# terms

id: PBO:0012305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit alpha 7, Pre10 (predicted)","termid":"PBO:0012305"}


id: FYPO:0007126
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which microtubule bundle formation that takes place as part of mitotic spindle assembly, and which normally results in a parallel arrangement of microtubules, is abnormal.","definition_xrefs":["PomBase:mah","PMID:31615768","GO:0001578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"},{"relation_name":"is_a","term_name":"abnormal microtubule bundle formation","termid":"FYPO:0002761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000054","FYPO:0001985"],"is_obsolete":false,"name":"abnormal microtubule bundle formation during mitotic spindle assembly","synonyms":[{"name":"abnormal microtubule array formation during mitotic spindle assembly","type":"related"},{"name":"abnormal microtubule bundle formation in spindle during mitotic prophase","type":"related"},{"name":"abnormal microtubule bundle formation involved in mitotic spindle assembly","type":"exact"},{"name":"abnormal mitotic spindle microtubule bundling during prophase","type":"exact"},{"name":"abnormal mitotic spindle microtubule bundling during spindle assembly","type":"related"}],"termid":"FYPO:0007126"}


id: PBO:0056615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYST/Esa1-associated factor 6 pseudogene 1","termid":"PBO:0056615"}


id: PBO:0044771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 53","termid":"PBO:0044771"}


id: PBO:0055770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long non-coding regulator of POU2F2","termid":"PBO:0055770"}


id: PBO:0077235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domain family 1 pseudogene 1","termid":"PBO:0077235"}


id: GO:0023029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a major histocompatibility complex class Ib molecules.","definition_xrefs":["GOC:mtg_signal","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein binding","termid":"GO:0042287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"MHC class Ib protein binding","termid":"GO:0023029"}


id: PBO:0029236
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_actomyosin_contractile_ring_disassembly","termid":"PBO:0029236"}


id: GO:0033888
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-deoxy-beta-D-gluc-4-enuronosyl-(1->3)-N-acetyl-D-galactosamine 6-sulfate + H2O = 4-deoxy-beta-D-gluc-4-enuronosyl-(1->3)-N-acetyl-D-galactosamine + H+ + sulfate.","definition_xrefs":["RHEA:10536","EC:3.1.6.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfuric ester hydrolase activity","termid":"GO:0008484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"chondro-6-sulfatase activity","secondary_identifiers":["MetaCyc:CHONDRO-6-SULFATASE-RXN","KEGG_REACTION:R03518"],"synonyms":[{"name":"4-deoxy-beta-D-gluc-4-enuronosyl-(1,3)-N-acetyl-D-galactosamine-6-sulfate 6-sulfohydrolase activity","type":"related"}],"termid":"GO:0033888"}


id: PBO:0062751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily K member 3 pseudogene","termid":"PBO:0062751"}


id: PBO:0064589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTEH antisense RNA 1","termid":"PBO:0064589"}


id: PBO:0003504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S17 (predicted)","termid":"PBO:0003504"}


id: PBO:0075130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein U11/U12 subunit 35","termid":"PBO:0075130"}


id: PR:Q9P6Q5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01122","PANTHER:PTHR11241:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine 5'-triphosphate nucleotidohydrolase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.05c","secondary_identifiers":["UniProtKB:Q9P6Q5"],"synonyms":[{"name":"Spom972h-DUT","type":"exact"},{"name":"dUTP pyrophosphatase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"dUTPase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6Q5"}


id: GO:0015261
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete lactate channel activity (obsolete GO:0015261)","synonyms":[{"name":"lactate channel activity","type":"exact"}],"termid":"GO:0015261"}


id: GO:1900622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Calcium-mediated signaling that results in positive regulation of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:BHF","GOC:bf","GOC:dgf","GOC:TermGenie","PMID:9407035","PMID:9407036"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling (obsolete GO:1900622)","synonyms":[{"name":"activation of global transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"activation of transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"exact"},{"name":"calcineurin-dependent transcription activation","type":"narrow"},{"name":"calcineurin-dependent transcriptional induction","type":"narrow"},{"name":"calcineurin-mediated activation of transcription","type":"narrow"},{"name":"positive regulation of gene-specific transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"positive regulation of global transcription from Pol II promoter by calcium-mediated signaling","type":"related"},{"name":"positive regulation of transcription from Pol II promoter by calcium-mediated signaling","type":"exact"},{"name":"positive regulation of transcription from RNA polymerase II promoter, global by calcium-mediated signaling","type":"related"},{"name":"stimulation of global transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"exact"},{"name":"up regulation of global transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"up regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"exact"},{"name":"up-regulation of global transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"up-regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"exact"},{"name":"upregulation of global transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"related"},{"name":"upregulation of transcription from RNA polymerase II promoter by calcium-mediated signaling","type":"exact"}],"termid":"GO:1900622"}


id: GO:0031900
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer, i.e. cytoplasm-facing, lipid bilayer of the chromoplast envelope.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid outer membrane","termid":"GO:0009527"},{"relation_name":"is_a","term_name":"chromoplast membrane","termid":"GO:0046862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chromoplast outer membrane","termid":"GO:0031900"}


id: PBO:0078903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 12-1","termid":"PBO:0078903"}


id: PBO:0086139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for mitochondrial ribosome small subunit biogenesis; null mutant is defective in respiration and in maturation of 15S rRNA; protein is localized to the mitochondrial inner membrane; null mutant interacts synthetically with prohibitin (Phb1p)","termid":"PBO:0086139"}


id: PBO:0031822
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_apoptosis","termid":"PBO:0031822"}


id: SO:0000661
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000661 intron_attribute (obsolete SO:0000661)","termid":"SO:0000661"}


id: PBO:0088811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport protein Sft2","termid":"PBO:0088811"}


id: GO:0000104
data:
  {"annotated_genes":["SJAG_01671","SJAG_00260","SJAG_00203"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[86232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016156"},{"annotations":[84886,85251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008177"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: succinate + acceptor = fumarate + reduced acceptor.","definition_xrefs":["RHEA:16357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors","termid":"GO:0016627"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00203":null,"SJAG_00260":null,"SJAG_01671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"succinate dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0019739","KEGG_REACTION:R00412"],"synonyms":[{"name":"fumarate dehydrogenase activity","type":"exact"},{"name":"fumarate reductase activity","type":"exact"},{"name":"fumaric hydrogenase activity","type":"related"},{"name":"succinate oxidoreductase activity","type":"exact"},{"name":"succinic acid dehydrogenase activity","type":"exact"},{"name":"succinic dehydrogenase activity","type":"broad"},{"name":"succinodehydrogenase activity","type":"exact"},{"name":"succinyl dehydrogenase activity","type":"exact"}],"termid":"GO:0000104","terms_by_termid":{"GO:0008177":null,"GO:0016156":null}}


id: PBO:0062681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily A member 2","termid":"PBO:0062681"}


id: FYPO:0001700
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to the receptor agonist GW 7647. Cells stop growing (and may die) at a concentration of GW 7647 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to GW 7647","synonyms":[{"name":"hypersensitive to GW 7647","type":"exact"},{"name":"sensitive to GW 7647 during mitotic cell cycle","type":"related"},{"name":"sensitive to GW 7647 during vegetative growth","type":"exact"}],"termid":"FYPO:0001700"}


id: PBO:0090195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi zinc importer, CDF family, Zrg17","termid":"PBO:0090195"}


id: PBO:0084080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase II; catalyzes the first step of the riboflavin biosynthesis pathway","termid":"PBO:0084080"}


id: GO:0061493
data:
  {"annotated_genes":["SJAG_02795","SJAG_04901","SJAG_02246"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92925,94338,95908],"is_not":false,"summary":null,"term":"GO:0061493"}]},"cv_name":"cellular_component","definition":"One of three laminate structures that form the mitotic spindle pole body; the inner plaque is on the nuclear face of the spindle pole body.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central plaque of spindle pole body","termid":"GO:0005823"},{"relation_name":"part_of","term_name":"mitotic spindle pole body","termid":"GO:0044732"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02246":null,"SJAG_02795":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0005816","GO:0015630"],"is_obsolete":false,"name":"central plaque of mitotic spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061493","terms_by_termid":{"GO:0061493":null}}


id: RO:0002226
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x develops_in y if x is located in y whilst x is developing","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_preceded_by","termid":"RO:0002258"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"develops_in","termid":"RO:0002226"}


id: PBO:0045649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 7","termid":"PBO:0045649"}


id: PBO:0062908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2X 1","termid":"PBO:0062908"}


id: FYPO:0002955
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the transition from G0 phase (quiescence) to G1 is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal G0 to G1 transition","synonyms":[{"name":"abnormal exit from cell quiescence","type":"exact"}],"termid":"FYPO:0002955"}


id: GO:0050390
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-valine + H+ = 2-methylpropanamine + CO2.","definition_xrefs":["EC:4.1.1.14","RHEA:18989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"valine decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R01437","UM-BBD_reactionID:r1052","MetaCyc:VALINE-DECARBOXYLASE-RXN"],"synonyms":[{"name":"L-valine carboxy-lyase (2-methylpropanamine-forming)","type":"related"},{"name":"L-valine carboxy-lyase activity","type":"related"},{"name":"leucine decarboxylase activity","type":"related"}],"termid":"GO:0050390"}


id: PBO:0051448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 4-60","termid":"PBO:0051448"}


id: GO:0047959
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycine + H2O + 2 ferricytochrome c = glyoxylate + NH3 + 2 ferrocytochrome c.","definition_xrefs":["MetaCyc:GLYCINE-DEHYDROGENASE-CYTOCHROME-RXN","EC:1.4.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, cytochrome as acceptor","termid":"GO:0016640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"glycine dehydrogenase (cytochrome) activity","secondary_identifiers":["RHEA:16909"],"synonyms":[{"name":"glycine-cytochrome c reductase activity","type":"related"},{"name":"glycine:ferricytochrome-c oxidoreductase (deaminating)","type":"related"},{"name":"reductase, glycine-cytochrome c","type":"related"}],"termid":"GO:0047959"}


id: PBO:0070162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 76 pseudogene","termid":"PBO:0070162"}


id: PBO:0057961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3682","termid":"PBO:0057961"}


id: GO:0050017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-cysteine + HCN = sulfide + L-3-cyanoalanine.","definition_xrefs":["MetaCyc:L-3-CYANOALANINE-SYNTHASE-RXN","EC:4.4.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"L-3-cyanoalanine synthase activity","secondary_identifiers":["RHEA:17821"],"synonyms":[{"name":"L-cysteine hydrogen-sulfide-lyase (adding HCN)","type":"related"},{"name":"L-cysteine hydrogen-sulfide-lyase (adding hydrogen cyanide; L-3-cyanoalanine-forming)","type":"related"},{"name":"beta-cyano-L-alanine synthase activity","type":"related"},{"name":"beta-cyanoalanine synthase activity","type":"related"},{"name":"beta-cyanoalanine synthetase activity","type":"related"}],"termid":"GO:0050017"}


id: GO:0023068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via the phloem.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via phloem (obsolete GO:0023068)","synonyms":[{"name":"signal transmission via phloem","type":"exact"}],"termid":"GO:0023068"}


id: PBO:0074708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 73B","termid":"PBO:0074708"}


id: PBO:0070486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 21","termid":"PBO:0070486"}


id: GO:2000707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dense core granule biogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"regulation of dense core granule biogenesis","termid":"GO:2000705"},{"relation_name":"positively_regulates","term_name":"dense core granule biogenesis","termid":"GO:0061110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of dense core granule biogenesis","termid":"GO:2000707"}


id: GO:1900481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of diacylglycerol biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"regulation of diacylglycerol biosynthetic process","termid":"GO:1900480"},{"relation_name":"negatively_regulates","term_name":"diacylglycerol biosynthetic process","termid":"GO:0006651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of diacylglycerol biosynthetic process","synonyms":[{"name":"down regulation of diacylglycerol anabolism","type":"exact"},{"name":"down regulation of diacylglycerol biosynthesis","type":"exact"},{"name":"down regulation of diacylglycerol biosynthetic process","type":"exact"},{"name":"down regulation of diacylglycerol formation","type":"exact"},{"name":"down regulation of diacylglycerol synthesis","type":"exact"},{"name":"down-regulation of diacylglycerol anabolism","type":"exact"},{"name":"down-regulation of diacylglycerol biosynthesis","type":"exact"},{"name":"down-regulation of diacylglycerol biosynthetic process","type":"exact"},{"name":"down-regulation of diacylglycerol formation","type":"exact"},{"name":"down-regulation of diacylglycerol synthesis","type":"exact"},{"name":"downregulation of diacylglycerol anabolism","type":"exact"},{"name":"downregulation of diacylglycerol biosynthesis","type":"exact"},{"name":"downregulation of diacylglycerol biosynthetic process","type":"exact"},{"name":"downregulation of diacylglycerol formation","type":"exact"},{"name":"downregulation of diacylglycerol synthesis","type":"exact"},{"name":"inhibition of diacylglycerol anabolism","type":"exact"},{"name":"inhibition of diacylglycerol biosynthesis","type":"exact"},{"name":"inhibition of diacylglycerol biosynthetic process","type":"narrow"},{"name":"inhibition of diacylglycerol formation","type":"exact"},{"name":"inhibition of diacylglycerol synthesis","type":"exact"},{"name":"negative regulation of diacylglycerol anabolism","type":"exact"},{"name":"negative regulation of diacylglycerol biosynthesis","type":"exact"},{"name":"negative regulation of diacylglycerol formation","type":"exact"},{"name":"negative regulation of diacylglycerol synthesis","type":"exact"}],"termid":"GO:1900481"}


id: GO:0070820
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A secretory granule that contains cathepsin and gelatinase and is readily exocytosed upon cell activation; found primarily in mature neutrophil cells.","definition_xrefs":["GOC:BHF","GOC:mah","PMID:12070036","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"tertiary granule","synonyms":[{"name":"gelatinase granule","type":"exact"}],"termid":"GO:0070820"}


id: PBO:0078931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCG) 1-3","termid":"PBO:0078931"}


id: PBO:0004580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallopeptidase Pgp2","termid":"PBO:0004580"}


id: PBO:0026690
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_tamoxifen","termid":"PBO:0026690"}


id: PBO:0043280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 4 member D","termid":"PBO:0043280"}


id: GO:0032700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of production of any member of the interleukin-17 family of cytokines.","definition_xrefs":["PMID:16482511","GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-17 production","termid":"GO:0032660"},{"relation_name":"negatively_regulates","term_name":"interleukin-17 production","termid":"GO:0032620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-17 production","secondary_identifiers":["GO:1905077","GO:0045379"],"synonyms":[{"name":"down regulation of interleukin-17 production","type":"exact"},{"name":"downregulation of interleukin-17 production","type":"exact"},{"name":"inhibition of interleukin-17 production","type":"narrow"},{"name":"negative regulation of CTLA-8 production","type":"narrow"},{"name":"negative regulation of Cytotoxic T-lymphocyte-associated antigen 8 secretion","type":"exact"},{"name":"negative regulation of IL-17 production","type":"exact"},{"name":"negative regulation of interleukin-17 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-17 secretion","type":"narrow"}],"termid":"GO:0032700"}


id: PBO:0040809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICD1 antisense RNA 1","termid":"PBO:0040809"}


id: PBO:0013776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein A1","termid":"PBO:0013776"}


id: PBO:0031081
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_metabolism_phenotype","termid":"PBO:0031081"}


id: PBO:0062712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily I member 2","termid":"PBO:0062712"}


id: PBO:0050782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine receptor 1F","termid":"PBO:0050782"}


id: PBO:0089698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRO1 domain protein Bro1","termid":"PBO:0089698"}


id: PBO:0083109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase required for nonhomologous end-joining (NHEJ); forms stable heterodimer with required cofactor Lif1p, interacts with Nej1p; involved in meiosis, not essential for vegetative growth; mutations in human ortholog lead to ligase IV syndrome and Dubowitz syndrome","termid":"PBO:0083109"}


id: PBO:0027897
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_snRNA_level","termid":"PBO:0027897"}


id: PBO:0087540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RAVE complex (Rav1p, Rav2p, Skp1p); the RAVE complex associates with the V1 domain of the vacuolar membrane (H+)-ATPase (V-ATPase) and promotes assembly and reassembly of the holoenzyme","termid":"PBO:0087540"}


id: PBO:0081106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zyg-11 related cell cycle regulator","termid":"PBO:0081106"}


id: PBO:0046190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELMO domain containing 1","termid":"PBO:0046190"}


id: GO:0046923
data:
  {"annotated_genes":["SJAG_02418"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045015"}]},"cv_name":"molecular_function","definition":"Binding to an endoplasmic reticulum (ER) retention sequence, a specific peptide sequence that ensures a protein is retained within the ER.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal sequence binding","termid":"GO:0005048"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02418":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005048"}],"interesting_parent_ids":["GO:0005488","GO:0005048","GO:0003674"],"is_obsolete":false,"name":"ER retention sequence binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"endoplasmic reticulum retention sequence binding","type":"exact"}],"termid":"GO:0046923","terms_by_termid":{"GO:0045015":null}}


id: PBO:0068601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 52, pseudogene","termid":"PBO:0068601"}


id: PBO:0041243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 116","termid":"PBO:0041243"}


id: GO:0015091
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of ferric iron (Fe(III) or Fe3+) ions from one side of a membrane to the other.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron ion transmembrane transporter activity","termid":"GO:0005381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ferric iron transmembrane transporter activity","termid":"GO:0015091"}


id: PBO:0089368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twinfilin","termid":"PBO:0089368"}


id: PBO:0055314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2742","termid":"PBO:0055314"}


id: PBO:0060550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(P)HX epimerase","termid":"PBO:0060550"}


id: PBO:0057365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ah","termid":"PBO:0057365"}


id: PBO:0036546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved eukaryotic protein, human C6orf136 ortholog","termid":"PBO:0036546"}


id: PBO:0005590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit Dad5","termid":"PBO:0005590"}


id: PBO:0055532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2967","termid":"PBO:0055532"}


id: GO:1900419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular alcohol catabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"alcohol catabolic process","termid":"GO:0046164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of cellular alcohol catabolic process","termid":"GO:1900419"}


id: GO:0050301
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + streptomycin 6-phosphate = phosphate + streptomycin.","definition_xrefs":["RHEA:10688","EC:3.1.3.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"streptomycin-6-phosphatase activity","secondary_identifiers":["KEGG_REACTION:R02228","MetaCyc:STREPTOMYCIN-6-PHOSPHATASE-RXN"],"synonyms":[{"name":"streptomycin 6-phosphate phosphatase activity","type":"related"},{"name":"streptomycin 6-phosphate phosphohydrolase activity","type":"related"},{"name":"streptomycin-6-P phosphohydrolase activity","type":"related"},{"name":"streptomycin-6-phosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0050301"}


id: PBO:0031657
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_pseudohyphal_growth","termid":"PBO:0031657"}


id: GO:0097195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reflex process in which the arrectores pilorum (hair follicle) muscles contract and cause the hair to stand erect.","definition_xrefs":["GOC:BHF","Wikipedia:Pilomotor_reflex","PMID:21335239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reflex","termid":"GO:0060004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pilomotor reflex","synonyms":[{"name":"goosebump reflex","type":"exact"},{"name":"horripilation","type":"exact"},{"name":"piloerection","type":"exact"}],"termid":"GO:0097195"}


id: PBO:0073934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC17A6 divergent transcript","termid":"PBO:0073934"}


id: SO:0000774
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transmissible element containing genes involved in metabolism, analogous to the pathogenicity islands of gram negative bacteria.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomic_island","termid":"SO:0000772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolic_island","synonyms":[{"name":"metabolic island","type":"exact"}],"termid":"SO:0000774"}


id: PBO:0027171
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitotic_spindle_during_mitosis","termid":"PBO:0027171"}


id: MOD:01046
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 3'-chloro-L-tyrosine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monochlorinated L-tyrosine","termid":"MOD:01028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-chloro-L-tyrosine","synonyms":[{"name":"3'-ClTyr","type":"exact"}],"termid":"MOD:01046"}


id: GO:0005506
data:
  {"annotated_genes":["SJAG_04016","SJAG_00717","SJAG_00792","SJAG_03222","SJAG_00642","SJAG_00309","SJAG_03225","SJAG_04054","SJAG_05311","SJAG_00221","SJAG_00532","SJAG_03943","SJAG_04913","SJAG_03509","SJAG_03658","SJAG_04297","SJAG_03862","SJAG_01418","SJAG_03018","SJAG_00827","SJAG_04743"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85727,87856,90124,94910,97594,99466,99858,100818,103433,103586,105918,107777,108494,108600,108861,110471,113437],"is_not":false,"summary":null,"term":"GO:0005506"},{"annotations":[109948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008199"},{"annotations":[96634,97282,100794,89012,109949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008198"}]},"cv_name":"molecular_function","definition":"Binding to an iron (Fe) ion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00309":null,"SJAG_00532":null,"SJAG_00642":null,"SJAG_00717":null,"SJAG_00792":null,"SJAG_00827":null,"SJAG_01418":null,"SJAG_03018":null,"SJAG_03222":null,"SJAG_03225":null,"SJAG_03509":null,"SJAG_03658":null,"SJAG_03862":null,"SJAG_03943":null,"SJAG_04016":null,"SJAG_04054":null,"SJAG_04297":null,"SJAG_04743":null,"SJAG_04913":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0046872"}],"interesting_parent_ids":["GO:0003674","GO:0046872","GO:0005488"],"is_obsolete":false,"name":"iron ion binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"iron binding","type":"exact"}],"termid":"GO:0005506","terms_by_termid":{"GO:0005506":null,"GO:0008198":null,"GO:0008199":null}}


id: PBO:0040477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATXN1 antisense RNA 1","termid":"PBO:0040477"}


id: PR:P0CT34
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT34"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-1 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9.04","synonyms":[{"name":"Spom972h-Tf2-1","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT34"}


id: PBO:0043741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 7A2","termid":"PBO:0043741"}


id: PBO:0089982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanyl-nucleotide exchange factor, meiosis specific","termid":"PBO:0089982"}


id: PBO:0030531
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_L-aminoadipate-semialdehyde_dehydrogenase_activity","termid":"PBO:0030531"}


id: GO:0021720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the superior olivary nucleus. This process pertains to the initial formation of a structure from unspecified parts. In mice, the superior olivary nucleus is a small cylindrical mass on the dorsal surface of the lateral part of the trapezoid body of the pons, and it is situated immediately above the inferior olivary nucleus. It receives projections from the cochlear nucleus and thus is involved in the perception of sound.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:jid","GOC:dgh","GOC:dph","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"pons formation","termid":"GO:0021584"},{"relation_name":"part_of","term_name":"superior olivary nucleus morphogenesis","termid":"GO:0021719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior olivary nucleus formation","termid":"GO:0021720"}


id: PBO:0074152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member E1 pseudogene 1","termid":"PBO:0074152"}


id: GO:0042756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism relating to the intake of liquids, especially water.","definition_xrefs":["GOC:curators","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feeding behavior","termid":"GO:0007631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"drinking behavior","synonyms":[{"name":"drinking behaviour","type":"exact"}],"termid":"GO:0042756"}


id: GO:0000092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase during which the polar microtubules elongate and the two poles of the spindle move farther apart as part of mitosis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic anaphase","termid":"GO:0000090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000090"},{"rel_name":"part_of","termid":"GO:0000087"}],"interesting_parent_ids":["GO:0000090","GO:0000087","GO:0008150"],"is_obsolete":false,"name":"mitotic anaphase B","termid":"GO:0000092"}


