# terms

id: GO:1903725
data:
  {"annotated_genes":["SJAG_01906","SJAG_03940","SJAG_01187","SJAG_02380"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107433,111550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[108807,105782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071072"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phospholipid metabolic process.","definition_xrefs":["GOC:TermGenie","PMID:10657240","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid metabolic process","termid":"GO:0019216"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"regulates","term_name":"phospholipid metabolic process","termid":"GO:0006644"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01187":null,"SJAG_01906":null,"SJAG_02380":null,"SJAG_03940":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of phospholipid metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of phospholipid metabolism","type":"exact"}],"termid":"GO:1903725","terms_by_termid":{"GO:0071072":null,"GO:2001211":null}}


id: _global:regulated_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of regulates","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_downstream_of_or_within","termid":"_global:causally_downstream_of_or_within"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulated_by","secondary_identifiers":["RO:0002334"],"termid":"_global:regulated_by"}


id: PBO:0030366
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_multinucleate_multiseptate_vegetative_cell,_single_septa_between_nuclei","termid":"PBO:0030366"}


id: GO:0017142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete toxin susceptibility/resistance (obsolete GO:0017142)","synonyms":[{"name":"toxin susceptibility/resistance","type":"exact"}],"termid":"GO:0017142"}


id: PBO:0042370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD180 molecule","termid":"PBO:0042370"}


id: PBO:0002194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1761 family protein","termid":"PBO:0002194"}


id: GO:0045836
data:
  {"annotated_genes":["SJAG_00266","SJAG_03438"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[85124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of meiosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meiotic nuclear division","termid":"GO:0040020"},{"relation_name":"is_a","term_name":"positive regulation of meiotic cell cycle","termid":"GO:0051446"},{"relation_name":"is_a","term_name":"positive regulation of nuclear division","termid":"GO:0051785"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"meiotic nuclear division","termid":"GO:0140013"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_03438":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0140013","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of meiotic nuclear division","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of meiosis","type":"narrow"},{"name":"positive regulation of meiosis","type":"exact"},{"name":"stimulation of meiosis","type":"narrow"},{"name":"up regulation of meiosis","type":"exact"},{"name":"up-regulation of meiosis","type":"exact"},{"name":"upregulation of meiosis","type":"exact"}],"termid":"GO:0045836","terms_by_termid":{"GO:0010845":null,"GO:0010846":null}}


id: GO:0090176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising microtubules and their associated proteins and contributes to the establishment of planar polarity.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"part_of","term_name":"establishment of planar polarity","termid":"GO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"microtubule cytoskeleton organization involved in establishment of planar polarity","synonyms":[{"name":"microtubule cytoskeleton organisation involved in establishment of planar polarity","type":"exact"}],"termid":"GO:0090176"}


id: PBO:0068243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal pseudogene 5","termid":"PBO:0068243"}


id: PBO:0080082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 44","termid":"PBO:0080082"}


id: GO:0016402
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pristanoyl-CoA + O2 = trans-2,3-dehydropristanoyl-CoA + hydrogen peroxide.","definition_xrefs":["GOC:jsg","RHEA:40459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA oxidase activity","termid":"GO:0003997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"pristanoyl-CoA oxidase activity","secondary_identifiers":["Reactome:R-HSA-389891","Reactome:R-HSA-389889"],"termid":"GO:0016402"}


id: GO:1900436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to starvation.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to nutrient levels","termid":"GO:0032109"},{"relation_name":"is_a","term_name":"positive regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900430"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to starvation","termid":"GO:1900434"},{"relation_name":"positively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to starvation","termid":"GO:0036170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of filamentous growth of a population of unicellular organisms in response to starvation","synonyms":[{"name":"activation of filamentous growth of a population of unicellular organisms in response to starvation","type":"narrow"},{"name":"up regulation of filamentous growth of a population of unicellular organisms in response to starvation","type":"exact"},{"name":"up-regulation of filamentous growth of a population of unicellular organisms in response to starvation","type":"exact"},{"name":"upregulation of filamentous growth of a population of unicellular organisms in response to starvation","type":"exact"}],"termid":"GO:1900436"}


id: PBO:0067905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 207","termid":"PBO:0067905"}


id: GO:0106092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The extension of a glial cell process or projection to wrap around an axon.","definition_xrefs":["GOC:ha","PMID:27131624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon ensheathment","termid":"GO:0008366"},{"relation_name":"is_a","term_name":"glial cell projection elongation","termid":"GO:0106091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell projection elongation involved in axon ensheathment","termid":"GO:0106092"}


id: GO:0042819
data:
  {"annotated_genes":["SJAG_00283","SJAG_00707","SJAG_00691","SJAG_01543","SJAG_01881","SJAG_00252","SJAG_01383"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[95749,111767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[110459,96929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[91556,63544,83793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[107890],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"},{"annotations":[83795,91557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008615"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any of the vitamin B6 compounds; pyridoxal, pyridoxamine and pyridoxine and the active form, pyridoxal phosphate.","definition_xrefs":["PMID:30671974","GOC:jl","PMID:16157873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"},{"relation_name":"is_a","term_name":"vitamin B6 metabolic process","termid":"GO:0042816"},{"relation_name":"is_a","term_name":"pyridine-containing compound biosynthetic process","termid":"GO:0072525"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00252":null,"SJAG_00283":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_01383":null,"SJAG_01543":null,"SJAG_01881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"vitamin B6 biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"pyridoxine-5'-phosphate biosynthesis","type":"related"},{"name":"vitamin B6 anabolism","type":"exact"},{"name":"vitamin B6 biosynthesis","type":"exact"},{"name":"vitamin B6 formation","type":"exact"},{"name":"vitamin B6 synthesis","type":"exact"}],"termid":"GO:0042819","terms_by_termid":{"GO:0008615":null,"GO:0009443":null,"GO:0010144":null,"GO:0036001":null,"GO:0042821":null,"GO:0042823":null}}


id: PBO:0071828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 23","termid":"PBO:0071828"}


id: PR:O74841
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An FAD synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23293:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.04c","secondary_identifiers":["UniProtKB:O74841"],"synonyms":[{"name":"FAD pyrophosphorylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FMN adenylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FLAD1","type":"exact"},{"name":"flavin adenine dinucleotide synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74841"}


id: PBO:0044722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 9 (pseudogene)","termid":"PBO:0044722"}


id: GO:0106312
data:
  {"annotated_genes":["SJAG_03712"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94476],"is_not":false,"summary":null,"term":"GO:0106312"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (6S)-5-methyl-5,6,7,8-tetrahydrofolate + NAD+ = (6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + NADH + H+.","definition_xrefs":["RHEA:19821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylenetetrahydrofolate reductase (NAD(P)H) activity","termid":"GO:0004489"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"methylenetetrahydrofolate reductase (NADH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.5.1.54","MetaCyc:RXN-22438"],"termid":"GO:0106312","terms_by_termid":{"GO:0106312":null}}


id: PBO:0110398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAGE4 pseudogene 1","termid":"PBO:0110398"}


id: GO:0002607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of myeloid dendritic cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dendritic cell antigen processing and presentation","termid":"GO:0002604"},{"relation_name":"regulates","term_name":"myeloid dendritic cell antigen processing and presentation","termid":"GO:0002469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myeloid dendritic cell antigen processing and presentation","termid":"GO:0002607"}


id: PBO:0082099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"8-oxo-dGTP diphosphatase; prevents spontaneous mutagenesis via sanitization of oxidized purine nucleoside triphosphates; can also act as peroxisomal pyrophosphatase with specificity for coenzyme A and CoA derivatives, may function to remove potentially toxic oxidized CoA disulfide from peroxisomes to maintain the capacity for beta-oxidation of fatty acids; nudix hydrolase family member; similar E. coli MutT and human, rat and mouse MTH1","termid":"PBO:0082099"}


id: PBO:0083196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene HIR3; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0083196"}


id: PBO:0088161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"v-SNARE component of the vacuolar SNARE complex; involved in vesicle fusion; inhibits ATP-dependent Ca(2+) transport activity of Pmc1p in the vacuolar membrane","termid":"PBO:0088161"}


id: PBO:0001419
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHromodomain Protein","termid":"PBO:0001419"}


id: PBO:0072862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP","termid":"PBO:0072862"}


id: PBO:0047211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 221 member B","termid":"PBO:0047211"}


id: GO:0019515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lactose, via the intermediate UDP-galactose.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactose catabolic process","termid":"GO:0005990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"lactose catabolic process via UDP-galactose","synonyms":[{"name":"lactose breakdown via UDP-galactose","type":"exact"},{"name":"lactose degradation via UDP-galactose","type":"exact"}],"termid":"GO:0019515"}


id: GO:0022893
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the low-affinity transfer of L-tryptophan from one side of a membrane to the other. Tryptophan is 2-amino-3-(1H-indol-3-yl)propanoic acid. In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-tryptophan transmembrane transporter activity","termid":"GO:0015196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"low-affinity tryptophan transmembrane transporter activity","secondary_identifiers":["GO:0015510"],"synonyms":[{"name":"low-affinity tryptophan permease activity","type":"related"}],"termid":"GO:0022893"}


id: PBO:0062943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferation-associated 2G4 pseudogene 1","termid":"PBO:0062943"}


id: PBO:0088549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human HID1 ortholog 1, possible Golgi protein (by similarity)","termid":"PBO:0088549"}


id: PBO:0074053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 33","termid":"PBO:0074053"}


id: PBO:0091295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-glucosidase","termid":"PBO:0091295"}


id: GO:0160117
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: guanosine(6) in tRNA + S-adenosyl-L-methionine = H+ + N(2)-methylguanosine(6) in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.256","PMID:34669960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"tRNA (guanine) methyltransferase activity","termid":"GO:0016423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016741","GO:0003674","GO:0140098","GO:0016740","GO:0140101"],"is_obsolete":false,"name":"tRNA (guanine(6)-N2)-methyltransferase activity","secondary_identifiers":["RHEA:51116"],"synonyms":[{"name":"m(2)G6 methyltransferase","type":"exact"},{"name":"methyltransferase Trm14","type":"exact"}],"termid":"GO:0160117"}


id: PBO:0026832
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_at_mating_type_region","termid":"PBO:0026832"}


id: PBO:0078730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 4-2","termid":"PBO:0078730"}


id: MOD:01115
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an L-tryptophan residue with a group derived from an isoprene polymer, such as a geranyl (C10), farnesyl (C15) or geranylgeranyl (C20).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenylated residue","termid":"MOD:00703"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoprenylated tryptophan","synonyms":[{"name":"IpTrp","type":"exact"}],"termid":"MOD:01115"}


id: PBO:0066681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RLIG1 pseudogene 3","termid":"PBO:0066681"}


id: PBO:0075060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-23","termid":"PBO:0075060"}


id: PBO:0071754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1 pseudogene 1","termid":"PBO:0071754"}


id: GO:0005078
data:
  {"annotated_genes":["SJAG_04503","SJAG_03625","SJAG_01199"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93270,96031,113449],"is_not":false,"summary":null,"term":"GO:0005078"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that functions as a physical support for the assembly of a multiprotein mitogen-activated protein kinase (MAPK) complex. Binds multiple kinases of the MAPKKK cascade, and also upstream signaling proteins, permitting those molecules to function in a coordinated way. Bringing together multiple enzymes and their substrates enables the signal to be transduced quickly and efficiently.","definition_xrefs":["PMID:15213240","PMID:12511654","PMID:9405336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling adaptor activity","termid":"GO:0035591"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01199":null,"SJAG_03625":null,"SJAG_04503":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"MAP-kinase scaffold activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MAP-kinase scaffold protein activity","type":"exact"}],"termid":"GO:0005078","terms_by_termid":{"GO:0005078":null}}


id: PBO:0088659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocytic trafficking protein","termid":"PBO:0088659"}


id: PBO:0084435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAL-activator protein; transcription factor; part of the complex locus MAL6, plays a positive role in the regulation of maltose fermentation","termid":"PBO:0084435"}


id: PBO:0071751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L41 pseudogene 7","termid":"PBO:0071751"}


id: GO:0061557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for a trigeminal ganglion to attain its fully functional state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial ganglion maturation","termid":"GO:0061558"},{"relation_name":"part_of","term_name":"trigeminal nerve maturation","termid":"GO:0021635"},{"relation_name":"part_of","term_name":"trigeminal ganglion development","termid":"GO:0061551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminal ganglion maturation","synonyms":[{"name":"trigeminal ganglia maturation","type":"related"}],"termid":"GO:0061557"}


id: PBO:0044929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase eta","termid":"PBO:0044929"}


id: GO:0050728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the inflammatory response.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of defense response","termid":"GO:0031348"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"regulation of inflammatory response","termid":"GO:0050727"},{"relation_name":"negatively_regulates","term_name":"inflammatory response","termid":"GO:0006954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of inflammatory response","secondary_identifiers":["GO:0030236"],"synonyms":[{"name":"anti-inflammatory response","type":"exact"},{"name":"down regulation of inflammatory response","type":"exact"},{"name":"down-regulation of inflammatory response","type":"exact"},{"name":"downregulation of inflammatory response","type":"exact"},{"name":"inhibition of inflammatory response","type":"narrow"}],"termid":"GO:0050728"}


id: PR:O14157
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- myp2 gene.","definition_xrefs":["UniProtKB:O14157","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin type-2 heavy chain 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.05c","synonyms":[{"name":"Spom972h-myp2","type":"exact"},{"name":"myosin type II heavy chain 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14157"}


id: GO:0120023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to somatostatin, a polypeptide hormone involved in regulating pancreatic alpha and pancreatic beta cells and controlling growth hormone secretion as well as many other functions. Somatostatin is produced by several cell types including pancreatic delta cells. There are several different mature forms of somatostatin.","definition_xrefs":["GOC:cvs","PMID:20472043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone binding","termid":"GO:0017046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"somatostatin binding","termid":"GO:0120023"}


id: GO:0019028
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles. It comprises numerous regularly arranged subunits, or capsomeres.","definition_xrefs":["GOC:mtg_sensu","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral capsid","secondary_identifiers":["GO:0046728","Wikipedia:Capsid"],"termid":"GO:0019028"}


id: GO:0050677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of urothelial cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of urothelial cell proliferation","termid":"GO:0050675"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"positively_regulates","term_name":"urothelial cell proliferation","termid":"GO:0050674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of urothelial cell proliferation","synonyms":[{"name":"activation of urothelial cell proliferation","type":"narrow"},{"name":"stimulation of urothelial cell proliferation","type":"narrow"},{"name":"up regulation of urothelial cell proliferation","type":"exact"},{"name":"up-regulation of urothelial cell proliferation","type":"exact"},{"name":"upregulation of urothelial cell proliferation","type":"exact"}],"termid":"GO:0050677"}


id: GO:0060327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin filament-based movement by which cytoplasmic actin filaments slide past one another resulting in a contraction that propels the cell from one place to another.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-mediated cell contraction","termid":"GO:0070252"},{"relation_name":"part_of","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasmic actin-based contraction involved in cell motility","termid":"GO:0060327"}


id: PBO:0051045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 1-14 (non-functional)","termid":"PBO:0051045"}


id: PBO:0035845
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_trimethylation_at_centromere_inner_repeat_during_vegetative_growth","termid":"PBO:0035845"}


id: PBO:0076622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor D","termid":"PBO:0076622"}


id: PBO:0066305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination signal binding protein for immunoglobulin kappa J region","termid":"PBO:0066305"}


id: GO:0141098
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cytidine(34) in tRNA + S-adenosyl-L-methionine = 2'-O-methylcytidine(34) in tRNA + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:31943105","RHEA:43084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (cytidine) methyltransferase activity","termid":"GO:0016427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0140098","GO:0140101","GO:0016741"],"is_obsolete":false,"name":"tRNA (cytidine(34)-2'-O)-methyltransferase activity","secondary_identifiers":["EC:2.1.1.207"],"synonyms":[{"name":"tRNA (cytidine 34-2'-O)-methyltransferase activity","type":"exact"}],"termid":"GO:0141098"}


id: PBO:0029362
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_centromeric_outer_repeat_transcript_level","termid":"PBO:0029362"}


id: GO:2000347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hepatocyte proliferation.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation","termid":"GO:0050679"},{"relation_name":"is_a","term_name":"regulation of hepatocyte proliferation","termid":"GO:2000345"},{"relation_name":"positively_regulates","term_name":"hepatocyte proliferation","termid":"GO:0072574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hepatocyte proliferation","termid":"GO:2000347"}


id: PBO:0070399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ROS proto-oncogene 1, receptor tyrosine kinase","termid":"PBO:0070399"}


id: PBO:0082880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex; role in anaphase progression; Rtt101p-Mms22p ligase associates with replisome complex during S phase via Ctf4p; required for recovery after DSB repair; implicated in Mms22-dependent DNA repair; involved with Mms1p in nonfunctional rRNA decay; modified by the ubiquitin-like protein, Rub1p","termid":"PBO:0082880"}


id: PBO:0054896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2310","termid":"PBO:0054896"}


id: PBO:0027024
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_L-aminoadipate-semialdehyde_dehydrogenase_activity","termid":"PBO:0027024"}


id: PR:O14141
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Maf-like protein YhdE that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02236","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maf-like protein C3G6.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.03c","secondary_identifiers":["UniProtKB:O14141"],"synonyms":[{"name":"Spom972h-yhdE","type":"exact"}],"termid":"PR:O14141"}


id: GO:0036120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a platelet-derived growth factor stimulus.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to platelet-derived growth factor","termid":"GO:0036119"},{"relation_name":"is_a","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to platelet-derived growth factor stimulus","synonyms":[{"name":"cellular response to PDGF stimulus","type":"exact"}],"termid":"GO:0036120"}


id: GO:0036027
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that contains protein C inhibitor (SERPINA5) and urokinase-type plasminogen activator (PLAU); formation of the complex inhibits the serine protease activity of urokinase-type plasminogen activator.","definition_xrefs":["PMID:3501295","GOC:ans","PMID:8536714","PMID:10340997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine protease inhibitor complex","termid":"GO:0097180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein C inhibitor-PLAU complex","synonyms":[{"name":"PCI-PLAU complex","type":"exact"},{"name":"SERPINA5-PLAU complex","type":"exact"},{"name":"plasma serine protease inhibitor-PLAU complex","type":"exact"},{"name":"protein C inhibitor-U-plasminogen activator complex","type":"exact"},{"name":"protein C inhibitor-uPA complex","type":"exact"},{"name":"protein C inhibitor-urokinase-type plasminogen activator complex","type":"exact"},{"name":"serpin A5-PLAU complex","type":"exact"}],"termid":"GO:0036027"}


id: GO:0003282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the ventricular septum intermedium over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septum development","termid":"GO:0003281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular septum intermedium development","termid":"GO:0003282"}


id: PBO:0031289
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_sister_chromatid_segregation","termid":"PBO:0031289"}


id: GO:0004195
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of Leu-Xaa bond in angiotensinogen to generate angiotensin I.","definition_xrefs":["EC:3.4.23.15"],"gene_count":0,"genotype_count":0,"name":"obsolete renin activity (obsolete GO:0004195)","synonyms":[{"name":"angiotensin-forming enzyme activity","type":"related"},{"name":"angiotensinogenase activity","type":"related"},{"name":"renin activity","type":"exact"}],"termid":"GO:0004195"}


id: PBO:0072254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 29","termid":"PBO:0072254"}


id: GO:0102696
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + cis-zeatin = H+ + 9-(alpha-D-glucosyl)-cis-zeatin + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-zeatin UDP glycosyltransferase activity (obsolete GO:0102696)","termid":"GO:0102696"}


id: PBO:0113206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial DNA-binding and packaging factor; mtDNA maintenance factor involved in mitochondrial DNA replication and recombination, regulating mtDNA copy number in opposition to DPI34; HMG1 DNA-binding protein family member containing two HMG-boxes; activity may be regulated by protein kinase A phosphorylation; ABF2 has a paralog, IXR1, that arose from the whole genome duplication; human homolog TFAM can complement yeast abf2 mutant, rescuing the loss-of-mitochondrial DNA phenotype","termid":"PBO:0113206"}


id: GO:0030830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of cGMP.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cGMP catabolic process (obsolete GO:0030830)","synonyms":[{"name":"down regulation of cGMP catabolic process","type":"exact"},{"name":"down-regulation of cGMP catabolic process","type":"exact"},{"name":"downregulation of cGMP catabolic process","type":"exact"},{"name":"inhibition of cGMP catabolic process","type":"narrow"},{"name":"negative regulation of cGMP breakdown","type":"exact"},{"name":"negative regulation of cGMP catabolism","type":"exact"},{"name":"negative regulation of cGMP degradation","type":"exact"}],"termid":"GO:0030830"}


id: PBO:0039451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and MYND domain containing 2","termid":"PBO:0039451"}


id: PBO:0080144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle amine transport 1 like","termid":"PBO:0080144"}


id: SO:0000479
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that is trans-spliced.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"trans_spliced","termid":"SO:0000870"},{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trans_spliced_transcript","synonyms":[{"name":"INSDC_feature:tRNA","type":"broad"},{"name":"INSDC_qualifier:trans_splicing","type":"exact"},{"name":"trans spliced transcript","type":"exact"},{"name":"trans-spliced transcript","type":"exact"}],"termid":"SO:0000479"}


id: MOD:01148
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks the N6-amino of a peptidyl lysine with the carboxyl-terminal glycine of a ubiquitin.","definition_xrefs":["PubMed:11125103","PubMed:18688235"],"direct_ancestors":[{"relation_name":"contains","term_name":"N6-glycyl-L-lysine","termid":"MOD:00134"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"ubiquitinylated lysine","termid":"MOD:01148"}


id: PBO:0072494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 23","termid":"PBO:0072494"}


id: GO:0010149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A preprogrammed process associated with the dismantling of an anatomical structure and an overall decline in metabolism. This may include the breakdown of organelles, membranes and other cellular components. An example of this process is found in Arabidopsis thaliana, when older leaves or floral organs are shed.","definition_xrefs":["GOC:mtg_sensu","ISBN:0387987819"],"gene_count":0,"genotype_count":0,"name":"obsolete senescence (obsolete GO:0010149)","secondary_identifiers":["Wikipedia:Senescence"],"synonyms":[{"name":"senescence","type":"exact"}],"termid":"GO:0010149"}


id: GO:0106012
data:
  {"annotated_genes":["SJAG_03602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120047"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to the medial cortex.","definition_xrefs":["GOC:hjd","PMID:19474789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to medial cortex","termid":"GO:0106011"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to cell cortex","termid":"GO:1904778"},{"relation_name":"positively_regulates","term_name":"protein localization to medial cortex","termid":"GO:0071574"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to medial cortex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106012","terms_by_termid":{"GO:0120047":null}}


id: GO:0001900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates or increases the frequency, rate or extent of cytolysis by that organism of cells in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:tb","GOC:dph","GOC:add"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cytolysis by symbiont of host cells (obsolete GO:0001900)","synonyms":[{"name":"activation by symbiont of cytolysis of host cells","type":"narrow"},{"name":"positive regulation by symbiont of cytolysis of host cells","type":"exact"},{"name":"stimulation by symbiont of cytolysis of host cells","type":"narrow"},{"name":"up regulation by symbiont of cytolysis of host cells","type":"exact"},{"name":"up-regulation by symbiont of cytolysis of host cells","type":"exact"},{"name":"upregulation by symbiont of cytolysis of host cells","type":"exact"}],"termid":"GO:0001900"}


id: PBO:0042284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD1d molecule","termid":"PBO:0042284"}


id: PBO:0052915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 15-1","termid":"PBO:0052915"}


id: PBO:0057629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1204","termid":"PBO:0057629"}


