0085301"}


id: PBO:0018080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain protein Pdp2 (predicted)","termid":"PBO:0018080"}


id: PBO:0050066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLTF antisense RNA 1","termid":"PBO:0050066"}


id: PBO:0085291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phenylacrylic acid decarboxylase; decarboxylates aromatic carboxylic acids to the corresponding vinyl derivatives; confers resistance to cinnamic acid; overexpression of both Pad1p and Fdc1p increases cinnamic acid decarboxylase activity due to the Pad1p-catalyzed formation of a diffusible cofactor required for Fdc1p activity; contains mRNA binding activity; homolog of E. coli UbiX","termid":"PBO:0085291"}


id: PBO:0027732
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_DNA_replication_initiation","termid":"PBO:0027732"}


id: PBO:0064488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit A","termid":"PBO:0064488"}


id: PBO:0109599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARB2 cotranscriptional regulator A","termid":"PBO:0109599"}


id: FYECO:0000147
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in defined medium containing sucrose, salts and water. May be supplemented with a set of amino acids as per the auxotrophic requirements of the strain.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sucrose MM","synonyms":[{"name":"sucrose minimal medium","type":"exact"}],"termid":"FYECO:0000147"}


id: PBO:0086127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for high temperature survival during stationary phase; not required for growth on nonfermentable carbon sources","termid":"PBO:0086127"}


id: GO:1900149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Schwann cell migration.","definition_xrefs":["GOC:sjw","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Schwann cell migration","termid":"GO:1900147"},{"relation_name":"is_a","term_name":"positive regulation of glial cell migration","termid":"GO:1903977"},{"relation_name":"positively_regulates","term_name":"Schwann cell migration","termid":"GO:0036135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of Schwann cell migration","synonyms":[{"name":"activation of Schwann cell migration","type":"narrow"},{"name":"up regulation of Schwann cell migration","type":"exact"},{"name":"up-regulation of Schwann cell migration","type":"exact"},{"name":"upregulation of Schwann cell migration","type":"exact"}],"termid":"GO:1900149"}


id: PBO:0003997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase zeta Rev7 (predicted)","termid":"PBO:0003997"}


id: GO:1901945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of miltiradiene.","definition_xrefs":["GOC:TermGenie","PMID:22027823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene catabolic process","termid":"GO:0046247"},{"relation_name":"is_a","term_name":"miltiradiene metabolic process","termid":"GO:1901944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"miltiradiene catabolic process","synonyms":[{"name":"miltiradiene breakdown","type":"exact"},{"name":"miltiradiene catabolism","type":"exact"},{"name":"miltiradiene degradation","type":"exact"}],"termid":"GO:1901945"}


id: PBO:0064264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and coiled-coil domain containing D1","termid":"PBO:0064264"}


id: RO:0002626
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in_a_biotic-biotic_interaction_with","termid":"RO:0002574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kills","termid":"RO:0002626"}


id: PATO:0000595
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A volume which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"increased size","termid":"PATO:0000586"},{"relation_name":"is_a","term_name":"volume","termid":"PATO:0000918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased volume","synonyms":[{"name":"high volume","type":"exact"},{"name":"large volume","type":"related"}],"termid":"PATO:0000595"}


id: PBO:0066640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal modification protein rimK like family member B pseudogene 1","termid":"PBO:0066640"}


id: PBO:0030066
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_phosphoglycerate_mutase_activity","termid":"PBO:0030066"}


id: FYPO:0001845
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which kinetochore organization is normal (i.e. indistinguishable from wild type). Kinetochore organization is the assembly, arrangement of constituent parts, or disassembly of kinetochores and their associated proteins.","definition_xrefs":["GO:0051383","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal kinetochore organization","synonyms":[{"name":"normal kinetochore organisation","type":"exact"},{"name":"normal kinetochore organization during mitotic cell cycle","type":"related"},{"name":"normal kinetochore organization during vegetative growth","type":"exact"}],"termid":"FYPO:0001845"}


id: PBO:0000612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMN family","termid":"PBO:0000612"}


id: PBO:0085765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase of unknown cellular role; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; interacts with rRNA transcription and ribosome biogenesis factors and the long chain fatty acyl-CoA synthetase Faa3p; FRK1 has a paralog, KIN4, that arose from the whole genome duplication","termid":"PBO:0085765"}


id: PBO:0034815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disease association, microcephalic primordial dwarfism","termid":"PBO:0034815"}


id: PBO:0027974
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cysteine-type_peptidase_activity","termid":"PBO:0027974"}


id: PBO:0079615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 K","termid":"PBO:0079615"}


id: PR:Q9UTG8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dad2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTG8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit dad2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.07c","synonyms":[{"name":"Spom972h-dad2","type":"exact"},{"name":"high osmolarity sensitivity protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"outer kinetochore protein dad2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTG8"}


id: PBO:0050719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 5","termid":"PBO:0050719"}


id: PBO:0054169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1541","termid":"PBO:0054169"}


id: PBO:0036111
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_targeting_during_vegetative_growth","termid":"PBO:0036111"}


id: GO:0002212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A behavioral response seeking to protect an organism from an a perceived external threat from a nematode or nematodes to that organism.","definition_xrefs":["GOC:add","PMID:14506883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral defense response","termid":"GO:0002209"},{"relation_name":"is_a","term_name":"defense response to nematode","termid":"GO:0002215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral defense response to nematode","synonyms":[{"name":"behavioural defense response to nematode","type":"exact"}],"termid":"GO:0002212"}


id: PBO:0030637
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_ATPase_activity","termid":"PBO:0030637"}


id: PBO:0058302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4676","termid":"PBO:0058302"}


id: PBO:0029882
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_at_silent_mating-type_cassette","termid":"PBO:0029882"}


id: FYPO:0002099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to hydroxyurea","synonyms":[{"name":"normal protein phosphorylation during cellular response to HU","type":"exact"},{"name":"normal protein phosphorylation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0002099"}


id: PBO:0052656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 24","termid":"PBO:0052656"}


id: GO:0042971
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of lactone from one side of a membrane to the other. A lactone is a cyclic ester of a hydroxy carboxylic acid, containing a 1-oxacycloalkan-2-one structure, or an analogue having unsaturation or heteroatoms replacing one or more carbon atoms of the ring.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete lactone transmembrane transporter activity (obsolete GO:0042971)","termid":"GO:0042971"}


id: GO:0140640
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id: PBO:0071361
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id: FYPO:0003567
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id: PBO:0051298
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id: GO:1904305
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id: GO:0033011
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id: PBO:0042317
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id: GO:0060604
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id: PBO:0011107
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id: GO:2000308
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id: GO:0018501
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id: PBO:0045411
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id: PBO:0005831
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id: PBO:0043489
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id: GO:1903921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein processing in phagocytic vesicle.","definition_xrefs":["GOC:als","GOC:TermGenie","GO_REF:0000058","PMID:23325791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein processing","termid":"GO:0070613"},{"relation_name":"regulates","term_name":"protein processing in phagocytic vesicle","termid":"GO:1900756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of protein processing in phagocytic vesicle","synonyms":[{"name":"regulation of peptidolysis during protein maturation in phagocytic vesicle","type":"related"},{"name":"regulation of peptidolysis during protein maturation in phagosome","type":"related"},{"name":"regulation of protein maturation by peptide bond cleavage in phagocytic vesicle","type":"exact"},{"name":"regulation of protein maturation by peptide bond cleavage in phagosome","type":"exact"},{"name":"regulation of protein maturation by peptide bond hydrolysis in phagocytic vesicle","type":"exact"},{"name":"regulation of protein maturation by peptide bond hydrolysis in phagosome","type":"exact"},{"name":"regulation of protein maturation by proteolysis in phagocytic vesicle","type":"related"},{"name":"regulation of protein maturation by proteolysis in phagosome","type":"related"},{"name":"regulation of protein processing in phagosome","type":"exact"}],"termid":"GO:1903921"}


id: SO:0001796
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved region within the central region of a modular centromere, where the kinetochore is formed.","definition_xrefs":["SO:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conserved_region","termid":"SO:0000330"},{"relation_name":"part_of","term_name":"regional_centromere","termid":"SO:0001795"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regional_centromere_central_core","synonyms":[{"name":"regional centromere central core","type":"exact"}],"termid":"SO:0001796"}


id: PBO:0062823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-sialoglycoprotein endopeptidase","termid":"PBO:0062823"}


id: GO:1902026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cartilage condensation.","definition_xrefs":["GOC:TermGenie","PMID:17202865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cartilage condensation","termid":"GO:0001502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cartilage condensation","termid":"GO:1902026"}


id: PBO:0081772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 704","termid":"PBO:0081772"}


id: PR:O94663
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar-sorting protein SNF8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12806:SF0","PRO:DNx","OMA:SCHPO02784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar-sorting protein dot2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.05c","secondary_identifiers":["UniProtKB:O94663"],"synonyms":[{"name":"ELL-associated protein of 30 kDa homolog dot2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SNF8","type":"exact"},{"name":"defective organization of telomere protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94663"}


id: PBO:0071960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase A1","termid":"PBO:0071960"}


id: PBO:0084800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function","termid":"PBO:0084800"}


id: GO:0031496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mating type switching.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mating type switching","termid":"GO:0031494"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"mating type switching","termid":"GO:0007533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mating type switching","synonyms":[{"name":"activation of mating type switching","type":"narrow"},{"name":"stimulation of mating type switching","type":"narrow"},{"name":"up regulation of mating type switching","type":"exact"},{"name":"up-regulation of mating type switching","type":"exact"},{"name":"upregulation of mating type switching","type":"exact"}],"termid":"GO:0031496"}


id: GO:0047152
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxybenzimidazolylcobamide + methanol = H2O + Co-methyl-Co-5-hydroxybenzimidazolylcob(I)amide.","definition_xrefs":["PMID:6438059","RHEA:45204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"methanol-5-hydroxybenzimidazolylcobamide Co-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.90-RXN","EC:2.1.1.90","GO:1990087"],"synonyms":[{"name":"MT 1","type":"related"},{"name":"MT1","type":"related"},{"name":"MtaB","type":"related"},{"name":"methanol cobalamin methyltransferase activity","type":"related"},{"name":"methanol-corrinoid protein Co-methyltransferase","type":"exact"},{"name":"methanol:5-hydroxybenzimidazolylcobamide Co-methyltransferase activity","type":"related"},{"name":"methanol:5-hydroxybenzimidazolylcobamide methyltransferase activity","type":"related"},{"name":"methanol:corrinoid methyltransferase activity","type":"exact"},{"name":"methyltransferase 1","type":"broad"}],"termid":"GO:0047152"}


id: GO:1901264
data:
  {"annotated_genes":["SJAG_03334","SJAG_03452","SJAG_01177","SJAG_04325","SJAG_00612","SJAG_02050","SJAG_00276","SJAG_01960","SJAG_04406","SJAG_04162","SJAG_00434","SJAG_02897","SJAG_00339","SJAG_03774","SJAG_04697"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[98919,106949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015866"},{"annotations":[106950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015867"},{"annotations":[89389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036085"},{"annotations":[85040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990570"},{"annotations":[90482,108617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034203"},{"annotations":[97412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[97413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[106951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[106952,98920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[86886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"},{"annotations":[108320,89155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035436"},{"annotations":[111636,84436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097624"},{"annotations":[111637,108434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072334"},{"annotations":[89156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015786"},{"annotations":[108435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120112"},{"annotations":[101026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990569"},{"annotations":[65800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015790"}]},"cv_name":"biological_process","definition":"The directed movement of a carbohydrate derivative into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_00339":null,"SJAG_00434":null,"SJAG_00612":null,"SJAG_01177":null,"SJAG_01960":null,"SJAG_02050":null,"SJAG_02897":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_03774":null,"SJAG_04162":null,"SJAG_04325":null,"SJAG_04406":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"carbohydrate derivative transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:1901264","terms_by_termid":{"GO:0015786":null,"GO:0015790":null,"GO:0015866":null,"GO:0015867":null,"GO:0034203":null,"GO:0035348":null,"GO:0035436":null,"GO:0036085":null,"GO:0072334":null,"GO:0097624":null,"GO:0120112":null,"GO:0140021":null,"GO:1990544":null,"GO:1990553":null,"GO:1990554":null,"GO:1990559":null,"GO:1990569":null,"GO:1990570":null}}


id: PBO:0038357
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_substance_removed","termid":"PBO:0038357"}


id: PBO:0034713
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by H. sapiens RAB6A","termid":"PBO:0034713"}


id: PBO:0028950
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_eisosome","termid":"PBO:0028950"}


id: GO:0106309
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + progesterone + reduced [NADPH--hemoprotein reductase] = 21-hydroxyprogesterone + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["PMID:25855791","RHEA:50304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid 21-monooxygenase activity","termid":"GO:0004509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"progesterone 21-hydroxylase activity","secondary_identifiers":["Reactome:R-HSA-193981","Reactome:R-HSA-193964"],"termid":"GO:0106309"}


id: GO:2000921
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of arabinoxylan-containing compound catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of xylan catabolic process","termid":"GO:2001000"},{"relation_name":"regulates","term_name":"arabinoxylan-containing compound catabolic process","termid":"GO:2000888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of arabinoxylan-containing compound catabolic process","synonyms":[{"name":"regulation of arabinoxylan catabolism","type":"exact"}],"termid":"GO:2000921"}


id: PBO:0066337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of chromosome condensation 2","termid":"PBO:0066337"}


id: GO:0071820
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an N-box, a DNA motif with the consensus sequence CACNAG that is found in the promoters of genes expressed preferentially at synapses.","definition_xrefs":["PMID:11498047","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0000976","GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"N-box binding","synonyms":[{"name":"N box binding","type":"exact"},{"name":"N-box promoter binding","type":"exact"}],"termid":"GO:0071820"}


id: GO:0035208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of hemocyte proliferation. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) that are involved in defense and clotting of hemolymph, but not involved in transport of oxygen. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of hemocyte proliferation","termid":"GO:0035206"},{"relation_name":"positively_regulates","term_name":"hemocyte proliferation","termid":"GO:0035172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hemocyte proliferation","synonyms":[{"name":"activation of hemocyte proliferation","type":"narrow"},{"name":"positive regulation of arthropod blood cell proliferation","type":"exact"},{"name":"stimulation of hemocyte proliferation","type":"narrow"},{"name":"up regulation of hemocyte proliferation","type":"exact"},{"name":"up-regulation of hemocyte proliferation","type":"exact"},{"name":"upregulation of hemocyte proliferation","type":"exact"}],"termid":"GO:0035208"}


id: PBO:0058656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6784","termid":"PBO:0058656"}


id: FYPO:0001175
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing maltose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002058","FYPO:0002060","FYPO:0000003","FYPO:0002057","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on maltose carbon source","synonyms":[{"name":"normal cell population growth on maltose carbon source","type":"exact"},{"name":"normal vegetative cell population growth on maltose carbon source","type":"exact"}],"termid":"FYPO:0001175"}


id: GO:0003122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vasodilation process resulting from secretion of norepinephrine into the bloodstream or released by nerve endings.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasodilation","termid":"GO:0042311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"norepinephrine-mediated vasodilation","secondary_identifiers":["GO:0003125","GO:0003126"],"synonyms":[{"name":"regulation of vasodilation by circulating noradrenaline","type":"related"},{"name":"regulation of vasodilation by circulating norepinephrine","type":"related"},{"name":"regulation of vasodilation by neuronal noradrenaline","type":"related"},{"name":"regulation of vasodilation by neuronal norepinephrine","type":"related"},{"name":"regulation of vasodilation by noradrenaline","type":"related"},{"name":"regulation of vasodilation by norepinephrine","type":"related"}],"termid":"GO:0003122"}


id: MOD:00702
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes atoms of particular common isotopes with atoms or groups containing isotopes that are not the most common.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isotope labeled residue","synonyms":[{"name":"IsoTagRes","type":"exact"},{"name":"SILAC","type":"exact"}],"termid":"MOD:00702"}


id: SO:1000089
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence variant at RNA level does not lead to any change in polypeptide.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000089 sequence_variant_causing_no_change_of_translational_product (obsolete SO:1000089)","synonyms":[{"name":"mutation causing no change of translational product","type":"related"},{"name":"sequence variant causing no change of translational product","type":"exact"}],"termid":"SO:1000089"}


id: PBO:0081445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 302","termid":"PBO:0081445"}


id: PBO:0001523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein Zym1","termid":"PBO:0001523"}


id: PBO:0049697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronan and proteoglycan link protein 3","termid":"PBO:0049697"}


id: GO:0010403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pectic arabinogalactan I, an alpha-(1,4)-linked D-galactopyranose backbone that is substituted with alpha-l-Araf residues via the O-3 of the D-galactose residues. Arabinogalactan I can be found as a side chain of rhamnogalacturonan I.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhamnogalacturonan I side chain metabolic process","termid":"GO:0010400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"pectic arabinogalactan I metabolic process","synonyms":[{"name":"pectic arabinogalactan I metabolism","type":"exact"}],"termid":"GO:0010403"}


id: PBO:0025540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-Q homolog Fta7","termid":"PBO:0025540"}


id: PBO:0002827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PQ loop protein","termid":"PBO:0002827"}


id: GO:0052910
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 S-adenosyl-L-methionine + adenine(2085) in 23S rRNA = 2 S-adenosyl-L-homocysteine + N(6)-dimethyladenine(2085) in 23S rRNA.","definition_xrefs":["EC:2.1.1.184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (adenine-N6-)-methyltransferase activity","termid":"GO:0008988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0140098","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"23S rRNA (adenine(2085)-N(6))-dimethyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11597","RHEA:42784"],"synonyms":[{"name":"ermC 23S rRNA methyltransferase activity","type":"related"},{"name":"rRNA methyltransferase ermC' activity","type":"related"},{"name":"rRNA:m(6)A methyltransferase ermC' activity","type":"related"}],"termid":"GO:0052910"}