id: PBO:0000649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I and III subunit Rpc19","termid":"PBO:0000649"}


id: PBO:0067212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 278, pseudogene","termid":"PBO:0067212"}


id: GO:0061465
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The part of the plasma membrane that contributes to the structure of a hemidesmosome.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane part of hemidesmosome (obsolete GO:0061465)","termid":"GO:0061465"}


id: PBO:0089737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin protease cofactor Nxt3","termid":"PBO:0089737"}


id: PBO:0069902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1193, pseudogene","termid":"PBO:0069902"}


id: PBO:0045572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 22","termid":"PBO:0045572"}


id: FYPO:0005711
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer protein complexes consisting of cyclin B1 and cyclin-dependent kinase 1 (CDK1) than normal.","definition_xrefs":["PomBase:mah","PMID:8087848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cyclin B1-CDK1 complex level","synonyms":[{"name":"cyclin B1-CDK1 complexes present at decreased level","type":"exact"},{"name":"decreased cyclin B1-CDK1 complex level during mitotic cell cycle","type":"related"},{"name":"decreased cyclin B1-CDK1 complex level during vegetative growth","type":"exact"},{"name":"reduced cyclin B1-CDK1 complex level","type":"exact"}],"termid":"FYPO:0005711"}


id: PBO:0006180
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_substance","termid":"PBO:0006180"}


id: PR:O13760
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17A2.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C17A2.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A2.10c","synonyms":[{"name":"Spom972h-SPAC17A2.10c","type":"exact"}],"termid":"PR:O13760"}


id: GO:0070022
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A homodimeric receptor complex that consists of two TGF-beta receptor monomers.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor complex (obsolete GO:0070022)","synonyms":[{"name":"TGF-beta receptor complex","type":"broad"},{"name":"transforming growth factor beta receptor complex","type":"exact"}],"termid":"GO:0070022"}


id: PBO:0085668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in nucleotide excision repair (NER); homologous to RAD4","termid":"PBO:0085668"}


id: PBO:0081672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 594","termid":"PBO:0081672"}


id: GO:0048506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a change in identity of a meristem at a characteristic predetermined time point.","definition_xrefs":["GOC:dph","GOC:jid","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of development, heterochronic","termid":"GO:0040034"},{"relation_name":"is_a","term_name":"regulation of meristem development","termid":"GO:0048509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of timing of meristematic phase transition","termid":"GO:0048506"}


id: GO:0072505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of divalent inorganic anions within an organism or cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete divalent inorganic anion homeostasis (obsolete GO:0072505)","termid":"GO:0072505"}


id: GO:0034633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of retinol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Retinol is vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"terpenoid transport","termid":"GO:0046865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"retinol transport","synonyms":[{"name":"vitamin A1 transport","type":"exact"}],"termid":"GO:0034633"}


id: GO:0099066
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the neuronal dense core vesicle membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of neuronal dense core vesicle membrane (obsolete GO:0099066)","termid":"GO:0099066"}


id: PBO:0110462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACO2 pseudogene 1","termid":"PBO:0110462"}


id: GO:0008462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of proteins to small peptides in the presence of ATP and magnesium. Alpha-casein is the usual test substrate. In the absence of ATP, only oligopeptides shorter than five residues are cleaved, for example, succinyl-Leu-Tyr-NHMec which is cleaved at the Tyr-NHMec bond, and Leu-Tyr-Leu-Tyr-Trp which is cleaved at the second Leu-Typ bond (cleavage of the Tyr-Leu and Tyr-Trp bonds also occurs).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endopeptidase Clp activity (obsolete GO:0008462)","synonyms":[{"name":"ATP-dependent Clp protease","type":"narrow"},{"name":"Clp protease","type":"narrow"},{"name":"ClpP","type":"related"},{"name":"caseinolytic protease activity","type":"related"},{"name":"endopeptidase Clp activity","type":"exact"},{"name":"endopeptidase Ti activity","type":"related"},{"name":"protease Ti activity","type":"related"}],"termid":"GO:0008462"}


id: GO:1900200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mesenchymal cell apoptotic process that is involved in metanephros development.","definition_xrefs":["PMID:17314325","GOC:yaf","GOC:mtg_apoptosis","GOC:mtg_kidney_jan10","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell apoptotic process","termid":"GO:0097152"},{"relation_name":"is_a","term_name":"apoptotic process involved in development","termid":"GO:1902742"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell apoptotic process involved in metanephros development","synonyms":[{"name":"mesenchymal cell apoptosis involved in metanephros development","type":"narrow"}],"termid":"GO:1900200"}


id: GO:0014870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muscle inactivity stimulus.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to inactivity","termid":"GO:0014854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to muscle inactivity","termid":"GO:0014870"}


id: PBO:0053933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1232","termid":"PBO:0053933"}


id: PBO:0002370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II CTD phosphatase Rtr1 (predicted)","termid":"PBO:0002370"}


id: PBO:0083231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely within telomere TEL08L","termid":"PBO:0083231"}


id: PBO:0083669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic reticulum protein; member of DUP380 subfamily of conserved, often subtelomerically-encoded proteins; may contribute to maintenance of ER and nuclear morphology; null mutants have distorted nuclear envelope shape, and discontinuous, misshapen perinuclear ER","termid":"PBO:0083669"}


id: PBO:0062815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 9 pseudogene 6","termid":"PBO:0062815"}


id: GO:0004451
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isocitrate = glyoxylate + succinate.","definition_xrefs":["EC:4.1.3.1","RHEA:13245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"isocitrate lyase activity","secondary_identifiers":["MetaCyc:ISOCIT-CLEAV-RXN","KEGG_REACTION:R00479"],"synonyms":[{"name":"ICL activity","type":"related"},{"name":"isocitrase activity","type":"related"},{"name":"isocitratase activity","type":"related"},{"name":"isocitrate glyoxylate-lyase (succinate-forming)","type":"related"},{"name":"isocitrate glyoxylate-lyase activity","type":"related"},{"name":"isocitritase activity","type":"related"},{"name":"threo-DS-isocitrate glyoxylate-lyase activity","type":"related"}],"termid":"GO:0004451"}


id: GO:0070899
data:
  {"annotated_genes":["SJAG_02302","SJAG_00358","SJAG_04113","SJAG_04367"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88847,104530],"is_not":false,"summary":null,"term":"GO:0070899"},{"annotations":[113037,90324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"}]},"cv_name":"biological_process","definition":"The process in which a uridine in position 34 of a mitochondrial tRNA is post-transcriptionally modified.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA wobble uridine modification","termid":"GO:0002098"},{"relation_name":"is_a","term_name":"mitochondrial tRNA modification","termid":"GO:0070900"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00358":null,"SJAG_02302":null,"SJAG_04113":null,"SJAG_04367":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0010467","GO:0140053","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"mitochondrial tRNA wobble uridine modification","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070899","terms_by_termid":{"GO:0070899":null,"GO:1990799":null}}


id: PBO:0001494
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6 umil/min/mg","termid":"PBO:0001494"}


id: PBO:0064802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 catalytic subunit gamma","termid":"PBO:0064802"}


id: GO:0031064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the removal of acetyl groups from histones.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone deacetylation (obsolete GO:0031064)","synonyms":[{"name":"down regulation of histone deacetylation","type":"exact"},{"name":"down-regulation of histone deacetylation","type":"exact"},{"name":"downregulation of histone deacetylation","type":"exact"},{"name":"inhibition of histone deacetylation","type":"narrow"}],"termid":"GO:0031064"}


id: GO:0031972
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers of a chloroplast envelope.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid intermembrane space","termid":"GO:0009529"},{"relation_name":"part_of","term_name":"chloroplast envelope","termid":"GO:0009941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"chloroplast intermembrane space","synonyms":[{"name":"chloroplast envelope lumen","type":"exact"}],"termid":"GO:0031972"}


id: PBO:0046827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5","termid":"PBO:0046827"}


id: PR:Q9P6J5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1683.05 gene.","definition_xrefs":["UniProtKB:Q9P6J5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized permease C1683.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1683.05","synonyms":[{"name":"Spom972h-SPBC1683.05","type":"exact"}],"termid":"PR:Q9P6J5"}


id: PBO:0053932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1231","termid":"PBO:0053932"}


id: PR:Q9UT95
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A molybdenum transport ATP-binding protein ModF that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01623","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ABC transporter ATP-binding protein C323.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC323.04","secondary_identifiers":["UniProtKB:Q9UT95"],"synonyms":[{"name":"Spom972h-modF","type":"exact"}],"termid":"PR:Q9UT95"}


id: PBO:0027432
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_replication_fork_arrest_at_tRNA_locus","termid":"PBO:0027432"}


id: PATO:0001025
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality that inheres in a bearer by virtue of the bearer's amount of force per unit area it exerts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pressure","termid":"PATO:0001025"}


id: PBO:0034364
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_peramorphosis_relationship_with","termid":"PBO:0034364"}


id: PBO:0002590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-actin capping protein alpha subunit","termid":"PBO:0002590"}


id: PBO:0047651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 4 pseudogene 7","termid":"PBO:0047651"}


id: PBO:0031694
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_import","termid":"PBO:0031694"}


id: PBO:0045349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyldiphosphatase 1","termid":"PBO:0045349"}


id: GO:0031707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an endothelin A receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bombesin receptor binding","termid":"GO:0031705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"endothelin A receptor binding","synonyms":[{"name":"endothelin A receptor ligand","type":"narrow"},{"name":"endothelin-1 receptor binding","type":"exact"}],"termid":"GO:0031707"}


id: GO:0010778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of DNA proceeding from the broken 3' single-strand DNA end that uses the homologous intact duplex as the template resulting in meiotic recombination. Meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA repair synthesis","termid":"GO:0000711"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0006310","GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"meiotic DNA repair synthesis involved in reciprocal meiotic recombination","termid":"GO:0010778"}


id: PR:P0CH06
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubi1 gene.","definition_xrefs":["PRO:DAN","UniProtKB:P0CH06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-60S ribosomal protein L40-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11G7.04","synonyms":[{"name":"SPAC11G7.04","type":"related"},{"name":"Spom972h-ubi1","type":"exact"}],"termid":"PR:P0CH06"}


id: PBO:0050245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 23","termid":"PBO:0050245"}


id: GO:0061914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the multiplication or reproduction of chondrocytes in a growing endochondral bone, resulting in the expansion of a cell population.","definition_xrefs":["PMID:19264869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth plate cartilage chondrocyte proliferation","termid":"GO:0003420"},{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"negative regulation of organ growth","termid":"GO:0046621"},{"relation_name":"negatively_regulates","term_name":"growth plate cartilage chondrocyte proliferation","termid":"GO:0003419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of growth plate cartilage chondrocyte proliferation","termid":"GO:0061914"}


id: GO:0070816
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group on to an amino acid residue in the C-terminal domain of RNA polymerase II. Typically, this occurs during the transcription cycle and results in production of an RNA polymerase II enzyme where the carboxy-terminal domain (CTD) of the largest subunit is extensively phosphorylated, often referred to as hyperphosphorylated or the II(0) form. Specific types of phosphorylation within the CTD are usually associated with specific regions of genes, though there are exceptions. The phosphorylation state regulates the association of specific complexes such as the capping enzyme or 3'-RNA processing machinery to the elongating RNA polymerase complex.","definition_xrefs":["GOC:krc","GOC:mah","PMID:17079683"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylation of RNA polymerase II C-terminal domain (obsolete GO:0070816)","synonyms":[{"name":"CTD domain phosphorylation of RNA polymerase II","type":"exact"},{"name":"generation of II(0) form of RNA polymerase II","type":"exact"},{"name":"generation of hyperphosphorylated CTD of RNA polymerase II","type":"exact"},{"name":"hyperphosphorylation of RNA polymerase II C-terminal domain","type":"exact"}],"termid":"GO:0070816"}


id: PBO:0071970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS6KB2 antisense RNA 1","termid":"PBO:0071970"}


id: GO:0044031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism adds a phosphate group to a protein of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host protein by phosphorylation (obsolete GO:0044031)","termid":"GO:0044031"}


id: FYPO:0001171
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the measured intracellular pH is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular pH","synonyms":[{"name":"decreased cellular pH during mitotic cell cycle","type":"related"},{"name":"decreased cellular pH during vegetative growth","type":"exact"},{"name":"decreased cellular pH level","type":"exact"},{"name":"reduced cellular pH","type":"exact"}],"termid":"FYPO:0001171"}


id: FYPO:0003910
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of retrotransposon nucleocapsid complexes (also called virus-like particles, VLPs) to the nucleus is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during vegetative growth","termid":"FYPO:0001424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished VLP localization to nucleus during vegetative growth","synonyms":[{"name":"VLP localization to nucleus abolished during vegetative growth","type":"exact"},{"name":"abolished VLP localisation to nucleus during vegetative growth","type":"exact"},{"name":"abolished VLP localization in nucleus during vegetative growth","type":"exact"},{"name":"abolished VLP localization to nucleus during vegetative growth during mitotic cell cycle","type":"related"},{"name":"abolished retrotransposon nucleocapsid localization to nucleus during vegetative growth","type":"exact"},{"name":"abolished virus-like particle localization to nucleus during vegetative growth","type":"exact"}],"termid":"FYPO:0003910"}


id: PBO:0065194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRPF4B pseudogene 1","termid":"PBO:0065194"}


id: PBO:0057381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548aw","termid":"PBO:0057381"}


id: GO:0032708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-24 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-24 production","termid":"GO:0032668"},{"relation_name":"negatively_regulates","term_name":"interleukin-24 production","termid":"GO:0032628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-24 production","secondary_identifiers":["GO:0045532"],"synonyms":[{"name":"down regulation of interleukin-24 production","type":"exact"},{"name":"down-regulation of interleukin-24 production","type":"exact"},{"name":"downregulation of interleukin-24 production","type":"exact"},{"name":"inhibition of interleukin-24 production","type":"narrow"},{"name":"negative regulation of IL-24 production","type":"exact"},{"name":"negative regulation of interleukin-24 biosynthetic process","type":"narrow"}],"termid":"GO:0032708"}


id: PBO:0002005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L20 (predicted)","termid":"PBO:0002005"}


id: GO:0045172
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Germline specific intercellular bridge. During cyst formation in insects, ring canals interconnect the cells of the cyst, facilitating the passage of cytoplasmic components between cells.","definition_xrefs":["PMID:9635420","PMID:9655801","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intercellular bridge","termid":"GO:0045171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"germline ring canal","termid":"GO:0045172"}


id: GO:1905655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of artery smooth muscle contraction.","definition_xrefs":["GOC:TermGenie","GOC:rph","PMID:27389411","GOC:BHF","GO_REF:0000058","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vascular associated smooth muscle contraction","termid":"GO:1904694"},{"relation_name":"is_a","term_name":"regulation of artery smooth muscle contraction","termid":"GO:1905654"},{"relation_name":"negatively_regulates","term_name":"artery smooth muscle contraction","termid":"GO:0014824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of artery smooth muscle contraction","synonyms":[{"name":"down regulation of artery smooth muscle contraction","type":"exact"},{"name":"down-regulation of artery smooth muscle contraction","type":"exact"},{"name":"downregulation of artery smooth muscle contraction","type":"exact"},{"name":"inhibition of artery smooth muscle contraction","type":"narrow"}],"termid":"GO:1905655"}


id: PBO:0065787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"queuine tRNA-ribosyltransferase catalytic subunit 1","termid":"PBO:0065787"}


id: GO:0004994
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with somatostatin to initiate a change in cell activity. Somatostatin is a peptide hormone that regulates the endocrine system by signaling via G protein-coupled somatostatin receptors. Somatostatin has two active forms produced by proteolytic cleavage: a 14 amino acid peptide (SST-14) and a 28 amino acid peptide (SST-28).","definition_xrefs":["Wikipedia:Somatostatin","GOC:ai","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"somatostatin receptor activity","synonyms":[{"name":"GHIH receptor activity","type":"exact"},{"name":"SRIF receptor activity","type":"exact"},{"name":"SST receptor activity","type":"exact"},{"name":"growth hormone-inhibiting hormone receptor activity","type":"exact"},{"name":"somatotrophin release inhibiting factor receptor activity","type":"exact"}],"termid":"GO:0004994"}


id: PBO:0077775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM40 pseudogene 2","termid":"PBO:0077775"}


id: GO:1903448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of geraniol.","definition_xrefs":["GO_REF:0000068","PMID:23200656","GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyprenol biosynthetic process","termid":"GO:0016094"},{"relation_name":"is_a","term_name":"monoterpenoid biosynthetic process","termid":"GO:0016099"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"geraniol metabolic process","termid":"GO:1903446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"geraniol biosynthetic process","synonyms":[{"name":"geraniol anabolism","type":"exact"},{"name":"geraniol biosynthesis","type":"exact"},{"name":"geraniol formation","type":"exact"},{"name":"geraniol synthesis","type":"exact"}],"termid":"GO:1903448"}


id: PBO:0090980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protein She9","termid":"PBO:0090980"}


id: PR:Q9UUB3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu18 gene.","definition_xrefs":["UniProtKB:Q9UUB3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.11","synonyms":[{"name":"Spom972h-meu18","type":"exact"}],"termid":"PR:Q9UUB3"}


id: GO:0052643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving chlorophyllides, any chlorophyll lacking the terpenoid side chain such as phytyl or farnesyl.","definition_xrefs":["PMID:7724548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorophyll metabolic process","termid":"GO:0015994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"chlorophyllide metabolic process","synonyms":[{"name":"chlorophyllide metabolism","type":"exact"}],"termid":"GO:0052643"}


id: PBO:0079603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2F-SCLY readthrough (NMD candidate)","termid":"PBO:0079603"}


id: PBO:0051928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit beta like 1","termid":"PBO:0051928"}


id: PBO:0045777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ECSIT signaling integrator","termid":"PBO:0045777"}


id: PBO:0061678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 93","termid":"PBO:0061678"}


id: MOD:00881
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because Unimod entry 465 megerd with 199. Remap to MOD:00552 DiMethyl-CH2D.","definition_xrefs":["Unimod:465","PubMed:9252331"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00881 N-reductive amination-D (obsolete MOD:00881)","termid":"MOD:00881"}


id: GO:0050844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-selenocysteine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-selenocysteine modification","termid":"GO:0050844"}


id: PBO:0077067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THUMP domain containing 3","termid":"PBO:0077067"}


id: PBO:0052213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel regulator","termid":"PBO:0052213"}


id: GO:0072186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the metanephric cap are generated and organized. The metanephric cap is formed by the condensation of metanephric mesenchymal cells surrounding the ureteric bud tip.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metanephric mesenchyme morphogenesis","termid":"GO:0072133"},{"relation_name":"part_of","term_name":"metanephric cap development","termid":"GO:0072185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric cap morphogenesis","termid":"GO:0072186"}


id: PBO:0085218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Palmitoyltransferase subunit; this complex adds a palmitoyl lipid moiety to heterolipidated substrates such as Ras1p and Ras2p through a thioester linkage; palmitoylation is required for Ras2p membrane localization; Palmitoyltransferase is composed of Shr5p and Erf2","termid":"PBO:0085218"}


id: PBO:0091145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-mannosyltransferase II complex subunit Pga1","termid":"PBO:0091145"}


id: PATO:0000296
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000296 speed value (obsolete PATO:0000296)","termid":"PATO:0000296"}


id: PBO:0029942
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_catastrophe_with_cut,_elongated_cell_during_cellular_response_to_hydroxyurea","termid":"PBO:0029942"}


id: PBO:0028851
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_cellular_response_to_UV","termid":"PBO:0028851"}


id: GO:0016600
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains flotillin-1 and flotillin-2, and may contain associated proteins. Flotillins associate into membrane microdomains resembling caveolae.","definition_xrefs":["PMID:17206938","PMID:17600709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"caveola","termid":"GO:0005901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"flotillin complex","termid":"GO:0016600"}


id: GO:0044425
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a membrane, a double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete membrane part (obsolete GO:0044425)","termid":"GO:0044425"}


id: GO:0032344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving aldosterone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of steroid metabolic process","termid":"GO:0019218"},{"relation_name":"is_a","term_name":"regulation of hormone metabolic process","termid":"GO:0032350"},{"relation_name":"regulates","term_name":"aldosterone metabolic process","termid":"GO:0032341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"regulation of aldosterone metabolic process","synonyms":[{"name":"regulation of aldosterone metabolism","type":"exact"}],"termid":"GO:0032344"}


id: PBO:0068113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 420","termid":"PBO:0068113"}


id: GO:0072280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Coordinated organization of groups of cells in the plane of an epithelium that contributes to the shaping of a nephron in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of planar polarity involved in nephron morphogenesis","termid":"GO:0072046"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of planar polarity involved in metanephric nephron morphogenesis","synonyms":[{"name":"establishment of planar cell polarity involved in metanephric nephron morphogenesis","type":"narrow"}],"termid":"GO:0072280"}


id: PBO:0064528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit GL","termid":"PBO:0064528"}


id: GO:0036203
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10beta-hydroxytaxa-4(20),11-dien-5alpha-yl acetate + O2 + NADPH + H+ = 10beta,14beta-dihydroxytaxa-4(20),11-dien-5alpha-yl acetate + NADP+ + H2O.","definition_xrefs":["EC:1.14.13.146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"taxoid 14-beta-hydroxylase activity","secondary_identifiers":["KEGG_REACTION:R09867","RHEA:31971"],"termid":"GO:0036203"}


id: GO:0016719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9,9'-di-cis-zeta-carotene + 2 a quinone = 7,7',9,9'-tetra-cis-lycopene + 2 a quinol.","definition_xrefs":["RHEA:30955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor","termid":"GO:0016635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"9,9'-di-cis-zeta-carotene desaturase activity","secondary_identifiers":["EC:1.3.5.6","MetaCyc:RXN-12242"],"synonyms":[{"name":"carotene 7,8-desaturase activity","type":"related"},{"name":"carotene,hydrogen-donor:oxygen oxidoreductase activity","type":"related"},{"name":"zeta-carotene desaturase activity","type":"related"}],"termid":"GO:0016719"}


id: PBO:0113010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase subunit of imitation-switch (ISWI) class chromatin remodelers; with Ioc3p forms Isw1a complex involved in repression of transcription initiation; with Ioc2p and Ioc4p forms Isw1b complex involved in regulation of transcription elongation; Isw1b recruited to ORFs by H3K36 methylation and acts with Chd1p to prevent trans-histone exchange over coding regions; binds to 3'UTR of HAC1 mRNA and limits its nuclear export attenuating the UPR","termid":"PBO:0113010"}


id: PBO:0035698
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cytokinesis_checkpoint","termid":"PBO:0035698"}


id: PBO:0038831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 4","termid":"PBO:0038831"}


id: GO:0005527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a macrolide, any of a large group of structurally related antibiotics produced by Streptomyces species.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"macrolide binding","termid":"GO:0005527"}