id: GO:0006580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ethanolamine (2-aminoethanol), an important water-soluble base of phospholipid (phosphatidylethanolamine).","definition_xrefs":["ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol metabolic process","termid":"GO:0034308"},{"relation_name":"is_a","term_name":"ethanolamine-containing compound metabolic process","termid":"GO:0042439"},{"relation_name":"is_a","term_name":"primary amino compound metabolic process","termid":"GO:1901160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ethanolamine metabolic process","secondary_identifiers":["GO:0006645"],"synonyms":[{"name":"ethanolamine metabolism","type":"exact"}],"termid":"GO:0006580"}


id: FYPO:0005952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is normal (i.e. indistinguishable from wild type) in chromatin regions where RNA polymerase II actively transcribes genes. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:28218250","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nucleosome positioning in euchromatin","termid":"FYPO:0000857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal nucleosome occupancy at highly transcribed RNA polymerase II genes","synonyms":[{"name":"normal nucleosome occupancy at highly transcribed RNA polymerase II genes during mitotic cell cycle","type":"related"},{"name":"normal nucleosome occupancy at highly transcribed RNA polymerase II genes during vegetative growth","type":"exact"}],"termid":"FYPO:0005952"}


id: PBO:0073084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex assembly factor 4","termid":"PBO:0073084"}


id: FYPO:0003191
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to microtubules does not occur, and the protein is instead visible in one or a few foci or dots in the cytoplasm, during interphase of the mitotic cell cycle.","definition_xrefs":["PMID:18799626","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein localization to microtubule during mitotic interphase, with protein mislocalized to cytoplasmic foci","synonyms":[{"name":"abolished protein localisation to microtubule during mitotic interphase, with protein mislocalised to cytoplasmic foci","type":"exact"},{"name":"protein localization to microtubule abolished during interphase, with protein mislocalized to cytoplasmic foci, during vegetative growth","type":"exact"},{"name":"protein localization to microtubule abolished during mitotic interphase, with protein mislocalized to cytoplasmic foci","type":"exact"}],"termid":"FYPO:0003191"}


id: PBO:0001114
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.36","termid":"PBO:0001114"}


id: PATO:0001346
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A S. pombe mating type determined by the mat1-Pc and mat1-Pi on the mat1 locus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe mating type","termid":"PATO:0001343"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"h plus","synonyms":[{"name":"P","type":"exact"},{"name":"h+","type":"exact"}],"termid":"PATO:0001346"}


id: PBO:0070129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 43 pseudogene","termid":"PBO:0070129"}


id: GO:0097135
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin E2 and cyclin-dependent kinase 2 (CDK2). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["GOC:so","PMID:15935619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin E2-CDK2 complex","termid":"GO:0097135"}


id: PBO:0110062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3128 family, human c22orf39 ortholog, implicated in gene expression","termid":"PBO:0110062"}


id: PBO:0041745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAMTA1 antisense RNA 2","termid":"PBO:0041745"}


id: PBO:0077975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon CGC) 3-1","termid":"PBO:0077975"}


id: PBO:0084002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycerol kinase; converts glycerol to glycerol-3-phosphate; glucose repression of expression is mediated by Adr1p and Ino2p-Ino4p; derepression of expression on non-fermentable carbon sources is mediated by Opi1p and Rsf1p","termid":"PBO:0084002"}


id: GO:0062224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of somatic muscle development.","definition_xrefs":["PMID:16643882","PMID:25758712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of somatic muscle development","termid":"GO:0062223"},{"relation_name":"positively_regulates","term_name":"somatic muscle development","termid":"GO:0007525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of somatic muscle development","termid":"GO:0062224"}


id: PBO:0079781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A2, pseudogene","termid":"PBO:0079781"}


id: PBO:0042143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 3 pseudogene 1","termid":"PBO:0042143"}


id: PBO:0046845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 7","termid":"PBO:0046845"}


id: PBO:0027151
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_proline_level","termid":"PBO:0027151"}


id: GO:1902272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of (R)-carnitine transmembrane transport.","definition_xrefs":["GOC:TermGenie","PMID:23755272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"regulates","term_name":"(R)-carnitine transmembrane transport","termid":"GO:1902270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of (R)-carnitine transmembrane transport","termid":"GO:1902272"}


id: PBO:0090613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication checkpoint kinase Cds1","termid":"PBO:0090613"}


id: PBO:0053507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 491","termid":"PBO:0053507"}


id: PBO:0069497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 764, pseudogene","termid":"PBO:0069497"}


id: GO:0061614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cellular synthesis of microRNA (miRNA) transcripts. MicroRNA genes are synthesized as primary (pri) miRNA transcripts and subsequently processed to produce the ~22nt miRNAs that function in gene regulation.","definition_xrefs":["GOC:kmv","PMID:18778799","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"},{"relation_name":"is_a","term_name":"miRNA metabolic process","termid":"GO:0010586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"miRNA transcription","synonyms":[{"name":"miRNA gene transcription","type":"exact"},{"name":"microRNA gene transcription","type":"exact"},{"name":"pri-miRNA transcription by RNA polymerase II","type":"exact"},{"name":"pri-miRNA transcription from RNA polymerase II promoter","type":"exact"},{"name":"primary miRNA gene transcription","type":"exact"}],"termid":"GO:0061614"}


id: PBO:0003575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Kap109","termid":"PBO:0003575"}


id: PBO:0074731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 89","termid":"PBO:0074731"}


id: PBO:0089027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFACT, RNA-binding domain","termid":"PBO:0089027"}


id: GO:0032888
data:
  {"annotated_genes":["SJAG_00082","SJAG_03048","SJAG_04597","SJAG_02332","SJAG_04464","SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107074],"is_not":false,"summary":null,"term":"GO:0032888"},{"annotations":[98433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902845"},{"annotations":[86064,90471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902846"},{"annotations":[107496],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110161"},{"annotations":[111119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110162"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the cell cycle process in which the distance is lengthened between poles of the mitotic spindle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spindle elongation","termid":"GO:0032887"},{"relation_name":"part_of","term_name":"regulation of mitotic sister chromatid segregation","termid":"GO:0033047"},{"relation_name":"regulates","term_name":"mitotic spindle elongation","termid":"GO:0000022"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00244":null,"SJAG_02332":null,"SJAG_03048":null,"SJAG_04464":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic spindle elongation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032888","terms_by_termid":{"GO:0032888":null,"GO:0110161":null,"GO:0110162":null,"GO:1902845":null,"GO:1902846":null}}


id: PBO:0036267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS complex associated ATPase Bud32 (predicted)","termid":"PBO:0036267"}


id: PBO:0056816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 9","termid":"PBO:0056816"}


id: PBO:0016878
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific","termid":"PBO:0016878"}


id: PBO:0064189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XIIB","termid":"PBO:0064189"}


id: PBO:0058166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4460","termid":"PBO:0058166"}


id: PBO:0065637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 12","termid":"PBO:0065637"}


id: PBO:0042160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine ligand 21","termid":"PBO:0042160"}


id: PR:O74311
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-acetyltransferase MAK3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23091:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-alpha-acetyltransferase 30 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15D4.06","secondary_identifiers":["UniProtKB:O74311"],"synonyms":[{"name":"N-terminal acetyltransferase C complex catalytic subunit mak3 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NatC catalytic subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC15D4.06","type":"related"},{"name":"Spom972h-NAA30","type":"exact"},{"name":"mak3","type":"related"}],"termid":"PR:O74311"}


id: PBO:0077741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOB1 antisense RNA 1","termid":"PBO:0077741"}


id: PBO:0084863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; also predicted to be an S-adenosylmethionine-dependent RNA methyltransferase","termid":"PBO:0084863"}


id: GO:0034369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss or modification of a protein or lipid within a plasma lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase, with the subsequent loss of free fatty acid, and the esterification of cholesterol by phosphatidylcholine-sterol O-acyltransferase (lecithin cholesterol acyltransferase; LCAT).","definition_xrefs":["GOC:BHF","GOC:expert_pt","GOC:mah","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lipid complex remodeling","termid":"GO:0034368"},{"relation_name":"is_a","term_name":"plasma lipoprotein particle organization","termid":"GO:0071827"},{"relation_name":"part_of","term_name":"regulation of plasma lipoprotein particle levels","termid":"GO:0097006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasma lipoprotein particle remodeling","synonyms":[{"name":"plasma lipoprotein particle remodelling","type":"exact"}],"termid":"GO:0034369"}


id: PR:O13600
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sws1 gene.","definition_xrefs":["UniProtKB:O13600","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM domain-containing protein sws1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.06","synonyms":[{"name":"SWIM domain-containing and srs2-interacting protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sws1","type":"exact"}],"termid":"PR:O13600"}


id: PR:Q09843
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A replication factor C subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01799","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.02","secondary_identifiers":["UniProtKB:Q09843"],"synonyms":[{"name":"Spom972h-RFC4","type":"exact"},{"name":"activator 1 41 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"replication factor C2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09843"}


id: GO:0036331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of an avascular cornea over time, from its formation to the mature structure. Corneal avascularity (the absence of blood vessels in the cornea) is required for optical clarity and optimal vision. Avascular corneas are present in most animals, except Manatees.","definition_xrefs":["GOC:uh","PMID:17051153","PMID:16849433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cornea development in camera-type eye","termid":"GO:0061303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"avascular cornea development in camera-type eye","synonyms":[{"name":"avascular cornea development","type":"exact"}],"termid":"GO:0036331"}


id: PBO:0038675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase medium chain family member 2A","termid":"PBO:0038675"}


id: GO:0005222
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a cation by a channel that opens when intracellular cAMP has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly cyclic nucleotide-activated monoatomic cation channel activity","termid":"GO:0005221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"intracellularly cAMP-activated cation channel activity","synonyms":[{"name":"HCN channel activity","type":"broad"},{"name":"hyperpolarization-activated cyclic nucleotide-gated channel activity","type":"broad"},{"name":"intracellular 3',5' cAMP activated cation channel activity","type":"exact"},{"name":"intracellular 3',5'-cAMP activated cation channel activity","type":"exact"},{"name":"intracellular adenosine 3',5'-cyclophosphate activated cation channel activity","type":"exact"},{"name":"intracellular cAMP activated cation channel activity","type":"exact"},{"name":"intracellular cAMP-activated cation channel activity","type":"exact"},{"name":"intracellular cyclic AMP activated cation channel activity","type":"exact"}],"termid":"GO:0005222"}


id: GO:0070988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of removing one or more methyl groups from a molecule.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"demethylation","termid":"GO:0070988"}


id: GO:0042305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the characteristic structures of the mandibular segment following establishment of segment boundaries. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of segmental identity, head","termid":"GO:0007380"},{"relation_name":"part_of","term_name":"posterior head segmentation","termid":"GO:0035289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of segmental identity, mandibular segment","termid":"GO:0042305"}


id: PBO:0064655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPFIA binding protein 1","termid":"PBO:0064655"}


id: GO:0061369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of blood vessel morphogenesis in the testicle.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of blood vessel morphogenesis","termid":"GO:2000181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of testicular blood vessel morphogenesis","synonyms":[{"name":"negative regulation of testicular vasculature morphogenesis","type":"broad"}],"termid":"GO:0061369"}


id: PBO:0088627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinone biosynthesis protein Coq4","termid":"PBO:0088627"}


id: PBO:0045869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 beta 2 pseudogene 2","termid":"PBO:0045869"}


id: PBO:0049993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"huntingtin interacting protein 1 related","termid":"PBO:0049993"}


id: PBO:0040734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCR activator of RhoGEF and GTPase","termid":"PBO:0040734"}


id: GO:0031054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involved in the conversion of a pre-microRNA transcript into a mature microRNA molecule.","definition_xrefs":["GOC:sl","PMID:15211354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA processing","termid":"GO:0035196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"pre-miRNA processing","synonyms":[{"name":"pre-microRNA processing","type":"exact"}],"termid":"GO:0031054"}


id: PBO:0081217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZMIZ1 antisense RNA 1","termid":"PBO:0081217"}


id: FYPO:0004586
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of caffeine and hydroxyurea. Cells stop growing (and may die) at concentrations of caffeine and hydroxyurea that allow wild type cells to grow.","definition_xrefs":["PMID:10757807","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to caffeine and hydroxyurea","synonyms":[{"name":"hypersensitive to caffeine and hydroxyurea","type":"exact"},{"name":"sensitive to caffeine and HU","type":"exact"},{"name":"sensitive to caffeine and hydroxyurea during mitotic cell cycle","type":"related"},{"name":"sensitive to caffeine and hydroxyurea during vegetative growth","type":"exact"},{"name":"sensitive to caffeine and hydroxyurea in combination","type":"exact"}],"termid":"FYPO:0004586"}


id: PBO:0048841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceronephosphate O-acyltransferase","termid":"PBO:0048841"}


id: GO:0048505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process controlling the activation and/or rate at which relatively unspecialized cells acquire specialized features. Any process that modulates the rate, frequency or extent of the XXX at a consistent predetermined time point during its development.","definition_xrefs":["GOC:bf","GOC:jid","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of development, heterochronic","termid":"GO:0040034"},{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of timing of cell differentiation","synonyms":[{"name":"timing of cell differentiation","type":"related"}],"termid":"GO:0048505"}


id: GO:0051744
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: divinyl protochlorophyllide a + NADPH + H+ = monovinyl protochlorophyllide a + NADP+.","definition_xrefs":["MetaCyc:RXN1F-72"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3,8-divinyl protochlorophyllide a 8-vinyl reductase activity","secondary_identifiers":["RHEA:48884"],"termid":"GO:0051744"}


id: PBO:0062405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 29 pseudogene","termid":"PBO:0062405"}


id: PBO:0089203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit, Ran GTPase binding protein Gid1","termid":"PBO:0089203"}


id: PATO:0001107
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001107 density value (obsolete PATO:0001107)","termid":"PATO:0001107"}


id: PBO:0063880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class H pseudogene 1","termid":"PBO:0063880"}


id: MOD:00927
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces two hydrogen atoms of a residue containing common isotopes with two (13)C,3x(2)H labeled methyl groups to form a 2x(13)C,6x(2)H labeled dimethylated residue.","definition_xrefs":["PubMed:3802193","Unimod:510","PubMed:16335955"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"},{"relation_name":"is_a","term_name":"(13)C labeled residue","termid":"MOD:00842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2x(13)C,4x(2)H labeled dimethylated residue","synonyms":[{"name":"DiMethyl-C13HD2","type":"related"},{"name":"Dimethyl:2H(4)13C(2)","type":"related"}],"termid":"MOD:00927"}


id: PBO:0063854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p53 inducible cancer associated RNA transcript 1","termid":"PBO:0063854"}


id: GO:0019083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a viral genome, or part of a viral genome, is transcribed within the host cell.","definition_xrefs":["ISBN:0781702534","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral gene expression","termid":"GO:0019080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral transcription","termid":"GO:0019083"}


id: PBO:0085426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polo-like kinase essential for mitotic cell cycle; controls targeting, activation of Rho1p at cell division site via Rho1p guanine nucleotide exchange factors; regulates shape of nucleus, expansion of nuclear envelope during mitosis; implicated in cell divisions in telomerase-negative strains through adaptation to DNA damage, which allows bypass of cell cycle arrest and contributes senescence-specific genome instability; human homologs PLK1, PLK3 can each complement cdc5 thermosensitive mutants","termid":"PBO:0085426"}


id: PBO:0075014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-25","termid":"PBO:0075014"}


id: PBO:0045186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member B5 pseudogene 1","termid":"PBO:0045186"}


id: PBO:0080565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat and coiled coil containing","termid":"PBO:0080565"}


id: GO:1903063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of reverse cholesterol transport.","definition_xrefs":["GO_REF:0000058","PMID:23931754","GOC:rl","GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cholesterol transport","termid":"GO:0032375"},{"relation_name":"is_a","term_name":"regulation of reverse cholesterol transport","termid":"GO:1903062"},{"relation_name":"negatively_regulates","term_name":"reverse cholesterol transport","termid":"GO:0043691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of reverse cholesterol transport","synonyms":[{"name":"down regulation of reverse cholesterol transport","type":"exact"},{"name":"down-regulation of reverse cholesterol transport","type":"exact"},{"name":"downregulation of reverse cholesterol transport","type":"exact"},{"name":"inhibition of reverse cholesterol transport","type":"narrow"}],"termid":"GO:1903063"}


id: FYPO:0003338
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the actomyosin contractile ring is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton morphology during vegetative growth","termid":"FYPO:0000350"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring","termid":"FYPO:0004736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0004803","FYPO:0000002","FYPO:0001985","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"abnormal actomyosin contractile ring morphology","synonyms":[{"name":"abnormal actomyosin contractile ring morphology during mitotic cell cycle","type":"related"},{"name":"abnormal actomyosin contractile ring morphology during vegetative growth","type":"exact"},{"name":"abnormal contractile ring morphology","type":"exact"},{"name":"abnormal cytokinetic contractile ring morphology","type":"exact"},{"name":"abnormal mitotic contractile ring morphology","type":"exact"}],"termid":"FYPO:0003338"}


id: GO:0031543
data:
  {"annotated_genes":["SJAG_00642"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107779,107780],"is_not":false,"summary":null,"term":"GO:0031543"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl L-proline + 2-oxoglutarate + O2 = peptidyl hydroxy-L-proline + succinate + CO2.","definition_xrefs":["GOC:mah","GOC:vw","PMID:24550447","PMID:24550462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00642":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"peptidyl-proline dioxygenase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"proline hydroxylase activity","type":"broad"},{"name":"proline,2-oxoglutarate 4-dioxygenase activity","type":"broad"},{"name":"prolyl 4-hydroxylase activity","type":"broad"},{"name":"prolyl hydroxylase activity","type":"broad"}],"termid":"GO:0031543","terms_by_termid":{"GO:0031543":null}}


id: PBO:0071350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 8","termid":"PBO:0071350"}


id: GO:0033567
data:
  {"annotated_genes":["SJAG_02690","SJAG_05232","SJAG_04183","SJAG_00198","SJAG_02294","SJAG_00618","SJAG_02199"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88608,88696,96669,96705,100217,97560,91116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903461"}]},"cv_name":"biological_process","definition":"The DNA metabolic process, occurring during lagging strand synthesis, by which RNA primers are removed from Okazaki fragments, the resulting gaps filled by DNA polymerization, and the ends ligated to form a continuous strand.","definition_xrefs":["GOC:mah","ISBN:0716720094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"lagging strand elongation","termid":"GO:0006273"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_00618":null,"SJAG_02199":null,"SJAG_02294":null,"SJAG_02690":null,"SJAG_04183":null,"SJAG_05232":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"DNA replication, Okazaki fragment processing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033567","terms_by_termid":{"GO:1903461":null}}


id: PBO:0091343
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human RAD9","termid":"PBO:0091343"}


id: PBO:0075348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sclerostin","termid":"PBO:0075348"}


id: PBO:0016956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein New9","termid":"PBO:0016956"}


id: PBO:0005669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic aspartate-tRNA ligase Drs1 (predicted)","termid":"PBO:0005669"}


id: PBO:0108622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGBP1 pseudogene 5","termid":"PBO:0108622"}


id: PBO:0061127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuromedin B","termid":"PBO:0061127"}


id: GO:0075088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism activates, maintains or increases the frequency, rate or extent of the symbiont G protein-coupled receptor signal transduction. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont G protein-coupled receptor signal transduction (obsolete GO:0075088)","synonyms":[{"name":"positive regulation by host of symbiont G-protein coupled receptor protein signal transduction","type":"exact"}],"termid":"GO:0075088"}


id: PBO:0017989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine synthase Srm1 (predicted)","termid":"PBO:0017989"}


id: GO:0002541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process activating plasma proteins by proteolysis as part of an acute inflammatory response.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein processing","termid":"GO:0016485"},{"relation_name":"part_of","term_name":"acute inflammatory response","termid":"GO:0002526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"activation of plasma proteins involved in acute inflammatory response","termid":"GO:0002541"}


id: PBO:0017055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine-rich Schizosaccharomyces specific protein, predicted GPI anchor","termid":"PBO:0017055"}


id: FYPO:0004544
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of heterochromatin maintenance is longer than normal. Heterochromatin maintenance is the process that preserves heterochromatin in a stable functional or structural state.","definition_xrefs":["GO:0070829","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin organization during vegetative growth","termid":"FYPO:0004543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000641"],"is_obsolete":false,"name":"increased duration of heterochromatin maintenance","synonyms":[{"name":"increased duration of heterochromatin maintenance during mitotic cell cycle","type":"related"},{"name":"increased duration of heterochromatin maintenance during vegetative growth","type":"exact"},{"name":"prolonged heterochromatin maintenance","type":"exact"}],"termid":"FYPO:0004544"}


id: PBO:0061010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"niban apoptosis regulator 3","termid":"PBO:0061010"}


id: PBO:0110257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTREC associated protein Ctr1","termid":"PBO:0110257"}


id: PBO:0067974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 276","termid":"PBO:0067974"}


id: PBO:0061626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 9 pseudogene 1","termid":"PBO:0061626"}


id: PBO:0050000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone cell cycle regulator pseudogene 1","termid":"PBO:0050000"}


id: PBO:0061691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 210","termid":"PBO:0061691"}


id: PBO:0027149
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_threonine_level","termid":"PBO:0027149"}


id: GO:0033156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of oligogalacturonides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide transport","termid":"GO:0015772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"oligogalacturonide transport","termid":"GO:0033156"}


id: PR:Q9P5M9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug14 gene.","definition_xrefs":["UniProtKB:Q9P5M9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 14 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC359.06","synonyms":[{"name":"Spom972h-mug14","type":"exact"}],"termid":"PR:Q9P5M9"}


id: PBO:0011962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"other","termid":"PBO:0011962"}


id: GO:0047549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-nitrophenol + 2 H+ + 2 NADPH + O2 = catechol + H2O + 2 NADP+ + nitrite.","definition_xrefs":["EC:1.14.13.31","RHEA:19457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-nitrophenol 2-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R00828","MetaCyc:2-NITROPHENOL-2-MONOOXYGENASE-RXN","UM-BBD_reactionID:r1494"],"synonyms":[{"name":"2-nitrophenol oxygenase activity","type":"related"},{"name":"2-nitrophenol,NADPH:oxygen 2-oxidoreductase (2-hydroxylating, nitrite-forming)","type":"related"},{"name":"nitrophenol oxygenase activity","type":"broad"}],"termid":"GO:0047549"}


id: PBO:0051106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-24","termid":"PBO:0051106"}


id: PBO:0072988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium channel and clathrin linker 1","termid":"PBO:0072988"}


id: PBO:0002793
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.4","termid":"PBO:0002793"}


id: GO:0015383
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sulfate(out) + bicarbonate(in) = sulfate(in) + bicarbonate(out).","definition_xrefs":["TC:2.A.53.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:inorganic anion antiporter activity","termid":"GO:0005452"},{"relation_name":"is_a","term_name":"secondary active sulfate transmembrane transporter activity","termid":"GO:0008271"},{"relation_name":"is_a","term_name":"bicarbonate transmembrane transporter activity","termid":"GO:0015106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"sulfate:bicarbonate antiporter activity","synonyms":[{"name":"sulfate:hydrogencarbonate antiporter activity","type":"exact"},{"name":"sulphate:bicarbonate antiporter activity","type":"exact"}],"termid":"GO:0015383"}


id: SO:0000101
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transposon or insertion sequence. An element that can insert in a variety of DNA sequences.","direct_ancestors":[{"relation_name":"is_a","term_name":"integrated_mobile_genetic_element","termid":"SO:0001039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposable_element","secondary_identifiers":["http://en.wikipedia.org/wiki/Transposable_element"],"synonyms":[{"name":"transposable element","type":"exact"},{"name":"transposon","type":"exact"}],"termid":"SO:0000101"}


id: PBO:0030806
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_cell_cortex","termid":"PBO:0030806"}


id: PBO:0091866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small non-coding RNA snR48","termid":"PBO:0091866"}


id: PBO:0061559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NT5DC1 pseudogene 2","termid":"PBO:0061559"}


id: PBO:0068417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renalase, FAD dependent amine oxidase","termid":"PBO:0068417"}