id: GO:0018154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-protein cross-link between peptidyl-serine and peptidyl-cysteine by the synthesis of (2R,6R)-lanthionine (L-lanthionine).","definition_xrefs":["RESID:AA0110"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via (2R,6R)-lanthionine (obsolete GO:0018154)","termid":"GO:0018154"}


id: GO:0015171
data:
  {"annotated_genes":["SJAG_04637","SJAG_00015","SJAG_02941","SJAG_03400","SJAG_00543","SJAG_00522","SJAG_04957","SJAG_04787","SJAG_04725","SJAG_02947","SJAG_02062","SJAG_01770","SJAG_02113","SJAG_04984","SJAG_04588","SJAG_02955","SJAG_06598","SJAG_00149","SJAG_04296","SJAG_02133","SJAG_04718","SJAG_01994","SJAG_04295","SJAG_03899","SJAG_03829","SJAG_01998","SJAG_05342","SJAG_00019","SJAG_02150","SJAG_00626","SJAG_03256","SJAG_02144","SJAG_02029","SJAG_04903","SJAG_04135","SJAG_02946","SJAG_01096","SJAG_03827","SJAG_00051","SJAG_00877"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74466,75679,76357,83643,83644,83645,83646,83647,83648,83649,83650,83683,83684,83685,83686,85772,96085,99594,99834,102080,105481,105488,106645,109764,114325,114326,114327,114328,114329,114330,114331,114332,114424,114518,115073],"is_not":false,"summary":null,"term":"GO:0015171"},{"annotations":[86458,90652,91765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015174"},{"annotations":[109759,115076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033229"},{"annotations":[94290,96304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015187"},{"annotations":[92088],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034639"},{"annotations":[92089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015179"},{"annotations":[96423,93427,99907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061459"},{"annotations":[98868,106076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015182"},{"annotations":[92626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015183"},{"annotations":[92627,94291,99908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005313"},{"annotations":[99909,93428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005290"},{"annotations":[106077,98869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015188"},{"annotations":[98870,106078,99910,96424,93429],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015189"},{"annotations":[103961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000064"},{"annotations":[97273,96416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015193"},{"annotations":[99911,86675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015194"},{"annotations":[99912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005302"}]},"cv_name":"molecular_function","definition":"Enables the transfer of amino acids from one side of a membrane to the other. 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id: PBO:0047517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciculation and elongation protein zeta 2","termid":"PBO:0047517"}


id: GO:0110039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nematode male tail tip morphogenesis.","definition_xrefs":["PMID:28068334","GOC:rz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of nematode male tail tip morphogenesis","termid":"GO:0110037"},{"relation_name":"positively_regulates","term_name":"nematode male tail tip morphogenesis","termid":"GO:0045138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nematode male tail tip morphogenesis","termid":"GO:0110039"}


id: GO:0140455
data:
  {"annotated_genes":["SJAG_03794","SJAG_02419","SJAG_00552","SJAG_00173","SJAG_02341","SJAG_00436","SJAG_01556"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101039,114646],"is_not":false,"summary":null,"term":"GO:0140455"},{"annotations":[104057,105796,109688,106386,105692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071629"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of misfolded proteins in the cytoplasm, which are either targeted to cytoplasmic proteasomes for degradation or protected by chaperones to shield thermosensitive proteins from degradation until conditions allow disaggregation and refolding.","definition_xrefs":["PMID:32075773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein quality control for misfolded or incompletely synthesized proteins","termid":"GO:0006515"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00173":null,"SJAG_00436":null,"SJAG_00552":null,"SJAG_01556":null,"SJAG_02341":null,"SJAG_02419":null,"SJAG_03794":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"cytoplasm protein quality control","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140455","terms_by_termid":{"GO:0071629":null,"GO:0140455":null}}


id: FYPO:0001400
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, and morphology of cytoplasmic microtubules is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cytoplasmic microtubules during vegetative growth","termid":"FYPO:0001976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal interphase microtubules","synonyms":[{"name":"normal cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"normal interphase cytoplasmic microtubules","type":"exact"},{"name":"normal interphase microtubules during mitotic cell cycle","type":"related"},{"name":"normal interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0001400"}


id: GO:0006989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete unfolded protein response, ligation of mRNA encoding UFP-specific transcription factor by RNA ligase (obsolete GO:0006989)","synonyms":[{"name":"unfolded protein response, ligation of mRNA encoding UFP-specific transcription factor by RNA ligase","type":"exact"}],"termid":"GO:0006989"}


id: PBO:0059403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S33","termid":"PBO:0059403"}


id: PBO:0080726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WT1 interacting protein","termid":"PBO:0080726"}


id: PBO:0109194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitofissin Atg44","termid":"PBO:0109194"}


id: GO:0070415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving trehalose that occur as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.","definition_xrefs":["PMID:9797333","GOC:jp","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trehalose metabolism in response to stress","termid":"GO:0070413"},{"relation_name":"is_a","term_name":"cellular response to cold","termid":"GO:0070417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"trehalose metabolism in response to cold stress","synonyms":[{"name":"trehalose metabolic process involved in response to cold stress","type":"exact"}],"termid":"GO:0070415"}


id: PR:Q10438
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pby1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin--tyrosine ligase C12B10.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.04","synonyms":[{"name":"Spom972h-pby1","type":"exact"}],"termid":"PR:Q10438"}


id: PBO:0086540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YCR001W is not an essential gene","termid":"PBO:0086540"}


id: GO:0098784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the assembly, arrangement of constituent parts, or disassembly of a biofilm matrix.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"biofilm matrix organization","synonyms":[{"name":"biofilm matrix organization and biogenesis","type":"related"}],"termid":"GO:0098784"}


id: PBO:0045813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 3","termid":"PBO:0045813"}


id: PATO:0001995
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that inheres in an entire organism or part of an organism.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organismal quality","termid":"PATO:0001995"}


id: GO:0032147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the activity of an inactive protein kinase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein kinase activity","termid":"GO:0045860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of protein kinase activity","synonyms":[{"name":"protein kinase activation","type":"related"}],"termid":"GO:0032147"}


id: PBO:0062139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 6","termid":"PBO:0062139"}


id: PBO:0003275
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.4.3","termid":"PBO:0003275"}


id: PBO:0047908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, distamycin A type, rare, fra(8)(q24.1)","termid":"PBO:0047908"}


id: GO:0002143
data:
  {"annotated_genes":["SJAG_00358","SJAG_00186","SJAG_03896","SJAG_01302","SJAG_04113","SJAG_03932","SJAG_03616"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92051,101904,102930,104465,113273],"is_not":false,"summary":null,"term":"GO:0002143"},{"annotations":[90324,113037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"}]},"cv_name":"biological_process","definition":"The process in which a uridine residue at position 34 in the anticodon of a tRNA is post-transcriptionally thiolated at the C2 position. This process involves transfer of a sulfur from cysteine to position C2 by several steps.","definition_xrefs":["PMID:16871210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA wobble uridine modification","termid":"GO:0002098"},{"relation_name":"is_a","term_name":"tRNA thio-modification","termid":"GO:0034227"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00186":null,"SJAG_00358":null,"SJAG_01302":null,"SJAG_03616":null,"SJAG_03896":null,"SJAG_03932":null,"SJAG_04113":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006399"],"is_obsolete":false,"name":"tRNA wobble position uridine thiolation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tRNA wobble uridine thiolation","type":"exact"},{"name":"wobble position s2U biosynthesis","type":"exact"}],"termid":"GO:0002143","terms_by_termid":{"GO:0002143":null,"GO:1990799":null}}


id: GO:0051114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The uridylylation of peptidyl-histidine to form peptidyl-1'-(phospho-5'-uridine)-L-histidine (otherwise known as tau-UMP-histidine, tele-UMP-histidine) or peptidyl-3'-(phospho-5'-uridine)-L-histidine (otherwise known as pi-UMP-histidine, pros-UMP-histidine).","definition_xrefs":["RESID:AA0372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein uridylylation","termid":"GO:0018177"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-histidine uridylylation","termid":"GO:0051114"}


id: FYPO:0000336
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04280:allele-1":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[115297],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[115312,115686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[115284],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[115252,115597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[115298],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of cellular component assembly at the cellular level is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization","termid":"FYPO:0000335"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_04280":null,"SJAG_04522":null},"genotype_count":6,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-1","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_01143","SJAG_04522","SJAG_04280"],"name":"abnormal cellular component assembly","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:30664646":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_01143","SJAG_02392","SJAG_04522"],"single_locus_genotype_uniquenames":["mid1delta","sty1delta","pom1delta","rga4delta"],"synonyms":[{"name":"abnormal cellular component assembly at cellular level","type":"exact"}],"termid":"FYPO:0000336","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0062048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 35","termid":"PBO:0062048"}


id: GO:2000340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chemokine (C-X-C motif) ligand 1 production.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of chemokine (C-X-C motif) ligand 1 production","termid":"GO:2000338"},{"relation_name":"positively_regulates","term_name":"chemokine (C-X-C motif) ligand 1 production","termid":"GO:0072566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of chemokine (C-X-C motif) ligand 1 production","synonyms":[{"name":"positive regulation of CXCL1 production","type":"exact"},{"name":"positive regulation of KC production","type":"exact"},{"name":"positive regulation of SCYB1 production","type":"exact"},{"name":"positive regulation of keratinocyte derived chemokine production","type":"exact"}],"termid":"GO:2000340"}


id: PBO:0084426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major of three pyruvate decarboxylase isozymes; key enzyme in alcoholic fermentation; decarboxylates pyruvate to acetaldehyde; involved in amino acid catabolism; subject to glucose-, ethanol-, and autoregulation; activated by phosphorylation in response to glucose levels; N-terminally propionylated in vivo","termid":"PBO:0084426"}


id: GO:0018547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the removal of one or more nitrite (NO2-) groups from nitroglycerin or a derivative.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete nitroglycerin reductase activity (obsolete GO:0018547)","secondary_identifiers":["Reactome:R-HSA-9620103"],"synonyms":[{"name":"NG reductase activity","type":"exact"}],"termid":"GO:0018547"}


id: PBO:0059512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded replication primer","termid":"PBO:0059512"}


id: PBO:0045769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular matrix protein 1","termid":"PBO:0045769"}


id: GO:0035653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a macromolecular complex between proteins of the AP-1 adaptor complex and proteins and/or lipoproteins that are going to be transported by a clathrin-coated vesicle. The AP-1 adaptor protein complex is a component of the cytoplasmic coat found on clathrin-coated vesicles, and binds to sorting signals of cargo to facilitate their trafficking.","definition_xrefs":["PMID:12802059","GOC:lb","PMID:16162817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin-coated vesicle cargo loading","termid":"GO:0035652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"clathrin-coated vesicle cargo loading, AP-1-mediated","synonyms":[{"name":"cargo loading into clathrin-coated vesicle, AP-1-mediated","type":"exact"}],"termid":"GO:0035653"}


id: PR:O13807
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA damage-binding protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10644:SF3","OMA:SCHPO00829","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage-binding protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.10c","secondary_identifiers":["UniProtKB:O13807"],"synonyms":[{"name":"Spom972h-DDB1","type":"exact"},{"name":"damage-specific DNA-binding protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13807"}


id: PBO:0075395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sp8 transcription factor","termid":"PBO:0075395"}


id: GO:0080018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an anthocyanin + UDP-D-glucose = an anthocyanin-5-O-glucoside + UDP.","definition_xrefs":["PMID:15807784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"anthocyanin 5-O-glucosyltransferase activity","termid":"GO:0080018"}


id: PATO:0002112
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's having a hole or holes, especially a row or array of small holes.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure, cavities","termid":"PATO:0002014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perforate","secondary_identifiers":["PATO:0000649"],"synonyms":[{"name":"permeable","type":"related"},{"name":"pierced","type":"related"}],"termid":"PATO:0002112"}


id: GO:0046645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gamma-delta T cell activation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell activation","termid":"GO:0046643"},{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"},{"relation_name":"positively_regulates","term_name":"gamma-delta T cell activation","termid":"GO:0046629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of gamma-delta T cell activation","synonyms":[{"name":"activation of gamma-delta T cell activation","type":"narrow"},{"name":"positive regulation of gamma-delta T lymphocyte activation","type":"exact"},{"name":"positive regulation of gamma-delta T-cell activation","type":"exact"},{"name":"positive regulation of gamma-delta T-lymphocyte activation","type":"exact"},{"name":"stimulation of gamma-delta T cell activation","type":"narrow"},{"name":"up regulation of gamma-delta T cell activation","type":"exact"},{"name":"up-regulation of gamma-delta T cell activation","type":"exact"},{"name":"upregulation of gamma-delta T cell activation","type":"exact"}],"termid":"GO:0046645"}


id: GO:1990705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cholangiocytes, resulting in the expansion of the cholangiocyte population. A cholangiocyte is an epithelial cell that is part of the bile duct. Cholangiocytes contribute to bile secretion via net release of bicarbonate and water.","definition_xrefs":["PMID:24434010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cholangiocyte proliferation","synonyms":[{"name":"hepatoblast proliferation","type":"exact"}],"termid":"GO:1990705"}


id: GO:1904065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any G protein-coupled acetylcholine receptor signaling pathway that is involved in positive regulation of acetylcholine secretion, neurotransmission.","definition_xrefs":["GOC:kmv","GOC:TermGenie","GO_REF:0000060","PMID:22588719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled acetylcholine receptor signaling pathway","termid":"GO:0007213"},{"relation_name":"part_of","term_name":"positive regulation of acetylcholine secretion, neurotransmission","termid":"GO:0014057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"G protein-coupled acetylcholine receptor signaling pathway involved in positive regulation of acetylcholine secretion, neurotransmission","synonyms":[{"name":"G-protein coupled acetylcholine receptor signaling pathway involved in activation of acetylcholine secretion","type":"narrow"},{"name":"G-protein coupled acetylcholine receptor signaling pathway involved in positive regulation of acetylcholine secretion, neurotransmission","type":"exact"},{"name":"G-protein coupled acetylcholine receptor signaling pathway involved in stimulation of acetylcholine secretion","type":"narrow"},{"name":"G-protein coupled acetylcholine receptor signaling pathway involved in up regulation of acetylcholine secretion","type":"exact"},{"name":"G-protein coupled acetylcholine receptor signaling pathway involved in up-regulation of acetylcholine secretion","type":"exact"},{"name":"G-protein coupled acetylcholine receptor signaling pathway involved in upregulation of acetylcholine secretion","type":"exact"},{"name":"acetylcholine receptor signalling, muscarinic pathway involved in activation of acetylcholine secretion","type":"narrow"},{"name":"acetylcholine receptor signalling, muscarinic pathway involved in positive regulation of acetylcholine secretion, neurotransmission","type":"exact"},{"name":"acetylcholine receptor signalling, muscarinic pathway involved in stimulation of acetylcholine secretion","type":"narrow"},{"name":"acetylcholine receptor signalling, muscarinic pathway involved in up regulation of acetylcholine secretion","type":"exact"},{"name":"acetylcholine receptor signalling, muscarinic pathway involved in up-regulation of acetylcholine secretion","type":"exact"},{"name":"acetylcholine receptor signalling, muscarinic pathway involved in upregulation of acetylcholine secretion","type":"exact"},{"name":"muscarinic acetylcholine receptor signaling pathway involved in activation of acetylcholine secretion","type":"narrow"},{"name":"muscarinic acetylcholine receptor signaling pathway involved in positive regulation of acetylcholine secretion, neurotransmission","type":"exact"},{"name":"muscarinic acetylcholine receptor signaling pathway involved in stimulation of acetylcholine secretion","type":"narrow"},{"name":"muscarinic acetylcholine receptor signaling pathway involved in up regulation of acetylcholine secretion","type":"exact"},{"name":"muscarinic acetylcholine receptor signaling pathway involved in up-regulation of acetylcholine secretion","type":"exact"},{"name":"muscarinic acetylcholine receptor signaling pathway involved in upregulation of acetylcholine secretion","type":"exact"}],"termid":"GO:1904065"}


id: FYPO:0001077
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a polysaccharide measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal polysaccharide level","synonyms":[{"name":"normal polysaccharide accumulation","type":"related"},{"name":"normal polysaccharide level during mitotic cell cycle","type":"related"},{"name":"normal polysaccharide level during vegetative growth","type":"exact"}],"termid":"FYPO:0001077"}


id: PBO:0062079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 10 pseudogene","termid":"PBO:0062079"}


id: PBO:0053318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 52","termid":"PBO:0053318"}


id: GO:0090011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell and ending with a change in transcription of target genes that contribute to the formation of the primitive streak.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete Wnt signaling pathway involved in primitive streak formation (obsolete GO:0090011)","synonyms":[{"name":"Wnt receptor signaling pathway involved in primitive streak formation","type":"exact"},{"name":"Wnt receptor signalling pathway involved in primitive streak formation","type":"exact"},{"name":"Wnt-activated signaling pathway involved in primitive streak formation","type":"exact"}],"termid":"GO:0090011"}


id: SO:0000354
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of intronic nucleotide sequence targeted by a nuclease enzyme.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease_sensitive_site","termid":"SO:0000684"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"group_1_intron_homing_endonuclease_target_region","synonyms":[{"name":"group 1 intron homing endonuclease target region","type":"exact"}],"termid":"SO:0000354"}