id: GO:0032452
data:
  {"annotated_genes":["SJAG_02401","SJAG_03997","SJAG_03664","SJAG_01465","SJAG_03286","SJAG_03635","SJAG_03041"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[83466,108294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051864"},{"annotations":[113828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140680"},{"annotations":[83467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032453"},{"annotations":[83468,109129,92718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034647"},{"annotations":[108295,113829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032454"},{"annotations":[90144,99294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140683"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a histone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein demethylase activity","termid":"GO:0140457"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01465":null,"SJAG_02401":null,"SJAG_03041":null,"SJAG_03286":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03997":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"histone demethylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5423117","Reactome:R-HSA-5661121","Reactome:R-HSA-5625797","Reactome:R-HSA-4724279","Reactome:R-HSA-5661115","Reactome:R-HSA-5661116","Reactome:R-HSA-5661123","Reactome:R-HSA-4754181","Reactome:R-HSA-5661124","Reactome:R-HSA-5661125","Reactome:R-HSA-4722133","Reactome:R-HSA-5625870","Reactome:R-HSA-4754187","Reactome:R-HSA-5625848","Reactome:R-HSA-3214912","Reactome:R-HSA-5661114","Reactome:R-HSA-4724284","Reactome:R-HSA-5661122","Reactome:R-HSA-5661120","Reactome:R-HSA-4754176"],"termid":"GO:0032452","terms_by_termid":{"GO:0032453":null,"GO:0032454":null,"GO:0034647":null,"GO:0051864":null,"GO:0140680":null,"GO:0140683":null}}


id: GO:0010852
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and decreases the activity of an enzyme that catalyzes a ring closure reaction.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"cyclase regulator activity","termid":"GO:0010851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0030234","GO:0140678","GO:0098772","GO:0003674","GO:0004857"],"is_obsolete":false,"name":"cyclase inhibitor activity","termid":"GO:0010852"}


id: GO:0002169
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A mitochondrial protein complex which is capable of 3-methylcrotonyl-CoA carboxylase activity. In mammals, at least, consists as a dodecamer of 6 alpha and 6 beta subunits. MCCC-alpha has a covalently bound biotin essential for the ATP-dependent carboxylation. MCCC-beta possesses carboxyltransferase activity which presumably is essential for binding to 3-methylcrotonyl-CoA.","definition_xrefs":["GOC:bf","PMID:15868465","PMID:17360195","GOC:hjd","PMID:22869039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"is_a","term_name":"methylcrotonoyl-CoA carboxylase complex","termid":"GO:1905202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575","GO:0005739"],"is_obsolete":false,"name":"3-methylcrotonyl-CoA carboxylase complex, mitochondrial","synonyms":[{"name":"mitochondrial 3-methylcrotonyl-CoA carboxylase holoenzyme","type":"exact"},{"name":"mitochondrial MCCC complex","type":"exact"},{"name":"mitochondrial methylcrotonoyl-CoA carboxylase complex","type":"exact"}],"termid":"GO:0002169"}


id: GO:0038110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-2 binding to its receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-2","termid":"GO:0071352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-2-mediated signaling pathway","synonyms":[{"name":"IL-2-mediated signaling pathway","type":"exact"},{"name":"interleukin-2-mediated signalling pathway","type":"exact"}],"termid":"GO:0038110"}


id: GO:0019288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isopentenyl diphosphate by the mevalonate-independent pathway. Isopentenyl diphosphate (IPP) is the fundamental unit in isoprenoid biosynthesis and is biosynthesized from pyruvate and glyceraldehyde 3-phosphate via intermediates, including 1-deoxy-D-xylulose 5-phosphate.","definition_xrefs":["GOC:go_curators","PMID:18948055","MetaCyc:NONMEVIPP-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isopentenyl diphosphate biosynthetic process","termid":"GO:0009240"},{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate metabolic process","termid":"GO:0019682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway","synonyms":[{"name":"isopentenyl diphosphate anabolism, mevalonate-independent pathway","type":"exact"},{"name":"isopentenyl diphosphate biosynthesis, mevalonate-independent","type":"exact"},{"name":"isopentenyl diphosphate biosynthesis, non-mevalonate pathway","type":"exact"},{"name":"isopentenyl diphosphate biosynthetic process via 1-deoxy-D-xylulose 5-phosphate","type":"exact"},{"name":"isopentenyl diphosphate biosynthetic process, MEP pathway","type":"exact"},{"name":"isopentenyl diphosphate biosynthetic process, mevalonate-independent","type":"exact"},{"name":"isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway","type":"exact"},{"name":"isopentenyl diphosphate biosynthetic process, non-mevalonate pathway","type":"exact"},{"name":"isopentenyl diphosphate formation, mevalonate-independent pathway","type":"exact"},{"name":"isopentenyl diphosphate synthesis, mevalonate-independent pathway","type":"exact"},{"name":"mevalonate-independent isopentenyl diphosphate biosynthesis","type":"exact"},{"name":"mevalonate-independent isopentenyl diphosphate biosynthetic process","type":"exact"},{"name":"non-MVA pathway","type":"exact"}],"termid":"GO:0019288"}


id: PBO:0028319
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitochondrial_fission","termid":"PBO:0028319"}


id: PBO:0050770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIV-1 Tat specific factor 1","termid":"PBO:0050770"}


id: GO:0097085
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An interferon regulatory factor complex that consists of a heterodimer of interferon regulatory factor 3 and interferon regulatory factor 5.","definition_xrefs":["PMID:12138184","GOC:cna"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon regulatory factor complex","termid":"GO:0097071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"interferon regulatory factor 3-interferon regulatory factor 5 complex","synonyms":[{"name":"IRF3:IRF5 complex","type":"exact"}],"termid":"GO:0097085"}


id: MOD:00436
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with an N-acetylhexosamine group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N-acetylhexosaminylated residue","synonyms":[{"name":"HexNAc","type":"exact"},{"name":"N-Acetylhexosamine","type":"related"}],"termid":"MOD:00436"}


id: PBO:0089858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER heat shock protein Lsh1","termid":"PBO:0089858"}


id: PBO:0060139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA translation optimization 1","termid":"PBO:0060139"}


id: GO:0003791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete membrane associated actin binding (obsolete GO:0003791)","synonyms":[{"name":"membrane associated actin binding","type":"exact"}],"termid":"GO:0003791"}


id: GO:0050240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + pyrogallol = (Z)-5-oxohex-2-enedioate + 2 H+.","definition_xrefs":["EC:1.13.11.35","RHEA:19673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pyrogallol 1,2-oxygenase activity","secondary_identifiers":["KEGG_REACTION:R03246","MetaCyc:PYROGALLOL-12-OXYGENASE-RXN"],"synonyms":[{"name":"1,2,3-trihydroxybenzene:oxygen 1,2-oxidoreductase (decyclizing)","type":"related"},{"name":"pyrogallol 1,2-dioxygenase activity","type":"related"}],"termid":"GO:0050240"}


id: PBO:0028667
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_double-strand_break_repair_via_nonhomologous_end_joining","termid":"PBO:0028667"}


id: PBO:0082562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chaperone and import receptor for newly-synthesized class I PMPs; binds peroxisomal membrane proteins (PMPs) in the cytoplasm and delivers them to the peroxisome for subsequent insertion into the peroxisomal membrane; interacts with Myo2p and contributes to peroxisome partitioning","termid":"PBO:0082562"}


id: PBO:0038837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS7 pseudogene 4","termid":"PBO:0038837"}


id: PBO:0074001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 5 pseudogene 2","termid":"PBO:0074001"}


id: PBO:0047776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXC2 antisense RNA 1","termid":"PBO:0047776"}


id: GO:1905221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of platelet formation.","definition_xrefs":["GOC:TermGenie","PMID:10606160","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell morphogenesis","termid":"GO:0010770"},{"relation_name":"is_a","term_name":"positive regulation of myeloid cell differentiation","termid":"GO:0045639"},{"relation_name":"is_a","term_name":"regulation of platelet formation","termid":"GO:1905219"},{"relation_name":"positively_regulates","term_name":"platelet formation","termid":"GO:0030220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of platelet formation","synonyms":[{"name":"activation of platelet extrusion","type":"narrow"},{"name":"activation of platelet formation","type":"narrow"},{"name":"positive regulation of platelet extrusion","type":"exact"},{"name":"up regulation of platelet extrusion","type":"exact"},{"name":"up regulation of platelet formation","type":"exact"},{"name":"up-regulation of platelet extrusion","type":"exact"},{"name":"up-regulation of platelet formation","type":"exact"},{"name":"upregulation of platelet extrusion","type":"exact"},{"name":"upregulation of platelet formation","type":"exact"}],"termid":"GO:1905221"}


id: GO:1905544
data:
  {"annotated_genes":["SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89383],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"The directed movement of L-methionine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GO_REF:0000075","GOC:TermGenie","PMID:17556368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"},{"relation_name":"is_a","term_name":"methionine import across plasma membrane","termid":"GO:1903692"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"L-methionine import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1903813"],"synonyms":[{"name":"L-methionine import into cell","type":"exact"}],"termid":"GO:1905544","terms_by_termid":{"GO:1905626":null}}


id: SO:0001711
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 79th residue (a lysine), from the start of the H3 histone protein is di-methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"H3K79_methylation_site","termid":"SO:0001735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K79_dimethylation_site","synonyms":[{"name":"H3K79 di-methylation site","type":"exact"},{"name":"H3K79Me2","type":"related"}],"termid":"SO:0001711"}


id: PBO:0070937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 45","termid":"PBO:0070937"}


id: FYPO:0007956
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which the duration of microtubule growth events is abnormal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule dynamics during vegetative growth","termid":"FYPO:0000901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"abnormal duration of microtubule growth event","termid":"FYPO:0007956"}


id: PBO:0079203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSR1 ribosome maturation factor","termid":"PBO:0079203"}


id: PBO:0052499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 11","termid":"PBO:0052499"}


id: GO:0140944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl20-[histone H4] + S-adenosyl-L-methionine = H+ + N6-methyl-L-lysyl20-[histone H4] + S-adenosyl-L-homocysteine. This reaction is the addition of a methyl group to the unmethylated lysine residue at position 20 of histone H4, producing histone H4K20me.","definition_xrefs":["RHEA:60344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4K20 methyltransferase activity","termid":"GO:0042799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140096","GO:0016741","GO:0003824","GO:0008276","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"histone H4K20 monomethyltransferase activity","secondary_identifiers":["EC:2.1.1.361"],"synonyms":[{"name":"histone H4-K20 methylation","type":"broad"},{"name":"histone H4K20 methylase activity","type":"broad"},{"name":"histone H4K20 methylation","type":"broad"},{"name":"histone H4K20 monomethylation","type":"exact"},{"name":"histone lysine N-monomethyltransferase activity (H4-K20 specific)","type":"exact"}],"termid":"GO:0140944"}


id: GO:0000960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving catabolism in the mitochondrion of RNA transcribed from the mitochondrial genome.","definition_xrefs":["GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"regulates","term_name":"mitochondrial RNA catabolic process","termid":"GO:0000957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mitochondrial RNA catabolic process","termid":"GO:0000960"}


id: RO:0002518
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has end sequence y if the end of x is identical to the end of y, and x has y as a subsequence","direct_ancestors":[{"relation_name":"is_a","term_name":"has_subsequence","termid":"RO:0002524"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_end_sequence","termid":"RO:0002518"}


id: GO:0010866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of triglyceride biosynthesis. Triglyceride biosynthesis is the collection of chemical reactions and pathways resulting in the formation of triglyceride, any triester of glycerol.","definition_xrefs":["GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular biosynthetic process","termid":"GO:0031326"},{"relation_name":"is_a","term_name":"regulation of lipid biosynthetic process","termid":"GO:0046890"},{"relation_name":"is_a","term_name":"regulation of triglyceride metabolic process","termid":"GO:0090207"},{"relation_name":"regulates","term_name":"triglyceride biosynthetic process","termid":"GO:0019432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of triglyceride biosynthetic process","synonyms":[{"name":"regulation of triacylglycerol biosynthetic process","type":"exact"}],"termid":"GO:0010866"}


id: GO:0055034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the Bolwig's organ over time, from its formation to the mature structure. The larval eye in Drosophila is a relatively simple sensory system composed of Bolwig's organs: two clusters, each composed of 12 photoreceptor cells from which axons extend in a single fascicle to the brain.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye development","termid":"GO:0001654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Bolwig's organ development","termid":"GO:0055034"}


id: GO:0005125
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of a soluble extracellular gene product that interacts with a receptor to effect a change in the activity of the receptor to control the survival, growth, differentiation and effector function of tissues and cells.","definition_xrefs":["ISBN:0198599471","PMID:11530802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0098772","GO:0005488","GO:0140677","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"cytokine activity","synonyms":[{"name":"autocrine activity","type":"related"},{"name":"paracrine activity","type":"related"}],"termid":"GO:0005125"}


id: PBO:0075450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 3","termid":"PBO:0075450"}


id: PBO:0087169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit C82","termid":"PBO:0087169"}


id: PBO:0012234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chalcone related protein family","termid":"PBO:0012234"}


id: PBO:0017645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline/ethanolamine kinase Eki1 (predicted)","termid":"PBO:0017645"}


id: GO:0060396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of growth hormone receptor binding to its physiological ligand.","definition_xrefs":["PMID:11445442","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"},{"relation_name":"part_of","term_name":"cellular response to growth hormone stimulus","termid":"GO:0071378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"growth hormone receptor signaling pathway","synonyms":[{"name":"GH receptor signaling pathway","type":"related"},{"name":"cellular response to growth hormone","type":"related"},{"name":"growth hormone receptor signalling pathway","type":"exact"}],"termid":"GO:0060396"}


id: PBO:0090705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA(Ser) residue 32 (cytosine-3-)-methyltransferase Trm141","termid":"PBO:0090705"}


id: PBO:0075575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindlin family member 4","termid":"PBO:0075575"}


id: PBO:0084989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent aldehyde reductase; utilizes aromatic and alophatic aldehyde substrates; member of the short-chain dehydrogenase/reductase superfamily","termid":"PBO:0084989"}


id: PBO:0086855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative RNA-binding protein; interacts with Mex67p, which is a component of the nuclear pore involved in nuclear mRNA export; MIP6 has a paralog, PES4, that arose from the whole genome duplication","termid":"PBO:0086855"}


id: PBO:0007873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin microtubule-binding subunit, p150-Glued Ssm4","termid":"PBO:0007873"}


id: FYPO:0000315
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube, and undergoes septation, but does not go on to form a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with elongated germ tube","termid":"FYPO:0002379"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"},{"relation_name":"is_a","term_name":"elongated septated vegetative cell","termid":"FYPO:0004750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001985","FYPO:0000005","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with elongated, septated germ tube","synonyms":[{"name":"inviable after spore germination, without cell division, elongated, septated cell","type":"exact"},{"name":"inviable following spore germination with elongated, septated germ tube","type":"exact"},{"name":"inviable germinated spore, without cell division, with elongated, septated germ tube","type":"exact"},{"name":"lethal after spore germination, without cell division, with elongated, septated germ tube","type":"exact"}],"termid":"FYPO:0000315"}


id: GO:0098866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The fusion of the membrane of a multivesicular body with the apical plasma membrane, resulting in release of exosomes from the cell.","definition_xrefs":["PMID:26459596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion to plasma membrane","termid":"GO:0099500"},{"relation_name":"part_of","term_name":"exosomal secretion","termid":"GO:1990182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0016192","GO:0006810","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"multivesicular body fusion to apical plasma membrane","termid":"GO:0098866"}


id: PBO:0088624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH domain RNA-binding protein","termid":"PBO:0088624"}


id: PBO:0044960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 4 like 2","termid":"PBO:0044960"}


id: GO:1900221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amyloid-beta clearance.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"amyloid-beta clearance","termid":"GO:0097242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amyloid-beta clearance","synonyms":[{"name":"regulation of beta-amyloid clearance","type":"exact"}],"termid":"GO:1900221"}


id: PBO:0072316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 2","termid":"PBO:0072316"}


id: PBO:0067418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 535, pseudogene","termid":"PBO:0067418"}


id: PBO:0084960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myo-inositol transporter; member of the sugar transporter superfamily; expressed constitutively; ITR2 has a paralog, ITR1, that arose from the whole genome duplication","termid":"PBO:0084960"}


id: PBO:0002565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF890 family protein","termid":"PBO:0002565"}


id: PBO:0069044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 289, pseudogene","termid":"PBO:0069044"}


id: PBO:0055130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2549","termid":"PBO:0055130"}


id: PBO:0062392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 13 pseudogene","termid":"PBO:0062392"}


id: GO:0102248
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 a 1,2-diacyl-sn-glycerol = a triacyl-sn-glycerol + a 2-monoglyceride.","definition_xrefs":["GOC:pz","EC:2.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"diacylglycerol transacylase activity","secondary_identifiers":["MetaCyc:RXN-12383"],"termid":"GO:0102248"}


id: SO:0001779
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that is found only by individuals that belong to the same pedigree.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_origin","termid":"SO:0001762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pedigree_specific_variant","synonyms":[{"name":"pedigree specific variant","type":"exact"}],"termid":"SO:0001779"}


id: GO:1904899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hepatic stellate cell proliferation.","definition_xrefs":["GOC:TermGenie","PMID:15358192","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fibroblast proliferation","termid":"GO:0048146"},{"relation_name":"is_a","term_name":"regulation of hepatic stellate cell proliferation","termid":"GO:1904897"},{"relation_name":"positively_regulates","term_name":"hepatic stellate cell proliferation","termid":"GO:1990922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hepatic stellate cell proliferation","synonyms":[{"name":"activation of Ito cell proliferation","type":"narrow"},{"name":"activation of hepatic perisinusoidal cell proliferation","type":"narrow"},{"name":"activation of hepatic stellate cell proliferation","type":"narrow"},{"name":"activation of perisinusoidal cell proliferation","type":"narrow"},{"name":"positive regulation of Ito cell proliferation","type":"exact"},{"name":"positive regulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"positive regulation of perisinusoidal cell proliferation","type":"exact"},{"name":"up regulation of Ito cell proliferation","type":"exact"},{"name":"up regulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"up regulation of hepatic stellate cell proliferation","type":"exact"},{"name":"up regulation of perisinusoidal cell proliferation","type":"exact"},{"name":"up-regulation of Ito cell proliferation","type":"exact"},{"name":"up-regulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"up-regulation of hepatic stellate cell proliferation","type":"exact"},{"name":"up-regulation of perisinusoidal cell proliferation","type":"exact"},{"name":"upregulation of Ito cell proliferation","type":"exact"},{"name":"upregulation of hepatic perisinusoidal cell proliferation","type":"exact"},{"name":"upregulation of hepatic stellate cell proliferation","type":"exact"},{"name":"upregulation of perisinusoidal cell proliferation","type":"exact"}],"termid":"GO:1904899"}


id: PBO:0030839
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_adenine_import","termid":"PBO:0030839"}


id: PBO:0076535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 62 pseudogene","termid":"PBO:0076535"}


id: PBO:0055479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2912","termid":"PBO:0055479"}


id: FYPO:0002876
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a lower extent than normal. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"decreased RNA level","termid":"FYPO:0000826"},{"relation_name":"is_a","term_name":"abnormal transcription","termid":"FYPO:0005502"},{"relation_name":"is_a","term_name":"decreased gene expression","termid":"FYPO:0006549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"decreased transcription","synonyms":[{"name":"reduced transcription","type":"exact"}],"termid":"FYPO:0002876"}


id: GO:0052114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The responsive adjustment of an organism to the pH conditions in or around its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete adaptation to host pH environment (obsolete GO:0052114)","synonyms":[{"name":"adaptation to host pH environment","type":"exact"},{"name":"pH tolerance to host environment","type":"exact"}],"termid":"GO:0052114"}


id: FYPO:0006683
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at centromere inner repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation at centromere during vegetative growth","termid":"FYPO:0008070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H3-K9 methylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"normal histone H3 K9 methylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at centromere imr during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 methylation at centromeric inner repeat region during vegetative growth","type":"exact"},{"name":"normal histone H3K9me at centromere inner repeat during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 methylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006683"}


id: GO:0050052
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + leukotriene E(4) + NADPH + O2 = 20-hydroxy-leukotriene E(4) + H2O + NADP+.","definition_xrefs":["EC:1.14.13.34","RHEA:24120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"leukotriene-E4 20-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R04256","MetaCyc:LEUKOTRIENE-E4-20-MONOOXYGENASE-RXN"],"synonyms":[{"name":"(7E,9E,11Z,14Z)-(5S,6R)-6-(cystein-S-yl)-5-hydroxyicosa-7,9,11,14-tetraenoate,NADPH:oxygen oxidoreductase (20-hydroxylating)","type":"related"},{"name":"leukotriene-E(4) omega-hydroxylase activity","type":"related"},{"name":"leukotriene-E4 omega-hydroxylase activity","type":"related"},{"name":"leukotriene-E4 w-hydroxylase activity","type":"exact"}],"termid":"GO:0050052"}


id: GO:0043629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The enzymatic addition of a sequence of adenylyl residues at the 3' end of a non-coding RNA (ncRNA) molecule. In eukaryotes, substrates include nuclear non-coding RNAs such as precursors and a variety of incorrectly processed forms of snRNAs, snoRNAs, rRNAs, and tRNAs, as well as discarded RNA fragments which have been removed from ncRNA primary transcripts. Polyadenylation of precursors is often linked to termination of transcription, but polyadenylation of RNAs targeted for degradation may also occur post-transcriptionally. This polyadenylation is important both for 3'-end processing to produce mature ncRNA species and also for targeting incorrectly processed or discarded RNA molecules for degradation.","definition_xrefs":["PMID:15935758","PMID:15828860","PMID:16374505","GOC:rn","PMID:16431988","PMID:18951092","GOC:dgf","GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete ncRNA polyadenylation (obsolete GO:0043629)","synonyms":[{"name":"non-coding RNA polyadenylation","type":"exact"}],"termid":"GO:0043629"}


id: PBO:0045392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP10 antisense RNA 3","termid":"PBO:0045392"}


id: PBO:0082713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the mitotic exit network; associates with and is required for the activation and Cdc15p-dependent phosphorylation of the Dbf2p kinase; required for cytokinesis and cell separation; component of the CCR4 transcriptional complex; relocalizes from cytoplasm to the nuclear periphery upon DNA replication stress","termid":"PBO:0082713"}


id: FYPO:0006288
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during G2 phase of the mitotic cell cycle is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein level during mitotic G2 phase","synonyms":[{"name":"decreased protein accumulation during mitotic G2 phase","type":"related"},{"name":"decreased protein level during G2 phase of mitotic cell cycle","type":"exact"},{"name":"decreased protein level during mitotic G2 phase during vegetative growth","type":"exact"},{"name":"reduced protein level during mitotic G2 phase","type":"exact"}],"termid":"FYPO:0006288"}


id: MOD:00432
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Covalent modification of, or a change resulting in an alteration of the measured molecular mass of, a peptide or protein amino acid residue with a secondary loss of a neutral trihydrogen phosphate molecular fragment.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue with a secondary neutral loss","termid":"MOD:00431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified residue with neutral loss of phosphate","synonyms":[{"name":"dPhosModRes","type":"exact"}],"termid":"MOD:00432"}


id: GO:0019299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving rhamnose, the hexose 6-deoxy-L-mannose. Rhamnose occurs commonly as a compound of plant glycosides, in polysaccharides of gums and mucilages, and in bacterial polysaccharides. It is also a component of some plant cell wall polysaccharides and frequently acts as the sugar components of flavonoids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"rhamnose metabolic process","synonyms":[{"name":"rhamnose metabolism","type":"exact"}],"termid":"GO:0019299"}


id: PBO:0044217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTTNBP2 N-terminal like","termid":"PBO:0044217"}