id: PBO:0110243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT-binding factor complex histone fold subunit Php5","termid":"PBO:0110243"}


id: PBO:0077684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF superfamily member 13b","termid":"PBO:0077684"}


id: GO:0015741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of fumarate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4-dicarboxylate transport","termid":"GO:0015740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"fumarate transport","termid":"GO:0015741"}


id: GO:1905425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation.","definition_xrefs":["GOC:bf","GOC:TermGenie","GOC:PARL","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of Wnt-mediated midbrain dopaminergic neuron differentiation (obsolete GO:1905425)","synonyms":[{"name":"down regulation of Wg signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"down regulation of Wg signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"down regulation of Wg signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"down regulation of Wg signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"down regulation of Wg signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"down regulation of Wg signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"down regulation of Wg signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"down regulation of Wg signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"down regulation of Wg signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"down regulation of Wg signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"down regulation of Wingless signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"down regulation of Wingless signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"down regulation of Wingless signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"down regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"down regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"down regulation of Wingless signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"down regulation of Wingless signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"down regulation of Wingless signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"down regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"down regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"down regulation of Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"down regulation of Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"down regulation of Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"down regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"down regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"down regulation of Wnt receptor signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"down regulation of Wnt receptor signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"down regulation of Wnt receptor signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"down regulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"down regulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"down regulation of Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"down regulation of Wnt signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"down regulation of Wnt signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"down regulation of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"down regulation of Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"down regulation of Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"related"},{"name":"down regulation of Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"related"},{"name":"down regulation of Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"related"},{"name":"down regulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"related"},{"name":"down regulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"related"},{"name":"down regulation of Wnt-mediated midbrain DA neuron differentiation","type":"exact"},{"name":"down regulation of frizzled signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"down regulation of frizzled signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"down regulation of frizzled signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"down regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"down regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"down regulation of frizzled signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"down regulation of frizzled signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"down regulation of frizzled signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"down regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"down regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"down-regulation of Wg signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"down-regulation of Wg signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"down-regulation of Wg signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"down-regulation of Wg signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"down-regulation of Wg signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"down-regulation of Wg signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"down-regulation of Wg signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"down-regulation of Wg signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"down-regulation of Wg signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"down-regulation of Wg signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"down-regulation of Wingless signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"down-regulation of Wingless signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"down-regulation of Wingless signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"down-regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"down-regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"down-regulation of Wingless signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"down-regulation of Wingless signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"down-regulation of Wingless signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"down-regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"down-regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"down-regulation of Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"down-regulation of Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"down-regulation of Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"down-regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"down-regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"down-regulation of Wnt receptor signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"down-regulation of Wnt receptor signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"down-regulation of Wnt receptor signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"down-regulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"down-regulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"down-regulation of Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"down-regulation of Wnt signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"down-regulation of Wnt signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"down-regulation of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"down-regulation of Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"down-regulation of Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"related"},{"name":"down-regulation of Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"related"},{"name":"down-regulation of Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"related"},{"name":"down-regulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"related"},{"name":"down-regulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"related"},{"name":"down-regulation of Wnt-mediated midbrain DA neuron differentiation","type":"exact"},{"name":"down-regulation of frizzled signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"down-regulation of frizzled signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"down-regulation of frizzled signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"down-regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"down-regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"down-regulation of frizzled signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"down-regulation of frizzled signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"down-regulation of frizzled signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"down-regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"down-regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"downregulation of Wg signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"downregulation of Wg signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"downregulation of Wg signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"downregulation of Wg signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"downregulation of Wg signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"downregulation of Wg signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"downregulation of Wg signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"downregulation of Wg signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"downregulation of Wg signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"downregulation of Wg signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"downregulation of Wingless signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"downregulation of Wingless signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"downregulation of Wingless signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"downregulation of Wingless signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"downregulation of Wingless signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"downregulation of Wingless signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"downregulation of Wingless signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"downregulation of Wingless signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"downregulation of Wingless signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"downregulation of Wingless signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"downregulation of Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"downregulation of Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"downregulation of Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"downregulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"downregulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"downregulation of Wnt receptor signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"downregulation of Wnt receptor signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"downregulation of Wnt receptor signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"downregulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"downregulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"downregulation of Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"downregulation of Wnt signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"downregulation of Wnt signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"downregulation of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"downregulation of Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"downregulation of Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"related"},{"name":"downregulation of Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"related"},{"name":"downregulation of Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"related"},{"name":"downregulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"related"},{"name":"downregulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"related"},{"name":"downregulation of Wnt-mediated midbrain DA neuron differentiation","type":"exact"},{"name":"downregulation of frizzled signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"downregulation of frizzled signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"downregulation of frizzled signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"downregulation of frizzled signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"downregulation of frizzled signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"downregulation of frizzled signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"downregulation of frizzled signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"downregulation of frizzled signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"downregulation of frizzled signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"downregulation of frizzled signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"inhibition of Wg signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"inhibition of Wg signaling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"inhibition of Wg signaling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"inhibition of Wg signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"inhibition of Wg signaling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"inhibition of Wg signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"inhibition of Wg signalling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"inhibition of Wg signalling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"inhibition of Wg signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"inhibition of Wg signalling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"inhibition of Wingless signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"inhibition of Wingless signaling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"inhibition of Wingless signaling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"inhibition of Wingless signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"inhibition of Wingless signaling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"inhibition of Wingless signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"inhibition of Wingless signalling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"inhibition of Wingless signalling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"inhibition of Wingless signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"inhibition of Wingless signalling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"inhibition of Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"inhibition of Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"inhibition of Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"inhibition of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"inhibition of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"inhibition of Wnt receptor signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"inhibition of Wnt receptor signalling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"inhibition of Wnt receptor signalling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"inhibition of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"inhibition of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"inhibition of Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"inhibition of Wnt signaling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"inhibition of Wnt signaling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"inhibition of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"inhibition of Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"inhibition of Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"related"},{"name":"inhibition of Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"related"},{"name":"inhibition of Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"related"},{"name":"inhibition of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"related"},{"name":"inhibition of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"related"},{"name":"inhibition of Wnt-mediated midbrain DA neuron differentiation","type":"narrow"},{"name":"inhibition of frizzled signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"inhibition of frizzled signaling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"inhibition of frizzled signaling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"inhibition of frizzled signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"inhibition of frizzled signaling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"inhibition of frizzled signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"inhibition of frizzled signalling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"inhibition of frizzled signalling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"inhibition of frizzled signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"inhibition of frizzled signalling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"negative regulation of Wg signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"negative regulation of Wg signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"negative regulation of Wg signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"negative regulation of Wg signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"negative regulation of Wg signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"negative regulation of Wg signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"negative regulation of Wg signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"negative regulation of Wg signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"negative regulation of Wg signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"negative regulation of Wg signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"negative regulation of Wingless signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"negative regulation of Wingless signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"negative regulation of Wingless signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"negative regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"negative regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"negative regulation of Wingless signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"negative regulation of Wingless signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"negative regulation of Wingless signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"negative regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"negative regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"negative regulation of Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"negative regulation of Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"negative regulation of Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"negative regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"negative regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"negative regulation of Wnt receptor signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"negative regulation of Wnt receptor signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"negative regulation of Wnt receptor signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"negative regulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"negative regulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"negative regulation of Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"negative regulation of Wnt signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"negative regulation of Wnt signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"negative regulation of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"negative regulation of Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"negative regulation of Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"related"},{"name":"negative regulation of Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"related"},{"name":"negative regulation of Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"related"},{"name":"negative regulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"related"},{"name":"negative regulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"related"},{"name":"negative regulation of Wnt-mediated midbrain DA neuron differentiation","type":"exact"},{"name":"negative regulation of frizzled signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"negative regulation of frizzled signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"negative regulation of frizzled signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"negative regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"negative regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"negative regulation of frizzled signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"negative regulation of frizzled signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"negative regulation of frizzled signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"negative regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"negative regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"negative regulation of midbrain dopaminergic neuron differentiation by negative regulation of Wnt signaling","type":"related"}],"termid":"GO:1905425"}


id: GO:0006963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antibacterial peptide biosynthesis.","definition_xrefs":["GOC:mah","PMID:10973475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antibacterial peptide production","termid":"GO:0002803"},{"relation_name":"is_a","term_name":"positive regulation of antimicrobial peptide biosynthetic process","termid":"GO:0002807"},{"relation_name":"is_a","term_name":"regulation of antibacterial peptide biosynthetic process","termid":"GO:0002808"},{"relation_name":"positively_regulates","term_name":"antibacterial peptide biosynthetic process","termid":"GO:0002780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of antibacterial peptide biosynthetic process","synonyms":[{"name":"activation of antibacterial peptide biosynthetic process","type":"narrow"},{"name":"antibacterial peptide induction","type":"exact"},{"name":"antibacterial polypeptide induction","type":"exact"},{"name":"stimulation of antibacterial peptide biosynthetic process","type":"narrow"},{"name":"up regulation of antibacterial peptide biosynthetic process","type":"exact"},{"name":"up-regulation of antibacterial peptide biosynthetic process","type":"exact"},{"name":"upregulation of antibacterial peptide biosynthetic process","type":"exact"}],"termid":"GO:0006963"}


id: GO:0008775
data:
  {"annotated_genes":["SJAG_02985","SJAG_02769"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75520,87491],"is_not":false,"summary":null,"term":"GO:0008775"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + acetate = a fatty acid anion + acetyl-CoA.","definition_xrefs":["EC:2.8.3.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02769":null,"SJAG_02985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016782","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acetate CoA-transferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2066788","MetaCyc:ACECOATRANS-RXN","UM-BBD_enzymeID:r0012","RHEA:13381"],"synonyms":[{"name":"acetate coenzyme A-transferase activity","type":"related"},{"name":"acetyl-CoA:acetoacetate CoA transferase activity","type":"related"},{"name":"acyl-CoA:acetate CoA-transferase activity","type":"related"},{"name":"butyryl CoA:acetate CoA transferase activity","type":"related"},{"name":"butyryl coenzyme A transferase activity","type":"related"},{"name":"succinyl-CoA:acetate CoA transferase activity","type":"related"}],"termid":"GO:0008775","terms_by_termid":{"GO:0008775":null}}


id: GO:0061137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branch bud increases radially. A branch bud is the initial area of outgrowth in the formation of a new branch.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"morphogenesis of a branching structure","termid":"GO:0001763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bud dilation","termid":"GO:0061137"}


id: PBO:0029994
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_actomyosin_contractile_ring_disassembly","termid":"PBO:0029994"}


id: PBO:0080740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WWTR1 antisense RNA 1","termid":"PBO:0080740"}


id: PBO:0087060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L2A; homologous to mammalian ribosomal protein L2 and bacterial L2; RPL2A has a paralog, RPL2B, that arose from the whole genome duplication","termid":"PBO:0087060"}


id: GO:0043473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The accumulation of pigment in an organism, tissue or cell, either by increased deposition or by increased number of cells.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigmentation","termid":"GO:0043473"}


id: PBO:0039804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 1 pseudogene 2","termid":"PBO:0039804"}


id: PBO:0071961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 kinase A2","termid":"PBO:0071961"}


id: GO:0001779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a natural killer cell.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte differentiation","termid":"GO:0030098"},{"relation_name":"is_a","term_name":"natural killer cell activation","termid":"GO:0030101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell differentiation","synonyms":[{"name":"NK cell differentiation","type":"exact"},{"name":"natural killer cell development","type":"related"}],"termid":"GO:0001779"}


id: PBO:0034683
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_non-growing_cell_tip","termid":"PBO:0034683"}


id: PBO:0029183
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_trehalose_6-phosphate_level","termid":"PBO:0029183"}


id: PBO:0039565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 61","termid":"PBO:0039565"}


id: FYPO:0006632
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more free fatty acids measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:30003614","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular free fatty acid level","synonyms":[{"name":"normal cellular fatty acid level","type":"exact"},{"name":"normal cellular free fatty acid level during mitotic cell cycle","type":"related"},{"name":"normal cellular free fatty acid level during vegetative growth","type":"exact"},{"name":"normal level of free fatty acids in cell","type":"exact"}],"termid":"FYPO:0006632"}


id: GO:1903519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mammary gland involution.","definition_xrefs":["GO_REF:0000058","PMID:23164222","GOC:dph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tissue remodeling","termid":"GO:0034103"},{"relation_name":"regulates","term_name":"mammary gland involution","termid":"GO:0060056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mammary gland involution","termid":"GO:1903519"}


id: GO:1905457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lymphoid progenitor cell differentiation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:27010503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901533"},{"relation_name":"is_a","term_name":"regulation of lymphoid progenitor cell differentiation","termid":"GO:1905456"},{"relation_name":"negatively_regulates","term_name":"lymphoid progenitor cell differentiation","termid":"GO:0002320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lymphoid progenitor cell differentiation","synonyms":[{"name":"down regulation of lymphoid progenitor cell differentiation","type":"exact"},{"name":"down-regulation of lymphoid progenitor cell differentiation","type":"exact"},{"name":"downregulation of lymphoid progenitor cell differentiation","type":"exact"},{"name":"inhibition of lymphoid progenitor cell differentiation","type":"narrow"}],"termid":"GO:1905457"}


id: PBO:0005071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ria1 (predicted)","termid":"PBO:0005071"}


id: GO:1903496
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 11-deoxycorticosterone stimulus.","definition_xrefs":["GOC:TermGenie","GOC:mr","PMID:3585228","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mineralocorticoid","termid":"GO:0051385"},{"relation_name":"is_a","term_name":"response to alcohol","termid":"GO:0097305"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 11-deoxycorticosterone","termid":"GO:1903496"}


id: FYPO:0005326
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which error-prone translesion synthesis is normal (i.e. indistinguishable from wild type). Error-prone translesion synthesis a DNA repair process that results in the conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication.","definition_xrefs":["GO:0042276","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA repair","termid":"FYPO:0006569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal error-prone translesion synthesis","synonyms":[{"name":"normal error-prone translesion synthesis during mitotic cell cycle","type":"related"},{"name":"normal error-prone translesion synthesis during vegetative growth","type":"exact"}],"termid":"FYPO:0005326"}


id: PBO:0074097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 11","termid":"PBO:0074097"}


id: PBO:0046064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3J pseudogene 3","termid":"PBO:0046064"}


id: PBO:0028269
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_nitric_oxide_level_during_cellular_response_to_cadmium_ion","termid":"PBO:0028269"}


id: GO:0071588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of hydrogen peroxide (H2O2).","definition_xrefs":["GOC:mah","PMID:17043891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"hydrogen peroxide mediated signaling pathway","synonyms":[{"name":"H2O2 mediated signaling pathway","type":"exact"},{"name":"hydrogen peroxide mediated signalling pathway","type":"exact"}],"termid":"GO:0071588"}


id: PBO:0064697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 33","termid":"PBO:0064697"}


id: PBO:0109603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A5","termid":"PBO:0109603"}


id: GO:1902871
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of amacrine cell differentiation.","definition_xrefs":["PMID:16872597","GOC:mr","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neuron differentiation","termid":"GO:0045666"},{"relation_name":"is_a","term_name":"regulation of amacrine cell differentiation","termid":"GO:1902869"},{"relation_name":"positively_regulates","term_name":"amacrine cell differentiation","termid":"GO:0035881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amacrine cell differentiation","synonyms":[{"name":"activation of amacrine cell differentiation","type":"narrow"},{"name":"activation of amacrine neuron differentiation","type":"narrow"},{"name":"positive regulation of amacrine neuron differentiation","type":"exact"},{"name":"up regulation of amacrine cell differentiation","type":"exact"},{"name":"up regulation of amacrine neuron differentiation","type":"exact"},{"name":"up-regulation of amacrine cell differentiation","type":"exact"},{"name":"up-regulation of amacrine neuron differentiation","type":"exact"},{"name":"upregulation of amacrine cell differentiation","type":"exact"},{"name":"upregulation of amacrine neuron differentiation","type":"exact"}],"termid":"GO:1902871"}


id: PBO:0049741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit epsilon 1","termid":"PBO:0049741"}


id: SO:0000701
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence where the validity of the base calling is questionable.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_difference","termid":"SO:0000413"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible_base_call_error","synonyms":[{"name":"possible base call error","type":"exact"}],"termid":"SO:0000701"}


id: PBO:0029867
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K56_acetylation_in_transcribed_regions","termid":"PBO:0029867"}


id: GO:0061313
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands and contributing to the progression of the heart over time.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway involved in heart development","termid":"GO:0061311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in heart development","synonyms":[{"name":"fibroblast growth factor receptor signalling pathway involved in heart development","type":"exact"}],"termid":"GO:0061313"}


id: FYPO:0007072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through anaphase B of mitosis is shorter than normal. Anaphase B is the stage of mitosis in which the polar microtubules elongate and the two poles of the spindle move farther apart.","definition_xrefs":["GO:0000092","PomBase:mah","PMID:31427431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased duration of cell cycle phase","termid":"FYPO:0000410"},{"relation_name":"is_a","term_name":"abnormal mitotic anaphase progression","termid":"FYPO:0000616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"decreased duration of mitotic anaphase B","synonyms":[{"name":"decreased duration of anaphase B during mitotic cell cycle","type":"exact"},{"name":"decreased duration of mitotic anaphase B during vegetative growth","type":"exact"},{"name":"decreased duration of mitotic anaphase B progression","type":"exact"},{"name":"reduced duration of mitotic anaphase B","type":"exact"}],"termid":"FYPO:0007072"}


id: FYPO:0008163
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of nuclear foci are increased.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased number of nuclear foci","termid":"FYPO:0008163"}


id: GO:0003392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix that contributes to the process of retrograde extension.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion","termid":"GO:0007155"},{"relation_name":"part_of","term_name":"retrograde extension","termid":"GO:0003389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell adhesion involved in retrograde extension","termid":"GO:0003392"}


id: PBO:0002669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta-1-pyrroline-5-carboxylate reductase (predicted)","termid":"PBO:0002669"}


id: GO:0031052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Regulated cleavage of the developing macronuclear genome at a limited number of chromosome breakage sites (CBS). The macronuclear destined segment (MDS) sequence adjacent to the CBS (or separated from it by a BES) receives a macronuclear telomere following chromosome breakage.","definition_xrefs":["PMID:25303953","GOC:ns","PMID:15956677","PMID:32165395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed DNA elimination","termid":"GO:0031049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"programmed DNA elimination by chromosome breakage","synonyms":[{"name":"chromosome breakage","type":"related"}],"termid":"GO:0031052"}


id: GO:0042116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in morphology and behavior of a macrophage resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["PMID:14506301","GOC:mgi_curators","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte activation","termid":"GO:0002274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage activation","synonyms":[{"name":"macrophage polarization","type":"exact"}],"termid":"GO:0042116"}


id: GO:1903276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sodium ion export across the plasma membrane.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:TermGenie","GOC:rl","PMID:17095720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transport","termid":"GO:1902305"},{"relation_name":"regulates","term_name":"sodium ion export across plasma membrane","termid":"GO:0036376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of sodium ion export across plasma membrane","secondary_identifiers":["GO:1903273"],"synonyms":[{"name":"regulation of sodium export","type":"related"},{"name":"regulation of sodium ion export","type":"related"},{"name":"regulation of sodium ion export from cell","type":"exact"}],"termid":"GO:1903276"}


id: PBO:0050365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 68","termid":"PBO:0050365"}


id: PBO:0049156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 2A","termid":"PBO:0049156"}


id: GO:0046115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of guanine, guanine riboside, a nucleoside with a wide species distribution.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanosine metabolic process","termid":"GO:0008617"},{"relation_name":"is_a","term_name":"guanosine-containing compound catabolic process","termid":"GO:1901069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"guanosine catabolic process","secondary_identifiers":["GO:0006160"],"synonyms":[{"name":"guanosine breakdown","type":"exact"},{"name":"guanosine catabolism","type":"exact"},{"name":"guanosine degradation","type":"exact"},{"name":"guanosine phosphorolysis","type":"related"}],"termid":"GO:0046115"}


id: FYPO:0001718
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of malonic acid into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal malonic acid import","termid":"FYPO:0001717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased malonic acid import","synonyms":[{"name":"decreased malonate import","type":"related"},{"name":"decreased malonic acid import across plasma membrane","type":"exact"},{"name":"decreased malonic acid import during mitotic cell cycle","type":"related"},{"name":"decreased malonic acid import during vegetative growth","type":"exact"},{"name":"decreased malonic acid import into cell","type":"exact"},{"name":"decreased malonic acid uptake","type":"exact"},{"name":"reduced malonic acid import","type":"exact"}],"termid":"FYPO:0001718"}


id: GO:0016709
data:
  {"annotated_genes":["SJAG_03750","SJAG_00370","SJAG_04608"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004499"},{"annotations":[107872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004506"},{"annotations":[84544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008398"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from NADH or NADPH and one other donor, and one atom of oxygen is incorporated into one donor.","definition_xrefs":["EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00370":null,"SJAG_03750":null,"SJAG_04608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6786239","Reactome:R-HSA-2162187","Reactome:R-HSA-211951","Reactome:R-HSA-2162194"],"synonyms":[{"name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen","type":"related"}],"termid":"GO:0016709","terms_by_termid":{"GO:0004499":null,"GO:0004506":null,"GO:0008398":null}}


id: MOD:01230
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label -","definition_xrefs":["PubMed:15602776","Unimod:365#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, light form","termid":"MOD:00790"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, light form - site K","synonyms":[{"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, light form","type":"related"},{"name":"ICPL","type":"related"}],"termid":"MOD:01230"}


id: GO:0043424
data:
  {"annotated_genes":["SJAG_06592"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67799],"is_not":false,"summary":null,"term":"GO:0043424"}]},"cv_name":"molecular_function","definition":"Binding to a protein histidine kinase.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase binding","termid":"GO:0019901"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"protein histidine kinase binding","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"histidine kinase binding","type":"exact"},{"name":"histidine-protein kinase binding","type":"exact"},{"name":"protein-histidine kinase binding","type":"exact"}],"termid":"GO:0043424","terms_by_termid":{"GO:0043424":null}}


id: PBO:0036524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridylate kinase Ura6","termid":"PBO:0036524"}


id: GO:0044330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes involved in positive regulation of wound healing.","definition_xrefs":["GOC:BHF","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in positive regulation of wound healing (obsolete GO:0044330)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in positive regulation of wound healing","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in positive regulation of wound healing","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in positive regulation of wound healing","type":"exact"}],"termid":"GO:0044330"}


id: PBO:0034042
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_hemiplasy_relationship_with","termid":"PBO:0034042"}


id: PBO:0047854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(1)(q25.1)","termid":"PBO:0047854"}


id: PBO:0031052
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_trichostatin_A","termid":"PBO:0031052"}


id: PBO:0054363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1756","termid":"PBO:0054363"}


id: SO:1000045
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A ring chromosome is a chromosome whose arms have fused together to form a ring, often with the loss of the ends of the chromosome.","direct_ancestors":[{"relation_name":"has_quality","term_name":"circular","termid":"SO:0000988"},{"relation_name":"is_a","term_name":"intrachromosomal_mutation","termid":"SO:1000028"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring_chromosome","secondary_identifiers":["http://en.wikipedia.org/wiki/Ring_chromosome"],"synonyms":[{"name":"(Drosophila)R","type":"related"},{"name":"(fungi)C","type":"related"},{"name":"ring chromosome","type":"exact"}],"termid":"SO:1000045"}


id: GO:0102093
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acryloyl-CoA + H2O = acrylate + coenzyme A + H+.","definition_xrefs":["GOC:pz","EC:2.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016746"],"is_obsolete":false,"name":"acrylate:acyl-coA CoA transferase activity","secondary_identifiers":["MetaCyc:RXN-10985"],"termid":"GO:0102093"}