id: GO:0046207
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of trypanothione (N1,N6,-bis(glutathionyl)spermidine), an essential redox intermediate in intracellular thiol redox regulation which also plays a role in protecting against oxidative stress.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trypanothione metabolic process","termid":"GO:0046206"},{"relation_name":"is_a","term_name":"glutathione derivative catabolic process","termid":"GO:1901686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"trypanothione catabolic process","synonyms":[{"name":"trypanothione breakdown","type":"exact"},{"name":"trypanothione catabolism","type":"exact"},{"name":"trypanothione degradation","type":"exact"}],"termid":"GO:0046207"}


id: GO:0042488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the formation and development of teeth, the hard, bony appendages that are borne on the jaws, or on other bones in the walls of the mouth or pharynx of most vertebrates.","definition_xrefs":["PMID:15355794","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of odontogenesis","termid":"GO:0042482"},{"relation_name":"is_a","term_name":"regulation of odontogenesis of dentin-containing tooth","termid":"GO:0042487"},{"relation_name":"positively_regulates","term_name":"odontogenesis of dentin-containing tooth","termid":"GO:0042475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of odontogenesis of dentin-containing tooth","synonyms":[{"name":"activation of odontogenesis","type":"broad"},{"name":"positive regulation of odontogenesis of dentine-containing teeth","type":"exact"},{"name":"positive regulation of odontogenesis of dentine-containing tooth","type":"related"},{"name":"stimulation of odontogenesis","type":"broad"},{"name":"up regulation of odontogenesis","type":"broad"},{"name":"up-regulation of odontogenesis","type":"broad"},{"name":"upregulation of odontogenesis","type":"broad"}],"termid":"GO:0042488"}


id: PBO:0062226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AW member 1 pseudogene","termid":"PBO:0062226"}


id: GO:1902823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of late endosome to lysosome transport.","definition_xrefs":["GOC:PARL","GOC:pad","PMID:23949442","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of late endosome to lysosome transport","termid":"GO:1902822"},{"relation_name":"is_a","term_name":"negative regulation of vacuolar transport","termid":"GO:1903336"},{"relation_name":"negatively_regulates","term_name":"late endosome to lysosome transport","termid":"GO:1902774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of late endosome to lysosome transport","synonyms":[{"name":"down regulation of late endosome to lysosome transport","type":"exact"},{"name":"down-regulation of late endosome to lysosome transport","type":"exact"},{"name":"downregulation of late endosome to lysosome transport","type":"exact"},{"name":"inhibition of late endosome to lysosome transport","type":"narrow"}],"termid":"GO:1902823"}


id: PBO:0039968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 3","termid":"PBO:0039968"}


id: GO:0010066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the primary meristem or meristematic tissue that gives rise to the ground tissues.","definition_xrefs":["ISBN:0471245208","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary meristem tissue development","termid":"GO:0010065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ground meristem histogenesis","termid":"GO:0010066"}


id: PBO:0114274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin family protein (FoldSeek), possible PF15874 family (Pfam-N)","termid":"PBO:0114274"}


id: PBO:0075880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3GAL5 pseudogene 1","termid":"PBO:0075880"}


id: GO:0009146
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine nucleoside triphosphate, a compound consisting of a purine base linked to a ribose or deoxyribose sugar esterified with triphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate catabolic process","termid":"GO:0009143"},{"relation_name":"is_a","term_name":"purine nucleoside triphosphate metabolic process","termid":"GO:0009144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine nucleoside triphosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine nucleoside triphosphate breakdown","type":"exact"},{"name":"purine nucleoside triphosphate catabolism","type":"exact"},{"name":"purine nucleoside triphosphate degradation","type":"exact"}],"termid":"GO:0009146","terms_by_termid":{"GO:0035863":null}}


id: SO:0000331
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Short (typically a few hundred base pairs) DNA sequence that has a single occurrence in a genome and whose location and base sequence are known.","direct_ancestors":[{"relation_name":"is_a","term_name":"tag","termid":"SO:0000324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STS","synonyms":[{"name":"INSDC_feature:STS","type":"exact"},{"name":"sequence tag site","type":"exact"}],"termid":"SO:0000331"}


id: PBO:0113069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of U1 snRNP required for mRNA splicing via spliceosome; substrate of arginine methyltransferase Hmt1p; may interact with poly(A) polymerase to regulate polyadenylation; homolog of human U1-70K, which has been linked to several types of autoimmune and neurodegenerative diseases","termid":"PBO:0113069"}


id: GO:0045501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the sevenless signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of R7 cell differentiation","termid":"GO:0045676"},{"relation_name":"regulates","term_name":"sevenless signaling pathway","termid":"GO:0045500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of sevenless signaling pathway","synonyms":[{"name":"regulation of sev signaling pathway","type":"exact"},{"name":"regulation of sevenless signalling pathway","type":"exact"}],"termid":"GO:0045501"}


id: GO:0002485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex following intracellular transport via a TAP-dependent ER pathway. The peptide is typically a fragment of a larger endogenous protein which has been degraded within the cell and becomes associated with the MHC class I molecule in the ER following TAP-dependent transport from the cytosol. Class I here refers to classical class I molecules.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:14647477","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway","termid":"GO:0002484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent","synonyms":[{"name":"TAP-dependent antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway","type":"exact"},{"name":"TAP-dependent endogenous peptide antigen processing and presentation via MHC class I via ER pathway","type":"exact"},{"name":"endogenous peptide antigen processing and presentation via MHC class I via ER pathway, TAP-dependent","type":"exact"}],"termid":"GO:0002485"}


id: PBO:0073717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phase kinase associated protein 2","termid":"PBO:0073717"}


id: PBO:0038597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA dehydrogenase short/branched chain","termid":"PBO:0038597"}


id: GO:0102637
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-ammoniolevulinate + coenzyme A + ATP = 5-aminolevulinyl-CoA + AMP + diphosphoric acid.","definition_xrefs":["EC:6.2.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"5-aminolevulinate-CoA ligase activity","secondary_identifiers":["MetaCyc:RXN-15714"],"termid":"GO:0102637"}


id: PBO:0000327
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cornelia de Lange syndrome","termid":"PBO:0000327"}


id: FYPO:0001429
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell has a larger volume, greater length, greater diameter, and greater length:diameter ratio than normal.","definition_xrefs":["PomBase:mah","PMID:10388806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen cell","termid":"FYPO:0000025"},{"relation_name":"is_a","term_name":"increased cell length","termid":"FYPO:0006633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"swollen elongated cell","synonyms":[{"name":"elongated cell with increased cell volume","type":"exact"},{"name":"enlarged elongated cell","type":"related"},{"name":"large elongated cell","type":"related"}],"termid":"FYPO:0001429"}


id: PBO:0016070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic mRNA processing body, zf-CCHC type zinc finger protein (predicted)","termid":"PBO:0016070"}


id: SO:0000637
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A plasmid that is engineered.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"engineered","termid":"SO:0000783"},{"relation_name":"is_a","term_name":"plasmid","termid":"SO:0000155"},{"relation_name":"is_a","term_name":"engineered_region","termid":"SO:0000804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engineered_plasmid","synonyms":[{"name":"engineered plasmid","type":"exact"},{"name":"engineered plasmid gene","type":"related"}],"termid":"SO:0000637"}


id: PBO:0089491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta-1-pyrroline-5-carboxylate dehydrogenase Put2","termid":"PBO:0089491"}


id: GO:0001970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the activation of the membrane attack complex components of the complement cascade.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of activation of membrane attack complex","termid":"GO:0001969"},{"relation_name":"is_a","term_name":"positive regulation of complement activation","termid":"GO:0045917"},{"relation_name":"positively_regulates","term_name":"activation of membrane attack complex","termid":"GO:0001905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of activation of membrane attack complex","synonyms":[{"name":"activation of activation of membrane attack complex","type":"narrow"},{"name":"positive regulation of MAC assembly","type":"exact"},{"name":"positive regulation of MAC formation","type":"exact"},{"name":"positive regulation of activation of MAC","type":"exact"},{"name":"positive regulation of activation of TCC","type":"narrow"},{"name":"positive regulation of activation of terminal complement complex","type":"narrow"},{"name":"positive regulation of activation of the terminal complement cascade","type":"narrow"},{"name":"positive regulation of membrane attack complex assembly","type":"exact"},{"name":"positive regulation of membrane attack complex formation","type":"exact"},{"name":"stimulation of activation of membrane attack complex","type":"narrow"},{"name":"up regulation of activation of membrane attack complex","type":"exact"},{"name":"up-regulation of activation of membrane attack complex","type":"exact"},{"name":"upregulation of activation of membrane attack complex","type":"exact"}],"termid":"GO:0001970"}


id: PBO:0057353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR548A1 host gene","termid":"PBO:0057353"}


id: GO:1902650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H2A-H2B dimer displacement.","definition_xrefs":["GO_REF:0000058","PMID:22199252","GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H2A-H2B dimer displacement (obsolete GO:1902650)","synonyms":[{"name":"down regulation of histone H2A-H2B dimer displacement","type":"exact"},{"name":"down-regulation of histone H2A-H2B dimer displacement","type":"exact"},{"name":"downregulation of histone H2A-H2B dimer displacement","type":"exact"},{"name":"inhibition of histone H2A-H2B dimer displacement","type":"narrow"}],"termid":"GO:1902650"}


id: PBO:0000882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bfr1 binding protein ortholog Sos7","termid":"PBO:0000882"}


id: GO:0080028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a nitrile, an organic compound containing trivalent nitrogen attached to one carbon atom.","definition_xrefs":["PMID:18987211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"nitrile metabolic process","termid":"GO:0050898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitrile biosynthetic process","termid":"GO:0080028"}


id: GO:0033405
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UCU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0060090","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"UCU codon-amino acid adaptor activity","synonyms":[{"name":"TCT codon-amino acid adaptor activity","type":"exact"},{"name":"serine tRNA","type":"related"}],"termid":"GO:0033405"}


id: PBO:0078501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon TAT) 3-1","termid":"PBO:0078501"}


id: PBO:0028935
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_tryptone","termid":"PBO:0028935"}


id: PBO:0000501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human C9orf78 ortholog","termid":"PBO:0000501"}


id: MOD:01663
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-(ADP-ribosyl)-L-threonine.","definition_xrefs":["PubMed:20185726","RESID:AA0519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(ADP-ribosyl)-L-threonine","synonyms":[{"name":"(S)-2-amino-3-([adenosine 5'-(trihydrogen diphosphate) 5'->5'-ester with alpha-D-ribofuranosyl]oxy)-butanoic acid","type":"exact"},{"name":"O-(ADP-ribosyl)-L-threonine","type":"exact"},{"name":"O3-(ADP-ribosyl)-L-threonine","type":"exact"},{"name":"O3-[alpha-D-ribofuranoside 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)]-L-threonine","type":"exact"},{"name":"O3-alpha-D-ribofuranosyl-L-threonine 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)","type":"exact"}],"termid":"MOD:01663"}


id: PBO:0090289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain RNA binding protein, vigilin","termid":"PBO:0090289"}


id: PBO:0050746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 8","termid":"PBO:0050746"}


id: PBO:0113266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoinositide-binding regulator of ergosterol distribution; contains PX (Phox homology) domain; associated with ER-lipid droplet contact site; may facilitate ergosterol transport between plasma membrane and lipid droplets","termid":"PBO:0113266"}


id: GO:0008235
data:
  {"annotated_genes":["SJAG_03022","SJAG_02033","SJAG_00451","SJAG_03009","SJAG_01896","SJAG_00181","SJAG_04858","SJAG_01088","SJAG_04103","SJAG_06636","SJAG_03744","SJAG_03586","SJAG_01542","SJAG_00969"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110277,112274],"is_not":false,"summary":null,"term":"GO:0008235"},{"annotations":[93905,106095,84314,89446,84568,110517,101804,99353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070006"},{"annotations":[90528,73132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004181"},{"annotations":[92808,98324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070573"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallopeptidase activity","termid":"GO:0008237"},{"relation_name":"is_a","term_name":"exopeptidase activity","termid":"GO:0008238"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00181":null,"SJAG_00451":null,"SJAG_00969":null,"SJAG_01088":null,"SJAG_01542":null,"SJAG_01896":null,"SJAG_02033":null,"SJAG_03009":null,"SJAG_03022":null,"SJAG_03586":null,"SJAG_03744":null,"SJAG_04103":null,"SJAG_04858":null,"SJAG_06636":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0003824","GO:0008233","GO:0016787"],"is_obsolete":false,"name":"metalloexopeptidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0008235","terms_by_termid":{"GO:0004181":null,"GO:0008235":null,"GO:0070006":null,"GO:0070573":null}}


id: GO:0001072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to RNA, typically within the nascent RNA transcript, to promote readthrough of a transcription termination site and thus extending the length of the RNA transcript produced. Examples of antitermination factors which bind the nascent RNA include the lambda N protein and the HIV-1 tat protein.","definition_xrefs":["GOC:txnOH","PMID:8332211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator activity","termid":"GO:0140110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140110"}],"interesting_parent_ids":["GO:0003674","GO:0140110"],"is_obsolete":false,"name":"transcription antitermination factor activity, RNA binding","synonyms":[{"name":"RNA binding transcription antitermination factor activity","type":"exact"}],"termid":"GO:0001072"}


id: PBO:0083388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps HAC1/YFL031W; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0083388"}


id: GO:1990069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of opening of stomata, pores in the epidermis of leaves and stems bordered by two guard cells and serving in gas exchange.","definition_xrefs":["PMID:21749899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomatal movement","termid":"GO:0010118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomatal opening","termid":"GO:1990069"}


id: PBO:0074078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A51 pseudogene 2","termid":"PBO:0074078"}


id: PBO:0058233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4522","termid":"PBO:0058233"}


id: PBO:0043767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase copper chaperone COX17","termid":"PBO:0043767"}


id: PBO:0028342
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_post-anaphase_array_morphology","termid":"PBO:0028342"}


id: PBO:0070902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 10","termid":"PBO:0070902"}


id: SO:0000063
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An interchromosomal transposition whereby a translocation in which one of the four broken ends loses a segment before re-joining.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interchromosomal_transposition","termid":"SO:1000155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deficient_interchromosomal_transposition","synonyms":[{"name":"deficient interchromosomal transposition","type":"exact"}],"termid":"SO:0000063"}


id: PBO:0017825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule-site clamp monopolin complex subunit Csm1/Pcs1","termid":"PBO:0017825"}


id: PBO:0083594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a protein, based on available experimental and comparative sequence data; YAR070C has a paralog, YHR214C-B, that arose from a segmental duplication","termid":"PBO:0083594"}


id: PBO:0060982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NGFR antisense RNA 1","termid":"PBO:0060982"}


id: PBO:0057535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 651","termid":"PBO:0057535"}


id: MOD:00020
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-leucine.","definition_xrefs":["RESID:AA0011","DeltaMass:0","PubMed:6692818","PubMed:11478885","ChEBI:30006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 113.084064 Da","termid":"MOD:00306"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-leucine residue","synonyms":[{"name":"(2S)-2-amino-4-methylpentanoic acid","type":"exact"},{"name":"2-azanyl-4-methylpentanoic acid","type":"exact"},{"name":"4-methyl-norvaline","type":"exact"},{"name":"L-leucine","type":"exact"},{"name":"Leu","type":"exact"},{"name":"alpha-amino-gamma-methylvaleric acid","type":"exact"},{"name":"alpha-aminoisocaproic acid","type":"exact"}],"termid":"MOD:00020"}


id: PBO:0057471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 589","termid":"PBO:0057471"}


id: GO:0044450
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a microtubule organizing center, a region in a eukaryotic cell, such as a centrosome or basal body, from which microtubules grow.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete microtubule organizing center part (obsolete GO:0044450)","synonyms":[{"name":"MTOC component","type":"exact"},{"name":"microtubule organizing centre component","type":"exact"}],"termid":"GO:0044450"}


id: PR:Q9UUJ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An actin-related protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11937:SF37","PRO:DNx","OMA:SCHPO01984"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-related protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11H11.06","secondary_identifiers":["UniProtKB:Q9UUJ1"],"synonyms":[{"name":"Spom972h-ACTR2","type":"exact"},{"name":"actin-like protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUJ1"}


id: GO:0097014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"All of the contents of a cilium, excluding the plasma membrane surrounding the cilium.","definition_xrefs":["GOC:cilia","GOC:BHF","PMID:17895364","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection cytoplasm","termid":"GO:0032838"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"ciliary plasm","synonyms":[{"name":"cilial cytoplasm","type":"related"},{"name":"ciliary cytoplasm","type":"related"},{"name":"cilium cytoplasm","type":"related"},{"name":"cilium plasm","type":"exact"},{"name":"microtubule-based flagellar cytoplasm","type":"related"},{"name":"microtubule-based flagellar matrix","type":"narrow"},{"name":"microtubule-based flagellum cytoplasm","type":"related"},{"name":"microtubule-based flagellum matrix","type":"narrow"}],"termid":"GO:0097014"}


id: FYPO:0008060
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to a ubiquitin monomer is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:16138082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein-protein interaction","termid":"FYPO:0000703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000702","FYPO:0000652"],"is_obsolete":false,"name":"normal mono ubiquitin binding","termid":"FYPO:0008060"}


id: PBO:0057389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548c","termid":"PBO:0057389"}


id: GO:1902225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of acrosome reaction.","definition_xrefs":["PMID:23430248","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acrosome reaction","termid":"GO:0060046"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"acrosome reaction","termid":"GO:0007340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of acrosome reaction","synonyms":[{"name":"down regulation of acrosome reaction","type":"exact"},{"name":"down-regulation of acrosome reaction","type":"exact"},{"name":"downregulation of acrosome reaction","type":"exact"},{"name":"inhibition of acrosome reaction","type":"narrow"}],"termid":"GO:1902225"}


id: PBO:0035898
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_anaerobic_cell_population_growth","termid":"PBO:0035898"}