id: GO:0021837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The signaling that results in the stimulation of cell movement in the rostral migratory stream.","definition_xrefs":["GOC:dph","GOC:cls","GOC:jid","PMID:12626695","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"is_a","term_name":"signaling","termid":"GO:0023052"},{"relation_name":"part_of","term_name":"postnatal olfactory bulb interneuron migration","termid":"GO:0021827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"motogenic signaling involved in postnatal olfactory bulb interneuron migration","synonyms":[{"name":"motogenic signalling involved in postnatal olfactory bulb interneuron migration","type":"exact"}],"termid":"GO:0021837"}


id: GO:0015743
data:
  {"annotated_genes":["SJAG_02140","SJAG_02011","SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91082],"is_not":false,"summary":null,"term":"GO:0015743"},{"annotations":[97712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098714"},{"annotations":[114520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071423"}]},"cv_name":"biological_process","definition":"The directed movement of malate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4-dicarboxylate transport","termid":"GO:0015740"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01406":null,"SJAG_02011":null,"SJAG_02140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"malate transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial alpha-ketoglutarate/malate transport","type":"related"}],"termid":"GO:0015743","terms_by_termid":{"GO:0015743":null,"GO:0071423":null,"GO:0098714":null}}


id: GO:0042499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the intramembrane proteolysis of a signal peptide, following its removal from a preprotein.","definition_xrefs":["PMID:12077416"],"gene_count":0,"genotype_count":0,"name":"obsolete signal peptide peptidase activity (obsolete GO:0042499)","synonyms":[{"name":"SPP","type":"exact"},{"name":"signal peptide peptidase activity","type":"exact"}],"termid":"GO:0042499"}


id: PBO:0075605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3","termid":"PBO:0075605"}


id: _global:assayed_using
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a phenotype and an entity, such as a gene product that acts as an enzyme or substrate, with which the phenotype was assayed.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assayed_using","termid":"_global:assayed_using"}


id: PBO:0000193
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkali-sensitive linkage","termid":"PBO:0000193"}


id: GO:0042250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of an established polarized embryonic epithelial sheet.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of polarity of embryonic epithelium","termid":"GO:0016332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"maintenance of polarity of embryonic epithelium","termid":"GO:0042250"}


id: FYPO:0005143
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which proteasome core complex binding by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:16096059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein-protein interaction","termid":"FYPO:0000705"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000702"],"is_obsolete":false,"name":"abolished proteasome core complex binding","synonyms":[{"name":"proteasome core complex binding abolished","type":"exact"}],"termid":"FYPO:0005143"}


id: PBO:0067939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 241","termid":"PBO:0067939"}


id: GO:0051654
data:
  {"annotated_genes":["SJAG_02848","SJAG_03416","SJAG_00368"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86957,102632],"is_not":false,"summary":null,"term":"GO:0051654"},{"annotations":[98827],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034643"}]},"cv_name":"biological_process","definition":"The directed movement of the mitochondrion to a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion localization","termid":"GO:0051646"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_02848":null,"SJAG_03416":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of mitochondrion localization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment of mitochondria localization","type":"exact"},{"name":"establishment of mitochondrion localisation","type":"exact"},{"name":"mitochondria positioning","type":"exact"},{"name":"mitochondrial migration","type":"exact"},{"name":"mitochondrion positioning","type":"exact"}],"termid":"GO:0051654","terms_by_termid":{"GO:0034643":null,"GO:0051654":null}}


id: PBO:0026943
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-G2-exit_meiosis_with_abolished_premeiotic_DNA_replication","termid":"PBO:0026943"}


id: PBO:0063327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 pseudogene 3","termid":"PBO:0063327"}


id: GO:0009357
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the transfer of a phosphate from protein N(PI)-phosphohistidine to a sugar molecule. It is enzyme II of the phosphotransferase system.","definition_xrefs":["PMID:2951378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"},{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase complex","termid":"GO:0009357"}


id: GO:0006074
data:
  {"annotated_genes":["SJAG_04483","SJAG_04771","SJAG_01290","SJAG_04668","SJAG_05285","SJAG_02222","SJAG_03587","SJAG_00218","SJAG_04462","SJAG_01288","SJAG_01835","SJAG_04666","SJAG_03705","SJAG_00876","SJAG_00610","SJAG_01787"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[87632,87643,111889,103831,109230,105353,102147,84137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[88463],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0060635"},{"annotations":[83591,88467],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[88452,101391,98911,113979,86828,88469],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"(1->3)-beta-D-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"1,3-beta-D-glucan metabolic process","type":"broad"},{"name":"1,3-beta-D-glucan metabolism","type":"exact"},{"name":"1,3-beta-glucan metabolic process","type":"broad"},{"name":"beta-1,3 glucan metabolic process","type":"exact"},{"name":"beta-1,3 glucan metabolism","type":"exact"}],"termid":"GO:0006074","terms_by_termid":{"GO:0034413":null,"GO:0060635":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: GO:0061236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the mesonephric comma-shaped body is generated and organized. The mesonephric comma-shaped body is the precursor structure to the mesonephric S-shaped body that contributes to the morphogenesis of a nephron in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"comma-shaped body morphogenesis","termid":"GO:0072049"},{"relation_name":"part_of","term_name":"mesonephric nephron morphogenesis","termid":"GO:0061228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric comma-shaped body morphogenesis","termid":"GO:0061236"}


id: PBO:0067960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 262","termid":"PBO:0067960"}


id: PBO:0045276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 27","termid":"PBO:0045276"}


id: GO:0004198
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of nonterminal peptide bonds in a polypeptide chain by a mechanism using a cysteine residue at the enzyme active center, and requiring the presence of calcium.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type endopeptidase activity","termid":"GO:0004197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0008233","GO:0140096","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"calcium-dependent cysteine-type endopeptidase activity","secondary_identifiers":["Reactome:R-HSA-8863012","Reactome:R-HSA-8848658"],"synonyms":[{"name":"calpain activity","type":"narrow"}],"termid":"GO:0004198"}


id: PR:O94317
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mucin-21 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03970","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized serine-rich protein C215.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.13","secondary_identifiers":["UniProtKB:O94317"],"synonyms":[{"name":"Spom972h-MUC21","type":"exact"}],"termid":"PR:O94317"}


id: PBO:0002115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSP chaperone complex subunit Cns1 (predicted)","termid":"PBO:0002115"}


id: GO:0000024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the disaccharide maltose (4-O-alpha-D-glucopyranosyl-D-glucopyranose).","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maltose metabolic process","termid":"GO:0000023"},{"relation_name":"is_a","term_name":"disaccharide biosynthetic process","termid":"GO:0046351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"maltose biosynthetic process","synonyms":[{"name":"malt sugar biosynthesis","type":"exact"},{"name":"malt sugar biosynthetic process","type":"exact"},{"name":"maltose anabolism","type":"exact"},{"name":"maltose biosynthesis","type":"exact"},{"name":"maltose formation","type":"exact"},{"name":"maltose synthesis","type":"exact"}],"termid":"GO:0000024"}


id: PBO:0047411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 2","termid":"PBO:0047411"}


id: GO:0072126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of glomerular mesangial cell proliferation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glomerular mesangial cell proliferation","termid":"GO:0072124"},{"relation_name":"is_a","term_name":"positive regulation of cell proliferation involved in kidney development","termid":"GO:1901724"},{"relation_name":"positively_regulates","term_name":"glomerular mesangial cell proliferation","termid":"GO:0072110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glomerular mesangial cell proliferation","termid":"GO:0072126"}


id: PBO:0075973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STARD13 intronic transcript 1","termid":"PBO:0075973"}


id: PBO:0070658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 29","termid":"PBO:0070658"}


id: GO:0018255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of S-(peptidyl-glycyl)-peptidyl-cysteine cross-links by the formation of a thiolester between cysteine and the carboxy-terminal glycine of ubiquitin and other proteins.","definition_xrefs":["RESID:AA0206","GOC:jh2"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via S-glycyl-L-cysteine (obsolete GO:0018255)","termid":"GO:0018255"}


id: PBO:0089797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human CREG1 ortholog","termid":"PBO:0089797"}


id: PBO:0081714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 639","termid":"PBO:0081714"}


id: GO:0060941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of an epicardial cell to a cardiac fibroblast cell fate and its capacity to differentiate into a cardiac fibroblast. A cardiac fibroblast is a connective tissue cell in the heart which secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac fibroblast cell fate commitment","termid":"GO:0060937"},{"relation_name":"part_of","term_name":"epicardium-derived cardiac fibroblast cell differentiation","termid":"GO:0060938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium-derived cardiac fibroblast cell fate commitment","termid":"GO:0060941"}


id: PBO:0050755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 17","termid":"PBO:0050755"}


id: PBO:0072892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suprabasin","termid":"PBO:0072892"}


id: PBO:0044822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 109E (pseudogene)","termid":"PBO:0044822"}


id: PBO:0070246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 187 pseudogene","termid":"PBO:0070246"}


id: GO:2001014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"skeletal muscle cell differentiation","termid":"GO:0035914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle cell differentiation","termid":"GO:2001014"}


id: GO:0033593
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex formed of BRCA2 and MAGE-D1; may mediate the synergistic activities of the two proteins in regulating cell growth.","definition_xrefs":["PMID:15930293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"BRCA2-MAGE-D1 complex","termid":"GO:0033593"}


id: PBO:0088774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Kri1","termid":"PBO:0088774"}


id: SO:0000081
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_attribute","termid":"SO:0000401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_array_member","synonyms":[{"name":"gene array member","type":"exact"}],"termid":"SO:0000081"}


id: GO:1903974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to macrophage colony-stimulating factor stimulus.","definition_xrefs":["GO_REF:0000058","GOC:nc","GOC:TermGenie","PMID:19100238","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to macrophage colony-stimulating factor","termid":"GO:1903971"},{"relation_name":"is_a","term_name":"regulation of cellular response to macrophage colony-stimulating factor stimulus","termid":"GO:1903972"},{"relation_name":"positively_regulates","term_name":"cellular response to macrophage colony-stimulating factor stimulus","termid":"GO:0036006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to macrophage colony-stimulating factor stimulus","synonyms":[{"name":"activation of cellular response to M-CSF stimulus","type":"narrow"},{"name":"activation of cellular response to macrophage colony-stimulating factor","type":"narrow"},{"name":"activation of cellular response to macrophage colony-stimulating factor stimulus","type":"narrow"},{"name":"positive regulation of cellular response to M-CSF stimulus","type":"exact"},{"name":"positive regulation of cellular response to macrophage colony-stimulating factor","type":"exact"},{"name":"up regulation of cellular response to M-CSF stimulus","type":"exact"},{"name":"up regulation of cellular response to macrophage colony-stimulating factor","type":"exact"},{"name":"up regulation of cellular response to macrophage colony-stimulating factor stimulus","type":"exact"},{"name":"up-regulation of cellular response to M-CSF stimulus","type":"exact"},{"name":"up-regulation of cellular response to macrophage colony-stimulating factor","type":"exact"},{"name":"up-regulation of cellular response to macrophage colony-stimulating factor stimulus","type":"exact"},{"name":"upregulation of cellular response to M-CSF stimulus","type":"exact"},{"name":"upregulation of cellular response to macrophage colony-stimulating factor","type":"exact"},{"name":"upregulation of cellular response to macrophage colony-stimulating factor stimulus","type":"exact"}],"termid":"GO:1903974"}


id: PBO:0028764
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nuclear_periphery_during_cellular_response_to_heat","termid":"PBO:0028764"}


id: PBO:0075589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPINT1 antisense RNA 1","termid":"PBO:0075589"}


id: PBO:0074789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 10","termid":"PBO:0074789"}


id: PBO:0063550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"penta-EF-hand domain containing 1","termid":"PBO:0063550"}


id: PR:O94376
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- srb7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.10","synonyms":[{"name":"Spom972h-srb7","type":"exact"},{"name":"mediator complex subunit 21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"suppressor of RNA polymerase B 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94376"}


id: GO:2001162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H3-K79 methylation.","definition_xrefs":["PMID:12876294"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K79 methylation (obsolete GO:2001162)","synonyms":[{"name":"positive regulation of histone H3 K79 methylation","type":"exact"},{"name":"positive regulation of histone H3K79me","type":"exact"},{"name":"positive regulation of histone lysine H3 K79 methylation","type":"exact"}],"termid":"GO:2001162"}


id: FYPO:0007357
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the cell does not contain a detectable Smp focus.","definition_xrefs":["PomBase:mah","PMID:31811152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"},{"relation_name":"is_a","term_name":"altered level of macromolecular complex","termid":"FYPO:0007316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"Smp focus absent from cell","synonyms":[{"name":"Sme2 focus absent from cell","type":"narrow"},{"name":"Smp dot complex absent from cell","type":"exact"},{"name":"Smp focus absent from cell during meiotic cell cycle","type":"exact"},{"name":"absence of Smp focus","type":"exact"},{"name":"absent Smp focus","type":"exact"}],"termid":"FYPO:0007357"}


id: FYPO:0002839
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to a specific location on a chromosome is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromosome during vegetative growth","termid":"FYPO:0002838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to chromosome during vegetative growth","synonyms":[{"name":"decreased protein localisation to chromosome during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromosome during mitotic cell cycle","type":"related"},{"name":"reduced protein localization to chromosome during vegetative growth","type":"exact"}],"termid":"FYPO:0002839"}


id: PBO:0040274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atonal bHLH transcription factor 8","termid":"PBO:0040274"}


id: PBO:0031248
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_poly(A)+_mRNA_export_from_nucleus","termid":"PBO:0031248"}


id: PBO:0029408
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_frequency_of_conjugation_with_h-_cells","termid":"PBO:0029408"}


id: GO:0016121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of carotenes, hydrocarbon carotenoids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotene metabolic process","termid":"GO:0016119"},{"relation_name":"is_a","term_name":"terpene catabolic process","termid":"GO:0046247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"carotene catabolic process","synonyms":[{"name":"carotene catabolism","type":"exact"},{"name":"carotene degradation","type":"exact"},{"name":"carotene breakdown","type":"exact"}],"termid":"GO:0016121"}


id: PBO:0067347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 444, pseudogene","termid":"PBO:0067347"}


id: FYPO:0008084
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which autophagic degradation of the endoplasmic reticulum is abolished during nitrogen starvation.","definition_xrefs":["PMID:37191320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal reticulophagy","termid":"FYPO:0008083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished reticulophagy during nitrogen starvation","termid":"FYPO:0008084"}


id: PBO:0078566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 50","termid":"PBO:0078566"}


id: GO:0003298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enlargement or overgrowth of all or part of a muscle organ or tissue due to an increase in the size of its muscle cells. Physiological hypertrophy is a normal process during development.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle hypertrophy","termid":"GO:0014896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"physiological muscle hypertrophy","termid":"GO:0003298"}


id: PBO:0078052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 42","termid":"PBO:0078052"}


id: PBO:0068448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 22, pseudogene","termid":"PBO:0068448"}


id: FYPO:0000404
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the duration of progression through the G2/M transition of the mitotic cell cycle is shorter than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased duration of mitotic G2/M phase transition (obsolete FYPO:0000404)","synonyms":[{"name":"cell cycle progression through the G2/M phase transition: increased rate","type":"related"},{"name":"decreased duration of cell cycle progression through mitotic G2/M phase transition","type":"exact"},{"name":"decreased duration of cell cycle progression through mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"increased rate of mitotic G2/M phase transition","type":"related"},{"name":"reduced duration of mitotic G2/M phase transition","type":"exact"}],"termid":"FYPO:0000404"}


id: PBO:0075363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRY-box transcription factor 3","termid":"PBO:0075363"}


id: PBO:0056547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanin concentrating hormone receptor 1","termid":"PBO:0056547"}


id: MOD:01532
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ8plex-113 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ8plex-113 reporter+balance reagent acylated residue","termid":"MOD:01528"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-113 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01532"}


id: PBO:0052147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNIP2 antisense RNA 1","termid":"PBO:0052147"}


id: SO:0000360
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A set of (usually) three nucleotide bases in a DNA or RNA sequence, which together code for a unique amino acid or the termination of translation and are contained within the CDS.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_region","termid":"SO:0000851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"codon","secondary_identifiers":["http://en.wikipedia.org/wiki/Codon"],"termid":"SO:0000360"}


id: GO:0045257
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The enzyme that catalyzes the oxidation of succinate and ubiquinone to fumarate and ubiquinol; involved in aerobic respiration, repressed in anaerobic respiration.","definition_xrefs":["ISBN:0198547684","GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete succinate dehydrogenase complex (ubiquinone) (obsolete GO:0045257)","termid":"GO:0045257"}


id: GO:0042573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A.","definition_xrefs":["PMID:12570742","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoid metabolic process","termid":"GO:0001523"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"retinoic acid metabolic process","synonyms":[{"name":"retinoic acid metabolism","type":"exact"},{"name":"vitamin A1 acid metabolic process","type":"exact"},{"name":"vitamin A1 acid metabolism","type":"exact"}],"termid":"GO:0042573"}


id: FYECO:0000087
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which proline was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ pro","synonyms":[{"name":"proline added","type":"exact"}],"termid":"FYECO:0000087"}


id: PBO:0038623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylcholinesterase (Cartwright blood group)","termid":"PBO:0038623"}


id: PBO:0040295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3","termid":"PBO:0040295"}


id: PBO:0038375
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_negatively_regulated_by","termid":"PBO:0038375"}


id: PBO:0077751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of myb1 like 1 membrane trafficking protein","termid":"PBO:0077751"}


id: PBO:0028399
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_ricinoleic_acid","termid":"PBO:0028399"}


id: MOD:00694
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a halogen atom for a hydrogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"halogen containing residue","synonyms":[{"name":"HalRes","type":"exact"},{"name":"halogenated residue","type":"exact"}],"termid":"MOD:00694"}


id: PBO:0001727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit Dad2","termid":"PBO:0001727"}


id: PBO:0074266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMC5-SMC6 complex localization factor 1","termid":"PBO:0074266"}


id: PATO:0001028
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the rate of change of the bearer's velocity in either speed or direction.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Acceleration"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement quality","termid":"PATO:0001906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acceleration","termid":"PATO:0001028"}


id: GO:1905500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation, arrangement and bonding together of a set of components to form a heteroreceptor complex.","definition_xrefs":["GOC:pad","PMID:24157794","GO_REF:0000079","GOC:PARL","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete heteroreceptor complex assembly (obsolete GO:1905500)","synonyms":[{"name":"heteroreceptor complex formation","type":"exact"}],"termid":"GO:1905500"}


id: GO:0001870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of complement activation by the lectin pathway.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of complement activation, lectin pathway","termid":"GO:0001868"},{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"is_a","term_name":"positive regulation of complement activation","termid":"GO:0045917"},{"relation_name":"positively_regulates","term_name":"complement activation, lectin pathway","termid":"GO:0001867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of complement activation, lectin pathway","synonyms":[{"name":"activation of complement activation, lectin pathway","type":"narrow"},{"name":"positive regulation of complement cascade, lectin pathway","type":"exact"},{"name":"stimulation of complement activation, lectin pathway","type":"narrow"},{"name":"up regulation of complement activation, lectin pathway","type":"exact"},{"name":"up-regulation of complement activation, lectin pathway","type":"exact"},{"name":"upregulation of complement activation, lectin pathway","type":"exact"}],"termid":"GO:0001870"}


id: GO:0021552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the midbrain-hindbrain boundary structure. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:cls","GOC:jid","GO_REF:0000021","PMID:15541513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"midbrain-hindbrain boundary morphogenesis","termid":"GO:0021555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"midbrain-hindbrain boundary structural organization","synonyms":[{"name":"MHB structural organization","type":"exact"},{"name":"isthmus structural organization","type":"related"},{"name":"midbrain-hindbrain boundary structural organisation","type":"exact"}],"termid":"GO:0021552"}


id: PBO:0069931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1224, pseudogene","termid":"PBO:0069931"}


id: PBO:0041075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRINP3 divergent transcript","termid":"PBO:0041075"}


id: PBO:0028218
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_during_cellular_response_to_salt_stress","termid":"PBO:0028218"}


id: GO:0018746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenanthrene-3,4-oxide + H2O = trans-3,4-dihydrodiolphenanthrene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrene-3,4-epoxide hydrolase activity (obsolete GO:0018746)","termid":"GO:0018746"}


id: GO:0032309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of icosanoids, any of a group of C20 polyunsaturated fatty acids from a cell or a tissue.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"},{"relation_name":"is_a","term_name":"icosanoid transport","termid":"GO:0071715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"icosanoid secretion","synonyms":[{"name":"eicosanoid secretion","type":"exact"}],"termid":"GO:0032309"}


id: RO:0008503
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A sub-relation of parasite of in which a parasite steals resources from another organism, usually food or nest material","direct_ancestors":[{"relation_name":"is_a","term_name":"parasite_of","termid":"RO:0002444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kleptoparasite_of","termid":"RO:0008503"}


id: GO:0018955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phenanthrene, a tricyclic aromatic hydrocarbon used in explosives and in the synthesis of dyes and drugs. Although phenanthrene is not mutagenic or carcinogenic, it has been shown to be toxic to marine diatoms, gastropods, mussels, crustaceans, and fish.","definition_xrefs":["GOC:jl","UM-BBD_pathwayID:pha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phenanthrene metabolic process","synonyms":[{"name":"phenanthrene metabolism","type":"exact"}],"termid":"GO:0018955"}


id: PBO:0030627
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_upon_nitrogen_starvation","termid":"PBO:0030627"}


id: PBO:0085111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear ubiquitin protein ligase binding protein; may regulate utilization of nonfermentable carbon sources and endocytosis of plasma membrane proteins; overproduction suppresses chs5 spa2 lethality at high temp; ubiquitinated by Rsp5p, deubiquitinated by Ubp2p; CSR2 has a paralog, ECM21, that arose from the whole genome duplication","termid":"PBO:0085111"}


id: PBO:0059564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1H","termid":"PBO:0059564"}


id: PBO:0056419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCKS like 1","termid":"PBO:0056419"}


id: GO:0090581
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + mannosylglycerate(out) = protein cysteine + mannosylglycerate phosphate(in).","definition_xrefs":["PMID:14645248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0016740","GO:0003674","GO:0003824","GO:0022857"],"is_obsolete":false,"name":"protein-phosphocysteine-mannosylglycerate-phosphotransferase system transporter activity","termid":"GO:0090581"}


id: PBO:0004557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide release factor (predicted)","termid":"PBO:0004557"}


id: PBO:0081012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 46","termid":"PBO:0081012"}


id: GO:0102751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + a glucosyl-glycogenin = (1,4-alpha-D-glucosyl)n-glucosyl glucogenin + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-alpha-D-glucose:glucosyl-glycogenin alpha-D-glucosyltransferase activity (obsolete GO:0102751)","termid":"GO:0102751"}


id: PBO:0004035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA dihydrouridine synthase Dus1 (predicted)","termid":"PBO:0004035"}


id: GO:0160178
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transport of a dipeptide across a membrane; transport is independent of the movement of any other molecular species.","definition_xrefs":["PMID:38507452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uniporter activity","termid":"GO:0015292"},{"relation_name":"is_a","term_name":"dipeptide transmembrane transporter activity","termid":"GO:0071916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"dipeptide uniporter activity","termid":"GO:0160178"}