id: PATO:0002258
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a point.","definition_xrefs":["PATOC:http://www.merriam-webster.com/dictionary/pointed"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sharp","termid":"PATO:0001419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pointed","termid":"PATO:0002258"}


id: GO:0050236
data:
  {"annotated_genes":["SJAG_01543"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96933,110460],"is_not":false,"summary":null,"term":"GO:0050236"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + pyridoxine = H+ + NADPH + pyridoxal.","definition_xrefs":["EC:1.1.1.65","RHEA:16129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldo-keto reductase (NADPH) activity","termid":"GO:0004033"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01543":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"pyridoxine:NADP 4-dehydrogenase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PYRIDOXINE-4-DEHYDROGENASE-RXN","KEGG_REACTION:R01708"],"synonyms":[{"name":"PL reductase activity","type":"related"},{"name":"pyridoxal reductase activity","type":"related"},{"name":"pyridoxin dehydrogenase activity","type":"related"},{"name":"pyridoxine dehydrogenase activity","type":"related"},{"name":"pyridoxine:NADP 4-oxidoreductase activity","type":"related"},{"name":"pyridoxol dehydrogenase activity","type":"related"}],"termid":"GO:0050236","terms_by_termid":{"GO:0050236":null}}


id: PBO:0047752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyltransferase, CAAX box, alpha pseudogene 2","termid":"PBO:0047752"}


id: PBO:0077084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIFA inhibitor","termid":"PBO:0077084"}


id: GO:1905038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of membrane lipid metabolic process.","definition_xrefs":["GO_REF:0000058","PMID:25954280","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid metabolic process","termid":"GO:0019216"},{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"regulates","term_name":"membrane lipid metabolic process","termid":"GO:0006643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of membrane lipid metabolic process","synonyms":[{"name":"regulation of membrane lipid metabolism","type":"exact"}],"termid":"GO:1905038"}


id: FYPO:0004213
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the physical attachment of sister chromatids to mitotic spindle microtubules is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic chromosome congression","termid":"FYPO:0000030"},{"relation_name":"is_a","term_name":"abnormal attachment of spindle microtubules to kinetochore","termid":"FYPO:0000325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0000337","FYPO:0000641","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal attachment of mitotic spindle microtubules to kinetochore","synonyms":[{"name":"abnormal attachment of mitotic spindle microtubules to kinetochore during vegetative growth","type":"exact"},{"name":"abnormal attachment of spindle microtubules to kinetochore during mitosis","type":"exact"},{"name":"abnormal attachment of spindle microtubules to kinetochore during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004213"}


id: GO:1905059
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A calcium-transporting P-type ATPase activity involved in regulation of postsynaptic cytosolic calcium ion concentration.","definition_xrefs":["GO_REF:0000061","GOC:TermGenie","PMID:20678993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P-type calcium transporter activity","termid":"GO:0005388"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"P-type calcium transporter activity involved in regulation of postsynaptic cytosolic calcium ion concentration","synonyms":[{"name":"ATP phosphohydrolase (Ca2+-transporting) involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"ATPase-coupled calcium ion transmembrane transporter activity involved in regulation of postsynaptic cytosolic calcium levels","type":"exact"},{"name":"Ca(2+)-transporting ATPase activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"Ca2+-pumping ATPase activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"Ca2+-transporting ATPase activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"calcium ABC transporter involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"narrow"},{"name":"calcium efflux ATPase involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"narrow"},{"name":"calcium transporting ATPase activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"calcium-translocating P-type ATPase activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"narrow"},{"name":"calcium-transporting ATPase activity involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"exact"},{"name":"calcium-transporting ATPase activity involved in regulation of postsynaptic cytosolic calcium levels","type":"exact"},{"name":"plasma membrane Ca-ATPase involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"narrow"},{"name":"sarco(endo)plasmic reticulum Ca2+-ATPase involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"narrow"},{"name":"sarcoplasmic reticulum ATPase involved in regulation of postsynaptic cytosolic calcium ion concentration","type":"narrow"}],"termid":"GO:1905059"}


id: GO:0102784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: lutein + 2 O2 = 3-hydroxy-beta-ionone + 3-hydroxy-alpha-ionone + 4,9-dimethyldodeca-2,4,6,8,10-pentaenedial.","definition_xrefs":["EC:1.13.11.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"lutein oxygenase activity","secondary_identifiers":["MetaCyc:RXN-7884"],"termid":"GO:0102784"}


id: PBO:0039435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin and armadillo repeat containing","termid":"PBO:0039435"}


id: PBO:0108620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGBP1 pseudogene 3","termid":"PBO:0108620"}


id: PR:O74985
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- naa15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal acetyltransferase A complex subunit nat1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.07c","synonyms":[{"name":"NatA complex subunit nat1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-naa15","type":"exact"}],"termid":"PR:O74985"}


id: GO:0033073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the monoterpenoid pinene; alpha-pinene is (1S,5S)-2,6,6-trimethylbicyclo[3.1.1]hept-2-ene, and beta-pinene is (1S,5S)-6,6-dimethyl-2-methylenebicyclo[3.1.1]heptane.","definition_xrefs":["GOC:mah","PMID:12623076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpene metabolic process","termid":"GO:0043692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"pinene metabolic process","synonyms":[{"name":"pinene metabolism","type":"exact"}],"termid":"GO:0033073"}


id: PBO:0086926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pyruvate carboxylase isoform; cytoplasmic enzyme that converts pyruvate to oxaloacetate; differentially regulated than isoform Pyc2p; mutations in the human homolog are associated with lactic acidosis; PYC1 has a paralog, PYC2, that arose from the whole genome duplication","termid":"PBO:0086926"}


id: PR:Q9C0W8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- drp1 gene.","definition_xrefs":["UniProtKB:Q9C0W8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein tip20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC691.02c","synonyms":[{"name":"Spom972h-drp1","type":"exact"}],"termid":"PR:Q9C0W8"}


id: GO:1900467
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cellular potassium ion homeostasis.","definition_xrefs":["GOC:dgf","GOC:TermGenie","PMID:20412803"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular potassium ion homeostasis (obsolete GO:1900467)","synonyms":[{"name":"regulation of cellular potassium ion homeostasis","type":"exact"}],"termid":"GO:1900467"}


id: GO:0015530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of shikimate from one side of a membrane to the other. Shikimate is an important intermediate in the biosynthesis of aromatic amino acids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"organic hydroxy compound transmembrane transporter activity","termid":"GO:1901618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"shikimate transmembrane transporter activity","termid":"GO:0015530"}


id: GO:0044449
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a contractile fiber, a fiber composed of actin, myosin, and associated proteins, found in cells of smooth or striated muscle.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete contractile fiber part (obsolete GO:0044449)","synonyms":[{"name":"contractile fibre component","type":"exact"},{"name":"muscle fiber component","type":"broad"},{"name":"muscle fibre component","type":"broad"}],"termid":"GO:0044449"}


id: GO:0060264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a phase of elevated metabolic activity, during which oxygen consumption increases made as a defense response ; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals.","definition_xrefs":["GOC:rl","GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of innate immune response","termid":"GO:0045088"},{"relation_name":"is_a","term_name":"regulation of inflammatory response","termid":"GO:0050727"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"is_a","term_name":"regulation of respiratory burst","termid":"GO:0060263"},{"relation_name":"regulates","term_name":"respiratory burst involved in inflammatory response","termid":"GO:0002536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of respiratory burst involved in inflammatory response","synonyms":[{"name":"regulation of respiratory burst involved in acute inflammatory response","type":"broad"}],"termid":"GO:0060264"}


id: SO:0000056
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of chromosome variation where the chromosome complement is not an exact multiple of the haploid number as some chromosomes are missing.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aneuploid","termid":"SO:0000054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoploid","secondary_identifiers":["http://en.wikipedia.org/wiki/Hypoploid"],"termid":"SO:0000056"}


id: GO:0046848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to hydroxyapatite, the calcium phosphate mineral of formula Ca10(PO4)6(OH)2 found both in rocks of nonorganic origin and as a component of bone and dentin.","definition_xrefs":["PMID:2438276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"hydroxyapatite binding","synonyms":[{"name":"hydroxylapatite binding","type":"exact"}],"termid":"GO:0046848"}


id: GO:0048018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of a gene product that interacts with a receptor to effect a change in the activity of the receptor. Ligands may be produced by the same cell that expresses the receptor. Ligands may also be expressed at the plasma membrane of an adjacent cell (e.g. Notch ligands) or be secreted and diffuse extracellularly from their point of origin to the receiving cell (e.g. interleukins).","definition_xrefs":["GOC:molecular_function_refactoring","GOC:kv","GOC:pdt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"},{"relation_name":"is_a","term_name":"signaling receptor activator activity","termid":"GO:0030546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488","GO:0098772","GO:0140677"],"is_obsolete":false,"name":"receptor ligand activity","secondary_identifiers":["Reactome:R-HSA-381612","Reactome:R-HSA-163625","GO:0071884"],"synonyms":[{"name":"receptor agonist activity","type":"broad"},{"name":"signaling molecule","type":"exact"},{"name":"signaling receptor ligand activity","type":"exact"}],"termid":"GO:0048018"}


id: GO:0102301
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: malonyl-CoA + gamma-linolenoyl-CoA + H+ = (8Z,11Z,14Z)-3-oxoicosa-8,11,14-trienoyl-CoA + coenzyme A + carbon dioxide.","definition_xrefs":["GOC:pz","EC:2.3.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"gamma-linolenate elongase activity","secondary_identifiers":["MetaCyc:RXN-12777"],"termid":"GO:0102301"}


id: GO:2000156
data:
  {"annotated_genes":["SJAG_02419"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109689],"is_not":false,"summary":null,"term":"GO:2000156"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of retrograde vesicle-mediated transport, Golgi to ER.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"regulates","term_name":"retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum","termid":"GO:0006890"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02419":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"regulation of retrograde vesicle-mediated transport, Golgi to ER","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cis-Golgi to rough ER transport","type":"exact"},{"name":"regulation of cis-Golgi to rough ER vesicle-mediated transport","type":"exact"},{"name":"regulation of cis-Golgi to rough endoplasmic reticulum transport","type":"exact"},{"name":"regulation of cis-Golgi to rough endoplasmic reticulum vesicle-mediated transport","type":"exact"},{"name":"regulation of retrograde (Golgi to ER) transport","type":"exact"},{"name":"regulation of retrograde transport, Golgi to ER","type":"exact"},{"name":"regulation of retrograde transport, Golgi to endoplasmic reticulum","type":"exact"},{"name":"regulation of retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum","type":"related"}],"termid":"GO:2000156","terms_by_termid":{"GO:2000156":null}}


id: FYPO:0005739
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation results in the division of chromosomes into two distinct unequal masses containing unseparated sister chromatids, located at or near the ends of an elongated mitotic spindle.","definition_xrefs":["PMID:11792803","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complete but unequal mitotic sister chromatid segregation","termid":"FYPO:0001270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000337","FYPO:0001985","FYPO:0000641","FYPO:0000631","FYPO:0001320"],"is_obsolete":false,"name":"complete but unequal mitotic sister chromatid segregation with unseparated chromosomes","termid":"FYPO:0005739"}


id: GO:0044304
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The main axonal trunk, as opposed to the collaterals; i.e., excluding collaterals, terminal, spines, or dendrites.","definition_xrefs":["NIF_Subcellular:sao1596975044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"main axon","synonyms":[{"name":"axon shaft","type":"related"},{"name":"axon trunk","type":"exact"},{"name":"axonal shaft","type":"related"}],"termid":"GO:0044304"}


id: PBO:0111531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 228","termid":"PBO:0111531"}


id: PBO:0034054
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-continuous_with","termid":"PBO:0034054"}


id: PBO:0086150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for nuclear migration; component of the mitochondria-ER-cortex-anchor (MECA); required for the association of mitochondria with the cell cortex and for accurate distribution of mitochondrial network; interacts with Mdm36p to link the ER and mitochondria at the cortex; localizes to the mother cell cortex and the bud tip; may mediate interactions of dynein and cytoplasmic microtubules with the cell cortex","termid":"PBO:0086150"}


id: PBO:0018241
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"provides a telomeric cap that prevents Ku from recognising telomeres as double strand breaks (Ku-dependent end-to-end fusions)","termid":"PBO:0018241"}


id: GO:0051119
data:
  {"annotated_genes":["SJAG_03608","SJAG_03820","SJAG_00057"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005354"},{"annotations":[99049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015149"},{"annotations":[110245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140108"},{"annotations":[113288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a sugar from one side of a membrane to the other. A sugar is any member of a class of sweet, water-soluble, crystallizable carbohydrates, which are the monosaccharides and smaller oligosaccharides.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_03608":null,"SJAG_03820":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"sugar transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8875902","Reactome:R-HSA-8876319","Reactome:R-HSA-428779"],"synonyms":[{"name":"sugar/polyol channel activity","type":"narrow"}],"termid":"GO:0051119","terms_by_termid":{"GO:0005354":null,"GO:0005358":null,"GO:0015149":null,"GO:0140108":null}}


id: PBO:0081605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF528 antisense RNA 1","termid":"PBO:0081605"}


id: GO:1903674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cap-dependent translational initiation.","definition_xrefs":["GOC:bf","GOC:TermGenie","GO_REF:0000058","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational initiation","termid":"GO:1904688"},{"relation_name":"regulates","term_name":"cap-dependent translational initiation","termid":"GO:0002191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0002181","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of cap-dependent translational initiation","termid":"GO:1903674"}


id: PATO:0000433
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A parental quality inhering in a bearer by virtue of exhibiting the characteristic of a father.","definition_xrefs":["WordNet:WordNet"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000433 paternal (obsolete PATO:0000433)","termid":"PATO:0000433"}


id: GO:0000804
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The sex chromosome present in females of species in which the female is the heterogametic sex; generally, the sex chromosome that pairs with the Z chromosome in the heterogametic sex. The W chromosome is absent from the cells of males and present in one copy in the somatic cells of females.","definition_xrefs":["ISBN:0321000382","PMID:20622855","GOC:mr","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex chromosome","termid":"GO:0000803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"W chromosome","secondary_identifiers":["Wikipedia:ZW_sex-determination_system"],"termid":"GO:0000804"}


id: PBO:0047740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin type III domain containing 3C, pseudogene","termid":"PBO:0047740"}


id: PBO:0059229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L1","termid":"PBO:0059229"}


id: PBO:0026937
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_chromosome","termid":"PBO:0026937"}


id: PBO:0073663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SINHCAF pseudogene 3","termid":"PBO:0073663"}


id: FYPO:0003565
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins occurs to a greater extent than normal during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation","termid":"FYPO:0002680"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during meiotic cell cycle","termid":"FYPO:0006765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"increased protein phosphorylation during meiosis I","synonyms":[{"name":"increased protein phosphorylation during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003565"}


id: GO:0001320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) occurring in non-dividing cells as they age as a result of reactive oxygen species, where the change varies according to the age of the cell or organism.","definition_xrefs":["GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete age-dependent response to reactive oxygen species involved in chronological cell aging (obsolete GO:0001320)","synonyms":[{"name":"age-dependent response to AOS during chronological cell aging","type":"related"},{"name":"age-dependent response to ROI during chronological cell aging","type":"related"},{"name":"age-dependent response to ROS during chronological cell aging","type":"related"},{"name":"age-dependent response to active oxygen species during chronological cell aging","type":"related"},{"name":"age-dependent response to reactive oxidative species during chronological cell aging","type":"related"},{"name":"age-dependent response to reactive oxygen intermediate during chronological cell aging","type":"related"},{"name":"age-dependent response to reactive oxygen species during chronological cell ageing","type":"related"},{"name":"age-dependent response to reactive oxygen species during chronological cell aging","type":"related"}],"termid":"GO:0001320"}


id: GO:0071402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipoprotein particle stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stimulus","termid":"GO:0051716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to lipoprotein particle stimulus","termid":"GO:0071402"}


id: GO:0051133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of natural killer T cell activation.","definition_xrefs":["ISBN:0781735149","PMID:9133426","PMID:12154375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alpha-beta T cell activation","termid":"GO:0046634"},{"relation_name":"regulates","term_name":"NK T cell activation","termid":"GO:0051132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of NK T cell activation","synonyms":[{"name":"regulation of NK T lymphocyte activation","type":"exact"},{"name":"regulation of NK T-cell activation","type":"exact"},{"name":"regulation of NK T-lymphocyte activation","type":"exact"},{"name":"regulation of NKT cell activation","type":"exact"},{"name":"regulation of NT cell activation","type":"exact"},{"name":"regulation of natural T cell activation","type":"exact"},{"name":"regulation of natural killer T cell activation","type":"exact"}],"termid":"GO:0051133"}


id: PBO:0001137
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ncRNA in intron","termid":"PBO:0001137"}


id: PBO:0061201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOC2 like nucleolar associated transcriptional repressor pseudogene 1","termid":"PBO:0061201"}


id: GO:0035619
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The tip portion of an outgrowth of a root epidermal cell.","definition_xrefs":["PMID:16567499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell tip","termid":"GO:0051286"},{"relation_name":"part_of","term_name":"root hair","termid":"GO:0035618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"root hair tip","synonyms":[{"name":"root hair cell tip","type":"exact"}],"termid":"GO:0035619"}


id: GO:0018807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-hydroxycyclohex-1-ene-1-carboxyl-CoA + H2O = 2,6-dihydroxycyclohexane-1-carboxyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds","termid":"GO:0016822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"6-hydroxycyclohex-1-ene-1-carboxyl-CoA hydratase activity","secondary_identifiers":["RHEA:39651","EC:3.7.1.21"],"termid":"GO:0018807"}


id: PBO:0002169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TLDc domain protein 1","termid":"PBO:0002169"}


id: PBO:0041444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 open reading frame 85","termid":"PBO:0041444"}


id: GO:0001061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains a bacterial-type specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete bacterial-type RNA polymerase activity (obsolete GO:0001061)","termid":"GO:0001061"}


id: GO:0150144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of CD80 biosynthetic process.","definition_xrefs":["PMID:26936882","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glycoprotein biosynthetic process","termid":"GO:0010561"},{"relation_name":"is_a","term_name":"regulation of CD80 production","termid":"GO:0150143"},{"relation_name":"negatively_regulates","term_name":"CD80 biosynthetic process","termid":"GO:0035780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of CD80 production","synonyms":[{"name":"negative regulation of CD80 biosynthetic process","type":"exact"}],"termid":"GO:0150144"}


id: GO:1905182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of urease activity.","definition_xrefs":["PMID:16244137","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of urease activity (obsolete GO:1905182)","synonyms":[{"name":"activation of urea amidohydrolase activity","type":"narrow"},{"name":"activation of urease activity","type":"narrow"},{"name":"positive regulation of urea amidohydrolase activity","type":"exact"},{"name":"up regulation of urea amidohydrolase activity","type":"exact"},{"name":"up regulation of urease activity","type":"exact"},{"name":"up-regulation of urea amidohydrolase activity","type":"exact"},{"name":"up-regulation of urease activity","type":"exact"},{"name":"upregulation of urea amidohydrolase activity","type":"exact"},{"name":"upregulation of urease activity","type":"exact"}],"termid":"GO:1905182"}


id: GO:0002399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an MHC class II protein complex.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MHC protein complex assembly","termid":"GO:0002396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"MHC class II protein complex assembly","termid":"GO:0002399"}


id: PATO:0000492
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000492 absolute rhythym value (obsolete PATO:0000492)","termid":"PATO:0000492"}


id: GO:0060395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette that starts with the activation of a SMAD protein, leading to the formation of a complex with co-SMADs, which translocates to the nucleus and regulates transcription of specific target genes.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"},{"relation_name":"part_of","term_name":"cell surface receptor protein serine/threonine kinase signaling pathway","termid":"GO:0007178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"SMAD protein signal transduction","termid":"GO:0060395"}


id: GO:0032017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of Ran protein signal transduction.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Ran protein signal transduction (obsolete GO:0032017)","synonyms":[{"name":"activation of Ran protein signal transduction","type":"narrow"},{"name":"stimulation of Ran protein signal transduction","type":"narrow"},{"name":"up regulation of Ran protein signal transduction","type":"exact"},{"name":"up-regulation of Ran protein signal transduction","type":"exact"},{"name":"upregulation of Ran protein signal transduction","type":"exact"}],"termid":"GO:0032017"}


id: FYPO:0000660
data:
  {"alleles_by_uniquename":{"SJAG_01458:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01458","name":"acb1delta","uniquename":"SJAG_01458:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000719"}]},"cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate and other catalytic properties of a specified catalytic activity are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity phenotype","termid":"FYPO:0000654"},{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01458":null},"genotype_count":1,"genotypes_by_uniquename":{"acb1delta":{"display_name":"acb1delta","display_uniquename":"acb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01458:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal catalytic activity","references_by_uniquename":{"PMID:31956022":null},"single_locus_annotated_genes":["SJAG_01458"],"single_locus_genotype_uniquenames":["acb1delta"],"termid":"FYPO:0000660","terms_by_termid":{"FYECO:0000126":null,"FYPO:0000719":null}}


id: GO:0042758
data:
  {"annotated_genes":["SJAG_04570"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109826],"is_not":false,"summary":null,"term":"GO:0042758"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a long-chain fatty acid. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["PMID:20043225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"},{"relation_name":"is_a","term_name":"fatty acid catabolic process","termid":"GO:0009062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04570":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044248","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"long-chain fatty acid catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"long-chain fatty acid breakdown","type":"exact"},{"name":"long-chain fatty acid catabolism","type":"exact"},{"name":"long-chain fatty acid degradation","type":"exact"}],"termid":"GO:0042758","terms_by_termid":{"GO:0042758":null}}


id: PBO:0039454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 2","termid":"PBO:0039454"}


id: PBO:0017927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex, platform subcomplex scaffold subunit Apc15","termid":"PBO:0017927"}


id: GO:0010661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or frequency of muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a muscle cell and result in its death.","definition_xrefs":["GOC:mtg_apoptosis","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle cell apoptotic process","termid":"GO:0010660"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"positively_regulates","term_name":"muscle cell apoptotic process","termid":"GO:0010657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of muscle cell apoptotic process","synonyms":[{"name":"positive regulation of muscle cell apoptosis","type":"narrow"}],"termid":"GO:0010661"}


id: GO:0160145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of GDF15-GFRAL signaling pathway.","definition_xrefs":["PMID:35177851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"negatively_regulates","term_name":"GDF15-GFRAL signaling pathway","termid":"GO:0160144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of GDF15-GFRAL signaling pathway","termid":"GO:0160145"}


id: PBO:0036066
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_membrane_biogenesis_involved_in_mitosis","termid":"PBO:0036066"}


id: GO:0070371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A MAPK cascade containing at least the ERK1 or ERK2 MAP kinases. It starts with the activation of a MAP3K, and the consecutive activation of a MPK2K and of ERK1 or ERK2. The cascade can also contain an additional tier: the upstream MAP4K. The kinases in each tier phosphorylate and activate the kinase in the downstream tier. The ERK1/ERK2 cascade is activated by mitogens, growth factors, G protein-coupled receptors, and results in cellular responses such as cell proliferation, cell differentiation and development.","definition_xrefs":["PMID:20811974","PMID:23125017","PMID:28903453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MAPK cascade","termid":"GO:0000165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"ERK1 and ERK2 cascade","synonyms":[{"name":"ERK cascade","type":"broad"},{"name":"ERK1 and ERK2 signaling pathway","type":"exact"},{"name":"ERK1 and ERK2 signalling pathway","type":"exact"},{"name":"ERK1 cascade","type":"narrow"},{"name":"ERK1/2 cascade","type":"exact"},{"name":"ERK2 cascade","type":"narrow"},{"name":"MAPK1 cascade","type":"narrow"},{"name":"MAPK3 cascade","type":"narrow"},{"name":"extracellular signal-regulated kinase 1/2 (ERK1/2) cascade","type":"exact"},{"name":"extracellular signal-regulated kinase 1/2 cascade","type":"exact"}],"termid":"GO:0070371"}