id: GO:0046244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of salicylic acid (2-hydroxybenzoic acid), a derivative of benzoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salicylic acid metabolic process","termid":"GO:0009696"},{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"salicylic acid catabolic process","synonyms":[{"name":"salicylic acid breakdown","type":"exact"},{"name":"salicylic acid catabolism","type":"exact"},{"name":"salicylic acid degradation","type":"exact"}],"termid":"GO:0046244"}


id: PBO:0042304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD19 molecule","termid":"PBO:0042304"}


id: PBO:0112753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase 3, Agm3","termid":"PBO:0112753"}


id: PBO:0050089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group AT-hook 2","termid":"PBO:0050089"}


id: GO:0044487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of the transmission of nerve impulses in the bitten organism.","definition_xrefs":["GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in modulation of process in another organism","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in modulation of transmission of nerve impulse in another organism","synonyms":[{"name":"envenomation resulting in modulation of conduction of nerve impulse in other organism","type":"exact"},{"name":"envenomation resulting in modulation of transmission of nerve impulse in other organism","type":"exact"}],"termid":"GO:0044487"}


id: GO:0048794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the swim bladder over time, from its formation to the mature structure. The swim bladder is used by some fishes to maintain buoyancy and may function in addition as a sound producing organ, a sound receptor, and a respiratory organ.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"swim bladder development","synonyms":[{"name":"gas bladder development","type":"exact"}],"termid":"GO:0048794"}


id: PBO:0004600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin exportin T Los1 (predicted)","termid":"PBO:0004600"}


id: PBO:0049793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HCK proto-oncogene, Src family tyrosine kinase","termid":"PBO:0049793"}


id: GO:0003959
data:
  {"annotated_genes":["SJAG_05015"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103115],"is_not":false,"summary":null,"term":"GO:0003959"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + acceptor = NADP+ + reduced acceptor.","definition_xrefs":["RHEA:13149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05015":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"NADPH dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0016660","EC:1.6.99.1","MetaCyc:NADPH-DEHYDROGENASE-RXN","Reactome:R-HSA-9018901","Reactome:R-HSA-9027625","Reactome:R-HSA-9027631","GO:0008468","Reactome:R-HSA-9018867","Reactome:R-HSA-9027632"],"synonyms":[{"name":"NADPH diaphorase activity","type":"related"},{"name":"NADPH-dehydrogenase activity","type":"related"},{"name":"NADPH2 diaphorase activity","type":"related"},{"name":"NADPH2-dehydrogenase activity","type":"related"},{"name":"NADPH:(acceptor) oxidoreductase activity","type":"related"},{"name":"NADPH:acceptor oxidoreductase activity","type":"related"},{"name":"OYE","type":"related"},{"name":"TPNH dehydrogenase activity","type":"related"},{"name":"TPNH-diaphorase activity","type":"related"},{"name":"dihydronicotinamide adenine dinucleotide phosphate dehydrogenase activity","type":"related"},{"name":"old yellow enzyme","type":"related"},{"name":"reduced nicotinamide adenine dinucleotide phosphate dehydrogenase activity","type":"related"},{"name":"triphosphopyridine diaphorase activity","type":"related"},{"name":"triphosphopyridine nucleotide diaphorase activity","type":"related"}],"termid":"GO:0003959","terms_by_termid":{"GO:0003959":null}}


id: PBO:0004939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase Spi1","termid":"PBO:0004939"}


id: PBO:0001582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine aldolase Gly1 (predicted)","termid":"PBO:0001582"}


id: GO:0003796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the beta-(1->4) linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues in a peptidoglycan.","definition_xrefs":["EC:3.2.1.17","PMID:22748813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"},{"relation_name":"is_a","term_name":"peptidoglycan muralytic activity","termid":"GO:0061783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"lysozyme activity","secondary_identifiers":["MetaCyc:3.2.1.17-RXN","Reactome:R-HSA-8862320"],"synonyms":[{"name":"1,4-N-acetylmuramidase activity","type":"exact"},{"name":"L-7001","type":"related"},{"name":"N,O-diacetylmuramidase activity","type":"exact"},{"name":"PR1-lysozyme","type":"related"},{"name":"globulin G","type":"related"},{"name":"globulin G1","type":"related"},{"name":"lysozyme g","type":"related"},{"name":"mucopeptide N-acetylmuramoylhydrolase activity","type":"exact"},{"name":"mucopeptide glucohydrolase activity","type":"exact"},{"name":"muramidase activity","type":"exact"},{"name":"peptidoglycan N-acetylmuramoylhydrolase activity","type":"related"}],"termid":"GO:0003796"}


id: PBO:0051967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imatinib upregulated ABL suppressing lncRNA 1","termid":"PBO:0051967"}


id: PBO:0038786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acylphosphatase 2","termid":"PBO:0038786"}


id: PBO:0057933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3659 host gene","termid":"PBO:0057933"}


id: PBO:0084548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the quinone oxidoreductase family; up-regulated in response to the fungicide mancozeb; possibly up-regulated by iodine","termid":"PBO:0084548"}


id: GO:0070318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process that activates or increases the rate or extent of the transition from the G0 quiescent state to the G1 phase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of G0 to G1 transition","termid":"GO:0070316"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"G0 to G1 transition","termid":"GO:0045023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of G0 to G1 transition","termid":"GO:0070318"}


id: PBO:0030539
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cAMP_level","termid":"PBO:0030539"}


id: GO:0015773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of raffinose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Raffinose occurs in plants almost as commonly as sucrose and is present in cereal grains, cotton seeds, and many legumes. It is synthesized from sucrose by transfer of a galactopyranoside from myo-inositol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisaccharide transport","termid":"GO:2001088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"raffinose transport","termid":"GO:0015773"}


id: PBO:0041501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 75","termid":"PBO:0041501"}


id: PBO:0053264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase 1","termid":"PBO:0053264"}


id: GO:0001940
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The pronucleus originating from the spermatozoa that was involved in fertilization.","definition_xrefs":["GOC:hjd","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pronucleus","termid":"GO:0045120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"male pronucleus","termid":"GO:0001940"}


id: PR:P40997
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ceg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-capping enzyme subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2F12.08c","synonyms":[{"name":"GTP--RNA guanylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GTase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ceg1","type":"exact"},{"name":"mRNA guanylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40997"}


id: GO:0052239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a lower concentration of a specific chemical within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative chemotaxis in other organism involved in symbiotic interaction (obsolete GO:0052239)","synonyms":[{"name":"negative chemotaxis in other organism during symbiotic interaction","type":"related"},{"name":"negative chemotaxis within other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052239"}


id: GO:0034604
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + CoA + NAD+ = acetyl-CoA + CO2 + NADH.","definition_xrefs":["ISBN:0201090910","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase [NAD(P)+] activity","termid":"GO:0034603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pyruvate dehydrogenase (NAD+) activity","secondary_identifiers":["KEGG_REACTION:R00209","MetaCyc:PYRUVDEH-RXN","RHEA:28042","EC:1.2.1.104"],"termid":"GO:0034604"}


id: GO:0070245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of thymocyte death by apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell apoptotic process","termid":"GO:0070234"},{"relation_name":"is_a","term_name":"regulation of thymocyte apoptotic process","termid":"GO:0070243"},{"relation_name":"positively_regulates","term_name":"thymocyte apoptotic process","termid":"GO:0070242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of thymocyte apoptotic process","synonyms":[{"name":"activation of thymocyte apoptosis","type":"narrow"},{"name":"positive regulation of immature T cell apoptosis","type":"related"},{"name":"positive regulation of thymocyte apoptosis","type":"narrow"},{"name":"stimulation of thymocyte apoptosis","type":"narrow"},{"name":"up regulation of thymocyte apoptosis","type":"exact"},{"name":"up-regulation of thymocyte apoptosis","type":"exact"},{"name":"upregulation of thymocyte apoptosis","type":"exact"}],"termid":"GO:0070245"}


id: PBO:0016991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin, related to Gsf2","termid":"PBO:0016991"}


id: FYPO:0003624
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of threonine residues of one or more specific proteins is decreased during a cellular response to heat.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased protein threonine phosphorylation during cellular response to heat (obsolete FYPO:0003624)","synonyms":[{"name":"decreased protein threonine phosphorylation during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"decreased protein threonine phosphorylation during cellular response to heat during vegetative growth","type":"exact"},{"name":"reduced protein threonine phosphorylation during cellular response to heat","type":"exact"}],"termid":"FYPO:0003624"}


id: GO:1990820
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98457],"is_not":false,"summary":null,"term":"GO:1990820"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of mitotic DNA integrity checkpoint signaling.","definition_xrefs":["PMID:7548844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to DNA integrity checkpoint signaling","termid":"GO:0072402"},{"relation_name":"is_a","term_name":"response to mitotic cell cycle checkpoint signaling","termid":"GO:0072414"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mitotic DNA integrity checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to signal involved in mitotic DNA integrity checkpoint","type":"exact"}],"termid":"GO:1990820","terms_by_termid":{"GO:1990820":null}}


id: GO:0005923
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An occluding cell-cell junction that is composed of a branching network of sealing strands that completely encircles the apical end of each cell in an epithelial sheet; the outer leaflets of the two interacting plasma membranes are seen to be tightly apposed where sealing strands are present. Each sealing strand is composed of a long row of transmembrane adhesion proteins embedded in each of the two interacting plasma membranes.","definition_xrefs":["ISBN:0815332181","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tight junction","termid":"GO:0070160"},{"relation_name":"part_of","term_name":"apical junction complex","termid":"GO:0043296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bicellular tight junction","secondary_identifiers":["NIF_Subcellular:sao1939999134","Wikipedia:Tight_junction"],"synonyms":[{"name":"zonula occludens","type":"exact"}],"termid":"GO:0005923"}


id: PBO:0057797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3119-2","termid":"PBO:0057797"}


id: GO:0097255
data:
  {"annotated_genes":["SJAG_04355","SJAG_03036"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97746,108300],"is_not":false,"summary":null,"term":"GO:0097255"}]},"cv_name":"cellular_component","definition":"A highly conserved protein complex comprised of two ATP-dependent DNA helicases (Rvb1p and Rvb2p in yeast, Pontin52 and Reptin52 in humans), Pih1p in yeast or PIH1D1 in humans, and Tah1 in yeast or RPAP3 in humans. The complex associates with Hsp90 and is thought to have a role in assembly of large protein or protein/nucleic acid complexes. In this role it is involved in multiple processes such as box C/D snoRNP biogenesis, phosphatidylinositol-3 kinase-related protein kinase (PIKK) signaling, RNA polymerase II assembly, and others.","definition_xrefs":["PMID:21925213","GOC:mcc","PMID:15766533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03036":null,"SJAG_04355":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"R2TP complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097255","terms_by_termid":{"GO:0097255":null}}


id: GO:0070775
data:
  {"annotated_genes":["SJAG_04815","SJAG_01009","SJAG_00545","SJAG_01385","SJAG_00411","SJAG_02629","SJAG_02165"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[86810,95732,101354,100487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036410"},{"annotations":[90011,103974,101355,102556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033100"},{"annotations":[86811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990467"}]},"cv_name":"cellular_component","definition":"A multisubunit complex that catalyzes the acetylation of histone H3.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone acetyltransferase complex","termid":"GO:0000123"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00411":null,"SJAG_00545":null,"SJAG_01009":null,"SJAG_01385":null,"SJAG_02165":null,"SJAG_02629":null,"SJAG_04815":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"H3 histone acetyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"H3 HAT complex","type":"exact"}],"termid":"GO:0070775","terms_by_termid":{"GO:0033100":null,"GO:0036410":null,"GO:1990467":null}}


id: GO:0045624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T-helper cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"is_a","term_name":"positive regulation of CD4-positive, alpha-beta T cell differentiation","termid":"GO:0043372"},{"relation_name":"is_a","term_name":"regulation of T-helper cell differentiation","termid":"GO:0045622"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"T-helper cell differentiation","termid":"GO:0042093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of T-helper cell differentiation","synonyms":[{"name":"activation of T-helper cell differentiation","type":"narrow"},{"name":"positive regulation of T-helper cell development","type":"related"},{"name":"stimulation of T-helper cell differentiation","type":"narrow"},{"name":"up regulation of T-helper cell differentiation","type":"exact"},{"name":"up-regulation of T-helper cell differentiation","type":"exact"},{"name":"upregulation of T-helper cell differentiation","type":"exact"}],"termid":"GO:0045624"}


id: PBO:0067186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 246, pseudogene","termid":"PBO:0067186"}


id: GO:0035826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of rubidium ions (Rb+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete rubidium ion transport (obsolete GO:0035826)","synonyms":[{"name":"Rb+ transport","type":"exact"},{"name":"rubidium cation transport","type":"exact"}],"termid":"GO:0035826"}


id: PBO:0000971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L27 (predicted)","termid":"PBO:0000971"}


id: GO:1902130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (+)-lariciresinol.","definition_xrefs":["PMID:8910615","PMID:9872995","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"(+)-lariciresinol metabolic process","synonyms":[{"name":"(+)-lariciresinol metabolism","type":"exact"}],"termid":"GO:1902130"}


id: GO:0031995
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to insulin-like growth factor II.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insulin-like growth factor binding","termid":"GO:0005520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"insulin-like growth factor II binding","synonyms":[{"name":"IGF-II binding","type":"exact"}],"termid":"GO:0031995"}


id: PBO:0005403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase (predicted)","termid":"PBO:0005403"}


id: PBO:0065857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB14, member RAS oncogene family","termid":"PBO:0065857"}


id: GO:2001009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of plant-type cell wall cellulose biosynthetic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall macromolecule metabolic process","termid":"GO:0010981"},{"relation_name":"is_a","term_name":"regulation of cellulose biosynthetic process","termid":"GO:2001006"},{"relation_name":"regulates","term_name":"plant-type cell wall cellulose biosynthetic process","termid":"GO:0052324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of plant-type cell wall cellulose biosynthetic process","synonyms":[{"name":"regulation of cell wall cellulose biosynthesis","type":"exact"},{"name":"regulation of cellulose biosynthesis during cell wall biosynthesis","type":"related"}],"termid":"GO:2001009"}


id: PBO:0067548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 697, pseudogene","termid":"PBO:0067548"}


id: GO:0072319
data:
  {"annotated_genes":["SJAG_05296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072318"}]},"cv_name":"biological_process","definition":"A protein depolymerization process that results in the disassembly of vesicle coat proteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein depolymerization","termid":"GO:0051261"},{"relation_name":"part_of","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05296":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"vesicle uncoating","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vesicle coat disassembly","type":"exact"}],"termid":"GO:0072319","terms_by_termid":{"GO:0072318":null}}


id: GO:0045991
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription regulation process in which the presence of one carbon source leads to an increase in the frequency, rate, or extent of transcription of specific genes involved in the metabolism of other carbon sources.","definition_xrefs":["GOC:mah","PMID:10559153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription","termid":"GO:0045893"},{"relation_name":"is_a","term_name":"carbon catabolite regulation of transcription","termid":"GO:0045990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150","GO:0006355"],"is_obsolete":false,"name":"carbon catabolite activation of transcription","synonyms":[{"name":"positive regulation of transcription by carbon catabolites","type":"exact"}],"termid":"GO:0045991"}


id: PATO:0002252
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being flattened along the antero-posterior axis.","definition_xrefs":["PATOC:JC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flattened","termid":"PATO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antero-posteriorly flattened","synonyms":[{"name":"antero-posteriorly compressed","type":"exact"}],"termid":"PATO:0002252"}


id: PBO:0077526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 240","termid":"PBO:0077526"}


id: PBO:0030235
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_immediate_intracellular_calcium_spike_following_extracellular_calcium_stimulus","termid":"PBO:0030235"}


id: PBO:0002724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASp homolog","termid":"PBO:0002724"}


id: GO:0001957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Direct ossification that occurs within mesenchyme or an accumulation of relatively unspecialized cells.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direct ossification","termid":"GO:0036072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intramembranous ossification","secondary_identifiers":["Wikipedia:Intramembranous_ossification"],"synonyms":[{"name":"dermal ossification","type":"narrow"},{"name":"intramembranous bone ossification","type":"related"}],"termid":"GO:0001957"}


id: GO:0061147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the endocardial endothelium over time, from its initial formation to the mature structure. The endocardium is an anatomical structure comprised of an endothelium and an extracellular matrix that forms the innermost layer of tissue of the heart, and lines the heart chambers.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelium development","termid":"GO:0003158"},{"relation_name":"part_of","term_name":"endocardium development","termid":"GO:0003157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial endothelium development","termid":"GO:0061147"}


id: PBO:0071071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 73","termid":"PBO:0071071"}


id: PBO:0076009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress induced phosphoprotein 1","termid":"PBO:0076009"}


id: GO:1990911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of exposure to aversive or demanding psychological and social conditions that tax or exceed the behavioral resources of the organism.","definition_xrefs":["PMID:22922217","PMID:26458179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to psychosocial stress","termid":"GO:1990911"}


id: PBO:0083789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in rRNA processing and ribosome biogenesis; forms a complex with Utp22p; protein abundance increases in response to DNA replication stress","termid":"PBO:0083789"}