id: GO:2001158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of proline catabolic process to glutamate.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular catabolic process","termid":"GO:0031331"},{"relation_name":"is_a","term_name":"positive regulation of amine catabolic process","termid":"GO:0033243"},{"relation_name":"is_a","term_name":"positive regulation of glutamate metabolic process","termid":"GO:2000213"},{"relation_name":"is_a","term_name":"positive regulation of proline metabolic process","termid":"GO:2000216"},{"relation_name":"is_a","term_name":"regulation of proline catabolic process to glutamate","termid":"GO:2001156"},{"relation_name":"positively_regulates","term_name":"proline catabolic process to glutamate","termid":"GO:0010133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044248"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044248","GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of proline catabolic process to glutamate","synonyms":[{"name":"positive regulation of proline breakdown to glutamate","type":"exact"},{"name":"positive regulation of proline degradation to glutamate","type":"exact"},{"name":"positive regulation of proline oxidation","type":"related"}],"termid":"GO:2001158"}


id: PBO:0000380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate transporter (predicted)","termid":"PBO:0000380"}


id: GO:0008961
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the prospective N-terminal cysteine residue in an unmodified prolipoprotein.","definition_xrefs":["RHEA:56712","PMID:8051048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyltransferase activity","termid":"GO:0016757"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity","secondary_identifiers":["EC:2.5.1.145"],"termid":"GO:0008961"}


id: PBO:0040116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 3","termid":"PBO:0040116"}


id: FYPO:0003188
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the import of protein into the nucleus is abnormal. Import of all proteins or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal intracellular protein transport during vegetative growth","termid":"FYPO:0000215"},{"relation_name":"is_a","term_name":"abnormal nuclear export","termid":"FYPO:0000506"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during vegetative growth","termid":"FYPO:0001129"},{"relation_name":"is_a","term_name":"abnormal nuclear import","termid":"FYPO:0001217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein import into nucleus during vegetative growth","synonyms":[{"name":"abnormal protein import into nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003188"}


id: PBO:0052747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 39","termid":"PBO:0052747"}


id: PBO:0041905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cbl proto-oncogene","termid":"PBO:0041905"}


id: GO:0044673
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimer which catalyses the reaction of 5-amino-6-(D-ribitylamino)uracil and 4-hydroxyphenylpyruvate to form 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO), an intermediate of coenzyme F420.","definition_xrefs":["PMID:14593448","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase complex","synonyms":[{"name":"FO-synthase complex","type":"exact"}],"termid":"GO:0044673"}


id: SO:0001674
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved region about 24-bp upstream of the start point of bacterial transcription units, involved with sigma factor 54.","definition_xrefs":["PMID:18331472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"},{"relation_name":"part_of","term_name":"bacterial_RNApol_promoter_sigma54_element","termid":"SO:0001672"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minus_24_signal","synonyms":[{"name":"minus 24 signal","type":"related"}],"termid":"SO:0001674"}


id: GO:0017010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The linkage of the chromophore phycourobilin to phycoerythrins.","definition_xrefs":["RESID:AA0260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-bilin linkage","termid":"GO:0017007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-phycourobilin linkage","termid":"GO:0017010"}


id: PBO:0046655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"establishment of sister chromatid cohesion N-acetyltransferase 2","termid":"PBO:0046655"}


id: PBO:0062456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 129 pseudogene","termid":"PBO:0062456"}


id: PBO:0084063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein of the Ras superfamily; acts primarily on Sec4p, localizes to the bud site and bud tip; msb3 msb4 double mutation causes defects in secretion and actin organization; similar to the TBC-domain Tre2 oncogene; MSB4 has a paralog, MSB3, that arose from the whole genome duplication; human homolog USP6NL can complement yeast msb3 msb4 double null mutant","termid":"PBO:0084063"}


id: PBO:0068228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 535","termid":"PBO:0068228"}


id: PBO:0052269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 4C","termid":"PBO:0052269"}


id: PBO:0086663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified based on comparison to related yeast species; mCherry fusion protein localizes to the vacuole","termid":"PBO:0086663"}


id: GO:0000712
data:
  {"annotated_genes":["SJAG_02822","SJAG_03219","SJAG_03567","SJAG_02465","SJAG_00935","SJAG_01044","SJAG_02556","SJAG_00623","SJAG_02616"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97583,102240,104205,105139,106380,113184,113373,113524,114831],"is_not":false,"summary":null,"term":"GO:0000712"}]},"cv_name":"biological_process","definition":"The cleavage and rejoining of intermediates, such as Holliday junctions, formed during meiotic recombination to produce two intact molecules in which genetic material has been exchanged.","definition_xrefs":["PMID:11733053","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00623":null,"SJAG_00935":null,"SJAG_01044":null,"SJAG_02465":null,"SJAG_02556":null,"SJAG_02616":null,"SJAG_02822":null,"SJAG_03219":null,"SJAG_03567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007049","GO:0006259","GO:0140013","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"resolution of meiotic recombination intermediates","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"resolution of meiotic joint molecules as recombinants","type":"narrow"}],"termid":"GO:0000712","terms_by_termid":{"GO:0000712":null}}


id: PBO:0080060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 30","termid":"PBO:0080060"}


id: PBO:0070901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 9","termid":"PBO:0070901"}


id: PBO:0069741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1022, pseudogene","termid":"PBO:0069741"}


id: FYPO:0007950
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the observed mating efficiency, as determined by counting zygotes, asci, and sometimes spores, is higher than normal when a cell is subject to nitrogen stress.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased mating efficiency","termid":"FYPO:0001043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased mating efficency during nitrogen stress","termid":"FYPO:0007950"}


id: RO:0003304
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between an entity (e.g. a genotype, genetic variation, chemical, or environmental exposure) and a condition (a phenotype or disease), where the entity has some contributing role that influences the condition.","direct_ancestors":[{"relation_name":"is_a","term_name":"causes_or_contributes_to_condition","termid":"RO:0003302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contributes_to_condition","termid":"RO:0003304"}


id: PBO:0039693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acylaminoacyl-peptide hydrolase","termid":"PBO:0039693"}


id: GO:0140942
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl9-[histone H3] + 2 S-adenosyl-L-methionine = 2 H+ + N6,N6-dimethyl-L-lysyl9-[histone H3] + 2 S-adenosyl-L-homocysteine. This reaction is the successive addition of two methyl groups to the unmethylated lysine residue at position 9 of histone H3, producing histone H3K9me2.","definition_xrefs":["RHEA:64444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K9 methyltransferase activity","termid":"GO:0046974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0016741","GO:0008276","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"histone H3K9 dimethyltransferase activity","secondary_identifiers":["EC:2.1.1.368"],"synonyms":[{"name":"histone H3-K9 dimethylation","type":"broad"},{"name":"histone H3K9 dimethylase activity","type":"exact"},{"name":"histone H3K9 dimethylation","type":"broad"},{"name":"histone H3K9 mono/dimethylase activity","type":"exact"},{"name":"histone lysine N-dimethyltransferase activity (H3-K9 specific)","type":"exact"}],"termid":"GO:0140942"}


id: PBO:0063871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class C","termid":"PBO:0063871"}


id: PBO:0044871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 3","termid":"PBO:0044871"}


id: PBO:0044234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin 4A","termid":"PBO:0044234"}


id: GO:0051357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a 2-keto-5-iminopiperazine protein chromophore cross-link from the alpha-amino nitrogen of residue n, a methionine, to the alpha-carboxyl carbon of residue n+1, a tyrosine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+2. This cross-linking is coupled with a dehydrogenation of residue n+1 to form a double bond between the alpha and beta carbons.","definition_xrefs":["RESID:AA0377","PMID:10852900","PMID:15491166","PMID:11259412"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 3-(2-methylthio)ethyl-6-(4-hydroxybenzylidene)-5-iminopiperazin-2-one (obsolete GO:0051357)","synonyms":[{"name":"biosynthesis of protein-protein cross-link via L-methionyl-L-tyrosyl-2-keto-5-iminopiperazine","type":"exact"},{"name":"biosynthetic process of protein-protein cross-link via L-methionyl-L-tyrosyl-2-keto-5-iminopiperazine","type":"exact"}],"termid":"GO:0051357"}


id: GO:0106101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, a location in a peroxisome via the endoplasmic reticulum.","definition_xrefs":["GOC:pga","PMID:19479899","PMID:26408931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to peroxisome","termid":"GO:0072662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007031"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0007031"],"is_obsolete":false,"name":"ER-dependent peroxisome localization","termid":"GO:0106101"}


id: GO:0086029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from a Purkinje myocyte to a ventricular cardiac muscle cell.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling involved in cardiac conduction","termid":"GO:0086019"},{"relation_name":"is_a","term_name":"Purkinje myocyte to ventricular cardiac muscle cell communication","termid":"GO:0086068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Purkinje myocyte to ventricular cardiac muscle cell signaling","synonyms":[{"name":"Purkinje myocyte to ventricular cardiac muscle cell signalling","type":"exact"}],"termid":"GO:0086029"}


id: PBO:0005860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylglycinamide formyltransferase (predicted)","termid":"PBO:0005860"}


id: PR:O14067
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1687.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1687.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.08","synonyms":[{"name":"Spom972h-SPAC1687.08","type":"exact"}],"termid":"PR:O14067"}


id: PBO:0017409
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_improper_part","termid":"PBO:0017409"}


id: PBO:0061707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 pseudogene 2","termid":"PBO:0061707"}


id: FYECO:0000283
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which hemin was added to the medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ hemin","secondary_identifiers":["PMID:7565608"],"termid":"FYECO:0000283"}


id: PBO:0055288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2715","termid":"PBO:0055288"}


id: FYPO:0000809
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrion organization is abnormal. Mitochondrion organization results in the assembly, arrangement of constituent parts, or disassembly of a mitochondrion, and includes mitochondrial morphogenesis and distribution, and replication of the mitochondrial genome, as well as synthesis of new mitochondrial components.","definition_xrefs":["GO:0007005","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitochondrion organization","synonyms":[{"name":"abnormal mitochondrion organisation","type":"exact"},{"name":"abnormal mitochondrion organization during mitotic cell cycle","type":"related"},{"name":"abnormal mitochondrion organization during vegetative growth","type":"exact"}],"termid":"FYPO:0000809"}


id: PBO:0081555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 474","termid":"PBO:0081555"}


id: PBO:0036362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E4 involved in splicing Prp19","termid":"PBO:0036362"}


id: PBO:0043351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLPTM1 like","termid":"PBO:0043351"}


id: SO:0001549
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that changes alters the transcription of a transcript with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_function_variant","termid":"SO:0001538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription_variant","synonyms":[{"name":"transcription variant","type":"exact"}],"termid":"SO:0001549"}


id: PBO:0051969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involucrin","termid":"PBO:0051969"}


id: PBO:0002537
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of proteasome","termid":"PBO:0002537"}


id: GO:1903869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methylenetetrahydrofolate reductase (NAD(P)H) activity.","definition_xrefs":["GO_REF:0000059","GOC:BHF","GOC:TermGenie","GOC:rph","PMID:24769206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of oxidoreductase activity","termid":"GO:0051354"},{"relation_name":"is_a","term_name":"regulation of methylenetetrahydrofolate reductase (NAD(P)H) activity","termid":"GO:1903868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of methylenetetrahydrofolate reductase (NAD(P)H) activity","synonyms":[{"name":"down regulation of 5,10-CH(2)-H(4)folate reductase activity","type":"exact"},{"name":"down regulation of 5,10-CH2-H4folate reductase activity","type":"exact"},{"name":"down regulation of 5,10-methylenetetrahydrofolate reductase (FADH(2)) activity","type":"related"},{"name":"down regulation of 5,10-methylenetetrahydrofolate reductase (FADH) activity","type":"exact"},{"name":"down regulation of 5,10-methylenetetrahydrofolate reductase (FADH2) activity","type":"exact"},{"name":"down regulation of 5,10-methylenetetrahydrofolate reductase (NADPH) activity","type":"exact"},{"name":"down regulation of 5,10-methylenetetrahydropteroylglutamate reductase activity","type":"exact"},{"name":"down regulation of 5-methyltetrahydrofolate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"down regulation of 5-methyltetrahydrofolate:NAD oxidoreductase activity","type":"exact"},{"name":"down regulation of 5-methyltetrahydrofolate:NAD(+) oxidoreductase activity","type":"exact"},{"name":"down regulation of 5-methyltetrahydrofolate:NAD(P)+ oxidoreductase activity","type":"exact"},{"name":"down regulation of 5-methyltetrahydrofolate:NAD+ oxidoreductase activity","type":"exact"},{"name":"down regulation of 5-methyltetrahydrofolate:NADP(+) oxidoreductase activity","type":"exact"},{"name":"down regulation of 5-methyltetrahydrofolate:NADP+ oxidoreductase activity","type":"exact"},{"name":"down regulation of MetF","type":"related"},{"name":"down regulation of N5,10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"down regulation of N5,N10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"down regulation of methylenetetrahydrofolate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"exact"},{"name":"down regulation of methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase activity","type":"related"},{"name":"down regulation of methylenetetrahydrofolate reductase (NAD(P)H) activity","type":"exact"},{"name":"down regulation of methylenetetrahydrofolate reductase (NADPH(2)) activity","type":"exact"},{"name":"down regulation of methylenetetrahydrofolate reductase (NADPH2)","type":"exact"},{"name":"down regulation of methylenetetrahydrofolate reductase [NAD(P)H]","type":"related"},{"name":"down-regulation of 5,10-CH(2)-H(4)folate reductase activity","type":"exact"},{"name":"down-regulation of 5,10-CH2-H4folate reductase activity","type":"exact"},{"name":"down-regulation of 5,10-methylenetetrahydrofolate reductase (FADH(2)) activity","type":"related"},{"name":"down-regulation of 5,10-methylenetetrahydrofolate reductase (FADH) activity","type":"exact"},{"name":"down-regulation of 5,10-methylenetetrahydrofolate reductase (FADH2) activity","type":"exact"},{"name":"down-regulation of 5,10-methylenetetrahydrofolate reductase (NADPH) activity","type":"exact"},{"name":"down-regulation of 5,10-methylenetetrahydropteroylglutamate reductase activity","type":"exact"},{"name":"down-regulation of 5-methyltetrahydrofolate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"down-regulation of 5-methyltetrahydrofolate:NAD oxidoreductase activity","type":"exact"},{"name":"down-regulation of 5-methyltetrahydrofolate:NAD(+) oxidoreductase activity","type":"exact"},{"name":"down-regulation of 5-methyltetrahydrofolate:NAD(P)+ oxidoreductase activity","type":"exact"},{"name":"down-regulation of 5-methyltetrahydrofolate:NAD+ oxidoreductase activity","type":"exact"},{"name":"down-regulation of 5-methyltetrahydrofolate:NADP(+) oxidoreductase activity","type":"exact"},{"name":"down-regulation of 5-methyltetrahydrofolate:NADP+ oxidoreductase activity","type":"exact"},{"name":"down-regulation of MetF","type":"related"},{"name":"down-regulation of N5,10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"down-regulation of N5,N10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"down-regulation of methylenetetrahydrofolate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"exact"},{"name":"down-regulation of methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase activity","type":"related"},{"name":"down-regulation of methylenetetrahydrofolate reductase (NAD(P)H) activity","type":"exact"},{"name":"down-regulation of methylenetetrahydrofolate reductase (NADPH(2)) activity","type":"exact"},{"name":"down-regulation of methylenetetrahydrofolate reductase (NADPH2)","type":"exact"},{"name":"down-regulation of methylenetetrahydrofolate reductase [NAD(P)H]","type":"related"},{"name":"downregulation of 5,10-CH(2)-H(4)folate reductase activity","type":"exact"},{"name":"downregulation of 5,10-CH2-H4folate reductase activity","type":"exact"},{"name":"downregulation of 5,10-methylenetetrahydrofolate reductase (FADH(2)) activity","type":"related"},{"name":"downregulation of 5,10-methylenetetrahydrofolate reductase (FADH) activity","type":"exact"},{"name":"downregulation of 5,10-methylenetetrahydrofolate reductase (FADH2) activity","type":"exact"},{"name":"downregulation of 5,10-methylenetetrahydrofolate reductase (NADPH) activity","type":"exact"},{"name":"downregulation of 5,10-methylenetetrahydropteroylglutamate reductase activity","type":"exact"},{"name":"downregulation of 5-methyltetrahydrofolate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"downregulation of 5-methyltetrahydrofolate:NAD oxidoreductase activity","type":"exact"},{"name":"downregulation of 5-methyltetrahydrofolate:NAD(+) oxidoreductase activity","type":"exact"},{"name":"downregulation of 5-methyltetrahydrofolate:NAD(P)+ oxidoreductase activity","type":"exact"},{"name":"downregulation of 5-methyltetrahydrofolate:NAD+ oxidoreductase activity","type":"exact"},{"name":"downregulation of 5-methyltetrahydrofolate:NADP(+) oxidoreductase activity","type":"exact"},{"name":"downregulation of 5-methyltetrahydrofolate:NADP+ oxidoreductase activity","type":"exact"},{"name":"downregulation of MetF","type":"related"},{"name":"downregulation of N5,10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"downregulation of N5,N10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"downregulation of methylenetetrahydrofolate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"exact"},{"name":"downregulation of methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase activity","type":"related"},{"name":"downregulation of methylenetetrahydrofolate reductase (NAD(P)H) activity","type":"exact"},{"name":"downregulation of methylenetetrahydrofolate reductase (NADPH(2)) activity","type":"exact"},{"name":"downregulation of methylenetetrahydrofolate reductase (NADPH2)","type":"exact"},{"name":"downregulation of methylenetetrahydrofolate reductase [NAD(P)H]","type":"related"},{"name":"inhibition of 5,10-CH(2)-H(4)folate reductase activity","type":"narrow"},{"name":"inhibition of 5,10-CH2-H4folate reductase activity","type":"narrow"},{"name":"inhibition of 5,10-methylenetetrahydrofolate reductase (FADH(2)) activity","type":"related"},{"name":"inhibition of 5,10-methylenetetrahydrofolate reductase (FADH) activity","type":"narrow"},{"name":"inhibition of 5,10-methylenetetrahydrofolate reductase (FADH2) activity","type":"narrow"},{"name":"inhibition of 5,10-methylenetetrahydrofolate reductase (NADPH) activity","type":"narrow"},{"name":"inhibition of 5,10-methylenetetrahydropteroylglutamate reductase activity","type":"narrow"},{"name":"inhibition of 5-methyltetrahydrofolate:(acceptor) oxidoreductase activity","type":"narrow"},{"name":"inhibition of 5-methyltetrahydrofolate:NAD oxidoreductase activity","type":"narrow"},{"name":"inhibition of 5-methyltetrahydrofolate:NAD(+) oxidoreductase activity","type":"narrow"},{"name":"inhibition of 5-methyltetrahydrofolate:NAD(P)+ oxidoreductase activity","type":"narrow"},{"name":"inhibition of 5-methyltetrahydrofolate:NAD+ oxidoreductase activity","type":"narrow"},{"name":"inhibition of 5-methyltetrahydrofolate:NADP(+) oxidoreductase activity","type":"narrow"},{"name":"inhibition of 5-methyltetrahydrofolate:NADP+ oxidoreductase activity","type":"narrow"},{"name":"inhibition of MetF","type":"related"},{"name":"inhibition of N5,10-methylenetetrahydrofolate reductase activity","type":"narrow"},{"name":"inhibition of N5,N10-methylenetetrahydrofolate reductase activity","type":"narrow"},{"name":"inhibition of methylenetetrahydrofolate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"narrow"},{"name":"inhibition of methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase activity","type":"related"},{"name":"inhibition of methylenetetrahydrofolate reductase (NAD(P)H) activity","type":"narrow"},{"name":"inhibition of methylenetetrahydrofolate reductase (NADPH(2)) activity","type":"narrow"},{"name":"inhibition of methylenetetrahydrofolate reductase (NADPH2)","type":"narrow"},{"name":"inhibition of methylenetetrahydrofolate reductase [NAD(P)H]","type":"related"},{"name":"negative regulation of 5,10-CH(2)-H(4)folate reductase activity","type":"exact"},{"name":"negative regulation of 5,10-CH2-H4folate reductase activity","type":"exact"},{"name":"negative regulation of 5,10-methylenetetrahydrofolate reductase (FADH(2)) activity","type":"related"},{"name":"negative regulation of 5,10-methylenetetrahydrofolate reductase (FADH) activity","type":"exact"},{"name":"negative regulation of 5,10-methylenetetrahydrofolate reductase (FADH2) activity","type":"exact"},{"name":"negative regulation of 5,10-methylenetetrahydrofolate reductase (NADPH) activity","type":"exact"},{"name":"negative regulation of 5,10-methylenetetrahydropteroylglutamate reductase activity","type":"exact"},{"name":"negative regulation of 5-methyltetrahydrofolate:(acceptor) oxidoreductase activity","type":"exact"},{"name":"negative regulation of 5-methyltetrahydrofolate:NAD oxidoreductase activity","type":"exact"},{"name":"negative regulation of 5-methyltetrahydrofolate:NAD(+) oxidoreductase activity","type":"exact"},{"name":"negative regulation of 5-methyltetrahydrofolate:NAD(P)+ oxidoreductase activity","type":"exact"},{"name":"negative regulation of 5-methyltetrahydrofolate:NAD+ oxidoreductase activity","type":"exact"},{"name":"negative regulation of 5-methyltetrahydrofolate:NADP(+) oxidoreductase activity","type":"exact"},{"name":"negative regulation of 5-methyltetrahydrofolate:NADP+ oxidoreductase activity","type":"exact"},{"name":"negative regulation of MetF","type":"related"},{"name":"negative regulation of N5,10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"negative regulation of N5,N10-methylenetetrahydrofolate reductase activity","type":"exact"},{"name":"negative regulation of methylenetetrahydrofolate (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"exact"},{"name":"negative regulation of methylenetetrahydrofolate (reduced riboflavin adenine dinucleotide) reductase activity","type":"related"},{"name":"negative regulation of methylenetetrahydrofolate reductase (NADPH(2)) activity","type":"exact"},{"name":"negative regulation of methylenetetrahydrofolate reductase (NADPH2)","type":"exact"},{"name":"negative regulation of methylenetetrahydrofolate reductase [NAD(P)H]","type":"related"}],"termid":"GO:1903869"}


id: GO:0010512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of phosphatidylinositol.","definition_xrefs":["GOC:dph","GOC:tb","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylinositol biosynthetic process","termid":"GO:0010511"},{"relation_name":"is_a","term_name":"negative regulation of cellular biosynthetic process","termid":"GO:0031327"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid biosynthetic process","termid":"GO:0071072"},{"relation_name":"negatively_regulates","term_name":"phosphatidylinositol biosynthetic process","termid":"GO:0006661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of phosphatidylinositol biosynthetic process","termid":"GO:0010512"}


id: PBO:0066558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 21","termid":"PBO:0066558"}


id: PBO:0078514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 7","termid":"PBO:0078514"}


id: GO:0035766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell in response to the presence of fibroblast growth factor (FGF).","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"},{"relation_name":"part_of","term_name":"cellular response to fibroblast growth factor stimulus","termid":"GO:0044344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell chemotaxis to fibroblast growth factor","termid":"GO:0035766"}


id: PATO:0001734
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a plant by virtue of the bearer's disposition to being between evergeen and deciduous.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shedability","termid":"PATO:0001729"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semi-deciduous(plant)","termid":"PATO:0001734"}