id: GO:0006000
data:
  {"annotated_genes":["SJAG_04334","SJAG_02596","SJAG_03336","SJAG_00039","SJAG_02713"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85034,88913,90584,96003,97430],"is_not":false,"summary":null,"term":"GO:0006000"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving fructose, the ketohexose arabino-2-hexulose. Fructose exists in a open chain form or as a ring compound. D-fructose is the sweetest of the sugars and is found free in a large number of fruits and honey.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00039":null,"SJAG_02596":null,"SJAG_02713":null,"SJAG_03336":null,"SJAG_04334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"fructose metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Fructose"],"synonyms":[{"name":"fructose metabolism","type":"exact"}],"termid":"GO:0006000","terms_by_termid":{"GO:0006000":null}}


id: PBO:0047317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAT atypical cadherin 1 pseudogene 1","termid":"PBO:0047317"}


id: PBO:0075538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E18","termid":"PBO:0075538"}


id: PBO:0113162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inefficient homocysteine synthase; catalyzes de novo homocysteine biosynthesis; capable of catalyzing same reaction as Met17p; affects S-methylmethionine metabolism; similar to Str2p, which is a cystathionine gamma-synthase important in sulfur metabolism; HSU1 is not an essential gene","termid":"PBO:0113162"}


id: PBO:0049470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granzyme A","termid":"PBO:0049470"}


id: GO:0006882
data:
  {"annotated_genes":["SJAG_01078","SJAG_04584","SJAG_02080","SJAG_00328","SJAG_02847","SJAG_00222","SJAG_03528","SJAG_00923","SJAG_01990","SJAG_00668","SJAG_01803"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86505,89825,89826,90780,92250,96217,97285,98837,99639,100375,110407],"is_not":false,"summary":null,"term":"GO:0006882"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of zinc ions within a cell.","definition_xrefs":["GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00222":null,"SJAG_00328":null,"SJAG_00668":null,"SJAG_00923":null,"SJAG_01078":null,"SJAG_01803":null,"SJAG_01990":null,"SJAG_02080":null,"SJAG_02847":null,"SJAG_03528":null,"SJAG_04584":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"intracellular zinc ion homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cellular zinc ion homeostasis","type":"exact"},{"name":"zinc homeostasis","type":"broad"}],"termid":"GO:0006882","terms_by_termid":{"GO:0006882":null}}


id: MOD:00596
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 4-(2-aminoethyl)benzenesulfonyl fluoride, AEBS.","definition_xrefs":["PubMed:8597590","DeltaMass:235","Unimod:276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfonyl halide reagent derivatized residue","termid":"MOD:01652"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-(2-aminoethyl)benzenesulfonyl fluoride derivatized residue","synonyms":[{"name":"AEBS","type":"related"},{"name":"AEBSF","type":"exact"},{"name":"Aminoethylbenzenesulfonylation","type":"related"}],"termid":"MOD:00596"}


id: PBO:0079519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosinase","termid":"PBO:0079519"}


id: GO:0046987
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer, in a beta 1,3 linkage, of D-glucuronic acid (GlcUA) from UDP-D-glucuronic acid to N-acetyllactosamine (galactosyl beta-1,4-N-acetylglucosamine).","definition_xrefs":["PMID:12511570","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"N-acetyllactosamine beta-1,3-glucuronosyltransferase activity","synonyms":[{"name":"galactosyl beta-1,4 N-acetylglucosamine beta-1,3 glucuronosyltransferase activity","type":"exact"}],"termid":"GO:0046987"}


id: GO:0034571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4'-(2-hydroxyisopropyl)phenylurea + H2O = 4'-(2-hydroxyisopropyl)phenylaniline + carbamic acid.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4'-(2-hydroxyisopropyl)phenylurea amidohydrolase activity (obsolete GO:0034571)","termid":"GO:0034571"}


id: PBO:0003871
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.3.4","termid":"PBO:0003871"}


id: PBO:0024481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMPACT domain protein, possible chaperone (predicted)","termid":"PBO:0024481"}


id: FYPO:0008010
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of RNA-dependent RNA polymerase activity is decreased.","definition_xrefs":["PMID:15615848","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000654","FYPO:0000707"],"is_obsolete":false,"name":"decreased RNA-dependent RNA polymerase","termid":"FYPO:0008010"}


id: PR:O13952
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cnl2 gene.","definition_xrefs":["UniProtKB:O13952","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere-localized protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H4.11c","synonyms":[{"name":"Spom972h-cnl2","type":"exact"}],"termid":"PR:O13952"}


id: PBO:0038337
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_autoimmune_trigger","termid":"PBO:0038337"}


id: PBO:0047713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 4","termid":"PBO:0047713"}


id: PBO:0045252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal light chain 4","termid":"PBO:0045252"}


id: PBO:0077031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine synthase like 2","termid":"PBO:0077031"}


id: SO:1000132
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The effect of a change in nucleotide sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000132 sequence_variant_effect (obsolete SO:1000132)","synonyms":[{"name":"sequence variant effect","type":"related"}],"termid":"SO:1000132"}


id: PR:Q10302
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22H10.09 gene.","definition_xrefs":["UniProtKB:Q10302","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22H10.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.09","synonyms":[{"name":"Spom972h-SPAC22H10.09","type":"exact"}],"termid":"PR:Q10302"}


id: FYPO:0002880
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a lower extent than normal when the cell is subject to glucose starvation and oxidative stress simultaneously. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription during glucose starvation","termid":"FYPO:0003120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000294","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased transcription during glucose starvation and oxidative stress","synonyms":[{"name":"decreased transcription during cellular response to glucose starvation and oxidative stress","type":"exact"},{"name":"decreased transcription during glucose depletion and oxidative stress","type":"exact"},{"name":"decreased transcription during glucose deprivation and oxidative stress","type":"exact"},{"name":"decreased transcription during glucose limitation and oxidative stress","type":"exact"},{"name":"decreased transcription in response to glucose starvation and oxidative stress","type":"exact"},{"name":"decreased transcription in response to glucose starvation during oxidative stress","type":"exact"},{"name":"reduced transcription during glucose starvation and oxidative stress","type":"exact"}],"termid":"FYPO:0002880"}


id: PBO:0082527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall adhesin, expressed specifically during mating; may be involved in maintenance of cell wall integrity during mating; FIG2 has a paralog, AGA1, that arose from the whole genome duplication","termid":"PBO:0082527"}


id: PBO:0041254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 185","termid":"PBO:0041254"}


id: PBO:0088446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA exonuclease","termid":"PBO:0088446"}


id: FYPO:0003491
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ultraviolet light during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to UV during vegetative growth","termid":"FYPO:0000268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to UV during mitotic G1 phase","synonyms":[{"name":"decreased growth during cellular response to UV during mitotic G1 phase","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to UV during mitotic G1 phase","type":"exact"},{"name":"hypersensitive to UV during mitotic G1 phase","type":"exact"},{"name":"increased sensitivity to UV irradiation during mitotic G1 phase","type":"exact"},{"name":"sensitive to UV during G1 phase during vegetative growth","type":"exact"},{"name":"sensitive to UV during G1 phase of mitotic cell cycle","type":"exact"},{"name":"sensitive to ultraviolet light during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0003491"}


id: PBO:0011484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Dsc E3 ligase complex subunit Dsc1","termid":"PBO:0011484"}


id: GO:0042544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of melibiose, the disaccharide 6-O-alpha-D-galactopyranosyl-D-glucose.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melibiose metabolic process","termid":"GO:0005994"},{"relation_name":"is_a","term_name":"disaccharide biosynthetic process","termid":"GO:0046351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"melibiose biosynthetic process","synonyms":[{"name":"melibiose anabolism","type":"exact"},{"name":"melibiose biosynthesis","type":"exact"},{"name":"melibiose formation","type":"exact"},{"name":"melibiose synthesis","type":"exact"}],"termid":"GO:0042544"}


id: GO:0033120
data:
  {"annotated_genes":["SJAG_01040","SJAG_01919","SJAG_02018","SJAG_02058","SJAG_00996"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"},{"annotations":[88206,74286,72914,106981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048026"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of RNA splicing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"regulation of RNA splicing","termid":"GO:0043484"},{"relation_name":"positively_regulates","term_name":"RNA splicing","termid":"GO:0008380"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00996":null,"SJAG_01040":null,"SJAG_01919":null,"SJAG_02018":null,"SJAG_02058":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of RNA splicing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0033120","terms_by_termid":{"GO:0048026":null,"GO:1905746":null}}


id: PBO:0042202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin G2","termid":"PBO:0042202"}


id: PBO:0030111
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_ethionine","termid":"PBO:0030111"}


id: GO:1990604
data:
  {"annotated_genes":["SJAG_04435"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[85581],"is_not":false,"summary":null,"term":"GO:1990604"}]},"cv_name":"cellular_component","definition":"A protein complex of the endoplasmic reticulum membrane that consists of IRE1 (Inositol-requiring enzyme-1), TRAF2 (TNF receptor-associated factor 2) and ASK1 (Apoptosis signal-regulating kinase 1, a MAP3K).","definition_xrefs":["GOC:PARL","PMID:12050113","PMID:23000344","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04435":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005783","GO:0005575","GO:0005789","GO:0032991"],"is_obsolete":false,"name":"IRE1-TRAF2-ASK1 complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ERN1-TRAF2-ASK1 complex","type":"related"}],"termid":"GO:1990604","terms_by_termid":{"GO:1990604":null}}


id: PBO:0028010
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiotic_telomere_clustering","termid":"PBO:0028010"}


id: GO:0010910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency or extent of heparan sulfate proteoglycan biosynthesis by an increase in epimerase activity. This epimerase activity catalyzes the reaction that converts D-glucuronate into its diastereoisomer in heparan sulfate.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of heparan sulfate proteoglycan biosynthesis by positive regulation of epimerase activity (obsolete GO:0010910)","termid":"GO:0010910"}


id: GO:0140293
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (ADP-D-ribosyl)-L-glutamyl-[protein] + H2O = L-glutamyl-[protein] + ADP-ribose.","definition_xrefs":["PMID:23481255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0140096","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ADP-ribosylglutamate hydrolase activity","termid":"GO:0140293"}


id: PBO:0040559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B3GNTL1 pseudogene 2","termid":"PBO:0040559"}


id: GO:0003048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by the catecholamine signaling molecule norepinephrine.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure mediated by a chemical signal","termid":"GO:0003044"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by norepinephrine-epinephrine","termid":"GO:0001993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by norepinephrine","synonyms":[{"name":"blood pressure regulation by norepinephrine","type":"related"},{"name":"regulation of blood pressure by noradrenaline","type":"exact"}],"termid":"GO:0003048"}


id: PR:O74814
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A regulation of nuclear pre-mRNA domain-containing protein 1A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0400 protein C337.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.03","secondary_identifiers":["UniProtKB:O74814"],"synonyms":[{"name":"Spom972h-RPRD1A","type":"exact"}],"termid":"PR:O74814"}


id: GO:0030925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of calcium into a metallo-oxygen cluster.","definition_xrefs":["GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium incorporation into metallo-oxygen cluster (obsolete GO:0030925)","termid":"GO:0030925"}


id: MOD:00556
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["Unimod:205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrolein addition +94","synonyms":[{"name":"Acrolein addition +94","type":"related"},{"name":"Delta:H(6)C(6)O(1)","type":"related"}],"termid":"MOD:00556"}


id: PBO:0001970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARP2/3 actin-organizing complex subunit Arc4","termid":"PBO:0001970"}


id: GO:0016884
data:
  {"annotated_genes":["SJAG_01577","SJAG_00412","SJAG_02832","SJAG_00392","SJAG_02721","SJAG_04634","SJAG_00964","SJAG_03355","SJAG_04549","SJAG_05560","SJAG_02618"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98227,106852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004066"},{"annotations":[107140,102566,89475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004088"},{"annotations":[92726,107352,114464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050567"},{"annotations":[89477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003922"},{"annotations":[97253],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0003921"},{"annotations":[113379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003952"},{"annotations":[95633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004642"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of the amide nitrogen of glutamine to a substrate. Usually composed of two subunits or domains, one that first hydrolyzes glutamine, and then transfers the resulting ammonia to the second subunit (or domain), where it acts as a source of nitrogen.","definition_xrefs":["PMID:12360532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00392":null,"SJAG_00412":null,"SJAG_00964":null,"SJAG_01577":null,"SJAG_02618":null,"SJAG_02721":null,"SJAG_02832":null,"SJAG_03355":null,"SJAG_04549":null,"SJAG_04634":null,"SJAG_05560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:6.3.5.-","GO:0016003"],"termid":"GO:0016884","terms_by_termid":{"GO:0003921":null,"GO:0003922":null,"GO:0003952":null,"GO:0004066":null,"GO:0004088":null,"GO:0004642":null,"GO:0050567":null}}


id: PBO:0065382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 9","termid":"PBO:0065382"}


id: PATO:0000212
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000212 neural function (obsolete PATO:0000212)","termid":"PATO:0000212"}


id: PBO:0042310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD24 molecule pseudogene 4","termid":"PBO:0042310"}


id: PBO:0074596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 9","termid":"PBO:0074596"}


id: GO:0015465
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. An agent that can lyse cells.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete lysin activity (obsolete GO:0015465)","synonyms":[{"name":"lysin activity","type":"exact"}],"termid":"GO:0015465"}


id: GO:0019149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-chloro-D-alanine + H2O = pyruvate + chloride + NH3.","definition_xrefs":["EC:4.5.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-halide lyase activity","termid":"GO:0016848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-chloro-D-alanine dehydrochlorinase activity","secondary_identifiers":["MetaCyc:3-CHLORO-D-ALANINE-DEHYDROCHLORINASE-RXN","RHEA:18873"],"synonyms":[{"name":"3-chloro-D-alanine chloride-lyase (deaminating)","type":"related"},{"name":"3-chloro-D-alanine chloride-lyase (deaminating; pyruvate-forming)","type":"related"},{"name":"beta-chloro-D-alanine dehydrochlorinase activity","type":"related"}],"termid":"GO:0019149"}


id: GO:0047025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + OH-acyl-[acyl-carrier protein] = NADH + H+ + B-ketoacyl-[acyl-carrier protein].","definition_xrefs":["MetaCyc:1.1.1.212-RXN","EC:1.1.1.212"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein] reductase (NADH) activity","secondary_identifiers":["RHEA:19913"],"synonyms":[{"name":"(3R)-3-hydroxyacyl-acyl-carrier-protein:NAD+ oxidoreductase activity","type":"related"},{"name":"3-oxoacyl-ACP reductase (NADH) activity","type":"exact"},{"name":"3-oxoacyl-[acyl-carrier protein] reductase (NADH) activity","type":"exact"},{"name":"3-oxoacyl-acyl carrier protein (reduced nicotinamide adenine dinucleotide) reductase activity","type":"related"},{"name":"3-oxoacyl-acyl-carrier-protein reductase (NADH)","type":"related"}],"termid":"GO:0047025"}


id: GO:0072137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a condensed mesenchymal cell population. A condensed mesenchymal cell population is a population of adherent mesenchymal cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"condensed mesenchymal cell proliferation","termid":"GO:0072137"}


id: PBO:0040617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 antagonist/killer 1 pseudogene 2","termid":"PBO:0040617"}


id: PBO:0089851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS complex subunit Pcc1","termid":"PBO:0089851"}


id: PBO:0061444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NR2F2 antisense RNA 1","termid":"PBO:0061444"}


id: GO:2000996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellodextrin metabolic process","termid":"GO:2000926"},{"relation_name":"is_a","term_name":"positive regulation of cell wall polysaccharide catabolic process","termid":"GO:2000968"},{"relation_name":"is_a","term_name":"regulation of mannan catabolic process","termid":"GO:2000994"},{"relation_name":"positively_regulates","term_name":"mannan catabolic process","termid":"GO:0046355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mannan catabolic process","synonyms":[{"name":"positive regulation of mannan breakdown","type":"exact"},{"name":"positive regulation of mannan catabolism","type":"exact"},{"name":"positive regulation of mannan degradation","type":"exact"}],"termid":"GO:2000996"}


id: PBO:0064039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 73","termid":"PBO:0064039"}


id: PBO:0091985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf22 (frameshifted)","termid":"PBO:0091985"}


id: GO:1900821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of orlandin.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"orlandin metabolic process","termid":"GO:1900819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"orlandin biosynthetic process","synonyms":[{"name":"orlandin anabolism","type":"exact"},{"name":"orlandin biosynthesis","type":"exact"},{"name":"orlandin formation","type":"exact"},{"name":"orlandin synthesis","type":"exact"}],"termid":"GO:1900821"}


id: PBO:0042303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD14 molecule","termid":"PBO:0042303"}


id: PBO:0054448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1845","termid":"PBO:0054448"}


id: GO:1904556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-tryptophan across a membrane.","definition_xrefs":["GOC:TermGenie","GO_REF:0000069","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tryptophan transport","termid":"GO:0015827"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"L-tryptophan transmembrane transport","termid":"GO:1904556"}


id: GO:1904132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of convergent extension involved in neural plate elongation.","definition_xrefs":["PMID:24892953","GOC:dph","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of convergent extension involved in gastrulation","termid":"GO:1904105"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in neural plate elongation","termid":"GO:1904130"},{"relation_name":"positively_regulates","term_name":"convergent extension involved in neural plate elongation","termid":"GO:0022007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of convergent extension involved in neural plate elongation","synonyms":[{"name":"activation of convergent extension involved in neural plate elongation","type":"narrow"},{"name":"up regulation of convergent extension involved in neural plate elongation","type":"exact"},{"name":"up-regulation of convergent extension involved in neural plate elongation","type":"exact"},{"name":"upregulation of convergent extension involved in neural plate elongation","type":"exact"}],"termid":"GO:1904132"}


id: GO:0090692
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The site on the mitochondrial membrane where the separation of a single continuous mitochondrial membrane into two membranes occurs as a final step in mitochondrial fission.","definition_xrefs":["GOC:bc","GOC:PARL","PMID:26618722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitochondrial membrane","termid":"GO:0031966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0005737"],"is_obsolete":false,"name":"mitochondrial membrane scission site","termid":"GO:0090692"}


id: PR:O60179
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- utp10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23E6.04c","synonyms":[{"name":"Spom972h-utp10","type":"exact"},{"name":"U3 protein 10 required for transcription (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60179"}


id: PBO:0076798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor, mitochondrial","termid":"PBO:0076798"}


id: GO:1903566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to cilium.","definition_xrefs":["GOC:cilia","PMID:22072986","GO_REF:0000058","GOC:krc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cilium","termid":"GO:1903564"},{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"positively_regulates","term_name":"protein localization to cilium","termid":"GO:0061512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to cilium","synonyms":[{"name":"activation of protein localization to cilium","type":"narrow"},{"name":"up regulation of protein localization to cilium","type":"exact"},{"name":"up-regulation of protein localization to cilium","type":"exact"},{"name":"upregulation of protein localization to cilium","type":"exact"}],"termid":"GO:1903566"}


id: GO:0097018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A renal system process in which albumin is taken up from the collecting ducts, glomerulus and proximal and distal loops of the nephron.","definition_xrefs":["PMID:18431508","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal protein absorption","termid":"GO:0097017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal albumin absorption","termid":"GO:0097018"}


id: PBO:0089405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translational activator, zf-CCHC type zinc finger protein","termid":"PBO:0089405"}


id: PBO:0046923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 41 member A, Y-linked 2","termid":"PBO:0046923"}


id: PBO:0029327
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H2A_phosphorylation_during_mitotic_S_phase","termid":"PBO:0029327"}


id: GO:0043067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of programmed cell death, cell death resulting from activation of endogenous cellular processes.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"programmed cell death","termid":"GO:0012501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of programmed cell death","secondary_identifiers":["GO:0043070"],"synonyms":[{"name":"regulation of non-apoptotic programmed cell death","type":"narrow"}],"termid":"GO:0043067"}


id: GO:0002665
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of T cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tolerance induction","termid":"GO:0002644"},{"relation_name":"is_a","term_name":"regulation of T cell tolerance induction","termid":"GO:0002664"},{"relation_name":"negatively_regulates","term_name":"T cell tolerance induction","termid":"GO:0002517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell tolerance induction","synonyms":[{"name":"down regulation of T cell tolerance induction","type":"exact"},{"name":"down-regulation of T cell tolerance induction","type":"exact"},{"name":"downregulation of T cell tolerance induction","type":"exact"},{"name":"inhibition of T cell tolerance induction","type":"narrow"},{"name":"negative regulation of T lymphocyte tolerance induction","type":"exact"},{"name":"negative regulation of T-cell tolerance induction","type":"exact"},{"name":"negative regulation of T-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002665"}


id: PATO:0000965
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pattern quality of inhering in a bearer by virtue of the correspondence in size, shape, and relative position of the bearer's parts on opposite sides of a dividing line or median plane or about a center or axis.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regular spatial pattern","termid":"PATO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symmetry","termid":"PATO:0000965"}


id: GO:0001632
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with leukotriene B4, LTB4, to initiate a change in cell activity. Leukotriene B4 is also known as (6Z, 8E, 10E, 14Z)-(5S, 12R)-5,12-dihydroxyicosa-6,8,10,14-tetraen-1-oate.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene receptor activity","termid":"GO:0004974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"leukotriene B4 receptor activity","synonyms":[{"name":"BLT receptor","type":"narrow"}],"termid":"GO:0001632"}


id: PR:Q10271
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arb2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argonaute-binding protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.07","synonyms":[{"name":"Spom972h-arb2","type":"exact"}],"termid":"PR:Q10271"}


id: GO:0030551
data:
  {"annotated_genes":["SJAG_01245"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[96503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030552"}]},"cv_name":"molecular_function","definition":"Binding to a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide binding","termid":"GO:0000166"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01245":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cyclic nucleotide binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030551","terms_by_termid":{"GO:0030552":null}}


id: PBO:0067237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 308, pseudogene","termid":"PBO:0067237"}


id: GO:0050787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduce or remove the toxicity of mercuric ion. These include transport of mercury away from sensitive areas and to compartments or complexes whose purpose is sequestration of mercury ion and/or reduction of mercury ion (Hg[II]) to metallic mercury (Hg[0]).","definition_xrefs":["PMID:10774920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of inorganic compound","termid":"GO:0061687"},{"relation_name":"part_of","term_name":"response to mercury ion","termid":"GO:0046689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"detoxification of mercury ion","termid":"GO:0050787"}


id: PBO:0001045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent protein Srb mediator subunit kinase Srb10","termid":"PBO:0001045"}


id: PBO:0053137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine decarboxylase 1, pseudogene","termid":"PBO:0053137"}


id: GO:0140781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ilicicolin H, a 4-hydroxy-2-pyridone alkaloid that has potent and broad antifungal activities by inhibiting the mitochondrial respiration chain.","definition_xrefs":["PMID:34947016","PMID:30905148","PMID:31216742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid biosynthetic process","termid":"GO:0009821"},{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"pyridine-containing compound biosynthetic process","termid":"GO:0072525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"ilicicolin H biosynthetic process","synonyms":[{"name":"ilicicolin H anabolism","type":"exact"},{"name":"ilicicolin H biosynthesis","type":"exact"},{"name":"ilicicolin H formation","type":"exact"},{"name":"ilicicolin H synthesis","type":"exact"}],"termid":"GO:0140781"}


id: GO:0140211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: folic acid(out) + H+(out) = folic acid(in) + H+(in). The main folic acid symporter is the Proton-Coupled Folate Transporter (PCFT/SLC46A1), which has similar affinity for transport of reduced folates (5-methyl THF, 5-formyl THF) and folic acid.","definition_xrefs":["PMID:24745983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid transmembrane transporter activity","termid":"GO:0008517"},{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"folic acid:proton symporter activity","secondary_identifiers":["TC:2.A.1.50.1"],"termid":"GO:0140211"}