id: GO:1903529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dCDP biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:16317005"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of pyrimidine nucleotide biosynthetic process","termid":"GO:1900398"},{"relation_name":"is_a","term_name":"regulation of dCDP biosynthetic process","termid":"GO:1903528"},{"relation_name":"negatively_regulates","term_name":"dCDP biosynthetic process","termid":"GO:0006240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of dCDP biosynthetic process","synonyms":[{"name":"down regulation of dCDP anabolism","type":"exact"},{"name":"down regulation of dCDP biosynthesis","type":"exact"},{"name":"down regulation of dCDP biosynthetic process","type":"exact"},{"name":"down regulation of dCDP formation","type":"exact"},{"name":"down regulation of dCDP synthesis","type":"exact"},{"name":"down-regulation of dCDP anabolism","type":"exact"},{"name":"down-regulation of dCDP biosynthesis","type":"exact"},{"name":"down-regulation of dCDP biosynthetic process","type":"exact"},{"name":"down-regulation of dCDP formation","type":"exact"},{"name":"down-regulation of dCDP synthesis","type":"exact"},{"name":"downregulation of dCDP anabolism","type":"exact"},{"name":"downregulation of dCDP biosynthesis","type":"exact"},{"name":"downregulation of dCDP biosynthetic process","type":"exact"},{"name":"downregulation of dCDP formation","type":"exact"},{"name":"downregulation of dCDP synthesis","type":"exact"},{"name":"inhibition of dCDP anabolism","type":"narrow"},{"name":"inhibition of dCDP biosynthesis","type":"narrow"},{"name":"inhibition of dCDP biosynthetic process","type":"narrow"},{"name":"inhibition of dCDP formation","type":"narrow"},{"name":"inhibition of dCDP synthesis","type":"narrow"},{"name":"negative regulation of dCDP anabolism","type":"exact"},{"name":"negative regulation of dCDP biosynthesis","type":"exact"},{"name":"negative regulation of dCDP formation","type":"exact"},{"name":"negative regulation of dCDP synthesis","type":"exact"}],"termid":"GO:1903529"}


id: PBO:0080178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 13","termid":"PBO:0080178"}


id: PBO:0047749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folliculin interacting protein 2","termid":"PBO:0047749"}


id: GO:1900768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fonsecin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"fonsecin metabolic process","termid":"GO:1900767"},{"relation_name":"is_a","term_name":"naphtho-gamma-pyrone catabolic process","termid":"GO:1900786"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0044248","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"fonsecin catabolic process","synonyms":[{"name":"fonsecin breakdown","type":"exact"},{"name":"fonsecin catabolism","type":"exact"},{"name":"fonsecin degradation","type":"exact"}],"termid":"GO:1900768"}


id: PBO:0060214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mevalonate kinase","termid":"PBO:0060214"}


id: PBO:0042790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 164 pseudogene 1","termid":"PBO:0042790"}


id: PBO:0069633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 910, pseudogene","termid":"PBO:0069633"}


id: GO:0030001
data:
  {"annotated_genes":["SJAG_04471","SJAG_01639","SJAG_01119","SJAG_03528","SJAG_02440","SJAG_02968","SJAG_00211","SJAG_02883","SJAG_00547","SJAG_01090","SJAG_04675","SJAG_04698","SJAG_04668","SJAG_01078","SJAG_00296","SJAG_02019","SJAG_00321","SJAG_00222","SJAG_01400","SJAG_02457","SJAG_04677","SJAG_03401","SJAG_04737","SJAG_01990","SJAG_04551","SJAG_02578","SJAG_04867","SJAG_04167","SJAG_04185","SJAG_01353","SJAG_03231","SJAG_03497","SJAG_01527","SJAG_04260","SJAG_03873","SJAG_03516","SJAG_01493","SJAG_04616","SJAG_04743","SJAG_03079","SJAG_00328","SJAG_03631","SJAG_02399","SJAG_01007","SJAG_02322","SJAG_04830","SJAG_01803","SJAG_02532","SJAG_02484","SJAG_04028","SJAG_01541","SJAG_04096","SJAG_05229","SJAG_03850","SJAG_02473","SJAG_02877","SJAG_02735","SJAG_04757","SJAG_02834","SJAG_03399","SJAG_04246","SJAG_02445"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92612],"is_not":false,"summary":null,"term":"GO:0030001"},{"annotations":[114265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036249"},{"annotations":[63622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070574"},{"annotations":[91695,93420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036444"},{"annotations":[110501,88393,95689,88447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098703"},{"annotations":[111632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140146"},{"annotations":[90873,91745,94390,97686,86756,113457,109991,91515,105420,104718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070588"},{"annotations":[103906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060003"},{"annotations":[108855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015677"},{"annotations":[110655,84009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098705"},{"annotations":[97541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097430"},{"annotations":[65780,61763,110656,84010,99854,100671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035434"},{"annotations":[100761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006825"},{"annotations":[87250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061856"},{"annotations":[86758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032472"},{"annotations":[96550,109858,94143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048250"},{"annotations":[109279,61034,99863,91388,108856,88495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034755"},{"annotations":[85337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140466"},{"annotations":[110698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990616"},{"annotations":[56723,86280,103640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903830"},{"annotations":[63623,91389,99864,87251,104720,61035,86759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071421"},{"annotations":[103368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045016"},{"annotations":[90280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140141"},{"annotations":[87268,109427],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[112068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098716"},{"annotations":[112069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035444"},{"annotations":[98209],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905665"},{"annotations":[108406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097623"},{"annotations":[85577,93063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990573"},{"annotations":[61065,57272,66601,93064,85379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071805"},{"annotations":[88500,108857,99855,88496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[89435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051209"},{"annotations":[104721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"},{"annotations":[61453,61556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044718"},{"annotations":[108858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015891"},{"annotations":[61557,61454,106839,106840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"},{"annotations":[92805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036376"},{"annotations":[108407,66600,85381,60805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035725"},{"annotations":[110408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140147"},{"annotations":[100239,109280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directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation 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id: PBO:0088354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphoinositol pentakisphosphate kinase/IP8 pyrophosphatase","termid":"PBO:0088354"}


id: GO:1903474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that maintains the mitotic actinomyosin contractile ring at the plasma membrane.","definition_xrefs":["GOC:TermGenie","PMID:28784611","GOC:mtg_cell_cycle","GOC:vw","PMID:19139265","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete anchoring of the mitotic actomyosin contractile ring to the plasma membrane (obsolete GO:1903474)","synonyms":[{"name":"cytokinetic ring anchoring involved in mitotic cell cycle","type":"related"},{"name":"maintenance of contractile ring localisation involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"maintenance of contractile ring localization involved in cell cycle cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"maintenance of contractile ring localization involved in cytokinesis during cell cycle involved in mitotic cell cycle","type":"related"}],"termid":"GO:1903474"}


id: PBO:0079118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ts translation elongation factor, mitochondrial","termid":"PBO:0079118"}


id: FYPO:0006044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form mitotic spindle microtubules that are longer than normal, and the protruding kinetochore microtubules are surrounded by an extension of the nuclear envelope, with the kinetochore-attached end at the distal tip of the protrusion.","definition_xrefs":["PMID:27146110","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"nuclear envelope protrusion present during mitosis","termid":"FYPO:0003788"},{"relation_name":"is_a","term_name":"long microtubules","termid":"FYPO:0000055"},{"relation_name":"is_a","term_name":"long mitotic spindle","termid":"FYPO:0000733"},{"relation_name":"is_a","term_name":"nuclear envelope protrusion present during mitosis","termid":"FYPO:0003788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0002403","FYPO:0000002","FYPO:0000054","FYPO:0000120","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002399"],"is_obsolete":false,"name":"long mitotic kinetochore microtubules with kinetochore at tip of nuclear envelope protrusion","synonyms":[{"name":"elongated mitotic kinetochore microtubules with kinetochore at tip of nuclear envelope protrusion","type":"exact"},{"name":"elongated mitotic kinetochore microtubules with kinetochore at tip of nuclear envelope protrusion during M-phase","type":"exact"},{"name":"long mitotic kinetochore microtubules with kinetochore at tip of nuclear envelope deformation","type":"related"},{"name":"long mitotic kinetochore microtubules with kinetochore at tip of nuclear envelope protrusion during mitotic cell cycle","type":"related"},{"name":"long mitotic kinetochore microtubules with kinetochore at tip of nuclear envelope protrusion during vegetative growth","type":"exact"},{"name":"long mitotic spindle microtubules with nuclear envelope protrusion from the kinetochore attached end of the microtubule","type":"exact"},{"name":"nuclear envelope protrusion with long mitotic kinetochore microtubules and kinetochore at tip of nuclear envelope protrusion","type":"exact"}],"termid":"FYPO:0006044"}


id: GO:0098761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-7 stimulus.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"},{"relation_name":"is_a","term_name":"response to interleukin-7","termid":"GO:0098760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-7","synonyms":[{"name":"cellular response to IL-7","type":"exact"}],"termid":"GO:0098761"}


id: PR:O13954
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23H4.13c gene.","definition_xrefs":["UniProtKB:O13954","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23H4.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.13c","synonyms":[{"name":"Spom972h-SPAC23H4.13c","type":"exact"}],"termid":"PR:O13954"}


id: PBO:0036477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein subunit of SEA and Iml1 complexes Iml1 (predicted)","termid":"PBO:0036477"}


id: PBO:0053289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain containing 2","termid":"PBO:0053289"}


id: GO:0036259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of raffinose that occur in the presence of oxygen.","definition_xrefs":["PMID:10082789","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"raffinose catabolic process","termid":"GO:0034484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"aerobic raffinose catabolic process","synonyms":[{"name":"aerobic raffinose breakdown","type":"exact"},{"name":"aerobic raffinose catabolism","type":"exact"},{"name":"aerobic raffinose degradation","type":"exact"}],"termid":"GO:0036259"}


id: PBO:0081756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 687","termid":"PBO:0081756"}


id: PBO:0060675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"necdin, MAGE family member","termid":"PBO:0060675"}


id: PBO:0050331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 33","termid":"PBO:0050331"}


id: PBO:0047407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 45","termid":"PBO:0047407"}


id: PBO:0075632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 2B","termid":"PBO:0075632"}


id: PBO:0039128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen induced 1 pseudogene 1","termid":"PBO:0039128"}


id: PR:Q9C0Y2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB2C8.01 gene.","definition_xrefs":["UniProtKB:Q9C0Y2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell agglutination protein PB2C8.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB2C8.01","synonyms":[{"name":"Spom972h-SPAPB2C8.01","type":"exact"}],"termid":"PR:Q9C0Y2"}


id: PBO:0050846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ICA1 antisense RNA 1","termid":"PBO:0050846"}


id: GO:0098907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in an SA node cardiac myocyte. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell action potential","termid":"GO:0098901"},{"relation_name":"regulates","term_name":"SA node cell action potential","termid":"GO:0086015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of SA node cell action potential","synonyms":[{"name":"regulation of SA node cardiac muscle cell action potential","type":"exact"},{"name":"regulation of SAN cardiac muscle cell action potential","type":"exact"},{"name":"regulation of sinoatrial node cardiac muscle cell action potential","type":"exact"},{"name":"regulation of sinus node cardiac muscle cell action potential","type":"narrow"}],"termid":"GO:0098907"}


id: GO:0007493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into an endoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:go_curators","ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"endodermal cell fate commitment","termid":"GO:0001711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endodermal cell fate determination","synonyms":[{"name":"endoderm cell fate determination","type":"exact"}],"termid":"GO:0007493"}


id: GO:0003937
data:
  {"annotated_genes":["SJAG_04681"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115050],"is_not":false,"summary":null,"term":"GO:0003937"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: IMP + H2O = 5-formamido-1-(5-phosphoribosyl)imidazole-4-carboxamide.","definition_xrefs":["EC:3.5.4.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclohydrolase activity","termid":"GO:0019238"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04681":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"IMP cyclohydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-73797","RHEA:18445","MetaCyc:IMPCYCLOHYDROLASE-RXN"],"synonyms":[{"name":"IMP 1,2-hydrolase (decyclizing)","type":"related"},{"name":"IMP synthetase activity","type":"related"},{"name":"inosinate cyclohydrolase activity","type":"related"},{"name":"inosinicase activity","type":"related"}],"termid":"GO:0003937","terms_by_termid":{"GO:0003937":null}}


id: PBO:0060715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 12","termid":"PBO:0060715"}


id: FYPO:0006076
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature siRNA measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell during vegetative growth","termid":"FYPO:0003161"},{"relation_name":"is_a","term_name":"decreased siRNA level","termid":"FYPO:0004205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"siRNA absent from cell","synonyms":[{"name":"siRNA absent from cell during mitotic cell cycle","type":"related"},{"name":"siRNA absent from cell during vegetative growth","type":"exact"},{"name":"small interfering RNA absent from cell","type":"exact"}],"termid":"FYPO:0006076"}


id: GO:0075075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of the symbiont adenylate cyclase activity, which catalyze the reaction: ATP = 3',5'-cyclic AMP + diphosphate. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont adenylate cyclase activity (obsolete GO:0075075)","termid":"GO:0075075"}


id: GO:0006392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The extension of an RNA molecule after transcription initiation and promoter clearance at mitochondrial promoter by the addition of ribonucleotides catalyzed by a mitchondrial RNA polymerase.","definition_xrefs":["GOC:mah","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA metabolic process","termid":"GO:0000959"},{"relation_name":"is_a","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"},{"relation_name":"part_of","term_name":"mitochondrial transcription","termid":"GO:0006390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0140053","GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"transcription elongation by mitochondrial RNA polymerase","synonyms":[{"name":"RNA elongation from mitochondrial promoter","type":"exact"},{"name":"transcription elongation from mitochondrial promoter","type":"exact"}],"termid":"GO:0006392"}


id: PBO:0038930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADGRL3 antisense RNA 1","termid":"PBO:0038930"}


id: MOD:00388
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively attaches an L-alanine residue to murein peptidoglycan by a pentaglycine linker peptide.","definition_xrefs":["RESID:AA0383","PubMed:8163519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"},{"relation_name":"is_a","term_name":"peptidoglycanated residue","termid":"MOD:01159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-alanyl-pentaglycyl-murein peptidoglycan","synonyms":[{"name":"(2R,6S)-2-(N-mureinyl-(R)-alanyl-(S)-isoglutamyl)amino-6-(alanyl-pentaglycyl)amino-pimeloyl-(S)-alanyl-(S)-alanine","type":"exact"},{"name":"L-alanyl-pentaglycyl-murein peptidoglycan","type":"exact"},{"name":"MOD_RES Pentaglycyl murein peptidoglycan amidated alanine","type":"exact"}],"termid":"MOD:00388"}


id: PBO:0057857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3168","termid":"PBO:0057857"}


id: PBO:0067630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 802, pseudogene","termid":"PBO:0067630"}


id: GO:0046495
data:
  {"annotated_genes":["SJAG_03096","SJAG_04693"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109158],"is_not":false,"summary":null,"term":"GO:0046495"},{"annotations":[104556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071590"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving nicotinamide riboside, the product of the formation of a glycosidic bond between ribose and nicotinamide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine nucleoside metabolic process","termid":"GO:0070637"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03096":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"nicotinamide riboside metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"N-ribosylnicotinamide metabolic process","type":"exact"},{"name":"nicotinamide riboside metabolism","type":"exact"}],"termid":"GO:0046495","terms_by_termid":{"GO:0046495":null,"GO:0071590":null}}


id: PBO:0085556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein containing an N-terminal epsin-like domain; involved in clathrin recruitment and traffic between the Golgi and endosomes; associates with the clathrin adaptor Gga2p","termid":"PBO:0085556"}


id: GO:0030484
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The contractile fibers, composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete muscle fiber (obsolete GO:0030484)","synonyms":[{"name":"muscle fiber","type":"exact"},{"name":"muscle fibre","type":"exact"}],"termid":"GO:0030484"}


id: PBO:0035876
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_ubiquitination_during_vegetative_growth","termid":"PBO:0035876"}


id: GO:0004740
data:
  {"annotated_genes":["SJAG_01402"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95095],"is_not":false,"summary":null,"term":"GO:0004740"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + pyruvate dehydrogenase (acetyl-transferring) = ADP + pyruvate dehydrogenase (acetyl-transferring) phosphate.","definition_xrefs":["EC:2.7.11.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01402":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0003824","GO:0016301","GO:0003674","GO:0004672"],"is_obsolete":false,"name":"pyruvate dehydrogenase (acetyl-transferring) kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-203946","RHEA:23052","MetaCyc:2.7.11.2-RXN"],"synonyms":[{"name":"PDH kinase activity","type":"related"},{"name":"PDHK","type":"related"},{"name":"PDK","type":"related"},{"name":"pyruvate dehydrogenase kinase (phosphorylating) activity","type":"related"},{"name":"pyruvate dehydrogenase kinase activity","type":"related"}],"termid":"GO:0004740","terms_by_termid":{"GO:0004740":null}}


id: GO:0001165
data:
  {"annotated_genes":["SJAG_02747","SJAG_05331"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89222,112529],"is_not":false,"summary":null,"term":"GO:0001165"}]},"cv_name":"molecular_function","definition":"Binding to a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by RNA polymerase I. RNA polymerase I elements are referred to either enhancers or upstream control element (UCE, or alternately referred to as the upstream element).","definition_xrefs":["PMID:12865296","PMID:8057832","PMID:14969726","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase I transcription regulatory region sequence-specific DNA binding","termid":"GO:0001163"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02747":null,"SJAG_05331":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677","GO:0000976"],"is_obsolete":false,"name":"RNA polymerase I cis-regulatory region sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0001166"],"synonyms":[{"name":"RNA polymerase I enhancer sequence-specific DNA binding","type":"related"},{"name":"RNA polymerase I upstream control element sequence-specific DNA binding","type":"related"},{"name":"RNA polymerase I upstream element sequence-specific DNA binding","type":"related"}],"termid":"GO:0001165","terms_by_termid":{"GO:0001165":null}}


id: SO:0000473
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The gene product is involved in its own transcriptional regulation where it decreases transcription.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptionally_repressed","termid":"SO:0000126"},{"relation_name":"is_a","term_name":"autoregulated","termid":"SO:0000471"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negatively_autoregulated","synonyms":[{"name":"negatively autoregulated","type":"exact"}],"termid":"SO:0000473"}