id: GO:0036008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sucrose, which proceeds by phosphorylation of sucrose to form sucrose-6-phosphate. The subsequent actions of a hydrolase and a fructokinase generate fructose-6-phosphate and glucose-6-phosphate.","definition_xrefs":["MetaCyc:SUCUTIL-PWY","GOC:dgf","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sucrose catabolic process","termid":"GO:0005987"},{"relation_name":"is_a","term_name":"fructose 6-phosphate metabolic process","termid":"GO:0006002"},{"relation_name":"is_a","term_name":"glucose 6-phosphate metabolic process","termid":"GO:0051156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"sucrose catabolic process to fructose-6-phosphate and glucose-6-phosphate","termid":"GO:0036008"}


id: PBO:0082096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphogluconolactonase; protein abundance increases in response to DNA replication stress; SOL4 has a paralog, SOL3, that arose from the whole genome duplication","termid":"PBO:0082096"}


id: PBO:0071745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L41 pseudogene 1","termid":"PBO:0071745"}


id: PBO:0064213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase B domain containing 2","termid":"PBO:0064213"}


id: PBO:0045402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 4","termid":"PBO:0045402"}


id: GO:0072565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular component organization process in which microparticles bud off from an endothelial cell.","definition_xrefs":["PMID:16373184","GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood microparticle formation","termid":"GO:0072564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial microparticle formation","synonyms":[{"name":"endothelial microparticle generation","type":"exact"},{"name":"endothelial microparticle release","type":"exact"}],"termid":"GO:0072565"}


id: GO:0045149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving acetoin, 3-hydroxy-2-butanone, often as part of a fermentation pathway or for use as a carbon source.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"secondary alcohol metabolic process","termid":"GO:1902652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"acetoin metabolic process","synonyms":[{"name":"acetoin metabolism","type":"exact"}],"termid":"GO:0045149"}


id: PBO:0077910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 1","termid":"PBO:0077910"}


id: SO:0000120
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript that, at least in part, encodes one or more proteins.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript","termid":"SO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein_coding_primary_transcript","synonyms":[{"name":"pre mRNA","type":"related"},{"name":"protein coding primary transcript","type":"exact"}],"termid":"SO:0000120"}


id: FYPO:0006422
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more histone RNAs measured in a cell is higher than normal (i.e. lower than observed in wild-type cells) during S phase of the mitotic cell cycle. Histone RNAs are transcribed from genes encoding histones.","definition_xrefs":["PMID:27901072","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of histone gene mRNA during vegetative growth","termid":"FYPO:0006413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"increased level of histone gene mRNA during mitotic S phase","synonyms":[{"name":"increased histone gene mRNA accumulation during mitotic S phase","type":"related"},{"name":"increased level of histone gene RNA during mitotic S phase","type":"exact"},{"name":"increased level of histone gene mRNA during S phase of mitotic cell cycle","type":"exact"},{"name":"increased level of histone gene transcripts during mitotic S phase","type":"exact"}],"termid":"FYPO:0006422"}


id: PBO:0078606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 19","termid":"PBO:0078606"}


id: PR:O94477
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- myo52 gene.","definition_xrefs":["UniProtKB:O94477","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin-52 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.10c","synonyms":[{"name":"Spom972h-myo52","type":"exact"},{"name":"myosin type V-2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94477"}


id: MOD:00816
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-stearoyl-L-cysteine.","definition_xrefs":["PubMed:2371783","PubMed:3143715","RESID:AA0407","DeltaMass:0","PubMed:8761467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acylated L-cysteine","termid":"MOD:02005"},{"relation_name":"is_a","term_name":"S-stearoylated residue","termid":"MOD:02006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"S-stearoyl-L-cysteine","synonyms":[{"name":"(R)-2-amino-3-(octadecanoylsulfanyl)propanoic acid","type":"exact"},{"name":"2-amino-3-(octadecanoylthio)propanoic acid","type":"exact"},{"name":"LIPID S-stearoyl cysteine","type":"exact"},{"name":"S-stearoyl-L-cysteine","type":"exact"},{"name":"SSteCys","type":"exact"},{"name":"Stearoylation","type":"exact"},{"name":"cysteine octadecanoate thioester","type":"exact"},{"name":"cysteine stearate thioester","type":"exact"}],"termid":"MOD:00816"}


id: PBO:0044770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DExD-box helicase 52","termid":"PBO:0044770"}


id: PBO:0052564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase 2C pseudogene 1","termid":"PBO:0052564"}


id: GO:1902315
data:
  {"annotated_genes":["SJAG_02627","SJAG_00874","SJAG_01762","SJAG_01823","SJAG_03451","SJAG_02172","SJAG_00311","SJAG_02800","SJAG_03720","SJAG_03438","SJAG_04341","SJAG_03048","SJAG_02098","SJAG_04879","SJAG_01354","SJAG_04623","SJAG_01210","SJAG_03927","SJAG_04671","SJAG_00696","SJAG_04995","SJAG_02394","SJAG_02667","SJAG_02348","SJAG_04994","SJAG_00327","SJAG_02074","SJAG_01624","SJAG_02162","SJAG_00857","SJAG_03695","SJAG_02908","SJAG_00364","SJAG_05301","SJAG_00536","SJAG_03160","SJAG_00884","SJAG_00399","SJAG_02607","SJAG_04210","SJAG_01267","SJAG_05239"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93495,99021],"is_not":false,"summary":null,"term":"GO:1902315"},{"annotations":[111475,103400,109630,105994],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140529"},{"annotations":[99383],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140530"},{"annotations":[109244,99020,103301,103403,88007,93392,111176,106276,104104,102472,89036,111348,95475,109633,95482,111479,90001,86498,93494,90609,103891,107447,109549,108499,107705,107965,109223,101377,113413,108095,106616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902975"},{"annotations":[85427,93833,104944,98432],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903467"},{"annotations":[99386,108098,113352],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903468"},{"annotations":[98438,112311,102664,85123],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1904514"},{"annotations":[95419],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903466"}]},"cv_name":"biological_process","definition":"Any DNA replication initiation that is involved in nuclear cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle DNA replication initiation","termid":"GO:1902292"},{"relation_name":"part_of","term_name":"nuclear DNA replication","termid":"GO:0033260"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00311":null,"SJAG_00327":null,"SJAG_00364":null,"SJAG_00399":null,"SJAG_00536":null,"SJAG_00696":null,"SJAG_00857":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_01210":null,"SJAG_01267":null,"SJAG_01354":null,"SJAG_01624":null,"SJAG_01762":null,"SJAG_01823":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02162":null,"SJAG_02172":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02607":null,"SJAG_02627":null,"SJAG_02667":null,"SJAG_02800":null,"SJAG_02908":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03438":null,"SJAG_03451":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_03927":null,"SJAG_04210":null,"SJAG_04341":null,"SJAG_04623":null,"SJAG_04671":null,"SJAG_04879":null,"SJAG_04994":null,"SJAG_04995":null,"SJAG_05239":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"nuclear cell cycle DNA replication initiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA endoreduplication initiation involved in nuclear cell cycle DNA replication","type":"narrow"},{"name":"DNA re-replication initiation involved in nuclear cell cycle DNA replication","type":"narrow"},{"name":"DNA replication initiation involved in nuclear cell cycle DNA replication","type":"exact"}],"termid":"GO:1902315","terms_by_termid":{"GO:0140529":null,"GO:0140530":null,"GO:1902315":null,"GO:1902975":null,"GO:1903466":null,"GO:1903467":null,"GO:1903468":null,"GO:1904514":null}}


id: FYPO:0002748
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-alanine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular alanine level","synonyms":[{"name":"decreased cellular L-alanine level","type":"exact"},{"name":"decreased cellular alanine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular alanine level during vegetative growth","type":"exact"},{"name":"decreased level of alanine in cell","type":"exact"},{"name":"reduced cellular alanine level","type":"exact"},{"name":"reduced level of alanine in cell","type":"exact"}],"termid":"FYPO:0002748"}


id: MOD:01207
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N4 hydrogen atom of an asparagine residue with a carbohydrate-like group composed of Hex1HexNAc1NeuAc2 linked through a glycosidic bond.","definition_xrefs":["Unimod:160#N"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"Hex1HexNAc1NeuAc2 glycosylated residue","termid":"MOD:00528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"Hex1HexNAc1NeuAc2 N4-glycosylated asparagine","synonyms":[{"name":"Hex(1)HexNAc(1)NeuAc(2)","type":"related"},{"name":"Hex1HexNAc1NeuAc2","type":"related"}],"termid":"MOD:01207"}


id: GO:0043726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-amino-6-(5-phospho-D-ribitylamino)uracil + H2O = 5-amino-6-(D-ribitylamino)uracil + phosphate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"5-amino-6-(5-phosphoribitylamino)uracil phosphatase activity","secondary_identifiers":["MetaCyc:RIBOPHOSPHAT-RXN","RHEA:25197","GO:0019173","EC:3.1.3.104"],"synonyms":[{"name":"pyrimidine phosphatase activity","type":"exact"}],"termid":"GO:0043726"}


id: PBO:0001975
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ataxia-ocular apraxia 2","termid":"PBO:0001975"}


id: PBO:0003418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription related zf-ZZ type zinc finger protein","termid":"PBO:0003418"}


id: PBO:0085572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein integral to the mitochondrial membrane; has a conserved methyltransferase motif and is predicted to be an RNA methyltransferase; multicopy suppressor of respiratory defects caused by OXA1 mutations","termid":"PBO:0085572"}


id: GO:0099052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The membrane scission process that is the final step in the formation of a clathrin-coated endocytic vesicle: separation from the plasma membrane.","definition_xrefs":["PMID:21779028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle scission involved in endocytosis","termid":"GO:0099051"},{"relation_name":"part_of","term_name":"clathrin-dependent endocytosis","termid":"GO:0072583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"vesicle scission involved in clathrin-mediated endocytosis","termid":"GO:0099052"}


id: GO:0048883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a cluster of a relatively undifferentiated cell originating at specific cephalic placodes and depositing proneuromasts along a developing lateral line, from which the neuromasts will develop.","definition_xrefs":["PMID:15832385","PMID:15018940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"lateral line development","termid":"GO:0048882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast primordium migration","synonyms":[{"name":"lateral line primordium migration","type":"exact"}],"termid":"GO:0048883"}


id: GO:1903541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of exosomal secretion.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:24105262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of exocytosis","termid":"GO:0017157"},{"relation_name":"regulates","term_name":"exosomal secretion","termid":"GO:1990182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"regulation of exosomal secretion","synonyms":[{"name":"regulation of exosomal protein secretion","type":"narrow"},{"name":"regulation of exosomal secretory pathway","type":"exact"},{"name":"regulation of extracellular vesicular exosome secretion","type":"exact"},{"name":"regulation of secretion of exosome","type":"exact"}],"termid":"GO:1903541"}


id: PBO:0045412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental pluripotency associated 4 pseudogene 1","termid":"PBO:0045412"}


id: PBO:0066530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RANBP2 like and GRIP domain containing 5","termid":"PBO:0066530"}


id: GO:0005252
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by an open rectifier voltage-gated channel. An open rectifier current-voltage relationship is one in which the direction of rectification depends on the external potassium ion concentration.","definition_xrefs":["GOC:mah","PMID:8917578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity","termid":"GO:0005249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"open rectifier potassium channel activity","termid":"GO:0005252"}


id: PBO:0074307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD family member 1","termid":"PBO:0074307"}


id: GO:0097076
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses protein kinase activity and activates the I-kappa B kinase complex (IKK) and mitogen-activated protein (MAP) kinases in response to TRAF6 signaling. It comprises the catalytic subunit TAK1 complexed to the regulatory subunits, termed TABs (TAK1-binding subunits).","definition_xrefs":["PMID:16410796","PMID:17496917","GOC:cna","PMID:18021073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase complex","termid":"GO:1902911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transforming growth factor beta activated kinase 1 complex","synonyms":[{"name":"TAK1 kinase complex","type":"exact"}],"termid":"GO:0097076"}


id: PBO:0073493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate phosphatase 2","termid":"PBO:0073493"}


id: PR:O14278
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug129 gene.","definition_xrefs":["UniProtKB:O14278","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 129 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8C9.09c","synonyms":[{"name":"Spom972h-mug129","type":"exact"}],"termid":"PR:O14278"}


id: PBO:0063585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PET117 cytochrome c oxidase chaperone","termid":"PBO:0063585"}


id: FYPO:0003895
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of rotenone than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"resistance to rotenone","synonyms":[{"name":"resistance to rotenone during mitotic cell cycle","type":"related"},{"name":"resistance to rotenone during vegetative growth","type":"exact"},{"name":"resistant to rotenone","type":"exact"}],"termid":"FYPO:0003895"}


id: PBO:0030589
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_vacuolar_arginine_level","termid":"PBO:0030589"}


id: PBO:0045519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"denticleless E3 ubiquitin protein ligase homolog","termid":"PBO:0045519"}


id: GO:0106172
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a COPI-coated endocytic vesicle.","definition_xrefs":["GOC:pde","PMID:29535154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"COPI-coated vesicle","termid":"GO:0030137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"COPI-coated vesicle lumen","termid":"GO:0106172"}


id: PBO:0054741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2150","termid":"PBO:0054741"}


id: GO:0042718
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Discrete structures that partition the water-insoluble portion of the yolk of oocytes and ova, which may or may not be membrane enclosed.","definition_xrefs":["PMID:6337890","GOC:jl","PMID:18046696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"yolk","termid":"GO:0060417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"yolk granule","termid":"GO:0042718"}


id: GO:0090563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + sugar(out) = protein cysteine + sugar phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"active transmembrane transporter activity","termid":"GO:0022804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0003824","GO:0022857","GO:0016740"],"is_obsolete":false,"name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}


id: PBO:0078685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon AAG) 1-1","termid":"PBO:0078685"}


id: PBO:0040018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 7","termid":"PBO:0040018"}


id: PBO:0034519
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-curved_elongated_vegetative_cell_with_long_curved_cytoplasmic_microtubules","termid":"PBO:0034519"}


id: PBO:0001440
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Sty1","termid":"PBO:0001440"}


id: PBO:0014575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor","termid":"PBO:0014575"}


id: GO:0046287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving isoflavonoids, a group of water-soluble phenolic derivatives, isomeric with flavonoids, containing a flavan skeleton. They are differentiated from flavonoids by the point of attachment of the aromatic ring group.","definition_xrefs":["GOC:ai","PMID:15734910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"isoflavonoid metabolic process","synonyms":[{"name":"isoflavonoid metabolism","type":"exact"}],"termid":"GO:0046287"}


id: PBO:0062762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily P member 2 pseudogene","termid":"PBO:0062762"}


id: GO:0140648
data:
  {"annotated_genes":["SJAG_03486","SJAG_03501"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112564,114295],"is_not":false,"summary":null,"term":"GO:0140648"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic to meiotic cell cycle switching, the process in which a cell switches cell cycle mode from mitotic to meiotic division.","definition_xrefs":["PMID:22375066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of meiotic cell cycle","termid":"GO:0051446"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of cell cycle switching, mitotic to meiotic cell cycle","termid":"GO:0110044"},{"relation_name":"positively_regulates","term_name":"cell cycle switching, mitotic to meiotic cell cycle","termid":"GO:0051728"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03486":null,"SJAG_03501":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of cell cycle switching, mitotic to meiotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140648","terms_by_termid":{"GO:0140648":null}}


id: GO:0001092
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a general RNA polymerase II transcription factor belonging to the TFIIA complex, one of the complexes involved in formation of the preinitiation complex (PIC) by RNA polymerase II and defined as a basal or general transcription factor.","definition_xrefs":["PMID:16858867","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II general transcription initiation factor binding","termid":"GO:0001091"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"TFIIA-class transcription factor complex binding","synonyms":[{"name":"TFIIA-class transcription factor binding","type":"exact"}],"termid":"GO:0001092"}


id: PBO:0085786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unconfirmed function; involved in pyridoxine metabolism; expression is induced during stationary phase; forms a putative glutamine amidotransferase complex with Snz1p, with Sno1p serving as the glutaminase","termid":"PBO:0085786"}


id: PBO:0001861
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.17.4","termid":"PBO:0001861"}


id: PR:O60076
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription initiation factor TFIID subunit 13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO05026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1494.02c","secondary_identifiers":["UniProtKB:O60076"],"synonyms":[{"name":"Spom972h-TAF13","type":"exact"},{"name":"TBP-associated factor 13 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60076"}


id: PBO:0041207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper and W2 domains 1","termid":"PBO:0041207"}


id: PBO:0080868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YJU2 splicing factor homolog","termid":"PBO:0080868"}


id: GO:0019631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of quinate, the anion of quinic acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quinate metabolic process","termid":"GO:0019630"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0044248","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"quinate catabolic process","secondary_identifiers":["MetaCyc:QUINATEDEG-PWY"],"synonyms":[{"name":"quinate breakdown","type":"exact"},{"name":"quinate catabolism","type":"exact"},{"name":"quinate degradation","type":"exact"},{"name":"quinic acid catabolic process","type":"exact"},{"name":"quinic acid catabolism","type":"exact"}],"termid":"GO:0019631"}


id: PBO:0052343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIF1C antisense RNA 1","termid":"PBO:0052343"}


id: GO:0052809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of a carbon-oxygen bond in acharan sulfate, a glycosaminoglycan with a uniformly repeating disaccharide structure of alpha-D-N-acetylglucosaminyl-2-O-sulfo-alpha-L-iduronic acid.","definition_xrefs":["GOC:mengo_curators","PMID:19566715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"acharan sulfate lyase activity","termid":"GO:0052809"}


id: GO:0018303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 4Fe-4S iron-sulfur cluster via tris-L-cysteinyl-L-N3'-histidino tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0285"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via tris-L-cysteinyl-L-N3'-histidino tetrairon tetrasulfide (obsolete GO:0018303)","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl-L-N3'-histidino tetrairon tetrasulphide","type":"exact"}],"termid":"GO:0018303"}


id: GO:0070434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of the nucleotide-binding oligomerization domain containing 2 (NOD2) pathway.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0070426"},{"relation_name":"is_a","term_name":"regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway","termid":"GO:0070432"},{"relation_name":"positively_regulates","term_name":"nucleotide-binding oligomerization domain containing 2 signaling pathway","termid":"GO:0070431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway","synonyms":[{"name":"positive regulation of NOD2 signaling pathway","type":"exact"},{"name":"positive regulation of nucleotide-binding oligomerization domain containing 2 signalling pathway","type":"exact"}],"termid":"GO:0070434"}


id: MOD:01747
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Proteome Sciences TMT6plex-129 reporter+balance group.","definition_xrefs":["Unimod:737#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent O-acylated residue","termid":"MOD:01719"},{"relation_name":"is_a","term_name":"TMT6plex-129 reporter+balance reagent acylated residue","termid":"MOD:01744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"TMT6plex-129 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01747"}


id: GO:1901531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to hypochlorite.","definition_xrefs":["GOC:TermGenie","GOC:pr","PMID:22223481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"hypochlorite binding","termid":"GO:1901531"}


id: PBO:0034466
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_mitochondrial_transport_gene_mRNA_during_vegetative_growth","termid":"PBO:0034466"}


id: GO:0061136
data:
  {"annotated_genes":["SJAG_00071","SJAG_01528","SJAG_00052","SJAG_00766","SJAG_00712","SJAG_01489","SJAG_04477","SJAG_02723","SJAG_01210","SJAG_00475","SJAG_00642","SJAG_02244","SJAG_03699","SJAG_01131","SJAG_02485","SJAG_03048","SJAG_01544"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76425],"is_not":false,"summary":null,"term":"GO:0061136"},{"annotations":[98424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[95926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904293"},{"annotations":[103000,86461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032435"},{"annotations":[85009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[66486,67755,65012,66222,60790,67422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901800"},{"annotations":[102703,107775,104945,98446,113149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"},{"annotations":[110695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032434"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds that is mediated by the proteasome.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein catabolic process","termid":"GO:0042176"},{"relation_name":"is_a","term_name":"regulation of proteolysis involved in protein catabolic process","termid":"GO:1903050"},{"relation_name":"regulates","term_name":"proteasomal protein catabolic process","termid":"GO:0010498"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00052":null,"SJAG_00071":null,"SJAG_00475":null,"SJAG_00642":null,"SJAG_00712":null,"SJAG_00766":null,"SJAG_01131":null,"SJAG_01210":null,"SJAG_01489":null,"SJAG_01528":null,"SJAG_01544":null,"SJAG_02244":null,"SJAG_02485":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03699":null,"SJAG_04477":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"regulation of proteasomal protein catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0061136","terms_by_termid":{"GO:0032434":null,"GO:0032435":null,"GO:0032436":null,"GO:0061136":null,"GO:1901800":null,"GO:1904293":null,"GO:1905785":null,"GO:1905786":null}}


id: PBO:0055108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2526","termid":"PBO:0055108"}


id: PBO:0089914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2B-K119 ubiquitin ligase complex (HULC) subunit, ubiquitin-protein ligase E3 Brl1","termid":"PBO:0089914"}


id: PBO:0086416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GTPase; associates with free 60S ribosomal subunits in the nucleolus and is required for 60S ribosomal subunit biogenesis; constituent of 66S pre-ribosomal particles; member of the ODN family of nucleolar G-proteins","termid":"PBO:0086416"}


id: PBO:0071249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 90","termid":"PBO:0071249"}


id: PBO:0070783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 13","termid":"PBO:0070783"}


id: _global:homologous_to
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"similar_to","termid":"_global:similar_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homologous_to","termid":"_global:homologous_to"}


id: PBO:0069738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1019, pseudogene","termid":"PBO:0069738"}


id: PBO:0042212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin K","termid":"PBO:0042212"}


id: PBO:0003443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial peptidase (predicted)","termid":"PBO:0003443"}


id: GO:0016409
data:
  {"annotated_genes":["SJAG_02305","SJAG_04178","SJAG_04451","SJAG_01112","SJAG_01299","SJAG_00895"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91960,104335,99176,106204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019706"},{"annotations":[101590,88833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004758"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a palmitoyl (CH3-[CH2]14-CO-) group to an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00895":null,"SJAG_01112":null,"SJAG_01299":null,"SJAG_02305":null,"SJAG_04178":null,"SJAG_04451":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"palmitoyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5686304","Reactome:R-HSA-203567"],"termid":"GO:0016409","terms_by_termid":{"GO:0004758":null,"GO:0019706":null}}


id: PBO:0003200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocysteine synthase Met17","termid":"PBO:0003200"}


id: GO:0120340
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The short portion of the radial spoke 1 (RS1) that is directly anchored to the A microtubule of an axonemal microtubule doublet.","definition_xrefs":["GOC:krc","PMID:25694453","PMID:22754630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radial spoke base","termid":"GO:0120339"},{"relation_name":"part_of","term_name":"radial spoke 1","termid":"GO:0120333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"radial spoke base 1","termid":"GO:0120340"}


id: GO:0030086
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete PSII associated light-harvesting complex II, core complex, LHCIIa subcomplex (obsolete GO:0030086)","synonyms":[{"name":"PSII associated light-harvesting complex II, core complex, LHCIIa subcomplex","type":"exact"}],"termid":"GO:0030086"}


id: PBO:0002543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial endodeoxyribonuclease Pnu1","termid":"PBO:0002543"}


id: PBO:0061974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AM member 1 pseudogene","termid":"PBO:0061974"}


id: PBO:0044956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 3","termid":"PBO:0044956"}