id: FYPO:0003952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, begins later than normal during a cellular response to oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of protein phosphorylation during vegetative growth","termid":"FYPO:0002830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"delayed onset of protein phosphorylation during cellular response to oxidative stress","synonyms":[{"name":"delayed onset of protein phosphorylation during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein phosphorylation during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"delayed onset of protein phosphorylation during oxidative stress response","type":"exact"},{"name":"delayed onset of protein/peptide phosphorylation during cellular response to oxidative stress","type":"exact"},{"name":"delayed protein phosphorylation during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0003952"}


id: SO:0001201
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A positive_sense_RNA_viral_sequence is a ss_RNA_viral_sequence that is the sequence of a single stranded RNA virus that can be immediately translated by the host.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ss_RNA_viral_sequence","termid":"SO:0001199"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"positive_sense_ssRNA_viral_sequence","synonyms":[{"name":"positive sense single stranded RNA virus","type":"related"},{"name":"positive sense ssRNA viral sequence","type":"exact"}],"termid":"SO:0001201"}


id: PR:Q9UUB8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NFU1 iron-sulfur cluster scaffold, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11178:SF0","OMA:SCHPO02733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NifU-like protein C1709.19c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.19c","secondary_identifiers":["UniProtKB:Q9UUB8"],"synonyms":[{"name":"Spom972h-NFU1","type":"exact"}],"termid":"PR:Q9UUB8"}


id: PBO:0029992
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_thiamine_starvation","termid":"PBO:0029992"}


id: GO:0008331
data:
  {"annotated_genes":["SJAG_05229"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95690],"is_not":false,"summary":null,"term":"GO:0008331"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a high voltage-gated channel. A high voltage-gated channel is a channel whose open state is dependent on high voltage across the membrane in which it is embedded.","definition_xrefs":["PMID:16382099","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity","termid":"GO:0005245"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"high voltage-gated calcium channel activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-type calcium channel","type":"related"},{"name":"N-type calcium channel","type":"related"},{"name":"P-type calcium channel","type":"related"},{"name":"Q-type calcium channel","type":"related"},{"name":"high voltage gated calcium channel activity","type":"exact"},{"name":"high voltage-dependent calcium channel activity","type":"exact"}],"termid":"GO:0008331","terms_by_termid":{"GO:0008331":null}}


id: PBO:0003870
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Menkes/Wilson disease","termid":"PBO:0003870"}


id: FYPO:0001298
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of palmitoyl-CoA ligase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal palmitoyl-CoA ligase activity","termid":"FYPO:0001297"},{"relation_name":"is_a","term_name":"decreased long-chain fatty acid-CoA ligase activity","termid":"FYPO:0001307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"decreased palmitoyl-CoA ligase activity","synonyms":[{"name":"decreased palmitoyl-CoA synthetase activity","type":"exact"},{"name":"reduced palmitoyl-CoA ligase activity","type":"exact"}],"termid":"FYPO:0001298"}


id: PBO:0068674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 55, pseudogene","termid":"PBO:0068674"}


id: RO:0002014
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a GO molecular function and a component of that molecular function that negatively regulates the activity of the whole.  More formally, A 'has regulatory component activity' B iff :A and B are GO molecular functions (GO_0003674), A has_component B and A is negatively regulated by B.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_regulatory_component_activity","termid":"RO:0002013"},{"relation_name":"is_a","term_name":"negatively_regulated_by","termid":"RO:0002335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_negative_regulatory_component_activity","termid":"RO:0002014"}


id: GO:0098935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of organelles or molecules along microtubules in dendrites.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axo-dendritic transport","termid":"GO:0008088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"dendritic transport","synonyms":[{"name":"dendrite cargo transport","type":"exact"}],"termid":"GO:0098935"}


id: GO:0003196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the ventriculo bulbo valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve formation","termid":"GO:0003188"},{"relation_name":"part_of","term_name":"ventriculo bulbo valve morphogenesis","termid":"GO:0003187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventriculo bulbo valve formation","termid":"GO:0003196"}


id: PBO:0046468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erb-b2 receptor tyrosine kinase 2","termid":"PBO:0046468"}


id: GO:0070200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein to a specific location in the telomeric region of a chromosome.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromosome, telomeric region","termid":"GO:0070198"},{"relation_name":"is_a","term_name":"establishment of protein localization to chromosome","termid":"GO:0070199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of protein localization to telomere","synonyms":[{"name":"establishment of protein localisation to telomere","type":"exact"},{"name":"establishment of protein localization to chromosome, telomeric region","type":"exact"}],"termid":"GO:0070200"}


id: SO:0000391
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"U1 is a small nuclear RNA (snRNA) component of the spliceosome (involved in pre-mRNA splicing). Its 5' end forms complementary base pairs with the 5' splice junction, thus defining the 5' donor site of an intron. There are significant differences in sequence and secondary structure between metazoan and yeast U1 snRNAs, the latter being much longer (568 nucleotides as compared to 164 nucleotides in human). Nevertheless, secondary structure predictions suggest that all U1 snRNAs share a 'common core' consisting of helices I, II, the proximal region of III, and IV.","direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1_snRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/U1_snRNA"],"synonyms":[{"name":"U1 small nuclear RNA","type":"exact"},{"name":"U1 snRNA","type":"exact"},{"name":"small nuclear RNA U1","type":"exact"},{"name":"snRNA U1","type":"exact"}],"termid":"SO:0000391"}


id: PBO:0036513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KH and CC/hC domain splicing factor Bpb1","termid":"PBO:0036513"}


id: GO:0003729
data:
  {"annotated_genes":["SJAG_02243","SJAG_05322","SJAG_04405","SJAG_01717","SJAG_02554","SJAG_03696","SJAG_02722","SJAG_00324","SJAG_05003","SJAG_03674","SJAG_03853","SJAG_03283","SJAG_02037","SJAG_04919","SJAG_04022","SJAG_01650","SJAG_04818","SJAG_02381","SJAG_02043","SJAG_04480","SJAG_01469","SJAG_01919","SJAG_04310","SJAG_03176","SJAG_04084","SJAG_02622","SJAG_01222","SJAG_03157","SJAG_00147","SJAG_02239","SJAG_04230","SJAG_05010","SJAG_04738","SJAG_04682","SJAG_03113","SJAG_01954","SJAG_00425","SJAG_04160","SJAG_04385","SJAG_01819","SJAG_00749","SJAG_05009","SJAG_01529","SJAG_04081","SJAG_04163","SJAG_00338","SJAG_01249","SJAG_03533","SJAG_00249","SJAG_00474","SJAG_02829","SJAG_05218","SJAG_00713","SJAG_02663","SJAG_03498","SJAG_04427","SJAG_01317","SJAG_04772","SJAG_02879","SJAG_04946","SJAG_03594","SJAG_04214","SJAG_04589","SJAG_04056","SJAG_03995","SJAG_00833","SJAG_00523","SJAG_00759","SJAG_01412","SJAG_00513","SJAG_03922","SJAG_01301","SJAG_02097","SJAG_00992","SJAG_03214","SJAG_00563","SJAG_01852","SJAG_03983","SJAG_02894","SJAG_04880","SJAG_04407","SJAG_04271","SJAG_03788","SJAG_02036","SJAG_02573","SJAG_04360","SJAG_01015","SJAG_02207","SJAG_01882","SJAG_00686","SJAG_04686","SJAG_04640","SJAG_01843","SJAG_01988","SJAG_05276","SJAG_02477","SJAG_01440","SJAG_00786","SJAG_01741","SJAG_00670","SJAG_00259","SJAG_02628","SJAG_01830","SJAG_03476","SJAG_04824","SJAG_02638","SJAG_01487","SJAG_00195","SJAG_01366","SJAG_01008","SJAG_04782","SJAG_00391","SJAG_00639","SJAG_04825","SJAG_16457","SJAG_01813"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62667,70699,71099,72527,72598,74906,78227,83792,84391,84636,84821,84876,85512,85946,86256,86422,86669,86869,87066,87067,87613,88241,88416,89162,89642,89674,89675,90009,90062,91246,91400,91439,92600,92632,92647,93622,94119,94153,94202,94547,95155,95687,95835,95935,95936,95985,96107,96108,96519,96528,97924,98774,98813,99096,99272,99700,100098,100427,101329,101369,101629,101925,102314,102716,102994,104380,104381,105870,106672,106871,106930,107345,107806,108067,108219,108430,108451,108452,109347,109612,109650,109804,110022,110416,111319,111384,111448,111688,111734,111942,112709,112854,112855,113079,113362,113721,113906,114188,114384,114739,114786],"is_not":false,"summary":null,"term":"GO:0003729"},{"annotations":[114382,77564,100965,105986,110768,109394,100468,114375,101315,107130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035925"},{"annotations":[107635,114982,73610,85767,96156,72115,103778,111215,114383,84475,94205,85551,93179,94576],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003730"},{"annotations":[87604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098808"},{"annotations":[87148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990825"}]},"cv_name":"molecular_function","definition":"Binding to messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.","definition_xrefs":["GOC:kmv","SO:0000234","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":116,"genes_by_uniquename":{"SJAG_00147":null,"SJAG_00195":null,"SJAG_00249":null,"SJAG_00259":null,"SJAG_00324":null,"SJAG_00338":null,"SJAG_00391":null,"SJAG_00425":null,"SJAG_00474":null,"SJAG_00513":null,"SJAG_00523":null,"SJAG_00563":null,"SJAG_00639":null,"SJAG_00670":null,"SJAG_00686":null,"SJAG_00713":null,"SJAG_00749":null,"SJAG_00759":null,"SJAG_00786":null,"SJAG_00833":null,"SJAG_00992":null,"SJAG_01008":null,"SJAG_01015":null,"SJAG_01222":null,"SJAG_01249":null,"SJAG_01301":null,"SJAG_01317":null,"SJAG_01366":null,"SJAG_01412":null,"SJAG_01440":null,"SJAG_01469":null,"SJAG_01487":null,"SJAG_01529":null,"SJAG_01650":null,"SJAG_01717":null,"SJAG_01741":null,"SJAG_01813":null,"SJAG_01819":null,"SJAG_01830":null,"SJAG_01843":null,"SJAG_01852":null,"SJAG_01882":null,"SJAG_01919":null,"SJAG_01954":null,"SJAG_01988":null,"SJAG_02036":null,"SJAG_02037":null,"SJAG_02043":null,"SJAG_02097":null,"SJAG_02207":null,"SJAG_02239":null,"SJAG_02243":null,"SJAG_02381":null,"SJAG_02477":null,"SJAG_02554":null,"SJAG_02573":null,"SJAG_02622":null,"SJAG_02628":null,"SJAG_02638":null,"SJAG_02663":null,"SJAG_02722":null,"SJAG_02829":null,"SJAG_02879":null,"SJAG_02894":null,"SJAG_03113":null,"SJAG_03157":null,"SJAG_03176":null,"SJAG_03214":null,"SJAG_03283":null,"SJAG_03476":null,"SJAG_03498":null,"SJAG_03533":null,"SJAG_03594":null,"SJAG_03674":null,"SJAG_03696":null,"SJAG_03788":null,"SJAG_03853":null,"SJAG_03922":null,"SJAG_03983":null,"SJAG_03995":null,"SJAG_04022":null,"SJAG_04056":null,"SJAG_04081":null,"SJAG_04084":null,"SJAG_04160":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04230":null,"SJAG_04271":null,"SJAG_04310":null,"SJAG_04360":null,"SJAG_04385":null,"SJAG_04405":null,"SJAG_04407":null,"SJAG_04427":null,"SJAG_04480":null,"SJAG_04589":null,"SJAG_04640":null,"SJAG_04682":null,"SJAG_04686":null,"SJAG_04738":null,"SJAG_04772":null,"SJAG_04782":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04825":null,"SJAG_04880":null,"SJAG_04919":null,"SJAG_04946":null,"SJAG_05003":null,"SJAG_05009":null,"SJAG_05010":null,"SJAG_05218":null,"SJAG_05276":null,"SJAG_05322":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"mRNA binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000499"],"synonyms":[{"name":"base pairing with mRNA","type":"narrow"}],"termid":"GO:0003729","terms_by_termid":{"GO:0003729":null,"GO:0003730":null,"GO:0035925":null,"GO:0098808":null,"GO:1990825":null}}


id: PBO:0068195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 502","termid":"PBO:0068195"}


id: FYPO:0005551
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cleavage furrow is decreased.","definition_xrefs":["PMID:27082518","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell division site","termid":"FYPO:0002869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to cleavage furrow","synonyms":[{"name":"decreased protein localisation to cleavage furrow","type":"exact"},{"name":"decreased protein localization to cleavage furrow during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to cleavage furrow during vegetative growth","type":"exact"},{"name":"reduced protein localization to cleavage furrow","type":"exact"}],"termid":"FYPO:0005551"}


id: PR:Q9UST8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonuclease H1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10642:SF0","PRO:DNx","OMA:SCHPO03401"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.06c","secondary_identifiers":["UniProtKB:Q9UST8"],"synonyms":[{"name":"RNase H (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RNASEH1","type":"exact"}],"termid":"PR:Q9UST8"}


id: PBO:0069500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 767, pseudogene","termid":"PBO:0069500"}


id: PBO:0084750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial manganese superoxide dismutase; protects cells against oxygen toxicity and oxidative stress; human mitochondrial SOD2 can complement a yeast null mutant and human cytoplasmic SOD1 can also complement when targeted to the mitochondrial matrix","termid":"PBO:0084750"}


id: GO:0035683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a memory T cell from the blood vessels into the surrounding tissue. A memory T cell is a distinctly differentiated long-lived T cell that has the phenotype CD45RO-positive and CD127-positive.","definition_xrefs":["CL:0000813","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell extravasation","termid":"GO:0072683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"memory T cell extravasation","synonyms":[{"name":"memory T-cell extravasation","type":"exact"}],"termid":"GO:0035683"}


id: SO:0001396
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified isoleucine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_isoleucine","secondary_identifiers":["MOD:00910"],"synonyms":[{"name":"ModIle","type":"exact"},{"name":"modified L isoleucine","type":"exact"},{"name":"modified L-isoleucine","type":"exact"}],"termid":"SO:0001396"}


id: PBO:0044636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA cross-link repair 1C pseudogene 1","termid":"PBO:0044636"}


id: PBO:0048935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi transport 1B","termid":"PBO:0048935"}


id: PBO:0035899
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_secretion_during_vegetative_growth","termid":"PBO:0035899"}


id: PATO:0000708
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A threshold which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"threshold","termid":"PATO:0000152"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased threshold","secondary_identifiers":["PATO:0000707"],"synonyms":[{"name":"low threshold","type":"exact"}],"termid":"PATO:0000708"}


id: PBO:0027926
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_nitrogen_starvation_in_h-_cells","termid":"PBO:0027926"}


id: GO:0033642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates a change in state or activity of a host cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gravitational stimulus. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host response to gravitational stimulus (obsolete GO:0033642)","synonyms":[{"name":"response to gravitational stimulus","type":"broad"}],"termid":"GO:0033642"}


id: PBO:0067647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 822, pseudogene","termid":"PBO:0067647"}


id: GO:0034347
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type III interferon. Interferon lambda is the only member of the type III interferon found so far.","definition_xrefs":["PMID:15546383","GOC:add","PMID:16734557","ISBN:0126896631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interferon binding","termid":"GO:0019961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"type III interferon binding","synonyms":[{"name":"interferon-lambda binding","type":"narrow"}],"termid":"GO:0034347"}


id: PBO:0065399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMA3 antisense RNA 1","termid":"PBO:0065399"}


id: SO:0000093
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene from chromoplast_sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"chromoplast_sequence","termid":"SO:0000744"},{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromoplast_gene","synonyms":[{"name":"chromoplast gene","type":"exact"}],"termid":"SO:0000093"}


id: PBO:0113527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar Ca2+ ATPase involved in depleting cytosol of Ca2+ ions; prevents growth inhibition by activation of calcineurin in presence of elevated concentrations of calcium; targeted to vacuole via AP-3 pathway; similar to mammalian PMCA1a","termid":"PBO:0113527"}


id: PBO:0089635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, iron ion Mrs3","termid":"PBO:0089635"}


id: FYPO:0005826
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more generation of precursor metabolites and energy RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells). Generation of precursor metabolites and energy RNAs are transcribed from genes whose products are involved in the formation of precursor metabolites and the liberation of energy from these substances.","definition_xrefs":["GO:0006091","PMID:25102102","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased level of generation of precursor metabolites and energy gene mRNA during vegetative growth","synonyms":[{"name":"decreased generation of precursor metabolites and energy RNA accumulation during vegetative growth","type":"related"},{"name":"decreased level of generation of precursor metabolites and energy RNA during mitotic cell cycle","type":"related"},{"name":"decreased level of generation of precursor metabolites and energy gene RNA during vegetative growth","type":"exact"},{"name":"decreased level of generation of precursor metabolites and energy transcripts during vegetative growth","type":"exact"},{"name":"reduced level of generation of precursor metabolites and energy gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0005826"}


id: PBO:0080243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 6, pseudogene","termid":"PBO:0080243"}


id: GO:1900066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ethanol catabolic process.","definition_xrefs":["PMID:10608811","PMID:7760841","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ethanol catabolic process","termid":"GO:1900065"},{"relation_name":"is_a","term_name":"positive regulation of cellular alcohol catabolic process","termid":"GO:1900421"},{"relation_name":"positively_regulates","term_name":"ethanol catabolic process","termid":"GO:0006068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ethanol catabolic process","synonyms":[{"name":"activation of ethanol breakdown","type":"narrow"},{"name":"activation of ethanol catabolic process","type":"narrow"},{"name":"activation of ethanol catabolism","type":"narrow"},{"name":"activation of ethanol degradation","type":"narrow"},{"name":"positive regulation of ethanol breakdown","type":"exact"},{"name":"positive regulation of ethanol catabolism","type":"exact"},{"name":"positive regulation of ethanol degradation","type":"exact"},{"name":"up regulation of ethanol breakdown","type":"exact"},{"name":"up regulation of ethanol catabolic process","type":"related"},{"name":"up regulation of ethanol catabolism","type":"exact"},{"name":"up regulation of ethanol degradation","type":"exact"},{"name":"up-regulation of ethanol breakdown","type":"exact"},{"name":"up-regulation of ethanol catabolic process","type":"related"},{"name":"up-regulation of ethanol catabolism","type":"exact"},{"name":"up-regulation of ethanol degradation","type":"exact"},{"name":"upregulation of ethanol breakdown","type":"exact"},{"name":"upregulation of ethanol catabolic process","type":"related"},{"name":"upregulation of ethanol catabolism","type":"exact"},{"name":"upregulation of ethanol degradation","type":"exact"}],"termid":"GO:1900066"}


id: PBO:0064808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 2","termid":"PBO:0064808"}


id: PATO:0002491
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed anterodorsally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterodorsal orientation","synonyms":[{"name":"anterodorsally directed","type":"exact"}],"termid":"PATO:0002491"}


id: PBO:0091361
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complented by human NRAS","termid":"PBO:0091361"}


id: PATO:0002428
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 3-D shape with three supports or legs.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripodal","termid":"PATO:0002428"}


id: GO:0080182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of three methyl groups to lysine at position 4 of the histone.","definition_xrefs":["GOC:tb","GOC:se","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K4 trimethylation (obsolete GO:0080182)","termid":"GO:0080182"}


id: GO:0060964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates the rate, frequency, or extent of the downregulation of gene expression through the action of microRNAs (miRNAs).","definition_xrefs":["GOC:aruk","GOC:bc","GOC:dph","GOC:rl","PMID:23985560","GOC:tb","PMID:28379604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-transcriptional gene silencing by regulatory ncRNA","termid":"GO:1900368"},{"relation_name":"regulates","term_name":"miRNA-mediated post-transcriptional gene silencing","termid":"GO:0035195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of miRNA-mediated gene silencing","synonyms":[{"name":"regulation of gene silencing by miRNA","type":"exact"},{"name":"regulation of gene silencing by microRNA","type":"exact"}],"termid":"GO:0060964"}


id: PATO:0002411
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of yellow and brown hue.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brown","termid":"PATO:0000952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yellow brown","termid":"PATO:0002411"}


id: PBO:0088547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Efg1","termid":"PBO:0088547"}


id: FYPO:0002020
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell when the cell is subject to nitrogen starvation is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level","termid":"FYPO:0001890"},{"relation_name":"is_a","term_name":"altered level of substance in cell during nitrogen starvation","termid":"FYPO:0004139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased RNA level during nitrogen starvation","synonyms":[{"name":"increased RNA accumulation during nitrogen starvation","type":"related"},{"name":"increased RNA level during nitrogen depletion","type":"exact"},{"name":"increased RNA level during nitrogen deprivation","type":"exact"},{"name":"increased transcript level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0002020"}


id: GO:0097616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism activates, maintains or increases the frequency, rate or extent of the type IV pilus-dependent motility of a symbiont organism (i.e. the controlled movement of a bacterial cell which is dependent on the presence of type IV pili, and which includes social gliding motility and twitching motility). The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:12037568","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of symbiont type IV pilus-dependent motility","termid":"GO:0097615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation by host of symbiont type IV pilus-dependent motility","synonyms":[{"name":"positive regulation by host of bacterial type IV pilus-dependent motility","type":"exact"}],"termid":"GO:0097616"}


id: PATO:0000009
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000009 absolute speed (obsolete PATO:0000009)","termid":"PATO:0000009"}


id: MOD:00443
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Covalent modification of a peptide or protein L-arginine residue to protonated omega-N,omega-N-dimethlyated L-arginine with secondary neutral loss of an N,N-dimethylamine molecular fragment.","definition_xrefs":["PubMed:18688235","PubMed:15835918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified residue with a secondary neutral loss","termid":"MOD:00431"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated omega-N,omega-N-dimethlyated L-arginine with secondary neutral loss of N,N-dimethylamine","synonyms":[{"name":"dDMA-NoMe2+Arg","type":"exact"}],"termid":"MOD:00443"}


id: GO:0009505
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A more or less rigid structure lying outside the cell membrane of a cell and composed of cellulose and pectin and other organic and inorganic substances.","definition_xrefs":["ISBN:0471245208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall","termid":"GO:0005618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"plant-type cell wall","synonyms":[{"name":"cellulose and pectin-containing cell wall","type":"exact"},{"name":"plant cell wall","type":"narrow"}],"termid":"GO:0009505"}


id: GO:1904825
data:
  {"annotated_genes":["SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904518"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location at a microtubule plus-end.","definition_xrefs":["GO_REF:0000087","GOC:TermGenie","PMID:24039245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to microtubule end","termid":"GO:1905725"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to microtubule plus-end","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to microtubule plus-end","type":"exact"}],"termid":"GO:1904825","terms_by_termid":{"GO:1904518":null}}


id: PBO:0038937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase 5 (class III), chi polypeptide","termid":"PBO:0038937"}


id: PBO:0002846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ca2+/Mn2+ transporting P-type ATPase P5 type Cta5","termid":"PBO:0002846"}


id: PBO:0080703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 7A","termid":"PBO:0080703"}


id: GO:0005642
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Stacks of endoplasmic reticulum (ER) membranes containing a high density of nuclear pores, thought to form from excess nuclear membrane components, that have been described in a number of different cells. Annulate lamellar membranes are continuous with and embedded within the ER.","definition_xrefs":["PMID:12631728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"},{"relation_name":"part_of","term_name":"nuclear outer membrane-endoplasmic reticulum membrane network","termid":"GO:0042175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"annulate lamellae","termid":"GO:0005642"}


id: PBO:0000747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Bet1 (predicted)","termid":"PBO:0000747"}