id: GO:0030243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"cellulose metabolic process","secondary_identifiers":["GO:0016177"],"synonyms":[{"name":"cellulose metabolism","type":"exact"}],"termid":"GO:0030243"}


id: PBO:0067037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 51, pseudogene","termid":"PBO:0067037"}


id: PR:P87109
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phospholipase DDHD2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00563","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C20G8.02, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G8.02","secondary_identifiers":["UniProtKB:P87109"],"synonyms":[{"name":"Spom972h-DDHD2","type":"exact"}],"termid":"PR:P87109"}


id: PBO:0091576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein adenylyltransferase SelO","termid":"PBO:0091576"}


id: PBO:0004792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Cwf10 (predicted)","termid":"PBO:0004792"}


id: FYPO:0002120
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of sodium:hydrogen antiporter activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transmembrane transporter activity","termid":"FYPO:0002115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000002","FYPO:0002114"],"is_obsolete":false,"name":"normal sodium:hydrogen antiporter activity","termid":"FYPO:0002120"}


id: GO:0001641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled receptor that is activated by trans-1-aminocyclopentane-1,3-dicarboxylic acid (t-ACPD) and inhibits adenylate cyclase activity.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase inhibiting G protein-coupled glutamate receptor activity","termid":"GO:0001640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"group II metabotropic glutamate receptor activity","termid":"GO:0001641"}


id: PBO:0066665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHO family interacting cell polarization regulator 2","termid":"PBO:0066665"}


id: GO:0034672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process that results in the creation of defined areas or spaces within the pronephros along the anterior/posterior axis to which cells respond and eventually are instructed to differentiate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in pronephros development","termid":"GO:0039017"},{"relation_name":"is_a","term_name":"anterior/posterior pattern specification involved in kidney development","termid":"GO:0072098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior/posterior pattern specification involved in pronephros development","synonyms":[{"name":"anterior/posterior pattern specification involved in pronephric kidney development","type":"exact"}],"termid":"GO:0034672"}


id: PBO:0090770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF34 family protein","termid":"PBO:0090770"}


id: GO:1990016
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Elongated portion of a tanycyte that sticks into the periventricular layer of neuropil where it appears to contact a blood vessel; characterized by numerous cytoplasmic extensions. A tanycyte is a specialized elongated ventricular ependymal cell that has processes that extend to the outer, or pial, surface of the CNS.","definition_xrefs":["ISBN:0195065719","NIF_Subcellular:sao901230115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neck portion of tanycyte","synonyms":[{"name":"neck portion","type":"broad"}],"termid":"GO:1990016"}


id: PBO:0075920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 12","termid":"PBO:0075920"}


id: GO:0004493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-methylmalonyl-CoA = (S)-methylmalonyl-CoA.","definition_xrefs":["EC:5.1.99.1","RHEA:20553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"methylmalonyl-CoA epimerase activity","secondary_identifiers":["KEGG_REACTION:R02765","MetaCyc:METHYLMALONYL-COA-EPIM-RXN","Reactome:R-HSA-71020"],"synonyms":[{"name":"2-methyl-3-oxopropanoyl-CoA 2-epimerase activity","type":"related"},{"name":"DL-methylmalonyl-CoA racemase activity","type":"related"},{"name":"methylmalonyl coenzyme A racemase activity","type":"related"},{"name":"methylmalonyl-CoA 2-epimerase activity","type":"related"},{"name":"methylmalonyl-CoA racemase activity","type":"related"}],"termid":"GO:0004493"}


id: PBO:0053288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIMD1 antisense RNA 1","termid":"PBO:0053288"}


id: GO:0052727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: antheraxanthin = capsanthin.","definition_xrefs":["EC:5.3.99.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"capsanthin synthase activity","secondary_identifiers":["RHEA:17373","MetaCyc:RXN-7947"],"synonyms":[{"name":"CCS","type":"related"},{"name":"capsanthin-capsorubin synthase activity","type":"broad"},{"name":"ketoxanthophyll synthase activity","type":"broad"}],"termid":"GO:0052727"}


id: GO:0010019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a molecular signal is transduced between the chloroplast and nucleus, such that expression of nuclear encoding photosynthetic proteins is coupled with chloroplast biogenesis.","definition_xrefs":["PMID:8972595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"chloroplast-nucleus signaling pathway","synonyms":[{"name":"chloroplast-nucleus signalling pathway","type":"exact"}],"termid":"GO:0010019"}


id: GO:0045608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of auditory hair cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epidermal cell differentiation","termid":"GO:0045605"},{"relation_name":"is_a","term_name":"regulation of inner ear auditory receptor cell differentiation","termid":"GO:0045607"},{"relation_name":"is_a","term_name":"negative regulation of inner ear receptor cell differentiation","termid":"GO:2000981"},{"relation_name":"negatively_regulates","term_name":"inner ear auditory receptor cell differentiation","termid":"GO:0042491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of inner ear auditory receptor cell differentiation","synonyms":[{"name":"down regulation of auditory receptor cell differentiation","type":"exact"},{"name":"down-regulation of auditory receptor cell differentiation","type":"exact"},{"name":"downregulation of auditory receptor cell differentiation","type":"exact"},{"name":"inhibition of auditory receptor cell differentiation","type":"narrow"},{"name":"negative regulation of auditory hair cell differentiation","type":"exact"},{"name":"negative regulation of auditory receptor cell differentiation","type":"related"}],"termid":"GO:0045608"}


id: PBO:0081912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 879","termid":"PBO:0081912"}


id: FYPO:0004082
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal protein phosphorylation during mitosis","synonyms":[{"name":"normal protein phosphorylation during mitosis during vegetative growth","type":"exact"},{"name":"normal protein phosphorylation during mitotic M phase","type":"related"},{"name":"normal protein phosphorylation during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0004082"}


id: PBO:0089956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,2-mannosyltransferase Omh5","termid":"PBO:0089956"}


id: PATO:0002172
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being split along the radial axis.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"split","termid":"PATO:0001786"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"split radially","termid":"PATO:0002172"}


id: FYPO:0000270
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115502,115514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000271"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02592":null},"genotype_count":2,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to osmotic stress","references_by_uniquename":{"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_00266"],"single_locus_genotype_uniquenames":["sty1delta","atf1delta"],"synonyms":[{"name":"hypersensitive to osmotic stress","type":"exact"},{"name":"osmotic stress resistance: decreased","type":"related"},{"name":"sensitive to osmotic stress during mitotic cell cycle","type":"related"},{"name":"sensitive to osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0000270","terms_by_termid":{"FYECO:0000207":null,"FYPO:0000271":null,"FYPO_EXT:0000001":null}}


id: GO:0015377
data:
  {"annotated_genes":["SJAG_03401"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101748],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015379"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cation(out) + Cl-(out) = cation(in) + Cl-(in).","definition_xrefs":["PMID:31747317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride transmembrane transporter activity","termid":"GO:0015108"},{"relation_name":"is_a","term_name":"monoatomic anion:monoatomic cation symporter activity","termid":"GO:0015296"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"chloride:monoatomic cation symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["TC:2.A.30"],"synonyms":[{"name":"cation:chloride cotransporter activity","type":"broad"},{"name":"cation:chloride symporter activity","type":"broad"}],"termid":"GO:0015377","terms_by_termid":{"GO:0015379":null}}


id: PR:O14187
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-processing-splicing factor 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01110","PANTHER:PTHR11140:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor spp42 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.12c","secondary_identifiers":["UniProtKB:O14187"],"synonyms":[{"name":"Spom972h-PRPF8","type":"exact"},{"name":"complexed with cdc5 protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14187"}


id: GO:0010744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of macrophage derived foam cell differentiation. Macrophage derived foam cell differentiation is the process in which a macrophage acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions.","definition_xrefs":["GOC:add","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macrophage derived foam cell differentiation","termid":"GO:0010743"},{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"positively_regulates","term_name":"macrophage derived foam cell differentiation","termid":"GO:0010742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage derived foam cell differentiation","termid":"GO:0010744"}


id: PBO:0057523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 641","termid":"PBO:0057523"}


id: RO:0002622
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"visits","termid":"RO:0002618"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"visits_flowers_of","termid":"RO:0002622"}


id: PBO:0003109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 2","termid":"PBO:0003109"}


id: FYECO:0000364
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which diamide was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ diamide","synonyms":[{"name":"+ N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide","type":"exact"}],"termid":"FYECO:0000364"}


id: PBO:0111915
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBAP2/UBAP2L","termid":"PBO:0111915"}


id: GO:0102384
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 19-O-beta-glucopyranosyl-steviol + UDP-alpha-D-glucose = rubusoside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 19-O-beta-glucopyranosyl-steviol glucosyltransferase activity (obsolete GO:0102384)","termid":"GO:0102384"}


id: GO:1900725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving osmoregulated periplasmic glucan.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"osmoregulated periplasmic glucan metabolic process","synonyms":[{"name":"osmoregulated periplasmic glucan metabolism","type":"exact"}],"termid":"GO:1900725"}


id: MOD:01744
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Proteome Sciences TMT6plex-129 reporter+balance group.","definition_xrefs":["Unimod:737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent acylated residue","termid":"MOD:01715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-129 reporter+balance reagent acylated residue","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01744"}


id: GO:0047653
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-(+)-allantoin = (R)-(-)-allantoin.","definition_xrefs":["RHEA:10804","EC:5.1.99.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"allantoin racemase activity","secondary_identifiers":["KEGG_REACTION:R03925","MetaCyc:ALLANTOIN-RACEMASE-RXN"],"termid":"GO:0047653"}


id: PBO:0045654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 12","termid":"PBO:0045654"}


id: PBO:0073420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seizure related 6 homolog like","termid":"PBO:0073420"}


id: GO:1990795
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized region of the axon terminus portion of a rod bipolar axon. A rod bipolar cell is a neuron found in the retina and having connections with rod photoreceptor cells and neurons in the inner plexiform layer.","definition_xrefs":["PMID:19883736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal bouton","termid":"GO:0043195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"rod bipolar cell terminal bouton","termid":"GO:1990795"}


id: PR:P87153
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A T-complex protein 1 subunit eta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03631","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-complex protein 1 subunit eta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.12c","secondary_identifiers":["UniProtKB:P87153"],"synonyms":[{"name":"CCT-eta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CCT7","type":"exact"},{"name":"TCP-1-eta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P87153"}


id: GO:0097749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A membrane organization process resulting in the formation of a tubular projection. This may face inwardly (as in tubular membrane invaginations) or outwardly (as in endosomal tubules).","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"membrane tubulation","termid":"GO:0097749"}


id: PBO:0044262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 1","termid":"PBO:0044262"}


id: PR:Q9USH5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pwi1 gene.","definition_xrefs":["UniProtKB:Q9USH5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWI domain-containing protein C825.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC825.05c","synonyms":[{"name":"Spom972h-pwi1","type":"exact"}],"termid":"PR:Q9USH5"}


id: GO:0160039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a chloride ion by a channel that opens when the biogenic amine serotonin has been bound by the channel complex or one of its constituent parts. Serotonin (5-hydroxytryptamine) is a neurotransmitter and hormone found in vertebrates and invertebrates.","definition_xrefs":["PMID:11100728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"},{"relation_name":"is_a","term_name":"transmitter-gated monoatomic ion channel activity","termid":"GO:0022824"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic anion channel activity","termid":"GO:0099095"},{"relation_name":"is_a","term_name":"serotonin receptor activity","termid":"GO:0099589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0038023","GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"serotonin-gated chloride channel activity","secondary_identifiers":["Wikipedia:Ligand-gated_ion_channel","TC:1.A.9"],"termid":"GO:0160039"}


id: GO:0010615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, extent or frequency of the process in which cardiac muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle adaptation","termid":"GO:0010612"},{"relation_name":"is_a","term_name":"positive regulation of muscle adaptation","termid":"GO:0014744"},{"relation_name":"positively_regulates","term_name":"cardiac muscle adaptation","termid":"GO:0014887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac muscle adaptation","termid":"GO:0010615"}


id: GO:1904969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a slow muscle cell from one site to another.","definition_xrefs":["GOC:TermGenie","PMID:14667409","PMID:15572133","PMID:25534553","GOC:ymb","GO_REF:0000091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myotube cell migration","termid":"GO:0110122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"slow muscle cell migration","synonyms":[{"name":"slow-twitch muscle cell migration","type":"exact"}],"termid":"GO:1904969"}


id: GO:1902964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of metalloendopeptidase activity involved in amyloid precursor protein catabolic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:sjp","PMID:18362153"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process (obsolete GO:1902964)","synonyms":[{"name":"activation of metalloendopeptidase activity involved in APP catabolic process","type":"narrow"},{"name":"activation of metalloendopeptidase activity involved in APP catabolism","type":"narrow"},{"name":"activation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"activation of metalloendoprotease activity involved in APP catabolic process","type":"narrow"},{"name":"activation of metalloendoprotease activity involved in APP catabolism","type":"narrow"},{"name":"activation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"activation of metalloendoproteinase activity involved in APP catabolic process","type":"narrow"},{"name":"activation of metalloendoproteinase activity involved in APP catabolism","type":"narrow"},{"name":"activation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"narrow"},{"name":"activation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"narrow"},{"name":"activation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"narrow"},{"name":"activation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"narrow"},{"name":"positive regulation of metalloendopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of metalloendopeptidase activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"positive regulation of metalloendoprotease activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of metalloendoprotease activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"positive regulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"positive regulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"positive regulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"positive regulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"positive regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"positive regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"positive regulation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of metalloendopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of metalloendopeptidase activity involved in APP catabolism","type":"exact"},{"name":"up regulation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of metalloendoprotease activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of metalloendoprotease activity involved in APP catabolism","type":"exact"},{"name":"up regulation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up regulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"up regulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"up regulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up regulation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of metalloendopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"up-regulation of metalloendopeptidase activity involved in APP catabolism","type":"exact"},{"name":"up-regulation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of metalloendoprotease activity involved in APP catabolic process","type":"exact"},{"name":"up-regulation of metalloendoprotease activity involved in APP catabolism","type":"exact"},{"name":"up-regulation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"up-regulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"up-regulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"up-regulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"up-regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"up-regulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"up-regulation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of metalloendopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of metalloendopeptidase activity involved in APP catabolism","type":"exact"},{"name":"upregulation of metalloendopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of metalloendopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of metalloendopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of metalloendopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in APP catabolism","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of metalloendoprotease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in APP catabolic process","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in APP catabolism","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"upregulation of metalloendoproteinase activity involved in amyloid precursor protein degradation","type":"exact"}],"termid":"GO:1902964"}


id: GO:0000005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Assists in the correct assembly of ribosomes or ribosomal subunits in vivo, but is not a component of the assembled ribosome when performing its normal biological function.","definition_xrefs":["PMID:12150913","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete ribosomal chaperone activity (obsolete GO:0000005)","synonyms":[{"name":"ribosomal chaperone activity","type":"exact"}],"termid":"GO:0000005"}


id: PBO:0081300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 81","termid":"PBO:0081300"}


id: GO:1900139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of arachidonic acid secretion.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of icosanoid secretion","termid":"GO:0032304"},{"relation_name":"is_a","term_name":"regulation of arachidonate secretion","termid":"GO:0090237"},{"relation_name":"negatively_regulates","term_name":"arachidonate secretion","termid":"GO:0050482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of arachidonate secretion","synonyms":[{"name":"down regulation of arachidonic acid secretion","type":"exact"},{"name":"down-regulation of arachidonic acid secretion","type":"exact"},{"name":"downregulation of arachidonic acid secretion","type":"exact"},{"name":"inhibition of arachidonic acid secretion","type":"narrow"},{"name":"negative regulation of arachidonic acid secretion","type":"exact"}],"termid":"GO:1900139"}


id: PBO:0044649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin subunit 1","termid":"PBO:0044649"}


id: PR:Q9UUA5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC409.19c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUA5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin-like protein C409.19c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.19c","synonyms":[{"name":"Spom972h-SPBC409.19c","type":"exact"}],"termid":"PR:Q9UUA5"}


id: PBO:0036512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tricalbin, C2 domain protein (phospholipid binding) ER-plasma membrane tethering protein Tcb1 (predicted)","termid":"PBO:0036512"}


id: PBO:0069756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1039, pseudogene","termid":"PBO:0069756"}


id: PBO:0038309
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein_degradation","termid":"PBO:0038309"}


id: PBO:0030398
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_cellular_response_to_nitrogen_starvation","termid":"PBO:0030398"}


id: PBO:0069918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1210, pseudogene","termid":"PBO:0069918"}


id: PATO:0001632
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the front of an organism relative to another entity.","definition_xrefs":["PATOC:nw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior to","synonyms":[{"name":"preceding","type":"exact"},{"name":"ventral_to","type":"exact"}],"termid":"PATO:0001632"}


id: GO:0002311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a gamma-delta T cell population by cell division as part of an immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-delta T cell activation involved in immune response","termid":"GO:0002290"},{"relation_name":"is_a","term_name":"T cell proliferation involved in immune response","termid":"GO:0002309"},{"relation_name":"is_a","term_name":"gamma-delta T cell proliferation","termid":"GO:0046630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gamma-delta T cell proliferation involved in immune response","synonyms":[{"name":"gamma-delta T cell proliferation during immune response","type":"related"},{"name":"gamma-delta T lymphocyte proliferation during immune response","type":"related"},{"name":"gamma-delta T-cell proliferation during immune response","type":"related"},{"name":"gamma-delta T-lymphocyte proliferation during immune response","type":"related"}],"termid":"GO:0002311"}