id: PBO:0039494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A17, pseudogene","termid":"PBO:0039494"}


id: FYPO:0000468
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mating type switching is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process phenotype","termid":"FYPO:0000679"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000293","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mating type switching","synonyms":[{"name":"abnormal mating type switching during mitotic cell cycle","type":"related"},{"name":"abnormal mating type switching during vegetative growth","type":"exact"},{"name":"mating type switching: abnormal","type":"related"}],"termid":"FYPO:0000468"}


id: GO:0048303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of isotype switching to IgG isotypes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of isotype switching","termid":"GO:0045829"},{"relation_name":"is_a","term_name":"regulation of isotype switching to IgG isotypes","termid":"GO:0048302"},{"relation_name":"negatively_regulates","term_name":"isotype switching to IgG isotypes","termid":"GO:0048291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of isotype switching to IgG isotypes","synonyms":[{"name":"down regulation of isotype switching to IgG isotypes","type":"exact"},{"name":"down-regulation of isotype switching to IgG isotypes","type":"exact"},{"name":"downregulation of isotype switching to IgG isotypes","type":"exact"},{"name":"inhibition of isotype switching to IgG isotypes","type":"narrow"},{"name":"negative regulation of class switch recombination to IgG isotypes","type":"exact"},{"name":"negative regulation of class switching to IgG isotypes","type":"exact"},{"name":"negative regulation of isotype switch recombination to IgG isotypes","type":"exact"}],"termid":"GO:0048303"}


id: GO:0016705
data:
  {"annotated_genes":["SJAG_01465","SJAG_03249","SJAG_00892","SJAG_00717","SJAG_00221","SJAG_04580","SJAG_02285","SJAG_03509","SJAG_03041","SJAG_05265","SJAG_03750","SJAG_01057","SJAG_04608","SJAG_00370","SJAG_03286","SJAG_03635","SJAG_00459","SJAG_03664","SJAG_00642","SJAG_03997","SJAG_02401","SJAG_03943","SJAG_05311","SJAG_04913","SJAG_04000","SJAG_03018"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90747,97281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016706"},{"annotations":[105331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008682"},{"annotations":[99303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106364"},{"annotations":[87541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000249"},{"annotations":[94909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000254"},{"annotations":[85725,103584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000248"},{"annotations":[103585,85726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050046"},{"annotations":[92140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019135"},{"annotations":[87855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080132"},{"annotations":[108294,83466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051864"},{"annotations":[113828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140680"},{"annotations":[83468,92718,109129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034647"},{"annotations":[90144,99294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140683"},{"annotations":[109081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004499"},{"annotations":[99305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016712"},{"annotations":[90862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106156"},{"annotations":[107779,107780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031543"},{"annotations":[108601,105768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042284"},{"annotations":[107872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004506"},{"annotations":[110472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004768"},{"annotations":[84544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008398"},{"annotations":[99163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990984"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor.","definition_xrefs":["EC:1.14.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00370":null,"SJAG_00459":null,"SJAG_00642":null,"SJAG_00717":null,"SJAG_00892":null,"SJAG_01057":null,"SJAG_01465":null,"SJAG_02285":null,"SJAG_02401":null,"SJAG_03018":null,"SJAG_03041":null,"SJAG_03249":null,"SJAG_03286":null,"SJAG_03509":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03750":null,"SJAG_03943":null,"SJAG_03997":null,"SJAG_04000":null,"SJAG_04580":null,"SJAG_04608":null,"SJAG_04913":null,"SJAG_05265":null,"SJAG_05311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, miscellaneous","type":"narrow"}],"termid":"GO:0016705","terms_by_termid":{"GO:0000248":null,"GO:0000249":null,"GO:0000254":null,"GO:0004499":null,"GO:0004506":null,"GO:0004768":null,"GO:0008398":null,"GO:0008682":null,"GO:0016706":null,"GO:0016712":null,"GO:0019135":null,"GO:0031543":null,"GO:0034647":null,"GO:0042284":null,"GO:0050046":null,"GO:0051864":null,"GO:0080132":null,"GO:0106156":null,"GO:0106364":null,"GO:0140680":null,"GO:0140683":null,"GO:1990984":null}}


id: PBO:0050943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 14","termid":"PBO:0050943"}


id: GO:0050170
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-N-peptidyl-L-glutamine + H2O = alpha-N-peptidyl-L-glutamate + NH3.","definition_xrefs":["EC:3.5.1.43","MetaCyc:PEPTIDYL-GLUTAMINASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"peptidyl-glutaminase activity","secondary_identifiers":["RHEA:10032"],"synonyms":[{"name":"peptideglutaminase activity","type":"related"},{"name":"peptidoglutaminase I activity","type":"narrow"},{"name":"peptidoglutaminase activity","type":"related"},{"name":"peptidyl-L-glutamine amidohydrolase activity","type":"related"}],"termid":"GO:0050170"}


id: GO:0001537
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + N-acetyl-D-galactosamine = adenosine 3',5'-bisphosphate + N-acetyl-D-galactosamine 4-sulfate.","definition_xrefs":["EC:2.8.2.-","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016782"],"is_obsolete":false,"name":"N-acetylgalactosamine 4-O-sulfotransferase activity","secondary_identifiers":["Reactome:R-HSA-2022063","Reactome:R-HSA-3636919","Reactome:R-HSA-6786034"],"synonyms":[{"name":"N-acetylgalactosamine 4-O-sulphotransferase activity","type":"exact"}],"termid":"GO:0001537"}


id: PBO:0063631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1 pseudogene 9","termid":"PBO:0063631"}


id: GO:1902754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of renal amino acid absorption.","definition_xrefs":["GO_REF:0000058","PMID:1526373","GOC:hjd","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of renal amino acid absorption","termid":"GO:1902752"},{"relation_name":"positively_regulates","term_name":"renal amino acid absorption","termid":"GO:1990297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of renal amino acid absorption","synonyms":[{"name":"activation of renal amino acid absorption","type":"narrow"},{"name":"up regulation of renal amino acid absorption","type":"exact"},{"name":"up-regulation of renal amino acid absorption","type":"exact"},{"name":"upregulation of renal amino acid absorption","type":"exact"}],"termid":"GO:1902754"}


id: MOD:00819
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to L-2-aminobutanoic acid.","definition_xrefs":["ChEBI:35619","DeltaMass:0","RESID:AA0409","PubMed:11740505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-2-aminobutanoic acid (Glu)","synonyms":[{"name":"(S)-2-aminobutanoic acid","type":"exact"},{"name":"Abu","type":"exact"},{"name":"L-2-amino-n-butyric acid","type":"exact"},{"name":"L-2-aminobutanoic acid","type":"exact"},{"name":"L-2-aminobutyric acid","type":"exact"},{"name":"L-alpha-amino-n-butyric acid","type":"exact"},{"name":"L-alpha-aminobutyric acid","type":"exact"},{"name":"L-butyrine","type":"exact"},{"name":"alpha-amino-n-butyric acid","type":"exact"},{"name":"alpha-aminobutyric acid","type":"exact"},{"name":"butyrine","type":"exact"},{"name":"dCbxGlu","type":"exact"}],"termid":"MOD:00819"}


id: PBO:0002248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase (predicted)","termid":"PBO:0002248"}


id: GO:0061317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes. In this pathway, the activated receptor signals via downstream effectors that result in the inhibition of beta-catenin phosphorylation, thereby preventing degradation of beta-catenin and contributing to cardiac muscle cell fate commitment. Stabilized beta-catenin can then accumulate and travel to the nucleus to trigger changes in transcription of target genes.","definition_xrefs":["PMID:17576928","GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment (obsolete GO:0061317)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"}],"termid":"GO:0061317"}


id: GO:0060734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of eIF2 alpha phosphorylation as a cellular response to endoplasmic reticulum stress.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"is_a","term_name":"regulation of translational initiation","termid":"GO:0006446"},{"relation_name":"is_a","term_name":"regulation of response to endoplasmic reticulum stress","termid":"GO:1905897"},{"relation_name":"regulates","term_name":"eiF2alpha phosphorylation in response to endoplasmic reticulum stress","termid":"GO:0036492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation","synonyms":[{"name":"regulation of ER stress-induced eIF2 alpha phosphorylation","type":"exact"},{"name":"regulation of eIF2 alpha phosphorylation by ER stress","type":"exact"},{"name":"regulation of eIF2 alpha phosphorylation by endoplasmic reticulum stress","type":"exact"}],"termid":"GO:0060734"}


id: PR:O43037
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mnh1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein mago nashi homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.08c","synonyms":[{"name":"Spom972h-mnh1","type":"exact"}],"termid":"PR:O43037"}


id: GO:0060058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell death by apoptotic process of mammary epithelial cells during mammary gland involution.","definition_xrefs":["GOC:dph","GOC:mtg_apoptosis","PMID:15282149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process involved in morphogenesis","termid":"GO:1902339"},{"relation_name":"positively_regulates","term_name":"apoptotic process involved in mammary gland involution","termid":"GO:0060057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptotic process involved in mammary gland involution","synonyms":[{"name":"positive regulation of apoptosis involved in mammary gland involution","type":"narrow"}],"termid":"GO:0060058"}


id: GO:0071574
data:
  {"annotated_genes":["SJAG_04461","SJAG_00333","SJAG_04597","SJAG_03602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87188,101404],"is_not":false,"summary":null,"term":"GO:0071574"},{"annotations":[90467],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0140325"},{"annotations":[94495],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0120047"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, the medial cortex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell cortex","termid":"GO:0072697"},{"relation_name":"is_a","term_name":"protein localization to cell division site","termid":"GO:0072741"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00333":null,"SJAG_03602":null,"SJAG_04461":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to medial cortex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to medial cortex","type":"exact"}],"termid":"GO:0071574","terms_by_termid":{"GO:0071574":null,"GO:0120047":null,"GO:0140325":null}}


id: GO:0071996
data:
  {"annotated_genes":["SJAG_05213","SJAG_01344","SJAG_03497"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92131,93119,114267],"is_not":false,"summary":null,"term":"GO:0071996"}]},"cv_name":"biological_process","definition":"The directed movement of glutathione into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"glutathione transmembrane transport","termid":"GO:0034775"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03497":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"glutathione transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glutathione transport into vacuole","type":"exact"}],"termid":"GO:0071996","terms_by_termid":{"GO:0071996":null}}


id: FYPO:0005199
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of a protein kinase activity occurs to a lower extent than normal.","definition_xrefs":["PMID:14739927","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of catalytic activity","termid":"FYPO:0004916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased negative regulation of protein kinase activity","synonyms":[{"name":"decreased inhibition of protein kinase activity","type":"narrow"},{"name":"decreased negative regulation of protein kinase activity during mitotic cell cycle","type":"related"},{"name":"decreased negative regulation of protein kinase activity during vegetative growth","type":"exact"},{"name":"reduced negative regulation of protein kinase activity","type":"exact"}],"termid":"FYPO:0005199"}


id: PBO:0059697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 5","termid":"PBO:0059697"}


id: PBO:0081863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 799","termid":"PBO:0081863"}


id: GO:0036101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of leukotriene B4, a leukotriene composed of (6Z,8E,10E,14Z)-eicosatetraenoic acid having (5S)- and (12R)-hydroxy substituents.","definition_xrefs":["GOC:yaf","PMID:9799565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene catabolic process","termid":"GO:0036100"},{"relation_name":"is_a","term_name":"leukotriene B4 metabolic process","termid":"GO:0036102"},{"relation_name":"is_a","term_name":"long-chain fatty acid catabolic process","termid":"GO:0042758"},{"relation_name":"is_a","term_name":"icosanoid catabolic process","termid":"GO:1901523"},{"relation_name":"is_a","term_name":"organic hydroxy compound catabolic process","termid":"GO:1901616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044248","GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"leukotriene B4 catabolic process","synonyms":[{"name":"LTB4 catabolism","type":"exact"},{"name":"leukotriene B4 breakdown","type":"exact"},{"name":"leukotriene B4 catabolism","type":"exact"},{"name":"leukotriene B4 degradation","type":"exact"}],"termid":"GO:0036101"}


id: GO:1904164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of triglyceride homeostasis.","definition_xrefs":["GOC:TermGenie","GOC:rph","GO_REF:0000058","PMID:22541436","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of triglyceride homeostasis (obsolete GO:1904164)","synonyms":[{"name":"down regulation of triacylglycerol homeostasis","type":"exact"},{"name":"down regulation of triglyceride homeostasis","type":"exact"},{"name":"down-regulation of triacylglycerol homeostasis","type":"exact"},{"name":"down-regulation of triglyceride homeostasis","type":"exact"},{"name":"downregulation of triacylglycerol homeostasis","type":"exact"},{"name":"downregulation of triglyceride homeostasis","type":"exact"},{"name":"inhibition of triacylglycerol homeostasis","type":"narrow"},{"name":"inhibition of triglyceride homeostasis","type":"narrow"},{"name":"negative regulation of triacylglycerol homeostasis","type":"exact"}],"termid":"GO:1904164"}


id: GO:0050849
data:
  {"annotated_genes":["SJAG_03799","SJAG_02858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97053,112203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106057"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of calcium-mediated signaling.","definition_xrefs":["GOC:ai","PMID:11696592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium-mediated signaling","termid":"GO:0050848"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"calcium-mediated signaling","termid":"GO:0019722"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02858":null,"SJAG_03799":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcium-mediated signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of calcium-mediated signaling","type":"exact"},{"name":"down-regulation of calcium-mediated signaling","type":"exact"},{"name":"downregulation of calcium-mediated signaling","type":"exact"},{"name":"inhibition of calcium-mediated signaling","type":"narrow"},{"name":"negative regulation of calcium-mediated signalling","type":"exact"}],"termid":"GO:0050849","terms_by_termid":{"GO:0106057":null}}


id: PBO:0062536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily G member 1","termid":"PBO:0062536"}


id: SO:0000154
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The P1-derived artificial chromosome are DNA constructs that are derived from the DNA of P1 bacteriophage. They can carry large amounts (about 100-300 kilobases) of other sequences for a variety of bioengineering purposes. It is one type of vector used to clone DNA fragments (100- to 300-kb insert size; average, 150 kb) in Escherichia coli cells.","direct_ancestors":[{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAC","secondary_identifiers":["http://en.wikipedia.org/wiki/P1-derived_artificial_chromosome"],"synonyms":[{"name":"P1","type":"exact"},{"name":"P1 artificial chromosome","type":"exact"}],"termid":"SO:0000154"}


id: PR:O74828
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ESF1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02698","PANTHER:PTHR12202:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-rRNA-processing protein esf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.01c","secondary_identifiers":["UniProtKB:O74828"],"synonyms":[{"name":"Spom972h-ESF1","type":"exact"}],"termid":"PR:O74828"}


id: MOD:01416
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to a dihydroxylated isoleucine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroxylated residue","termid":"MOD:00428"},{"relation_name":"is_a","term_name":"hydroxylated isoleucine","termid":"MOD:01414"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxylated isoleucine","synonyms":[{"name":"Hy2Ile","type":"exact"}],"termid":"MOD:01416"}


id: PBO:0055944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC52 antisense RNA 1","termid":"PBO:0055944"}


id: PBO:0028261
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short_cytoplasmic_microtubules_present_in_decreased_numbers","termid":"PBO:0028261"}


id: PBO:0060406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 20, NatB catalytic subunit","termid":"PBO:0060406"}


id: GO:0140492
data:
  {"annotated_genes":["SJAG_00742","SJAG_02900","SJAG_02244","SJAG_04215","SJAG_03686","SJAG_00546","SJAG_01528","SJAG_00573","SJAG_01281","SJAG_01312","SJAG_02341","SJAG_02419","SJAG_00764","SJAG_00795","SJAG_03429","SJAG_04651","SJAG_03752"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84561,87688,90199,91360,92463,92607,95929,100668,101685,101850,106390,107826,109691,110881,111239,111312,112025],"is_not":false,"summary":null,"term":"GO:0140492"}]},"cv_name":"molecular_function","definition":"An metal-dependent isopeptidase activity that cleaves ubiquitin from a target protein to which it is conjugated.","definition_xrefs":["PMID:19489724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metallopeptidase activity","termid":"GO:0008237"},{"relation_name":"is_a","term_name":"deubiquitinase activity","termid":"GO:0101005"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00546":null,"SJAG_00573":null,"SJAG_00742":null,"SJAG_00764":null,"SJAG_00795":null,"SJAG_01281":null,"SJAG_01312":null,"SJAG_01528":null,"SJAG_02244":null,"SJAG_02341":null,"SJAG_02419":null,"SJAG_02900":null,"SJAG_03429":null,"SJAG_03686":null,"SJAG_03752":null,"SJAG_04215":null,"SJAG_04651":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0008233","GO:0016787","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"metal-dependent deubiquitinase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"metal-dependent ubiquitin-like hydrolase activity","type":"exact"},{"name":"metal-dependent ubiquitinyl-like hydrolase activity","type":"exact"}],"termid":"GO:0140492","terms_by_termid":{"GO:0140492":null}}


id: GO:0102429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: genistin + UDP-alpha-D-glucose = genistin 7-gentiobioside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete genistein-3-O-glucoside 1,6-glucosyltransferase activity (obsolete GO:0102429)","termid":"GO:0102429"}


id: PBO:0048589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase light chain family member 3","termid":"PBO:0048589"}


id: PBO:0080180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VDAC2 pseudogene 1","termid":"PBO:0080180"}


id: FYPO:0001913
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which ubiquitin ligase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal ubiquitin ligase activity","termid":"FYPO:0001912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"abolished ubiquitin ligase activity","synonyms":[{"name":"abolished ubiquitin-protein ligase activity","type":"exact"},{"name":"ubiquitin ligase activity abolished","type":"exact"}],"termid":"FYPO:0001913"}


id: PBO:0113474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TORC2, a regulator of plasma membrane (PM) homeostasis; TORC2 also regulates actin cytoskeletal dynamics during polarized growth and cell wall integrity; interacts with Slm1p and Slm2p, homologous PH domain-containing TORC2 substrates; PM retention is dependent on Avo3p; BIT61 has a paralog, BIT2, that arose from the whole genome duplication","termid":"PBO:0113474"}


id: FYPO:0006815
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in centromere inner repeat regions occurs to a greater extent than normal.","definition_xrefs":["PMID:30652128","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0005310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K14 acetylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"increased histone H3-K14 acetylation at centromere imr during vegetative growth","type":"exact"},{"name":"increased histone H3-K14 acetylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K14 acetylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"increased histone H3K14 acetylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006815"}


id: PATO:0002092
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphology quality inhering in a neoplastic cell by virtue of the bearer's exhibiting breakdown of cell-cell interaction maintaining tissue architecture, proliferative dysregulation and bizarre modification to nucleus size and shape.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphology","termid":"PATO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaplastic","termid":"PATO:0002092"}


id: PBO:0054056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1398","termid":"PBO:0054056"}


id: PR:O94512
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC646.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol-binding protein-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC646.08c","synonyms":[{"name":"Spom972h-SPBC646.08c","type":"exact"}],"termid":"PR:O94512"}


id: PBO:0047035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 98 member C","termid":"PBO:0047035"}


id: GO:1905718
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any microtubule end that is part of a mitotic spindle astral microtubule.","definition_xrefs":["GO_REF:0000064","GOC:TermGenie","PMID:11007487"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic spindle astral microtubule end (obsolete GO:1905718)","synonyms":[{"name":"mitotic spindle astral microtubule tip","type":"exact"}],"termid":"GO:1905718"}


id: PBO:0071206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 47","termid":"PBO:0071206"}


id: PBO:0088749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 Ubc1","termid":"PBO:0088749"}


id: PBO:0085013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulatory subunit of protein phosphatase 1 (Ppz1p); involved in coenzyme A biosynthesis; subunit of phosphopantothenoylcysteine decarboxylase (PPCDC: Cab3p, Sis2p, Vhs3p) complex and the CoA-Synthesizing Protein Complex (CoA-SPC: Cab2p, Cab3p, Cab4p, Cab5p, Sis2p and Vhs3p); SIS2 has a paralog, VHS3, that arose from the whole genome duplication","termid":"PBO:0085013"}


id: FYPO:0005089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which RNA polymerase II carboxy-terminal domain kinase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein kinase activity","termid":"FYPO:0001384"},{"relation_name":"is_a","term_name":"abnormal regulation of transcription","termid":"FYPO:0004526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0000707","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abolished RNA polymerase II carboxy-terminal domain kinase activity","synonyms":[{"name":"RNA polymerase II carboxy-terminal domain kinase activity abolished","type":"exact"}],"termid":"FYPO:0005089"}


id: PBO:0041521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16 open reading frame 54","termid":"PBO:0041521"}


id: GO:0018570
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: p-cumate + NADH + H+ + O2 = NAD+ + cis-2,3-dihydroxy-2,3-dihydro-p-cumate.","definition_xrefs":["RHEA:42344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"p-cumate 2,3-dioxygenase activity","secondary_identifiers":["EC:1.14.12.25","MetaCyc:RXN-664","UM-BBD_reactionID:r0395"],"termid":"GO:0018570"}


id: GO:0030136
data:
  {"annotated_genes":["SJAG_00916","SJAG_02240","SJAG_00669","SJAG_04517","SJAG_03404","SJAG_04644","SJAG_02453","SJAG_01809","SJAG_02805","SJAG_04565","SJAG_00379","SJAG_04609","SJAG_02282","SJAG_01600","SJAG_01167","SJAG_02177","SJAG_00108","SJAG_02789","SJAG_01428","SJAG_01748","SJAG_00104","SJAG_00800","SJAG_00152"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88250,95374,96396,97111,101759,102066],"is_not":false,"summary":null,"term":"GO:0030136"},{"annotations":[97183,114945,109063,108843],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[92328,104384,107653,107712],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[90946,108967],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[110945,114557],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030125"},{"annotations":[90244,84967],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030665"},{"annotations":[104847,95966],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034044"},{"annotations":[96250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030140"}]},"cv_name":"cellular_component","definition":"A vesicle with a coat formed of clathrin connected to the membrane via one of the clathrin adaptor complexes.","definition_xrefs":["GOC:mah","PMID:11252894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coated vesicle","termid":"GO:0030135"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00108":null,"SJAG_00152":null,"SJAG_00379":null,"SJAG_00669":null,"SJAG_00800":null,"SJAG_00916":null,"SJAG_01167":null,"SJAG_01428":null,"SJAG_01600":null,"SJAG_01748":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02240":null,"SJAG_02282":null,"SJAG_02453":null,"SJAG_02789":null,"SJAG_02805":null,"SJAG_03404":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04644":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"clathrin-coated vesicle","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao148845161"],"termid":"GO:0030136","terms_by_termid":{"GO:0030121":null,"GO:0030122":null,"GO:0030125":null,"GO:0030130":null,"GO:0030136":null,"GO:0030140":null,"GO:0030665":null,"GO:0034044":null}}


id: PBO:0089187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mpv17/PMP22 family protein 1","termid":"PBO:0089187"}


id: PBO:0057454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 573","termid":"PBO:0057454"}


id: PBO:0087427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit beta1 of the nascent polypeptide-associated complex (NAC); involved in protein targeting, associated with cytoplasmic ribosomes; enhances DNA binding of the Gal4p activator; homolog of human BTF3b; EGD1 has a paralog, BTT1, that arose from the whole genome duplication","termid":"PBO:0087427"}