id: GO:0052828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 3,4-bisphosphate + H2O = 1D-myo-inositol 3-phosphate + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol bisphosphate phosphatase activity","termid":"GO:0016312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"inositol-3,4-bisphosphate 4-phosphatase activity","secondary_identifiers":["RHEA:43388","Reactome:R-HSA-1855202"],"termid":"GO:0052828"}


id: PBO:0089695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar CorA family magnesium ion transmembrane transporter Mnr2","termid":"PBO:0089695"}


id: PBO:0085489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proline oxidase; nuclear-encoded mitochondrial protein involved in utilization of proline as sole nitrogen source; PUT1 transcription is induced by Put3p in the presence of proline and the absence of a preferred nitrogen source","termid":"PBO:0085489"}


id: GO:0018452
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-exo-hydroxycamphor + NAD+ = NADH + H+ + 2,5-diketocamphane.","definition_xrefs":["UM-BBD_reactionID:r0427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"5-exo-hydroxycamphor dehydrogenase activity","secondary_identifiers":["RHEA:32879","EC:1.1.1.327","MetaCyc:R542-RXN"],"termid":"GO:0018452"}


id: GO:1900905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hexadecanal metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular metabolic process","termid":"GO:0031323"},{"relation_name":"regulates","term_name":"hexadecanal metabolic process","termid":"GO:0046458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hexadecanal metabolic process","synonyms":[{"name":"regulation of hexadecanal metabolism","type":"exact"}],"termid":"GO:1900905"}


id: GO:0090056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving chlorophyll.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tetrapyrrole metabolic process","termid":"GO:1901401"},{"relation_name":"regulates","term_name":"chlorophyll metabolic process","termid":"GO:0015994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"regulation of chlorophyll metabolic process","termid":"GO:0090056"}


id: PBO:0040046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPC1A pseudogene 2","termid":"PBO:0040046"}


id: PBO:0073061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDA1 domain containing 1 pseudogene 3","termid":"PBO:0073061"}


id: PBO:0027522
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_response_to_cytokinesis_checkpoint_signaling","termid":"PBO:0027522"}


id: PBO:0013069
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complement S. cerevisiae CDC28 when introns removed","termid":"PBO:0013069"}


id: _global:increased_in_presence_of
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Identifies a substance, where the modification is present to a greater extent in the presence than in the absence of the substance.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_in_presence_of","termid":"_global:increased_in_presence_of"}


id: PBO:0043909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytokine receptor like factor 2","termid":"PBO:0043909"}


id: FYPO:0007915
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which Endoplasmic Reticulum localization is normal.","definition_xrefs":["PomBase:vw","PMID:10641037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal organelle localization","termid":"FYPO:0007913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal endoplasmic reticulum localization","termid":"FYPO:0007915"}


id: PBO:0087643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the glycosylphosphatidylinositol transamidase complex; involved in attachment of glycosylphosphatidylinositol (GPI) anchors to proteins; may have a role in recognition of the attachment signal or the lipid portion of GPI; ortholog of human PIGU; partially complements a class U CHO cell line with a mutation in the PIGU ortholog","termid":"PBO:0087643"}


id: FYPO:0001047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell proceeds through the mitotic metaphase/anaphase transition in the presence of an uncorrected problem (such as chromosome structure or kinetochore attachment), and as a result undergoes abnormal nuclear division and subsequently dies.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic catastrophe (obsolete FYPO:0001047)","synonyms":[{"name":"mitotic catastrophe during mitotic cell cycle","type":"related"},{"name":"mitotic catastrophe during vegetative growth","type":"exact"}],"termid":"FYPO:0001047"}


id: PR:O13928
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rho3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13928"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein rho3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.08","synonyms":[{"name":"Spom972h-rho3","type":"exact"}],"termid":"PR:O13928"}


id: FYPO:0001299
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which palmitoyl-CoA ligase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal palmitoyl-CoA ligase activity","termid":"FYPO:0001297"},{"relation_name":"is_a","term_name":"abolished long-chain fatty acid-CoA ligase activity","termid":"FYPO:0001306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished palmitoyl-CoA ligase activity","synonyms":[{"name":"abolished palmitoyl-CoA synthetase activity","type":"exact"},{"name":"palmitoyl-CoA ligase activity abolished","type":"exact"}],"termid":"FYPO:0001299"}


id: PR:Q10480
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pnu1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclease 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.08","synonyms":[{"name":"SpNUC1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pnu1","type":"exact"}],"termid":"PR:Q10480"}


id: PBO:0113509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type 2C protein phosphatase (PP2C); dephosphorylates Hog1p, inactivating the osmosensing MAPK cascade; involved in Fus3p activation during pheromone response; deletion affects precursor tRNA splicing, mitochondrial inheritance, and sporulation; involved in myosin-V dependent inheritance of mitochondria, peroxisomes, vacuoles and secretory vesicles; localizes to the nucleus, cytoplasm and peroxisomes","termid":"PBO:0113509"}


id: PBO:0086617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to mitochondria; YNL115C is not an essential gene","termid":"PBO:0086617"}


id: GO:1900942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of (Z)-nonadeca-1,14-diene biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of olefin biosynthetic process","termid":"GO:1900912"},{"relation_name":"is_a","term_name":"negative regulation of (Z)-nonadeca-1,14-diene metabolic process","termid":"GO:1900939"},{"relation_name":"is_a","term_name":"regulation of (Z)-nonadeca-1,14-diene biosynthetic process","termid":"GO:1900941"},{"relation_name":"negatively_regulates","term_name":"(Z)-nonadeca-1,14-diene biosynthetic process","termid":"GO:1900879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of (Z)-nonadeca-1,14-diene biosynthetic process","synonyms":[{"name":"down regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"down regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"down regulation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"exact"},{"name":"down regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"down regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"},{"name":"down-regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"down-regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"down-regulation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"exact"},{"name":"down-regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"down-regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"},{"name":"downregulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"downregulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"downregulation of (Z)-nonadeca-1,14-diene biosynthetic process","type":"exact"},{"name":"downregulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"downregulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"},{"name":"inhibition of (Z)-nonadeca-1,14-diene anabolism","type":"narrow"},{"name":"inhibition of (Z)-nonadeca-1,14-diene biosynthesis","type":"narrow"},{"name":"inhibition of (Z)-nonadeca-1,14-diene biosynthetic process","type":"narrow"},{"name":"inhibition of (Z)-nonadeca-1,14-diene formation","type":"narrow"},{"name":"inhibition of (Z)-nonadeca-1,14-diene synthesis","type":"narrow"},{"name":"negative regulation of (Z)-nonadeca-1,14-diene anabolism","type":"exact"},{"name":"negative regulation of (Z)-nonadeca-1,14-diene biosynthesis","type":"exact"},{"name":"negative regulation of (Z)-nonadeca-1,14-diene formation","type":"exact"},{"name":"negative regulation of (Z)-nonadeca-1,14-diene synthesis","type":"exact"}],"termid":"GO:1900942"}


id: GO:1902904
data:
  {"annotated_genes":["SJAG_04982","SJAG_01894","SJAG_02700","SJAG_03455","SJAG_00279","SJAG_01993"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88370,94955,110387,84324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[86930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"},{"annotations":[93786,110390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of fibril organization.","definition_xrefs":["GOC:PARL","GOC:TermGenie","PMID:23921388","GOC:rl","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"negatively_regulates","term_name":"supramolecular fiber organization","termid":"GO:0097435"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null,"SJAG_03455":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of supramolecular fiber organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of fibril organisation","type":"related"},{"name":"down regulation of fibril organization","type":"related"},{"name":"down-regulation of fibril organisation","type":"related"},{"name":"down-regulation of fibril organization","type":"related"},{"name":"downregulation of fibril organisation","type":"related"},{"name":"downregulation of fibril organization","type":"related"},{"name":"inhibition of fibril organisation","type":"narrow"},{"name":"inhibition of fibril organization","type":"narrow"},{"name":"negative regulation of fibril organisation","type":"related"}],"termid":"GO:1902904","terms_by_termid":{"GO:0034316":null,"GO:0042989":null,"GO:0051016":null}}


id: PBO:0028720
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_peroxisome_size","termid":"PBO:0028720"}


id: GO:0062198
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A region of heterochromatin associated with sites in rDNA repeats where replication forks pause.","definition_xrefs":["PMID:25417108"],"gene_count":0,"genotype_count":0,"name":"obsolete rDNA replication pause site heterochromatin (obsolete GO:0062198)","termid":"GO:0062198"}


id: PBO:0083169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps YAL044W-A","termid":"PBO:0083169"}


id: PATO:0000343
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000343 gametophyte incompatible value (obsolete PATO:0000343)","termid":"PATO:0000343"}


id: PBO:0011071
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in eukaryotes only","termid":"PBO:0011071"}


id: PATO:0002102
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a cell that arises by virtue of whether the bearer exhibits the ability to grow and proliferate in number through cell division.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular quality","termid":"PATO:0001396"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferative","termid":"PATO:0002102"}


id: PR:Q10197
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tubulin-specific chaperone D that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03671","PANTHER:PTHR12658:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin-folding cofactor D (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.04c","secondary_identifiers":["UniProtKB:Q10197"],"synonyms":[{"name":"Spom972h-TBCD","type":"exact"},{"name":"altered polarity protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10197"}


id: PBO:0073574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHISA5 pseudogene 2","termid":"PBO:0073574"}


id: PATO:0001222
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001222 solid_angle_unit (obsolete PATO:0001222)","termid":"PATO:0001222"}


id: PBO:0057396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548f-4","termid":"PBO:0057396"}


id: GO:0042814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Polarized growth from one end of a cell.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unidimensional cell growth","termid":"GO:0009826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monopolar cell growth","synonyms":[{"name":"monopolar cell elongation","type":"narrow"},{"name":"monopolar growth","type":"broad"},{"name":"polar cell elongation","type":"narrow"}],"termid":"GO:0042814"}


id: PBO:0042237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell cycle progression 1","termid":"PBO:0042237"}


id: FYPO:0004319
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a cyclin-dependent protein kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein kinase activity","termid":"FYPO:0002700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"increased cyclin-dependent protein kinase activity","termid":"FYPO:0004319"}


id: GO:0030866
data:
  {"annotated_genes":["SJAG_01894","SJAG_00700","SJAG_00228","SJAG_01805","SJAG_02245","SJAG_04100","SJAG_04887","SJAG_02177","SJAG_04001","SJAG_01964","SJAG_03119","SJAG_02511","SJAG_04644","SJAG_01384","SJAG_04982","SJAG_02831","SJAG_03379","SJAG_03088","SJAG_04621","SJAG_03025","SJAG_00521","SJAG_00938","SJAG_04930","SJAG_04077","SJAG_02431","SJAG_03044","SJAG_01143","SJAG_04886","SJAG_02228","SJAG_03596","SJAG_03086","SJAG_04703","SJAG_03048","SJAG_00661","SJAG_02075","SJAG_02864","SJAG_00279","SJAG_03146","SJAG_01665","SJAG_04597","SJAG_03045","SJAG_00649","SJAG_01268","SJAG_00082","SJAG_04052","SJAG_02592","SJAG_02700","SJAG_04498","SJAG_04465","SJAG_01732","SJAG_03705","SJAG_00268","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96233,99377,113976],"is_not":false,"summary":null,"term":"GO:0030866"},{"annotations":[85891,99374,99318,84216,114562,95742,99129,106747,95920,107729,110948,108227,86730,90852,101206,103212,108250,114920,93979,107078],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0000147"},{"annotations":[94954,93782,91346,84322,94892,101207,101189],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044396"},{"annotations":[106857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000915"},{"annotations":[94092,85392,104190,94352],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071520"},{"annotations":[101192,106858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044837"},{"annotations":[93709,93984,88371,84326,93785,113112,88587,94093,115598,114528,94957,98486,88633,91347,108367,113951,97322,114706,98626,107933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903475"},{"annotations":[94094],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[96760,84327,94958,93710,91348,98487,113952,96990,108368,94095],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902404"},{"annotations":[98430],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[90469,86061],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[115314,89866,90435],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of actin-based cytoskeletal structures in the cell cortex, i.e. just beneath the plasma membrane.","definition_xrefs":["GOC:dph","GOC:pf","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin cytoskeleton organization","termid":"GO:0030036"},{"relation_name":"is_a","term_name":"cortical cytoskeleton organization","termid":"GO:0030865"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00228":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00521":null,"SJAG_00649":null,"SJAG_00661":null,"SJAG_00700":null,"SJAG_00938":null,"SJAG_01143":null,"SJAG_01268":null,"SJAG_01384":null,"SJAG_01665":null,"SJAG_01732":null,"SJAG_01805":null,"SJAG_01894":null,"SJAG_01964":null,"SJAG_02075":null,"SJAG_02177":null,"SJAG_02228":null,"SJAG_02245":null,"SJAG_02431":null,"SJAG_02511":null,"SJAG_02592":null,"SJAG_02700":null,"SJAG_02831":null,"SJAG_02864":null,"SJAG_03025":null,"SJAG_03044":null,"SJAG_03045":null,"SJAG_03048":null,"SJAG_03086":null,"SJAG_03088":null,"SJAG_03119":null,"SJAG_03146":null,"SJAG_03379":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_03705":null,"SJAG_04001":null,"SJAG_04052":null,"SJAG_04077":null,"SJAG_04100":null,"SJAG_04465":null,"SJAG_04498":null,"SJAG_04597":null,"SJAG_04621":null,"SJAG_04644":null,"SJAG_04703":null,"SJAG_04886":null,"SJAG_04887":null,"SJAG_04930":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0030036","GO:0008150"],"is_obsolete":false,"name":"cortical actin cytoskeleton organization","references_by_uniquename":{"GO_REF:0000107":null,"PMID:27059155":null,"PMID:32915139":null},"secondary_identifiers":["GO:0033109"],"synonyms":[{"name":"actin cortex stabilization","type":"exact"},{"name":"cortical actin cytoskeleton organisation","type":"exact"},{"name":"cortical actin cytoskeleton organization and biogenesis","type":"related"},{"name":"cortical actin cytoskeleton stabilization","type":"exact"},{"name":"cortical resistance","type":"related"}],"termid":"GO:0030866","terms_by_termid":{"GO:0000147":null,"GO:0000915":null,"GO:0030866":null,"GO:0044396":null,"GO:0044837":null,"GO:0071520":null,"GO:0120306":null,"GO:1902404":null,"GO:1903475":null,"GO:1903479":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null}}


id: PR:O94314
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC215.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized hydrolase C215.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.10","synonyms":[{"name":"Spom972h-SPBC215.10","type":"exact"}],"termid":"PR:O94314"}


id: PBO:0060611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCCRP1, F-box associated domain containing","termid":"PBO:0060611"}


id: FYPO:0006046
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which in which chromosomes do not align at the midpoint of the long axis of the mitotic spindle during metaphase chromosome congression.","definition_xrefs":["PomBase:mah","PMID:27146110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic chromosome congression","termid":"FYPO:0000030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0000337","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"uncentered mitotic chromosome congression","synonyms":[{"name":"abnormal mitotic chromosome congression with loss of chromosome centering","type":"exact"},{"name":"loss of mitotic chromosome centering","type":"exact"},{"name":"uncentered chromosome congression during mitosis","type":"exact"},{"name":"uncentered chromosome congression during mitotic metaphase","type":"exact"},{"name":"uncentered mitotic chromosome congression during vegetative growth","type":"exact"}],"termid":"FYPO:0006046"}


id: MOD:01408
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-threonine residue to form L-threonine thiazoline-4-carboxylic acid.","definition_xrefs":["RESID:AA0485","PubMed:11320328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-threonine thiazoline-4-carboxylic acid","synonyms":[{"name":"(4S)-2-[(1S,2R)-1-amino-2-hydroxypropyl]-4,5-dihydro-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-hydroxypropyl]-4,5-dihydro-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK (4S)-thiazoline-4-carboxylic acid (Thr-Cys)","type":"exact"},{"name":"L-threonine (4S)-thiazoline-4-carboxylic acid","type":"exact"}],"termid":"MOD:01408"}


id: GO:0031589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell to the underlying substrate via adhesion molecules.","definition_xrefs":["GOC:mah","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion","termid":"GO:0007155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell-substrate adhesion","termid":"GO:0031589"}


id: GO:0047860
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(3,5-diiodo-4-hydroxyphenyl)lactate + NAD+ = 3-(3,5-diiodo-4-hydroxyphenyl)pyruvate + H+ + NADH.","definition_xrefs":["RHEA:20293","EC:1.1.1.96"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"diiodophenylpyruvate reductase activity","secondary_identifiers":["KEGG_REACTION:R03431","MetaCyc:DIIODOPHENYLPYRUVATE-REDUCTASE-RXN"],"synonyms":[{"name":"2-oxo acid reductase activity","type":"related"},{"name":"3-(3,5-diiodo-4-hydroxyphenyl)lactate:NAD+ oxidoreductase activity","type":"related"},{"name":"KAR","type":"related"},{"name":"aromatic alpha-keto acid","type":"related"}],"termid":"GO:0047860"}


id: GO:2000673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of motor neuron apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neuron apoptotic process","termid":"GO:0043525"},{"relation_name":"is_a","term_name":"regulation of motor neuron apoptotic process","termid":"GO:2000671"},{"relation_name":"positively_regulates","term_name":"motor neuron apoptotic process","termid":"GO:0097049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of motor neuron apoptotic process","synonyms":[{"name":"positive regulation of motoneuron apoptosis","type":"exact"},{"name":"positive regulation of motor neuron apoptosis","type":"narrow"}],"termid":"GO:2000673"}


id: PBO:0034764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex ubiquitin conjugating enzyme E2 Ubc7","termid":"PBO:0034764"}


id: PBO:0071485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 26","termid":"PBO:0071485"}


id: PR:Q9UUI4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glioma tumor suppressor candidate region gene 2 protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22F8.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.09","secondary_identifiers":["UniProtKB:Q9UUI4"],"synonyms":[{"name":"Spom972h-GLTSCR2","type":"exact"}],"termid":"PR:Q9UUI4"}


id: GO:0002458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction of T cells in the periphery, in this case, any location in the body other than the thymus.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell mediated immunity","termid":"GO:0002456"},{"relation_name":"is_a","term_name":"peripheral tolerance induction","termid":"GO:0002465"},{"relation_name":"is_a","term_name":"T cell tolerance induction","termid":"GO:0002517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peripheral T cell tolerance induction","synonyms":[{"name":"peripheral T lymphocyte tolerance induction","type":"exact"},{"name":"peripheral T-cell tolerance induction","type":"exact"},{"name":"peripheral T-lymphocyte tolerance induction","type":"exact"}],"termid":"GO:0002458"}


id: PBO:0047129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 170 member A","termid":"PBO:0047129"}


id: PATO:0001915
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the front and upper surface of an organism relative to another entity.","definition_xrefs":["PATOC:wd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior to","termid":"PATO:0001632"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterodorsal to","termid":"PATO:0001915"}


id: GO:0102948
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-(3,4-dihydroxyphenyl)-5-hydroxy-4-oxo-4H-chromen-7-olate luteolin-7-olate + a glucosylated glucose acceptor = isoorientin + a non glucosylated glucose acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete luteolin C-glucosyltransferase activity (obsolete GO:0102948)","termid":"GO:0102948"}


id: FYPO:0000429
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the G0 to G1 transition begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal G0 to G1 transition","termid":"FYPO:0002955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"delayed G0 to G1 transition","synonyms":[{"name":"delayed G0/G1 transition","type":"exact"},{"name":"delayed exit from G0","type":"exact"},{"name":"delayed exit from cell quiescence","type":"exact"},{"name":"slow cell population growth following nitrogen starvation","type":"related"}],"termid":"FYPO:0000429"}


id: GO:0090385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation of a phagolysosome from a phagosome and a lysosome.","definition_xrefs":["GOC:kmv","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"},{"relation_name":"part_of","term_name":"phagolysosome assembly","termid":"GO:0001845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0061024","GO:0044085","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"phagosome-lysosome fusion","termid":"GO:0090385"}


id: PBO:0080721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WNT signaling pathway activating non-coding RNA","termid":"PBO:0080721"}


id: PBO:0071401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 7","termid":"PBO:0071401"}


id: PBO:0086711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; mutant exhibits mitophagy defects; in closely related species and other S. cerevisiae strain backgrounds YIL165C and adjacent ORF, YIL164C, likely constitute a single ORF encoding a nitrilase gene","termid":"PBO:0086711"}


id: FYPO:0004930
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of protein degradation is decreased during sporulation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased protein level during cellular response to nitrogen starvation","termid":"FYPO:0001219"},{"relation_name":"is_a","term_name":"decreased protein degradation","termid":"FYPO:0002797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein degradation during sporulation","synonyms":[{"name":"decreased protein catabolic process during sporulation","type":"exact"},{"name":"decreased protein catabolism during sporulation","type":"exact"},{"name":"reduced protein degradation during sporulation","type":"exact"}],"termid":"FYPO:0004930"}


id: FYPO:0001906
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype observed in the vegetative growth phase of the life cycle in which the response to thiamine starvation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to starvation during vegetative growth","termid":"FYPO:0001339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000298","FYPO:0001320"],"is_obsolete":false,"name":"abnormal cellular response to thiamine starvation","synonyms":[{"name":"abnormal cellular response to thiamin starvation","type":"exact"},{"name":"abnormal cellular response to thiamine depletion","type":"exact"},{"name":"abnormal cellular response to thiamine deprivation","type":"exact"},{"name":"abnormal cellular response to thiamine starvation during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to thiamine starvation during vegetative growth","type":"exact"},{"name":"abnormal cellular response to vitamin B1 starvation","type":"exact"}],"termid":"FYPO:0001906"}


id: PATO:0000122
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 1-D extent quality which is equal to the distance between two points.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1-D extent","termid":"PATO:0001708"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"length","termid":"PATO:0000122"}


id: PBO:0062965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 8","termid":"PBO:0062965"}


id: PBO:0045127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dmx like 1","termid":"PBO:0045127"}


id: PBO:0063626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin 1 pseudogene 2","termid":"PBO:0063626"}


id: PBO:0054655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2060","termid":"PBO:0054655"}


id: GO:0016290
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: palmitoyl-CoA + H2O = CoA + palmitate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete palmitoyl-CoA hydrolase activity (obsolete GO:0016290)","synonyms":[{"name":"fatty acyl thioesterase I","type":"related"},{"name":"long-chain fatty-acyl-CoA hydrolase activity","type":"broad"},{"name":"palmitoyl coenzyme A hydrolase activity","type":"related"},{"name":"palmitoyl thioesterase activity","type":"related"},{"name":"palmitoyl-CoA deacylase activity","type":"related"},{"name":"palmityl thioesterase I","type":"related"},{"name":"palmityl thioesterase activity","type":"related"},{"name":"palmityl-CoA deacylase activity","type":"related"}],"termid":"GO:0016290"}


id: GO:0098522
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A neuromuscular junction in which the target muscle cell is a skeletal muscle fiber.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excitatory neuromuscular junction","termid":"GO:0098520"},{"relation_name":"is_a","term_name":"neuromuscular junction of myotube","termid":"GO:0098523"},{"relation_name":"is_a","term_name":"cholinergic synapse","termid":"GO:0098981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neuromuscular junction of skeletal muscle fiber","termid":"GO:0098522"}


id: PBO:0066627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reactive intermediate imine deaminase A homolog","termid":"PBO:0066627"}


id: GO:0050830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Reactions triggered in response to the presence of a Gram-positive bacterium that act to protect the cell or organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to bacterium","termid":"GO:0042742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to Gram-positive bacterium","synonyms":[{"name":"Gram-positive antibacterial peptide activity","type":"related"},{"name":"defence response to Gram-positive bacteria","type":"exact"},{"name":"defence response to Gram-positive bacterium","type":"exact"},{"name":"defense response to Gram-positive bacteria","type":"exact"}],"termid":"GO:0050830"}