id: GO:0019066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The translocation of an entire virus particle across the host cell plasma membrane.","definition_xrefs":["ISBN:0781702534"],"gene_count":0,"genotype_count":0,"name":"obsolete translocation of virus into host cell (obsolete GO:0019066)","synonyms":[{"name":"translocation of virus into host cell","type":"exact"},{"name":"viral translocation","type":"exact"}],"termid":"GO:0019066"}


id: PBO:0087181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit A14","termid":"PBO:0087181"}


id: GO:0010380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of chlorophyll, any compound of magnesium complexed in a porphyrin (tetrapyrrole) ring and which functions as a photosynthetic pigment, from less complex precursors.","definition_xrefs":["PMID:17291312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chlorophyll metabolic process","termid":"GO:0090056"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process","termid":"GO:1901463"},{"relation_name":"regulates","term_name":"chlorophyll biosynthetic process","termid":"GO:0015995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"regulation of chlorophyll biosynthetic process","termid":"GO:0010380"}


id: GO:0060115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes committed to become a vestibular receptor cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear receptor cell fate commitment","termid":"GO:0060120"},{"relation_name":"part_of","term_name":"vestibular receptor cell differentiation","termid":"GO:0060114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibular receptor cell fate commitment","synonyms":[{"name":"vestibular hair cell fate commitment","type":"exact"}],"termid":"GO:0060115"}


id: PBO:0073923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 16 member 12","termid":"PBO:0073923"}


id: PBO:0081716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 644","termid":"PBO:0081716"}


id: PBO:0001169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Erp2/3/4 (predicted)","termid":"PBO:0001169"}


id: PBO:0030931
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_pyruvate_dehydrogenase_activity","termid":"PBO:0030931"}


id: PBO:0029341
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_nickel","termid":"PBO:0029341"}


id: PBO:0079123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid stimulating hormone subunit beta","termid":"PBO:0079123"}


id: GO:0097751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of generating a spore-bearing structure. A spore-bearing structure is an anatomical structure that produces new spores.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"},{"relation_name":"part_of","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spore-bearing structure formation","synonyms":[{"name":"sporangium formation","type":"broad"},{"name":"sporophore formation","type":"exact"}],"termid":"GO:0097751"}


id: FYPO:0007755
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the spindle is shorter than normal during metaphase of meiosis I.","definition_xrefs":["PomBase:mah","PMID:32723864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short meiotic spindle","termid":"FYPO:0000735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0000002","FYPO:0000054","FYPO:0005447","FYPO:0000120","FYPO:0001985"],"is_obsolete":false,"name":"short meiotic spindle during metaphase I","synonyms":[{"name":"short meiosis I spindle during metaphase","type":"exact"},{"name":"short spindle during meiotic metaphase I","type":"exact"},{"name":"short spindle during metaphase of meiosis I","type":"exact"}],"termid":"FYPO:0007755"}


id: PBO:0090975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxo-5-alpha-steroid 4-dehydrogenase","termid":"PBO:0090975"}


id: GO:0004237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of dipeptides.","definition_xrefs":["EC:3.4.13.19"],"gene_count":0,"genotype_count":0,"name":"obsolete membrane dipeptidase activity (obsolete GO:0004237)","secondary_identifiers":["MetaCyc:3.4.13.19-RXN"],"synonyms":[{"name":"DPH I activity","type":"narrow"},{"name":"MDP","type":"related"},{"name":"aminodipeptidase activity","type":"related"},{"name":"dehydropeptidase I (DPH I)","type":"related"},{"name":"dehydropeptidase I activity","type":"related"},{"name":"dipeptide hydrolase","type":"broad"},{"name":"dipeptidyl hydrolase activity","type":"related"},{"name":"glycosyl-phosphatidylinositol-anchored renal dipeptidase activity","type":"related"},{"name":"membrane dipeptidase activity","type":"exact"},{"name":"microsomal dipeptidase activity","type":"narrow"},{"name":"nonspecific dipeptidase activity","type":"related"},{"name":"renal dipeptidase activity","type":"narrow"}],"termid":"GO:0004237"}


id: PBO:0044477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 20 subfamily A member 1","termid":"PBO:0044477"}


id: PBO:0078495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon GAT) 1-2","termid":"PBO:0078495"}


id: PBO:0082488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalase A; breaks down hydrogen peroxide in the peroxisomal matrix formed by acyl-CoA oxidase (Pox1p) during fatty acid beta-oxidation","termid":"PBO:0082488"}


id: FYPO:0000928
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[115264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}],"single_locus_phenotype":[{"annotations":[115282,115283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000731"},{"annotations":[115265,115261,115253,115254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007177"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell periphery during vegetative growth","termid":"FYPO:0005570"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex","termid":"FYPO:0006867"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_01665":null,"SJAG_02392":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04498":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_02392"],"name":"abnormal protein localization to cell cortex during vegetative growth","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"single_locus_genotype_uniquenames":["pom1delta","mid1delta"],"synonyms":[{"name":"abnormal protein localisation to cell cortex during vegetative growth","type":"exact"},{"name":"abnormal protein localization to cell cortex during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000928","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000731":null,"FYPO:0007177":null,"FYPO_EXT:0000001":null}}


id: GO:1990416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a brain-derived neurotrophic factor stimulus.","definition_xrefs":["PMID:21958434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nerve growth factor stimulus","termid":"GO:1990090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to brain-derived neurotrophic factor stimulus","synonyms":[{"name":"cellular response to BDNF stimulus","type":"exact"}],"termid":"GO:1990416"}


id: GO:0051281
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the release into the cytosolic compartment of calcium ions sequestered in the endoplasmic reticulum or mitochondria.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of release of sequestered calcium ion into cytosol","termid":"GO:0051279"},{"relation_name":"is_a","term_name":"positive regulation of calcium ion transmembrane transport","termid":"GO:1904427"},{"relation_name":"positively_regulates","term_name":"release of sequestered calcium ion into cytosol","termid":"GO:0051209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of release of sequestered calcium ion into cytosol","synonyms":[{"name":"activation of release of sequestered calcium ion into cytosol","type":"narrow"},{"name":"positive regulation of calcium ion (Ca2+) mobilization","type":"broad"},{"name":"positive regulation of calcium mobilization","type":"broad"},{"name":"positive regulation of cytoplasmic release of sequestered calcium ion (Ca2+)","type":"broad"},{"name":"positive regulation of cytoplasmic release of stored calcium ion (Ca2+)","type":"broad"},{"name":"positive regulation of cytosolic release of sequestered calcium ion (Ca2+)","type":"exact"},{"name":"positive regulation of cytosolic release of stored calcium ion (Ca2+)","type":"exact"},{"name":"positive regulation of release of sequestered calcium ion (Ca2+)","type":"broad"},{"name":"positive regulation of release of sequestered calcium ion into cytoplasm","type":"broad"},{"name":"positive regulation of release of stored calcium ion (Ca2+)","type":"broad"},{"name":"positive regulation of release of stored calcium ion (Ca2+) into cytoplasm","type":"broad"},{"name":"positive regulation of release of stored calcium ion (Ca2+) into cytosol","type":"exact"},{"name":"stimulation of release of sequestered calcium ion into cytosol","type":"narrow"},{"name":"up regulation of release of sequestered calcium ion into cytosol","type":"exact"},{"name":"up-regulation of release of sequestered calcium ion into cytosol","type":"exact"},{"name":"upregulation of release of sequestered calcium ion into cytosol","type":"exact"}],"termid":"GO:0051281"}


id: PBO:0064253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing A2","termid":"PBO:0064253"}


id: GO:0003358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a noradrenergic neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron development","termid":"GO:0048666"},{"relation_name":"part_of","term_name":"noradrenergic neuron differentiation","termid":"GO:0003357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"noradrenergic neuron development","synonyms":[{"name":"norepinephrine secreting neuron development","type":"exact"}],"termid":"GO:0003358"}


id: PBO:0048097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 18","termid":"PBO:0048097"}


id: PBO:0046188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"engulfment and cell motility 2 pseudogene 1","termid":"PBO:0046188"}


id: PBO:0043463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 4","termid":"PBO:0043463"}


id: SO:0002363
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes for mitochondrial rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"mt_gene","termid":"SO:0000088"},{"relation_name":"is_a","term_name":"rRNA_gene","termid":"SO:0001637"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mt_rRNA_gene","synonyms":[{"name":"mitochondrial rRNA gene","type":"exact"}],"termid":"SO:0002363"}


id: PBO:0082754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the septin ring, required for cytokinesis; septins are GTP-binding proteins that assemble into rod-like hetero-oligomers that can associate to form filaments; septin rings at the mother-bud neck act as scaffolds for recruiting cell division factors and as barriers to prevent diffusion of specific proteins between mother and daughter cells; N-terminus interacts with phosphatidylinositol-4,5-bisphosphate; protein abundance increases under DNA damage stress","termid":"PBO:0082754"}


id: PBO:0070005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1301, pseudogene","termid":"PBO:0070005"}


id: PBO:0055335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2763","termid":"PBO:0055335"}


id: FYPO:0002822
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is decreased during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle pole body","termid":"FYPO:0000940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle pole body during mitosis","synonyms":[{"name":"decreased protein localisation to mitotic spindle pole body during mitosis","type":"exact"},{"name":"decreased protein localization to mitotic SPB during mitosis","type":"exact"},{"name":"decreased protein localization to mitotic spindle pole body during M-phase","type":"related"},{"name":"decreased protein localization to mitotic spindle pole body during mitotic M phase","type":"related"},{"name":"decreased protein localization to mitotic spindle pole body during mitotic nuclear division","type":"exact"},{"name":"decreased protein localization to spindle pole body during mitosis during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitotic spindle pole body during mitosis","type":"exact"}],"termid":"FYPO:0002822"}


id: PBO:0030482
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ferrichrome_absent_from_cell","termid":"PBO:0030482"}


id: GO:1905699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xenobiotic transmembrane export. A xenobiotic is a compound foreign to the organism exposed to it. It may be synthesized by another organism (like ampicilin) or it can be a synthetic chemical.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:krc","PMID:15198509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"is_a","term_name":"regulation of response to drug","termid":"GO:2001023"},{"relation_name":"regulates","term_name":"xenobiotic detoxification by transmembrane export across the plasma membrane","termid":"GO:1990961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of xenobiotic detoxification by transmembrane export across the plasma membrane","synonyms":[{"name":"regulation of drug transmembrane export","type":"narrow"},{"name":"regulation of xenobiotic transmembrane export","type":"narrow"}],"termid":"GO:1905699"}


id: PBO:0086934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab family GTPase; involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; YPT31 has a paralog, YPT32, that arose from the whole genome duplication; localizes to the transitional and late Golgi","termid":"PBO:0086934"}


id: GO:0005346
data:
  {"annotated_genes":["SJAG_03452","SJAG_03334","SJAG_02050","SJAG_00612","SJAG_04325"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046964"},{"annotations":[97415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902557"},{"annotations":[102749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008521"},{"annotations":[106954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[98921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[86887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015228"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a purine ribonucleotide, any compound consisting of a purine ribonucleoside (a purine organic base attached to a ribose sugar) esterified with (ortho)phosphate, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide transmembrane transporter activity","termid":"GO:0015216"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00612":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_04325":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"purine ribonucleotide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0005346","terms_by_termid":{"GO:0005471":null,"GO:0008521":null,"GO:0015228":null,"GO:0046964":null,"GO:0140987":null,"GO:1902557":null}}


id: PBO:0052941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 25-1","termid":"PBO:0052941"}


id: PBO:0049049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 42","termid":"PBO:0049049"}


id: PBO:0108991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stabilizer of axonemal microtubules 3","termid":"PBO:0108991"}


id: GO:0072383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a vesicle towards the plus end of a microtubule, mediated by motor proteins. This process begins with the attachment of a vesicle to a microtubule, and ends when the vesicle reaches its final destination.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle transport along microtubule","termid":"GO:0047496"},{"relation_name":"is_a","term_name":"plus-end-directed organelle transport along microtubule","termid":"GO:0072386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"plus-end-directed vesicle transport along microtubule","synonyms":[{"name":"microtubule plus-end-directed vesicle distribution","type":"narrow"},{"name":"microtubule plus-end-directed vesicle localization","type":"exact"}],"termid":"GO:0072383"}


id: PBO:0013833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein A3","termid":"PBO:0013833"}


id: PBO:0038962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADM divergent transcript","termid":"PBO:0038962"}


id: PBO:0063240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 5","termid":"PBO:0063240"}


id: GO:0002248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events leading to growth of connective tissue when loss of tissues that are incapable of regeneration occurs, or when fibrinous exudate cannot be adequately cleared, as part of an inflammatory response.","definition_xrefs":["GOC:jal","PMID:9639571"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue replacement","termid":"GO:0097709"},{"relation_name":"part_of","term_name":"wound healing involved in inflammatory response","termid":"GO:0002246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"connective tissue replacement involved in inflammatory response wound healing","synonyms":[{"name":"connective tissue replacement during inflammatory response","type":"related"},{"name":"fibrosis during inflammatory response","type":"narrow"},{"name":"tissue fibrosis development","type":"narrow"}],"termid":"GO:0002248"}


id: GO:0000483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage of a pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small SubUnit (SSU) rRNA, the 5.8S rRNA, 2S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript. Primary ribosomal RNA transcripts with four genes, in this order, are produced in the nuclei of D. melanogaster as well as in those of other dipteran species.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0044085","GO:0008150","GO:0042254"],"is_obsolete":false,"name":"endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000483"}


id: GO:0036368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The processes required for a cone photoreceptor to recover, following light activation, so that it can respond to a subsequent light stimulus. Cone recovery requires the shutoff of active participants in the phototransduction cascade, including the visual pigment and downstream signal transducers.","definition_xrefs":["PMID:16039565","GOC:gap","PMID:22802362"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light stimulus","termid":"GO:0009416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cone photoresponse recovery","synonyms":[{"name":"cone phototransduction termination","type":"related"},{"name":"cone response recovery","type":"exact"}],"termid":"GO:0036368"}


id: PBO:0029663
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_endodeoxyribonuclease_activity","termid":"PBO:0029663"}


id: GO:0018551
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: [DsrC protein]-trisulfide + 3 H2O + NAD+ = [DsrC protein]-dithiol + 3 H+ + NADH + sulfite.","definition_xrefs":["RHEA:78943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"dissimilatory sulfite reductase activity","secondary_identifiers":["MetaCyc:RXN-17803","EC:1.8.1.22"],"synonyms":[{"name":"siroheme sulfite reductase activity","type":"related"}],"termid":"GO:0018551"}


id: FYPO:0002257
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the fungal-type vacuole is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuole","termid":"FYPO:0002794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal vacuolar morphology","synonyms":[{"name":"abnormal vacuole morphology","type":"exact"},{"name":"vacuolar morphology: abnormal","type":"related"}],"termid":"FYPO:0002257"}


id: FYPO:0002378
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are viable but have a greater length, diameter, and volume than normal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable swollen vegetative cell population (obsolete FYPO:0002378)","synonyms":[{"name":"viable enlarged vegetative cell population","type":"related"},{"name":"viable large vegetative cell population","type":"related"},{"name":"viable vegetative cell population with increased cell size","type":"related"},{"name":"viable vegetative cell population with increased cell volume","type":"exact"}],"termid":"FYPO:0002378"}


id: PR:Q10190
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A large subunit GTPase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11089:SF7","OMA:SCHPO01196","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"large subunit GTPase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.16c","secondary_identifiers":["UniProtKB:Q10190"],"synonyms":[{"name":"Spom972h-LSG1","type":"exact"}],"termid":"PR:Q10190"}


id: GO:0031623
data:
  {"annotated_genes":["SJAG_03250"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72085],"is_not":false,"summary":null,"term":"GO:0031623"}]},"cv_name":"biological_process","definition":"A receptor-mediated endocytosis process that results in the movement of receptors from the plasma membrane to the inside of the cell. The process begins when cell surface receptors are monoubiquitinated following ligand-induced activation. Receptors are subsequently taken up into endocytic vesicles from where they are either targeted to the lysosome or vacuole for degradation or recycled back to the plasma membrane.","definition_xrefs":["GOC:signaling","GOC:mah","PMID:15006537","PMID:19643732","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor-mediated endocytosis","termid":"GO:0006898"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03250":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"receptor internalization","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0031623","terms_by_termid":{"GO:0031623":null}}


id: GO:1900206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pronephric nephron tubule development.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"pronephric nephron tubule development","termid":"GO:0039020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pronephric nephron tubule development","termid":"GO:1900206"}


id: GO:0140623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly from its constituent parts of a type I pilus.","definition_xrefs":["PMID:1679330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilus assembly","termid":"GO:0009297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"type I pilus assembly","synonyms":[{"name":"T1P assembly","type":"broad"},{"name":"type 1 pilus biogenesis","type":"exact"},{"name":"type I fimbria assembly","type":"exact"},{"name":"type I fimbria biogenesis","type":"exact"},{"name":"type I fimbriae assembly","type":"exact"},{"name":"type I fimbriae biogenesis","type":"exact"},{"name":"type I fimbrial assembly","type":"exact"},{"name":"type I fimbrial biogenesis","type":"exact"},{"name":"type I fimbrium assembly","type":"exact"},{"name":"type I fimbrium biogenesis","type":"exact"}],"termid":"GO:0140623"}


id: FYPO:0007009
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which assembly of heterochromatin mediated by small RNA is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin assembly by small RNA","termid":"FYPO:0000187"},{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000641","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased heterochromatin assembly by small RNA","synonyms":[{"name":"decreased RNAi-mediated chromatin silencing","type":"exact"},{"name":"decreased chromatin silencing by small RNA","type":"exact"},{"name":"decreased heterochromatin assembly by small RNA during mitotic cell cycle","type":"related"},{"name":"decreased heterochromatin assembly by small RNA during vegetative growth","type":"exact"},{"name":"reduced heterochromatin assembly by small RNA","type":"exact"}],"termid":"FYPO:0007009"}