id: GO:0033314
data:
  {"annotated_genes":["SJAG_03026","SJAG_04287","SJAG_01076","SJAG_02563","SJAG_01010","SJAG_02266","SJAG_01205","SJAG_00364","SJAG_01605","SJAG_04671","SJAG_03695","SJAG_02098","SJAG_03160","SJAG_01044","SJAG_03927","SJAG_02074","SJAG_02771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85183,87480,88575,90000,90022,95250,95416,96596,99384,102661,103890,105366,108094,112134,112884,113179,113350],"is_not":false,"summary":null,"term":"GO:0033314"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a mitotic DNA replication checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication checkpoint signaling","termid":"GO:0000076"},{"relation_name":"is_a","term_name":"mitotic DNA integrity checkpoint signaling","termid":"GO:0044774"},{"relation_name":"is_a","term_name":"mitotic G2/M transition checkpoint","termid":"GO:0044818"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01205":null,"SJAG_01605":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03160":null,"SJAG_03695":null,"SJAG_03927":null,"SJAG_04287":null,"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0023052","GO:0044772","GO:0008150"],"is_obsolete":false,"name":"mitotic DNA replication checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072459","GO:0072443","GO:0031574","GO:0072446"],"synonyms":[{"name":"S-M DNA replication checkpoint","type":"exact"},{"name":"S-M checkpoint","type":"exact"},{"name":"S-phase checkpoint","type":"broad"},{"name":"mitotic DNA replication checkpoint","type":"exact"},{"name":"mitotic cell cycle DNA replication checkpoint","type":"exact"},{"name":"signal transduction involved in S-M checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic DNA replication checkpoint","type":"narrow"},{"name":"signal transduction involved in mitotic G2/M transition decatenation checkpoint","type":"related"}],"termid":"GO:0033314","terms_by_termid":{"GO:0033314":null}}


id: PBO:0081268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 33B pseudogene 1","termid":"PBO:0081268"}


id: GO:0050672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of lymphocyte proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mononuclear cell proliferation","termid":"GO:0032945"},{"relation_name":"is_a","term_name":"regulation of lymphocyte proliferation","termid":"GO:0050670"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte activation","termid":"GO:0051250"},{"relation_name":"negatively_regulates","term_name":"lymphocyte proliferation","termid":"GO:0046651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lymphocyte proliferation","synonyms":[{"name":"down regulation of lymphocyte proliferation","type":"exact"},{"name":"down-regulation of lymphocyte proliferation","type":"exact"},{"name":"downregulation of lymphocyte proliferation","type":"exact"},{"name":"inhibition of lymphocyte proliferation","type":"narrow"}],"termid":"GO:0050672"}


id: GO:0060063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of the specialized region of the embryonic shield of the embryo that acts as the main signaling center establishing the teleost body plan.","definition_xrefs":["GOC:dph","PMID:9442883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Spemann organizer formation","termid":"GO:0060061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Spemann organizer formation at the embryonic shield","synonyms":[{"name":"Spemann's organizer formation at the embryonic shield","type":"exact"},{"name":"Spemann-Mangold organizer formation at the embryonic shield","type":"exact"}],"termid":"GO:0060063"}


id: GO:0031812
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a P2Y1 nucleotide receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled nucleotide receptor binding","termid":"GO:0031811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"P2Y1 nucleotide receptor binding","synonyms":[{"name":"P2Y1 nucleotide receptor ligand","type":"narrow"}],"termid":"GO:0031812"}


id: GO:1903572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of protein kinase D signaling.","definition_xrefs":["GO_REF:0000058","GOC:rl","GOC:TermGenie","PMID:20497126","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of protein kinase D signaling (obsolete GO:1903572)","synonyms":[{"name":"activation of PKD signal transduction","type":"narrow"},{"name":"activation of PKD signaling cascade","type":"related"},{"name":"activation of protein kinase D signal transduction","type":"narrow"},{"name":"activation of protein kinase D signaling","type":"narrow"},{"name":"activation of protein kinase D signaling cascade","type":"related"},{"name":"activation of protein kinase D signalling cascade","type":"related"},{"name":"positive regulation of PKD signal transduction","type":"exact"},{"name":"positive regulation of PKD signaling cascade","type":"related"},{"name":"positive regulation of protein kinase D signal transduction","type":"exact"},{"name":"positive regulation of protein kinase D signaling cascade","type":"related"},{"name":"positive regulation of protein kinase D signalling cascade","type":"related"},{"name":"up regulation of PKD signal transduction","type":"exact"},{"name":"up regulation of PKD signaling cascade","type":"related"},{"name":"up regulation of protein kinase D signal transduction","type":"exact"},{"name":"up regulation of protein kinase D signaling","type":"exact"},{"name":"up regulation of protein kinase D signaling cascade","type":"related"},{"name":"up regulation of protein kinase D signalling cascade","type":"related"},{"name":"up-regulation of PKD signal transduction","type":"exact"},{"name":"up-regulation of PKD signaling cascade","type":"related"},{"name":"up-regulation of protein kinase D signal transduction","type":"exact"},{"name":"up-regulation of protein kinase D signaling","type":"exact"},{"name":"up-regulation of protein kinase D signaling cascade","type":"related"},{"name":"up-regulation of protein kinase D signalling cascade","type":"related"},{"name":"upregulation of PKD signal transduction","type":"exact"},{"name":"upregulation of PKD signaling cascade","type":"related"},{"name":"upregulation of protein kinase D signal transduction","type":"exact"},{"name":"upregulation of protein kinase D signaling","type":"exact"},{"name":"upregulation of protein kinase D signaling cascade","type":"related"},{"name":"upregulation of protein kinase D signalling cascade","type":"related"}],"termid":"GO:1903572"}


id: FYPO:0004948
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a larger portion of the centromeric region of the chromosome than normal.","definition_xrefs":["PMID:17948055","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased spatial extent of heterochromatin assembly","termid":"FYPO:0007953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"increased spatial extent of centromeric heterochromatin assembly","synonyms":[{"name":"increased spatial extent of centromeric heterochromatin assembly during mitotic cell cycle","type":"related"},{"name":"increased spatial extent of centromeric heterochromatin assembly during vegetative growth","type":"exact"},{"name":"increased spatial extent of centromeric heterochromatin formation","type":"exact"}],"termid":"FYPO:0004948"}


id: PATO:0000425
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000425 continual (obsolete PATO:0000425)","termid":"PATO:0000425"}


id: PBO:0003636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh5 (predicted)","termid":"PBO:0003636"}


id: PBO:0092001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced P-specific trancription factor Pc","termid":"PBO:0092001"}


id: PBO:0088414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCF complex, Cul4-RING and CLRC ubiquitin ligase ligase E3 subunit Rbx1","termid":"PBO:0088414"}


id: PBO:0052518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 31","termid":"PBO:0052518"}


id: PBO:0044333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 16","termid":"PBO:0044333"}


id: FYPO:0006135
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of citrate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular citrate level","synonyms":[{"name":"increased cellular citrate anion level","type":"exact"},{"name":"increased cellular citrate level during mitotic cell cycle","type":"related"},{"name":"increased cellular citrate level during vegetative growth","type":"exact"},{"name":"increased citrate accumulation","type":"related"}],"termid":"FYPO:0006135"}


id: PBO:0074502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA activating complex polypeptide 1","termid":"PBO:0074502"}


id: PBO:0088473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudopeptidase Ecm14","termid":"PBO:0088473"}


id: GO:0005134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-2 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-2 receptor binding","synonyms":[{"name":"IL-2","type":"narrow"},{"name":"interleukin-2 receptor ligand","type":"narrow"}],"termid":"GO:0005134"}


id: PBO:0078249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 25/OR9-2 (pseudogene)","termid":"PBO:0078249"}


id: MOD:01568
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a serine residue with the Applied Biosystems iTRAQ8plex-118 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-118 reporter+balance reagent acylated residue","termid":"MOD:01563"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-serine","termid":"MOD:02003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"iTRAQ8plex-118 reporter+balance reagent O3-acylated serine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01568"}


id: PBO:0053966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1276","termid":"PBO:0053966"}


id: PBO:0080662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAP four-disulfide core domain 8","termid":"PBO:0080662"}


id: FYPO:0001028
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in any part of interphase, under conditions where arrest is not a normal occurrence.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested mitotic cell cycle progression","termid":"FYPO:0000502"},{"relation_name":"is_a","term_name":"cell cycle arrest in mitotic interphase","termid":"FYPO:0000837"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abnormal cell cycle arrest in mitotic interphase","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abnormal mitotic cell cycle arrest in interphase","type":"exact"},{"name":"abnormal mitotic interphase cell cycle arrest","type":"exact"}],"termid":"FYPO:0001028","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0064240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol specific phospholipase C X domain containing 3","termid":"PBO:0064240"}


id: GO:0035172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of hemocytes, resulting in the expansion of the cell population. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) which are involved in defense and clotting of hemolymph, but not involved in transport of oxygen.","definition_xrefs":["GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hemocyte proliferation","synonyms":[{"name":"arthropod blood cell proliferation","type":"exact"}],"termid":"GO:0035172"}


id: PBO:0090629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit Tho4","termid":"PBO:0090629"}


id: GO:1904547
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98451],"is_not":false,"summary":null,"term":"GO:1904547"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to glucose starvation.","definition_xrefs":["GO_REF:0000058","PMID:21118717","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"cellular response to glucose starvation","termid":"GO:0042149"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to glucose starvation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1904547","terms_by_termid":{"GO:1904547":null}}


id: PBO:0048762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germ cell-less 2, spermatogenesis associated","termid":"PBO:0048762"}


id: GO:0031952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of addition of the phosphorylation by a protein of one or more of its own residues.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"regulates","term_name":"protein autophosphorylation","termid":"GO:0046777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein autophosphorylation","synonyms":[{"name":"regulation of protein amino acid autophosphorylation","type":"exact"}],"termid":"GO:0031952"}


id: PBO:0018090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribokinase Rbk1 (predicted)","termid":"PBO:0018090"}


id: PBO:0085955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; null mutant lacks mitochondrial DNA and cannot grow on glycerol; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0085955"}


id: GO:1905595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of low-density lipoprotein particle receptor binding.","definition_xrefs":["PMID:22848640","GOC:BHF","GOC:nc","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor binding","termid":"GO:1900120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of low-density lipoprotein particle receptor binding","synonyms":[{"name":"regulation of LDL receptor binding","type":"exact"},{"name":"regulation of low-density lipoprotein receptor binding","type":"exact"}],"termid":"GO:1905595"}


id: PBO:0052859
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 5-2","termid":"PBO:0052859"}


id: GO:0044619
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id: PBO:0057014
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id: PBO:0042022
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id: FYECO:0000258
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id: PBO:0073869
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member B1 pseudogene 5","termid":"PBO:0073869"}


id: GO:0035503
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id: PBO:0086425
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id: PBO:0076631
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBL1X/Y related 1","termid":"PBO:0076631"}


id: GO:0005011
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id: PBO:0005393
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id: FYECO:0000226
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id: GO:0002335
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id: PBO:0085529
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id: PBO:0005513
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id: PBO:0039594
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id: GO:0031966
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id: PBO:0089758
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id: GO:0140135
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id: GO:0032216
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id: PBO:0089157
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id: PBO:0053020
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id: PBO:0035971
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id: PBO:0039453
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id: GO:1903217
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id: GO:0042851
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id: PBO:0061613
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id: MOD:01318
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id: SO:0000623
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id: GO:0099512
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id: PBO:0056751
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id: GO:1903656
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of type IV pilus biogenesis.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25049409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell projection assembly","termid":"GO:0060491"},{"relation_name":"regulates","term_name":"type IV pilus assembly","termid":"GO:0043683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of type IV pilus biogenesis","synonyms":[{"name":"regulation of TFP biogenesis","type":"exact"},{"name":"regulation of type 4 pilus biogenesis","type":"exact"},{"name":"regulation of type IV fimbria assembly","type":"exact"},{"name":"regulation of type IV fimbria biogenesis","type":"exact"},{"name":"regulation of type IV fimbriae assembly","type":"exact"},{"name":"regulation of type IV fimbriae biogenesis","type":"exact"},{"name":"regulation of type IV fimbrial assembly","type":"exact"},{"name":"regulation of type IV fimbrial biogenesis","type":"exact"},{"name":"regulation of type IV fimbrium assembly","type":"exact"},{"name":"regulation of type IV fimbrium biogenesis","type":"exact"},{"name":"regulation of type IV pilus biosynthesis","type":"exact"}],"termid":"GO:1903656"}


id: FYPO:0009040
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tea tree oil than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0002682","FYPO:0000003"],"is_obsolete":false,"name":"resistance to tea tree oil","synonyms":[{"name":"resistance to tea tree oil during mitotic cell cycle","type":"related"},{"name":"resistance to tea tree oil during vegetative growth","type":"exact"},{"name":"resistant to tea tree oil","type":"exact"}],"termid":"FYPO:0009040"}


id: GO:0042906
data:
  {"annotated_genes":["SJAG_04717"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84503],"is_not":false,"summary":null,"term":"GO:0042906"}]},"cv_name":"biological_process","definition":"The directed movement of xanthine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Xanthine (2,6-dihydroxypurine) is a purine formed in the metabolic breakdown of guanine, but is not present in nucleic acids.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase transport","termid":"GO:0006863"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"xanthine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"xanthine transmembrane transport","type":"exact"}],"termid":"GO:0042906","terms_by_termid":{"GO:0042906":null}}


id: RO:0002410
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"This relation groups causal relations between material entities and causal relations between processes","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_dependence_to","termid":"RO:0002609"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_related_to","termid":"RO:0002410"}


id: SO:0001026
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A genome is the sum of genetic material within a cell or virion.","definition_xrefs":["SO:immuno_workshop"],"direct_ancestors":[{"relation_name":"has_part","term_name":"replicon","termid":"SO:0001235"},{"relation_name":"is_a","term_name":"sequence_collection","termid":"SO:0001260"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genome","secondary_identifiers":["http://en.wikipedia.org/wiki/Genome"],"termid":"SO:0001026"}


id: GO:0046333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving octopamine, 1-(p-hydroxyphenyl)-2-aminoethanol. The D enantiomer is about one-tenth as active as norepinephrine and is found in the salivary glands of Octopus and Eledone species.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"ethanolamine-containing compound metabolic process","termid":"GO:0042439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"octopamine metabolic process","synonyms":[{"name":"octopamine metabolism","type":"exact"}],"termid":"GO:0046333"}


id: GO:0035902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of being rendered immobile.","definition_xrefs":["PMID:19893991","PMID:17683801","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to immobilization stress","synonyms":[{"name":"response to immobilisation stress","type":"exact"},{"name":"response to restraint stress","type":"related"}],"termid":"GO:0035902"}


id: GO:0018289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of molybdenum into a metallo-sulfur cluster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal incorporation into metallo-sulfur cluster","termid":"GO:0018282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"molybdenum incorporation into metallo-sulfur cluster","synonyms":[{"name":"molybdenum incorporation into metallo-sulphur cluster","type":"exact"}],"termid":"GO:0018289"}


id: FYPO:0000102
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cisplatin. Cells stop growing (and may die) at a concentration of cisplatin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to cisplatin","synonyms":[{"name":"hypersensitive to cisplatin","type":"exact"},{"name":"sensitive to DDP","type":"broad"},{"name":"sensitive to cis-DDP","type":"exact"},{"name":"sensitive to cisplatin during mitotic cell cycle","type":"related"},{"name":"sensitive to cisplatin during vegetative growth","type":"exact"}],"termid":"FYPO:0000102"}


id: SO:0002035
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a lncRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA_primary_transcript","synonyms":[{"name":"lncRNA primary transcript","type":"exact"}],"termid":"SO:0002035"}


id: FYPO:0008055
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a Glc2Man9GlcNAc2 oligosaccharide glucosidase activity is decreased.","definition_xrefs":["PMID:23609449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased Glc2Man9GlcNAc2 oligosaccharide glucosidase activity","termid":"FYPO:0008055"}


id: PBO:0045993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EP300 interacting inhibitor of differentiation 1","termid":"PBO:0045993"}


id: PBO:0055263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2690","termid":"PBO:0055263"}


id: PBO:0059310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L51 pseudogene 1","termid":"PBO:0059310"}


id: PBO:0053026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine aminopeptidase 3 pseudogene 2","termid":"PBO:0053026"}


id: PBO:0012524
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_results_in_formation_of","termid":"PBO:0012524"}


id: GO:0046188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of methane, a colorless, odorless, flammable gas with the formula CH4. It is the simplest of the alkanes.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methane metabolic process","termid":"GO:0015947"},{"relation_name":"is_a","term_name":"alkane catabolic process","termid":"GO:0043448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044248"],"is_obsolete":false,"name":"methane catabolic process","synonyms":[{"name":"methane breakdown","type":"exact"},{"name":"methane catabolism","type":"exact"},{"name":"methane degradation","type":"exact"}],"termid":"GO:0046188"}


id: PBO:0060767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B4 pseudogene 11","termid":"PBO:0060767"}


id: GO:0019787
data:
  {"annotated_genes":["SJAG_00561","SJAG_00931","SJAG_05323","SJAG_05274","SJAG_02169","SJAG_04857","SJAG_01900","SJAG_04151","SJAG_04783","SJAG_04619","SJAG_02308","SJAG_03324","SJAG_01018","SJAG_03005","SJAG_01535","SJAG_04990","SJAG_04573","SJAG_01561","SJAG_01212","SJAG_01507","SJAG_03250","SJAG_00341","SJAG_02918","SJAG_02415","SJAG_03112","SJAG_02319","SJAG_02299","SJAG_02082","SJAG_00435","SJAG_05264","SJAG_04966","SJAG_03831","SJAG_03136","SJAG_03968","SJAG_03613","SJAG_02371","SJAG_03175","SJAG_01533","SJAG_01679","SJAG_02575","SJAG_01854","SJAG_01992","SJAG_03618","SJAG_05022","SJAG_06309","SJAG_02668","SJAG_00208","SJAG_03970","SJAG_03883","SJAG_00552","SJAG_00509","SJAG_02521","SJAG_00300","SJAG_04600","SJAG_04915","SJAG_03387","SJAG_00855","SJAG_05340","SJAG_00188","SJAG_00604","SJAG_01360","SJAG_00111","SJAG_00209","SJAG_00727","SJAG_02603","SJAG_03615","SJAG_00500","SJAG_01251","SJAG_03657","SJAG_03006","SJAG_01637","SJAG_01253","SJAG_04612","SJAG_02347","SJAG_02652","SJAG_00475","SJAG_01772","SJAG_02851","SJAG_04429","SJAG_02685","SJAG_02746","SJAG_00293","SJAG_03860","SJAG_01165","SJAG_03191","SJAG_00819","SJAG_05236","SJAG_01776","SJAG_04309","SJAG_01593","SJAG_00173"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[88962],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061651"},{"annotations":[105825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141046"},{"annotations":[105826,106331,86147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019776"},{"annotations":[112289,114910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140850"},{"annotations":[90410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140851"},{"annotations":[114458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061654"},{"annotations":[92271,100535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061656"},{"annotations":[85664,85820,100421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061665"},{"annotations":[104232,102501,110340,84082,98328,109054,112867,83868,84239,87293,98036,98176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061631"},{"annotations":[99091,108149,105695,91875,106019,106018,111484,104932,86787,101034,113279,84161,87122,106288,102921,94601,85857,99474,92581,84964,103005,112784,78785,113319,84297,108882,97246,84083,96320,101006,91455,92665,97365,103923,99489,110073,85612,100353,112785,114503,104059,109639,110393,85788,88816,92851,97930,87728,86266,90411,109463,100422,84093,109731,89624,101287,85960,85405,95455,101345,84382,92767,84704,101944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061630"},{"annotations":[100923,109704,87555,103246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061659"},{"annotations":[93451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004842"},{"annotations":[88747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034450"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a ubiquitin-like from one protein to another via the reaction X-ULP + Y = Y-ULP + X, where both X-ULP and Y-ULP are covalent linkages. ULP represents a ubiquitin-like protein.","definition_xrefs":["GOC:mah","PMID:10806345","PMID:10884686","GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":91,"genes_by_uniquename":{"SJAG_00111":null,"SJAG_00173":null,"SJAG_00188":null,"SJAG_00208":null,"SJAG_00209":null,"SJAG_00293":null,"SJAG_00300":null,"SJAG_00341":null,"SJAG_00435":null,"SJAG_00475":null,"SJAG_00500":null,"SJAG_00509":null,"SJAG_00552":null,"SJAG_00561":null,"SJAG_00604":null,"SJAG_00727":null,"SJAG_00819":null,"SJAG_00855":null,"SJAG_00931":null,"SJAG_01018":null,"SJAG_01165":null,"SJAG_01212":null,"SJAG_01251":null,"SJAG_01253":null,"SJAG_01360":null,"SJAG_01507":null,"SJAG_01533":null,"SJAG_01535":null,"SJAG_01561":null,"SJAG_01593":null,"SJAG_01637":null,"SJAG_01679":null,"SJAG_01772":null,"SJAG_01776":null,"SJAG_01854":null,"SJAG_01900":null,"SJAG_01992":null,"SJAG_02082":null,"SJAG_02169":null,"SJAG_02299":null,"SJAG_02308":null,"SJAG_02319":null,"SJAG_02347":null,"SJAG_02371":null,"SJAG_02415":null,"SJAG_02521":null,"SJAG_02575":null,"SJAG_02603":null,"SJAG_02652":null,"SJAG_02668":null,"SJAG_02685":null,"SJAG_02746":null,"SJAG_02851":null,"SJAG_02918":null,"SJAG_03005":null,"SJAG_03006":null,"SJAG_03112":null,"SJAG_03136":null,"SJAG_03175":null,"SJAG_03191":null,"SJAG_03250":null,"SJAG_03324":null,"SJAG_03387":null,"SJAG_03613":null,"SJAG_03615":null,"SJAG_03618":null,"SJAG_03657":null,"SJAG_03831":null,"SJAG_03860":null,"SJAG_03883":null,"SJAG_03968":null,"SJAG_03970":null,"SJAG_04151":null,"SJAG_04309":null,"SJAG_04429":null,"SJAG_04573":null,"SJAG_04600":null,"SJAG_04612":null,"SJAG_04619":null,"SJAG_04783":null,"SJAG_04857":null,"SJAG_04915":null,"SJAG_04966":null,"SJAG_04990":null,"SJAG_05022":null,"SJAG_05236":null,"SJAG_05264":null,"SJAG_05274":null,"SJAG_05323":null,"SJAG_05340":null,"SJAG_06309":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"ubiquitin-like protein transferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-688137","Reactome:R-HSA-5678490","GO:0008640","GO:0008639"],"synonyms":[{"name":"E2","type":"broad"},{"name":"E3","type":"related"},{"name":"small conjugating protein ligase activity","type":"narrow"},{"name":"small conjugating protein transferase activity","type":"exact"},{"name":"small protein conjugating enzyme activity","type":"narrow"},{"name":"ubiquitin-like conjugating enzyme activity","type":"narrow"},{"name":"ubiquitin-like-protein ligase activity","type":"narrow"}],"termid":"GO:0019787","terms_by_termid":{"GO:0004842":null,"GO:0019776":null,"GO:0034450":null,"GO:0061630":null,"GO:0061631":null,"GO:0061651":null,"GO:0061654":null,"GO:0061656":null,"GO:0061659":null,"GO:0061665":null,"GO:0140850":null,"GO:0140851":null,"GO:0141046":null}}