id: PBO:0073276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 10 pseudogene 1","termid":"PBO:0073276"}


id: PBO:0112844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asynchronous replication autosomal RNA 1-1","termid":"PBO:0112844"}


id: GO:0050121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acyl-D-glucosamine = N-acyl-D-mannosamine.","definition_xrefs":["EC:5.1.3.8","MetaCyc:N-ACYLGLUCOSAMINE-2-EPIMERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"N-acylglucosamine 2-epimerase activity","secondary_identifiers":["Reactome:R-HSA-6803761","RHEA:19033"],"synonyms":[{"name":"GlcNAc 2-epimerase activity","type":"related"},{"name":"N-acetyl-D-glucosamine 2-epimerase activity","type":"related"},{"name":"N-acetylglucosamine 2-epimerase activity","type":"related"},{"name":"N-acyl-D-glucosamine 2-epimerase activity","type":"related"},{"name":"acylglucosamine 2-epimerase activity","type":"related"}],"termid":"GO:0050121"}


id: GO:1901004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ubiquinone-6. Ubiquinone-6 is a ubiquinone compound having a (2E,6E,10E,14E,18E)-3,7,11,15,19,23-hexamethyltetracosa-2,6,10,14,18,22-hexaen-1-yl substituent at position 2.","definition_xrefs":["GOC:al","GOC:TermGenie","PMID:1409592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquinone metabolic process","termid":"GO:0006743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ubiquinone-6 metabolic process","synonyms":[{"name":"coenzyme Q6 metabolic process","type":"exact"},{"name":"coenzyme Q6 metabolism","type":"exact"},{"name":"ubiquinone-6 metabolism","type":"exact"}],"termid":"GO:1901004"}


id: PBO:0059000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolism of cobalamin associated B","termid":"PBO:0059000"}


id: GO:1904244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pancreatic trypsinogen secretion.","definition_xrefs":["GOC:TermGenie","PMID:12771515","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein secretion","termid":"GO:0050714"},{"relation_name":"is_a","term_name":"regulation of pancreatic trypsinogen secretion","termid":"GO:1904242"},{"relation_name":"positively_regulates","term_name":"pancreatic trypsinogen secretion","termid":"GO:1990747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of pancreatic trypsinogen secretion","synonyms":[{"name":"activation of pancreatic trypsinogen release","type":"narrow"},{"name":"activation of pancreatic trypsinogen secretion","type":"narrow"},{"name":"positive regulation of pancreatic trypsinogen release","type":"exact"},{"name":"up regulation of pancreatic trypsinogen release","type":"exact"},{"name":"up regulation of pancreatic trypsinogen secretion","type":"exact"},{"name":"up-regulation of pancreatic trypsinogen release","type":"exact"},{"name":"up-regulation of pancreatic trypsinogen secretion","type":"exact"},{"name":"upregulation of pancreatic trypsinogen release","type":"exact"},{"name":"upregulation of pancreatic trypsinogen secretion","type":"exact"}],"termid":"GO:1904244"}


id: PBO:0000855
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.1","termid":"PBO:0000855"}


id: GO:0006157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxyadenosine, 2-deoxyribosyladenine, one of the four major nucleosides of DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyadenosine metabolic process","termid":"GO:0046090"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside catabolic process","termid":"GO:0046124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"deoxyadenosine catabolic process","secondary_identifiers":["GO:0006159"],"synonyms":[{"name":"deoxyadenosine breakdown","type":"exact"},{"name":"deoxyadenosine catabolism","type":"exact"},{"name":"deoxyadenosine degradation","type":"exact"},{"name":"deoxyadenosine phosphorolysis","type":"related"}],"termid":"GO:0006157"}


id: PBO:0066381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDX pseudogene 1","termid":"PBO:0066381"}


id: PBO:0004381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ protein Xdj1 (predicted)","termid":"PBO:0004381"}


id: PBO:0091134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L53","termid":"PBO:0091134"}


id: FYPO:0006732
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to transcribed regions of chromatin is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000138","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to chromatin distal to replication origin","synonyms":[{"name":"normal protein localisation to chromatin distal to replication origin","type":"exact"},{"name":"normal protein localization to chromatin distal to replication origin during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin distal to replication origin during vegetative growth","type":"exact"}],"termid":"FYPO:0006732"}


id: SO:0001269
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a signal recognition particle (SRP) RNA.","direct_ancestors":[{"relation_name":"has_quality","term_name":"SRP_RNA_encoding","termid":"SO:0000642"},{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP_RNA_gene","synonyms":[{"name":"SRP RNA gene","type":"exact"}],"termid":"SO:0001269"}


id: FYPO:0006487
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3,4-bisphosphate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular phosphoinositide level","termid":"FYPO:0001286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular phosphatidylinositol-3,4-bisphosphate level","synonyms":[{"name":"increased cellular 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate level","type":"exact"},{"name":"increased cellular PI(3,4)P2 level","type":"exact"},{"name":"increased cellular phosphatidylinositol-3,4-bisphosphate level during mitotic cell cycle","type":"related"},{"name":"increased cellular phosphatidylinositol-3,4-bisphosphate level during vegetative growth","type":"exact"}],"termid":"FYPO:0006487"}


id: GO:0071906
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CRD (context dependent regulatory) domain, a domain of about 130 residues that is the most divergent region among the LEF/TCF proteins.","definition_xrefs":["GOC:yaf","PMID:19460168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"CRD domain binding","synonyms":[{"name":"context dependent regulatory domain binding","type":"exact"}],"termid":"GO:0071906"}


id: PBO:0090395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, G-patch type, splicing factor 45 ortholog","termid":"PBO:0090395"}


id: FYPO:0007409
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which alternative polyadenylation of mRNA is abnormal. mRNA alternative polyadenylation generates mRNA molecules with variable 3'-end lengths from a given pre-mRNA by differential use of cleavage and polyadenylation signals. Includes differences in the relative usage levels of alternative polyadenylation sites.","definition_xrefs":["GO:0110104","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA alternative polyadenylation","termid":"FYPO:0007919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0000294","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mRNA alternative polyadenylation","synonyms":[{"name":"abnormal mRNA alternative polyadenylation during mitotic cell cycle","type":"related"},{"name":"abnormal mRNA alternative polyadenylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007409"}


id: PR:000027557
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A.2 phosphorylated 2 in Schizosaccharomyces pombe. Example: UniProtKB:P04910-1, Ser-122, MOD:00046.","definition_xrefs":["PomBase:MAH","PMID:19965387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A-beta (Schizosaccharomyces pombe 972h-)","termid":"PR:P04910"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hta2/Phos:(S121)","pombase_gene_id":"SPAC19G12.06c","synonyms":[{"name":"PomBase_original_PRO_term_name: histone H2A.2 phosphorylated 2 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-HTA2/Phos:2","type":"exact"},{"name":"hta2/Phos:(S121)","type":"exact"},{"name":"hta2/Phos:(S122)","type":"exact"}],"termid":"PR:000027557"}


id: RO:HOM0000007
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Homology that is defined by common descent.","definition_xrefs":["ISBN:0123195837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_homology_relationship_with","termid":"RO:HOM0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_historical_homology_relationship_with","synonyms":[{"name":"cladistic homology","type":"exact"},{"name":"historical homologous to","type":"exact"},{"name":"homology","type":"broad"},{"name":"phylogenetic homology","type":"exact"},{"name":"taxic homology","type":"exact"},{"name":"true homology","type":"related"}],"termid":"RO:HOM0000007"}


id: PBO:0068617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 69, pseudogene","termid":"PBO:0068617"}


id: PBO:0058049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4270","termid":"PBO:0058049"}


id: MOD:00041
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to L-gamma-carboxyglutamic acid.","definition_xrefs":["PubMed:3263814","OMSSA:48","DeltaMass:217","PubMed:10517147","PubMed:4528109","PubMed:8868490","PubMed:9188685","RESID:AA0032","Unimod:299#E","PubMed:8135347","PubMed:7457858","PubMed:1807167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"},{"relation_name":"is_a","term_name":"carboxylated residue","termid":"MOD:01152"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-gamma-carboxyglutamic acid","synonyms":[{"name":"(3S)-3-aminopropane-1,1,3-tricarboxylic acid","type":"exact"},{"name":"(3S)-3-azanylpropane-1,1,3-tricarboxylic acid","type":"exact"},{"name":"1-carboxyglutamic acid","type":"related"},{"name":"3-amino-1,1,3-propanetricarboxylic acid","type":"exact"},{"name":"3-azanylpropane-1,1,3-tricarboxylic acid","type":"exact"},{"name":"4-carboxyglutamic acid","type":"exact"},{"name":"4CbxGlu","type":"exact"},{"name":"Carboxy","type":"related"},{"name":"Carboxy Glutamyl","type":"exact"},{"name":"Carboxylation","type":"related"},{"name":"L-gamma-carboxyglutamic acid","type":"exact"},{"name":"MOD_RES 4-carboxyglutamate","type":"exact"},{"name":"gamma-carboxylated L-glutamic acid","type":"exact"},{"name":"gammacarboxyle","type":"exact"}],"termid":"MOD:00041"}


id: MOD:00625
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-methylmaleimide derivatized residue","synonyms":[{"name":"Nmethylmaleimide","type":"related"}],"termid":"MOD:00625"}


id: PBO:0086689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; includes a potential transmembrane domain; deletion results in slightly lengthened telomeres; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively","termid":"PBO:0086689"}


id: GO:0001630
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete GP40-like receptor activity (obsolete GO:0001630)","synonyms":[{"name":"GP40-like receptor activity","type":"exact"}],"termid":"GO:0001630"}


id: GO:0045953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of natural killer mediated cytotoxicity.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte mediated cytotoxicity","termid":"GO:0001911"},{"relation_name":"is_a","term_name":"negative regulation of natural killer cell mediated immunity","termid":"GO:0002716"},{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated cytotoxicity","termid":"GO:0042269"},{"relation_name":"negatively_regulates","term_name":"natural killer cell mediated cytotoxicity","termid":"GO:0042267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell mediated cytotoxicity","synonyms":[{"name":"down regulation of natural killer cell mediated cytotoxicity","type":"exact"},{"name":"down-regulation of natural killer cell mediated cytotoxicity","type":"exact"},{"name":"downregulation of natural killer cell mediated cytotoxicity","type":"exact"},{"name":"inhibition of natural killer cell mediated cytotoxicity","type":"narrow"},{"name":"negative regulation of NK cell mediated cell death","type":"exact"},{"name":"negative regulation of NK cell mediated cell killing","type":"exact"},{"name":"negative regulation of NK cell mediated cytolysis","type":"related"},{"name":"negative regulation of NK cell mediated cytotoxicity","type":"exact"},{"name":"negative regulation of natural killer cell mediated cell death","type":"exact"},{"name":"negative regulation of natural killer cell mediated cell killing","type":"exact"},{"name":"negative regulation of natural killer cell mediated cytolysis","type":"related"}],"termid":"GO:0045953"}


id: GO:0005804
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete secretory vesicle membrane (obsolete GO:0005804)","synonyms":[{"name":"secretory vesicle membrane","type":"exact"}],"termid":"GO:0005804"}


id: PATO:0000284
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000284 germ line dependent fertility (obsolete PATO:0000284)","termid":"PATO:0000284"}


id: GO:0097632
data:
  {"annotated_genes":["SJAG_02699"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90681],"is_not":false,"summary":null,"term":"GO:0097632"}]},"cv_name":"cellular_component","definition":"The component of the phagophore assembly site membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"phagophore assembly site membrane","termid":"GO:0034045"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0000407"}],"interesting_parent_ids":["GO:0000407","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of phagophore assembly site membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"extrinsic component of pre-autophagosomal structure membrane","type":"narrow"},{"name":"extrinsic to phagophore assembly site membrane","type":"exact"},{"name":"phagophore assembly site peripheral membrane","type":"related"}],"termid":"GO:0097632","terms_by_termid":{"GO:0097632":null}}


id: GO:0051419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to nebulin, a large protein (approximately 800kD) that is anchored at the Z-disc by its C-terminal region and spans the length of the thin filament, ending at the edge of the H-zone.","definition_xrefs":["PMID:11699871"],"gene_count":0,"genotype_count":0,"name":"obsolete nebulin binding (obsolete GO:0051419)","synonyms":[{"name":"nebulin binding","type":"exact"}],"termid":"GO:0051419"}


id: PBO:0109371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 6","termid":"PBO:0109371"}


id: GO:0018916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nitrobenzene (nitrobenzol), a derivative of benzene with an NO2 group attached to the ring. It is a yellow aromatic liquid used in perfumery and manufactured in large quantities in the preparation of aniline.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nitrobenzene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:nb"],"synonyms":[{"name":"nitrobenzene metabolism","type":"exact"}],"termid":"GO:0018916"}


id: PBO:0027322
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cytochrome-c_oxidase_activity","termid":"PBO:0027322"}


id: FYPO:0001311
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which plasmids are lost at a lower frequency than normal. Plasmid loss occurs when one or both daughter cells do not inherit copies of a plasmid from the mother cell, and may result from failure of plasmid replication or segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased plasmid loss","synonyms":[{"name":"decreased plasmid loss during mitotic cell cycle","type":"related"},{"name":"decreased plasmid loss during vegetative growth","type":"exact"},{"name":"reduced plasmid loss","type":"exact"}],"termid":"FYPO:0001311"}


id: GO:0001064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains a single-subunit-type RNA polymerase-specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed 5'-3' RNA polymerase activity","termid":"GO:0003899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016779","GO:0003824","GO:0016740","GO:0140098"],"is_obsolete":false,"name":"single subunit type RNA polymerase activity","synonyms":[{"name":"T3/T7 type RNA polymerase activity","type":"exact"}],"termid":"GO:0001064"}


id: GO:0006058
data:
  {"annotated_genes":["SJAG_01858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89600],"is_not":false,"summary":null,"term":"GO:0006058"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a mannoprotein, a protein that contains covalently bound mannose residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannoprotein metabolic process","termid":"GO:0006056"},{"relation_name":"is_a","term_name":"glycoprotein catabolic process","termid":"GO:0006516"},{"relation_name":"is_a","term_name":"proteolysis involved in protein catabolic process","termid":"GO:0051603"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01858":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"mannoprotein catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mannoprotein breakdown","type":"exact"},{"name":"mannoprotein catabolism","type":"exact"},{"name":"mannoprotein degradation","type":"exact"}],"termid":"GO:0006058","terms_by_termid":{"GO:0006058":null}}


id: FYPO:0007855
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during mitotic spindle assembly checkpoint signaling.","definition_xrefs":["PMID:12606573","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0002494","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein phosphorylation during mitotic spindle assembly checkpoint signaling","synonyms":[{"name":"increased duration of protein localisation to spindle during meiosis I","type":"exact"},{"name":"increased duration of protein localization to meiosis I spindle","type":"exact"},{"name":"increased duration of protein localization to meiotic spindle during meiosis I","type":"exact"},{"name":"increased duration of protein localization to spindle during first meiotic nuclear division","type":"exact"},{"name":"prolonged protein localization to spindle during meiosis I","type":"exact"}],"termid":"FYPO:0007855"}


id: GO:0030951
data:
  {"annotated_genes":["SJAG_02624","SJAG_03540","SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95279,114210,114727],"is_not":false,"summary":null,"term":"GO:0030951"}]},"cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of polarized microtubule-based cytoskeletal structures.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"is_a","term_name":"establishment or maintenance of cytoskeleton polarity","termid":"GO:0030952"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01613":null,"SJAG_02624":null,"SJAG_03540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0007163","GO:0000226"],"is_obsolete":false,"name":"establishment or maintenance of microtubule cytoskeleton polarity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030951","terms_by_termid":{"GO:0030951":null}}


id: GO:0102427
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: allocryptopine + NADPH + O2 + H+ = 6-hydroxy-allocryptopine + NADP + H2O.","definition_xrefs":["GOC:pz","EC:1.14.13.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"allocryptopine 6-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-13828"],"termid":"GO:0102427"}


id: PBO:0076180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 4A member 1","termid":"PBO:0076180"}


id: PBO:0045171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A1 pseudogene 5","termid":"PBO:0045171"}


id: FYPO:0003965
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a glutathione disulfide oxidoreductase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal glutathione disulfide oxidoreductase activity","termid":"FYPO:0003963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"increased glutathione disulfide oxidoreductase activity","termid":"FYPO:0003965"}


id: PBO:0090247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II CTD phosphatase Ssu72","termid":"PBO:0090247"}


id: GO:0060379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a cardiac myoblast. A cardiac myoblast is a precursor cell that has been committed to a cardiac muscle cell fate but retains the ability to divide and proliferate throughout life.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardioblast differentiation","termid":"GO:0010002"},{"relation_name":"is_a","term_name":"myoblast differentiation","termid":"GO:0045445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle cell myoblast differentiation","synonyms":[{"name":"cardiac myoblast differentiation","type":"related"},{"name":"myocardial precursor cell differentiation","type":"exact"}],"termid":"GO:0060379"}


id: PBO:0036040
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_SRP-dependent_cotranslational_protein_targeting_to_membrane_during_vegetative_growth","termid":"PBO:0036040"}


id: PBO:0003531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tspO homolog/ peripheral benzodiazepine receptor homolog, involved in the transport cytoplas/mitochondrial of haem (predicted)","termid":"PBO:0003531"}


id: PR:O74329
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 40S ribosomal protein S29 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02488","PANTHER:PTHR12010:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S29 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.09","secondary_identifiers":["UniProtKB:O74329"],"synonyms":[{"name":"Spom972h-RPS29","type":"exact"}],"termid":"PR:O74329"}


id: PBO:0078298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-3","termid":"PBO:0078298"}


id: PBO:0046728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"envoplakin","termid":"PBO:0046728"}


id: FYPO:0001580
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing leucine as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0002058","FYPO:0000139","FYPO:0000003","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on leucine nitrogen source","synonyms":[{"name":"normal cell population growth on leucine nitrogen source","type":"exact"},{"name":"normal cell population growth on monomeric leucine nitrogen source","type":"exact"},{"name":"normal leucine utilization","type":"related"},{"name":"normal monomeric leucine utilization","type":"related"},{"name":"normal vegetative cell population growth on leucine nitrogen source","type":"exact"}],"termid":"FYPO:0001580"}


id: PBO:0082856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of transport protein particle (TRAPP) complexes I-III; TRAPP complexes are related multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII); human homolog is TRAPPC4","termid":"PBO:0082856"}


id: PBO:0076437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 13","termid":"PBO:0076437"}


id: PBO:0076537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 64 pseudogene","termid":"PBO:0076537"}


id: PBO:0049595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 13","termid":"PBO:0049595"}


id: PR:P40374
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- his5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40374"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imidazoleglycerol-phosphate dehydratase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21H7.07c","synonyms":[{"name":"IGPD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-his5","type":"exact"}],"termid":"PR:P40374"}


id: FYPO:0005898
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is increased during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0005306"},{"relation_name":"is_a","term_name":"increased protein localization to chromatin during mitotic G1 phase","termid":"FYPO:0005897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to centromeric chromatin during mitotic G1 phase","synonyms":[{"name":"increased protein localisation to centromeric chromatin during mitotic G1 phase","type":"exact"},{"name":"increased protein localization to centromeric chromatin during G1 phase during vegetative growth","type":"exact"},{"name":"increased protein localization to centromeric chromatin during G1 phase of mitotic cell cycle","type":"related"}],"termid":"FYPO:0005898"}


id: GO:1903288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of potassium ion import across the plasma membrane.","definition_xrefs":["PMID:10636900","GO_REF:0000058","GOC:mtg_cardiac_conduct_nov11","GOC:BHF","GOC:rl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of potassium ion transmembrane transport","termid":"GO:1901381"},{"relation_name":"is_a","term_name":"regulation of potassium ion import","termid":"GO:1903286"},{"relation_name":"positively_regulates","term_name":"potassium ion import across plasma membrane","termid":"GO:1990573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of potassium ion import across plasma membrane","synonyms":[{"name":"activation of potassium import","type":"narrow"},{"name":"activation of potassium ion import","type":"narrow"},{"name":"activation of potassium ion uptake","type":"narrow"},{"name":"positive regulation of potassium import","type":"exact"},{"name":"positive regulation of potassium ion import","type":"broad"},{"name":"positive regulation of potassium ion uptake","type":"exact"},{"name":"up regulation of potassium import","type":"exact"},{"name":"up regulation of potassium ion import","type":"exact"},{"name":"up regulation of potassium ion uptake","type":"exact"},{"name":"up-regulation of potassium import","type":"exact"},{"name":"up-regulation of potassium ion import","type":"exact"},{"name":"up-regulation of potassium ion uptake","type":"exact"},{"name":"upregulation of potassium import","type":"exact"},{"name":"upregulation of potassium ion import","type":"exact"},{"name":"upregulation of potassium ion uptake","type":"exact"}],"termid":"GO:1903288"}


id: PBO:0046033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit 2 beta pseudogene 1","termid":"PBO:0046033"}


id: PBO:0057432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 550b-2","termid":"PBO:0057432"}


id: GO:0102091
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a 1-phosphatidyl-1D-myo-inositol 5-phosphate = an 1-phosphatidyl-1D-myo-inositol + phosphate.","definition_xrefs":["GOC:pz","PMID:12878591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol monophosphate phosphatase activity","termid":"GO:0052744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"phosphatidylinositol-5-phosphate phosphatase activity","secondary_identifiers":["MetaCyc:RXN-10962"],"synonyms":[{"name":"phosphatidylinositol-5-phosphate 5-phosphatase activity","type":"exact"}],"termid":"GO:0102091"}


id: PBO:0018258
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"the misfolded product of the Parkinson-linked allele L169P is degraded by the proteasome","termid":"PBO:0018258"}


id: GO:1903117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of actin filament organization involved in cytokinetic actomyosin contractile ring assembly.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24798735"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of actin filament organization involved in cytokinetic actomyosin contractile ring assembly (obsolete GO:1903117)","synonyms":[{"name":"regulation of actin filament organisation of constriction ring assembly","type":"related"},{"name":"regulation of actin filament organisation of contractile ring assembly","type":"exact"},{"name":"regulation of actin filament organisation of cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"regulation of actin filament organisation of cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"regulation of actin filament organisation of cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"regulation of actin filament organisation of cytokinesis, actomyosin ring formation","type":"related"},{"name":"regulation of actin filament organisation of cytokinesis, contractile ring assembly","type":"related"},{"name":"regulation of actin filament organization of constriction ring assembly","type":"related"},{"name":"regulation of actin filament organization of contractile ring assembly","type":"exact"},{"name":"regulation of actin filament organization of cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"regulation of actin filament organization of cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"regulation of actin filament organization of cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"regulation of actin filament organization of cytokinesis, actomyosin ring formation","type":"related"},{"name":"regulation of actin filament organization of cytokinesis, contractile ring assembly","type":"related"},{"name":"regulation of regulation of actin filament localization of constriction ring assembly","type":"related"},{"name":"regulation of regulation of actin filament localization of contractile ring assembly","type":"related"},{"name":"regulation of regulation of actin filament localization of cytokinesis, actomyosin contractile ring assembly","type":"related"},{"name":"regulation of regulation of actin filament localization of cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"regulation of regulation of actin filament localization of cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"regulation of regulation of actin filament localization of cytokinesis, actomyosin ring formation","type":"related"},{"name":"regulation of regulation of actin filament localization of cytokinesis, contractile ring assembly","type":"related"}],"termid":"GO:1903117"}


id: PBO:0043290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 9A","termid":"PBO:0043290"}


id: PBO:0071672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 4","termid":"PBO:0071672"}


id: FYPO:0006133
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phytosphingosine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular phytosphingosine level","synonyms":[{"name":"increased cellular phytosphingosine level during mitotic cell cycle","type":"related"},{"name":"increased cellular phytosphingosine level during vegetative growth","type":"exact"},{"name":"increased phytosphingosine accumulation","type":"related"}],"termid":"FYPO:0006133"}