id: GO:0016352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete insecticide susceptibility/resistance (obsolete GO:0016352)","synonyms":[{"name":"insecticide susceptibility/resistance","type":"exact"}],"termid":"GO:0016352"}


id: GO:1902919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(5-hydroxyvalerate).","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie","PMID:21705209","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly(5-hydroxyvalerate) metabolic process","termid":"GO:1902918"},{"relation_name":"is_a","term_name":"poly(hydroxyvalerate) biosynthetic process","termid":"GO:1902921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(5-hydroxyvalerate) biosynthetic process","synonyms":[{"name":"poly(5-hydroxyvalerate) anabolism","type":"exact"},{"name":"poly(5-hydroxyvalerate) biosynthesis","type":"exact"},{"name":"poly(5-hydroxyvalerate) formation","type":"exact"},{"name":"poly(5-hydroxyvalerate) synthesis","type":"exact"}],"termid":"GO:1902919"}


id: PBO:0058645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6774","termid":"PBO:0058645"}


id: PBO:0086417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GTPase; associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation; recruited by ribosomal proteins L17, L35, and L37 to assembling ribosomes after 27SB pre-rRNA is generated, immediately preceding removal of ITS2","termid":"PBO:0086417"}


id: GO:0075271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a fruiting body called zygosporangium is formed. A zygosporangium is a thick-walled structure in which spores are produced, and is characteristic of the Zygomycetes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"zygosporangium development","termid":"GO:0075271"}


id: PBO:0061526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal vesicle trafficking associated 2","termid":"PBO:0061526"}


id: GO:0046391
data:
  {"annotated_genes":["SJAG_04882","SJAG_03811","SJAG_04970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111024,105971,93772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006015"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving 5-phosphoribose 1-diphosphate, also known as 5-phosphoribosyl-1-pyrophosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribose phosphate metabolic process","termid":"GO:0019693"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03811":null,"SJAG_04882":null,"SJAG_04970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"5-phosphoribose 1-diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PRPP-PWY"],"synonyms":[{"name":"5-phosphoribose 1-diphosphate metabolism","type":"exact"},{"name":"PRPP metabolic process","type":"exact"}],"termid":"GO:0046391","terms_by_termid":{"GO:0006015":null}}


id: GO:0102125
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gibberellin A9 + O2 + H+ + NAD(P)H = 16alpha, 17-epoxy gibberellin A9 + H2O + NAD(P).","definition_xrefs":["EC:1.14.-.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"gibberellin A9 16alpha,17 epoxidase activity","secondary_identifiers":["MetaCyc:RXN-11388"],"termid":"GO:0102125"}


id: GO:0060278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ovulation, the release of a mature ovum/oocyte from an ovary.","definition_xrefs":["GOC:dph","GOC:kmv","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"ovulation","termid":"GO:0030728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ovulation","termid":"GO:0060278"}


id: PBO:0045067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLG5 antisense RNA 1","termid":"PBO:0045067"}


id: PBO:0080564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Williams-Beuren syndrome chromosome region 2","termid":"PBO:0080564"}


id: PR:Q92342
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1F8.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F8.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F8.04c","synonyms":[{"name":"Spom972h-SPAC1F8.04c","type":"exact"}],"termid":"PR:Q92342"}


id: GO:0009674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: K+(out) + Na+(out) = K+(in) + Na+(in).","definition_xrefs":["TC:2.A.38.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"potassium:sodium symporter activity","synonyms":[{"name":"high affinity potassium transporter","type":"related"}],"termid":"GO:0009674"}


id: GO:0004800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,5,3'-L-triiodo-L-thyronine + iodide + acceptor + H+ = L-thyroxine + donor-H2.","definition_xrefs":["EC:1.21.99.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"thyroxine 5'-deiodinase activity","secondary_identifiers":["RHEA:19745","MetaCyc:THYROXINE-DEIODINASE-RXN","Reactome:R-HSA-209772","Reactome:R-HSA-350869"],"synonyms":[{"name":"L-thyroxine iodohydrolase (reducing) activity","type":"related"},{"name":"acceptor:3,5,3'-triiodo-L-thyronine oxidoreductase (iodinating)","type":"related"},{"name":"diiodothyronine 5'-deiodinase activity","type":"related"},{"name":"iodothyronine 5'-deiodinase activity","type":"related"},{"name":"iodothyronine outer ring monodeiodinase activity","type":"related"},{"name":"outer ring-deiodinating pathway","type":"exact"},{"name":"thyroxine 5' deiodinase activity","type":"exact"},{"name":"thyroxine deiodinase activity","type":"broad"},{"name":"type I iodothyronine deiodinase activity","type":"narrow"},{"name":"type II iodothyronine deiodinase activity","type":"narrow"}],"termid":"GO:0004800"}


id: PBO:0050930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced transmembrane protein 9 pseudogene","termid":"PBO:0050930"}


id: PR:Q9P7F5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1142.09 gene.","definition_xrefs":["UniProtKB:Q9P7F5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1142.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1142.09","synonyms":[{"name":"Spom972h-SPAC1142.09","type":"exact"}],"termid":"PR:Q9P7F5"}


id: GO:0046152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ommochromes, any of a large group of natural polycyclic pigments commonly found in the Arthropoda, particularly in the ommatidia of the compound eye.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye pigment metabolic process","termid":"GO:0042441"},{"relation_name":"is_a","term_name":"ocellus pigment metabolic process","termid":"GO:0046158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ommochrome metabolic process","synonyms":[{"name":"ommochrome metabolism","type":"exact"}],"termid":"GO:0046152"}


id: PBO:0045695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein light chain Tctex-type 2B","termid":"PBO:0045695"}


id: FYPO:0009100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing glycerol and galactose carbon sources.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0001985","FYPO:0002060","FYPO:0005447","FYPO:0002058","FYPO:0000139"],"is_obsolete":false,"name":"decreased cell population growth on glycerol and galactose carbon source","synonyms":[{"name":"decreased vegetative cell growth on glycerol and galactose carbon source","type":"exact"}],"termid":"FYPO:0009100"}


id: PBO:0063591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEX5L antisense RNA 1","termid":"PBO:0063591"}


id: PBO:0050171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 27","termid":"PBO:0050171"}


id: GO:0031880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 3 somatostatin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatostatin receptor binding","termid":"GO:0031877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 3 somatostatin receptor binding","synonyms":[{"name":"type 3 somatostatin receptor ligand","type":"narrow"}],"termid":"GO:0031880"}


id: PBO:0066504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory factor X2","termid":"PBO:0066504"}


id: GO:1905499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a trichome papilla.","definition_xrefs":["PMID:24014871","GOC:TermGenie","GO_REF:0000079","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"cell projection assembly","termid":"GO:0030031"},{"relation_name":"part_of","term_name":"trichome morphogenesis","termid":"GO:0010090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"trichome papilla formation","synonyms":[{"name":"trichome papilla assembly","type":"related"}],"termid":"GO:1905499"}


id: PBO:0066910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 211","termid":"PBO:0066910"}


id: PBO:0062701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily E member 2","termid":"PBO:0062701"}


id: PBO:0013036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human CCDC174 ortholog","termid":"PBO:0013036"}


id: PBO:0076336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 4","termid":"PBO:0076336"}


id: PBO:0049471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granzyme A pseudogene 1","termid":"PBO:0049471"}


id: PBO:0064913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP4R2 pseudogene 2","termid":"PBO:0064913"}


id: PBO:0041605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CA15 pseudogene 2","termid":"PBO:0041605"}


id: PBO:0002953
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental disorders","termid":"PBO:0002953"}


id: PBO:0050504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox C cluster","termid":"PBO:0050504"}


id: PBO:0038296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"community_curated","termid":"PBO:0038296"}


id: GO:0010727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways involving hydrogen peroxide.","definition_xrefs":["GOC:tb","GOC:dph","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrogen peroxide metabolic process","termid":"GO:0010310"},{"relation_name":"is_a","term_name":"negative regulation of reactive oxygen species metabolic process","termid":"GO:2000378"},{"relation_name":"negatively_regulates","term_name":"hydrogen peroxide metabolic process","termid":"GO:0042743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hydrogen peroxide metabolic process","synonyms":[{"name":"negative regulation of hydrogen peroxide metabolism","type":"exact"}],"termid":"GO:0010727"}


id: PBO:0069504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 771, pseudogene","termid":"PBO:0069504"}


id: PBO:0040376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk subunit d pseudogene 4","termid":"PBO:0040376"}


id: PBO:0067082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 117, pseudogene","termid":"PBO:0067082"}


id: PR:P78875
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tpp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trehalose-phosphatase tpp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.15c","synonyms":[{"name":"SPAC19G12.15c","type":"related"},{"name":"Spom972h-tpp1","type":"exact"},{"name":"TPP tpp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"trehalose-6-phosphate phosphatase tpp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78875"}


id: PBO:0086377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ATPase of the AAA family; interacts with the Sin1p transcriptional repressor in the two-hybrid system","termid":"PBO:0086377"}


id: PBO:0051949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPKB antisense RNA 1","termid":"PBO:0051949"}


id: RO:0002458
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of preys on","direct_ancestors":[{"relation_name":"is_a","term_name":"trophically_interacts_with","termid":"RO:0002438"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preyed_upon_by","termid":"RO:0002458"}


id: PATO:0000244
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000244 ocular reflex (obsolete PATO:0000244)","termid":"PATO:0000244"}


id: FYPO:0002813
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glycerol measured in a cell during a cellular response to salt stress is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular glycerol level during cellular response to osmotic stress","termid":"FYPO:0005457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular glycerol level during cellular response to salt stress","synonyms":[{"name":"decreased cellular glycerol level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"decreased cellular glycerol level during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"decreased glycerol accumulation during cellular response to salt stress","type":"related"},{"name":"reduced cellular glycerol level during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0002813"}


id: SO:0002101
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogenic joining region which closely resembles a known functional imunoglobulin joining gene but in which the coding region has stop codons, frameshift mutations or a mutation that effects the initiation codon that rearranges at the DNA level and codes the joining region of the variable domain of an immunoglobulin chain.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_pseudogene","termid":"SO:0002098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IG_J_pseudogene","synonyms":[{"name":"IG J pseudogene","type":"exact"},{"name":"IG joining pseudogene","type":"exact"},{"name":"IG_joining_pseudogene","type":"exact"},{"name":"Immunoglobulin Joining Pseudogene","type":"exact"},{"name":"Immunoglobulin_Joining_Pseudogene","type":"exact"}],"termid":"SO:0002101"}


id: GO:0042799
data:
  {"annotated_genes":["SJAG_01146"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140943"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + histone H4 L-lysine (position 20) = S-adenosyl-L-homocysteine + histone H4 N6-methyl-L-lysine (position 20). This reaction is the addition of a methyl group to the lysine residue at position 20 of the histone H4 protein.","definition_xrefs":["PMID:12086618"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lysine N-methyltransferase activity","termid":"GO:0016279"},{"relation_name":"is_a","term_name":"histone H4 methyltransferase activity","termid":"GO:0140939"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01146":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016741","GO:0008276","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"histone H4K20 methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5682965","Reactome:R-HSA-2301205"],"synonyms":[{"name":"histone H4 lysine 20-specific methyltransferase activity","type":"exact"},{"name":"histone H4K20 methylase activity","type":"broad"},{"name":"histone H4K20 methylation","type":"exact"},{"name":"histone lysine N-methyltransferase activity (H4-K20 specific)","type":"exact"},{"name":"histone methylase activity (H4-K20 specific)","type":"exact"},{"name":"histone methyltransferase activity (H4-K20 specific)","type":"exact"},{"name":"histone-H4K20 methyltransferase activity","type":"exact"}],"termid":"GO:0042799","terms_by_termid":{"GO:0140943":null}}


id: PBO:0090317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptidase subunit Spc3","termid":"PBO:0090317"}


id: GO:1990218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the abscisic acid levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:17304219"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of abscisic acid levels in host (obsolete GO:1990218)","termid":"GO:1990218"}


id: GO:0015602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + nonpolar amino acid(out) = ADP + phosphate + nonpolar amino acid(in).","definition_xrefs":["EC:3.6.3.22","TC:3.A.1.4.1"],"gene_count":0,"genotype_count":0,"name":"obsolete leucine/isoleucine/valine porter activity (obsolete GO:0015602)","synonyms":[{"name":"leucine/isoleucine/valine porter activity","type":"exact"}],"termid":"GO:0015602"}


id: PBO:0027684
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_curved,_elongated_cell","termid":"PBO:0027684"}


id: PBO:0054813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2226","termid":"PBO:0054813"}


id: PBO:0042053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 113","termid":"PBO:0042053"}


id: PBO:0084982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase; transfers electrons from NADH to ubiquinone in respiratory chain but does not pump protons, in contrast to higher eukaryotic multisubunit respiratory complex I; upon apoptotic stress, is activated in mitochondria by N-terminal cleavage, then translocates to cytoplasm to induce apoptosis; homolog of human AIFM2; yeast NDI1 complements several phenotypes of human cell line with mutated MT-ND4, implicated in Leber hereditary optic neuropathy","termid":"PBO:0084982"}


id: MOD:01661
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to pyruvic acid.","definition_xrefs":["PubMed:3042771","PubMed:8464063","RESID:AA0127#TYR","PubMed:10085076","PubMed:500639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"pyruvic acid","termid":"MOD:01154"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvic acid (Tyr)","synonyms":[{"name":"2-oxopropanoic acid","type":"exact"},{"name":"MOD_RES Pyruvic acid (Tyr)","type":"exact"},{"name":"pyruvic acid","type":"exact"}],"termid":"MOD:01661"}


id: PBO:0056257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MALL pseudogene 2","termid":"PBO:0056257"}


id: PBO:0062376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily A member 19 pseudogene","termid":"PBO:0062376"}


id: GO:0072645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interferon-delta due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["PMID:15546383","GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type I interferon production","termid":"GO:0032606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interferon-delta production","secondary_identifiers":["GO:0072646"],"synonyms":[{"name":"IFN-delta production","type":"exact"},{"name":"IFND production","type":"exact"},{"name":"interferon-delta secretion","type":"narrow"}],"termid":"GO:0072645"}


id: PBO:0079767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin fold modifier 1","termid":"PBO:0079767"}


id: FYPO:0002497
data:
  {"alleles_by_uniquename":{"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which protein modification does not occur. All modifications may be affected, or only modifications of a certain type, or on specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification","termid":"FYPO:0002494"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04551":null},"genotype_count":1,"genotypes_by_uniquename":{"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0002274","FYPO:0002494","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein modification","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_04551"],"single_locus_genotype_uniquenames":["Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abolished protein/peptide modification","type":"exact"},{"name":"absent protein/peptide modification","type":"exact"},{"name":"protein modification abolished","type":"exact"},{"name":"protein/peptide modification: absent","type":"related"}],"termid":"FYPO:0002497","terms_by_termid":{"FYPO:0002033":null}}


id: GO:0001910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of leukocyte mediated cytotoxicity.","definition_xrefs":["PMID:11911826","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte mediated immunity","termid":"GO:0002703"},{"relation_name":"is_a","term_name":"regulation of cell killing","termid":"GO:0031341"},{"relation_name":"regulates","term_name":"leukocyte mediated cytotoxicity","termid":"GO:0001909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of leukocyte mediated cytotoxicity","synonyms":[{"name":"regulation of immune cell mediated cell death","type":"exact"},{"name":"regulation of immune cell mediated cell killing","type":"exact"},{"name":"regulation of immune cell mediated cytotoxicity","type":"exact"},{"name":"regulation of leucocyte mediated cytotoxicity","type":"exact"}],"termid":"GO:0001910"}


id: PBO:0079432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma 1 pseudogene","termid":"PBO:0079432"}


id: GO:1904970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of adjacent microvilli through the formation of Ca(2+)-dependent adhesion links between them, forming a brush border.","definition_xrefs":["GOC:TermGenie","PMID:24725409","GOC:lb","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"brush border assembly","synonyms":[{"name":"brush border formation","type":"exact"}],"termid":"GO:1904970"}


id: GO:0046445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving benzyl isoquinoline alkaloids, compounds with bicyclic N-containing aromatic rings.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoquinoline alkaloid metabolic process","termid":"GO:0033076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"benzyl isoquinoline alkaloid metabolic process","synonyms":[{"name":"benzyl isoquinoline alkaloid metabolism","type":"exact"}],"termid":"GO:0046445"}


id: PBO:0052699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17","termid":"PBO:0052699"}


id: PBO:0073875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 10 member 3","termid":"PBO:0073875"}


id: PBO:0026922
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H4_acetylation","termid":"PBO:0026922"}


id: GO:0008583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an undifferentiated cell acquires the features of a mystery cell. The mystery cells are a precluster of cells that emerge from the compound eye morphogenetic furrow, normally positioned between R3 and R4. They then disappear into the surrounding pool of undifferentiated cells and have no known fate in the mature ommatidium. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["PMID:1295747","ISBN:0632030488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"compound eye morphogenesis","termid":"GO:0001745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mystery cell differentiation","termid":"GO:0008583"}


id: PBO:0085469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prephenate dehydratase; catalyzes the conversion of prephanate to phenylpyruvate, which is a step in the phenylalanine biosynthesis pathway","termid":"PBO:0085469"}


id: GO:0042175
data:
  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id: PBO:0091213
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id: PBO:0031748
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id: PBO:0000271
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id: PBO:0058528
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id: PBO:0069993
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id: PBO:0070061
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id: PBO:0077133
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id: GO:0090578
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id: GO:0021871
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id: PATO:0000345
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id: PBO:0082924
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id: GO:0062112
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id: FYPO:0003139
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