# terms

id: PBO:0079169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocator protein 2","termid":"PBO:0079169"}


id: PBO:0071595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 12","termid":"PBO:0071595"}


id: PBO:0061606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleobindin 2","termid":"PBO:0061606"}


id: GO:0036265
data:
  {"annotated_genes":["SJAG_02281","SJAG_04680","SJAG_04034","SJAG_04848","SJAG_04890"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106005"},{"annotations":[74381,90957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070476"},{"annotations":[111784,115055,58442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106004"}]},"cv_name":"biological_process","definition":"The addition of a methyl group to the N7 atom in the base portion of a guanine nucleotide residue in an RNA molecule.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA methylation","termid":"GO:0001510"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02281":null,"SJAG_04034":null,"SJAG_04680":null,"SJAG_04848":null,"SJAG_04890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA (guanine-N7)-methylation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0036265","terms_by_termid":{"GO:0070476":null,"GO:0106004":null,"GO:0106005":null}}


id: PATO:0001454
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity quality inhering in a bearer by virtue of the bearer's dependence on oxygen.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity toward","termid":"PATO:0000085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensitivity to oxygen","termid":"PATO:0001454"}


id: GO:0047744
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-amino-4-chloro-2-(2,3-dihydroxyphenyl)pyridazin-3(2H)-one + O2 = 5-amino-4-chloro-2-(2-hydroxymuconoyl)pyridazin-3(2H)-one + 2 H+.","definition_xrefs":["RHEA:20449","EC:1.13.11.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"chloridazon-catechol dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R04602","MetaCyc:CHLORIDAZON-CATECHOL-DIOXYGENASE-RXN"],"synonyms":[{"name":"5-amino-4-chloro-2-(2,3-dihydroxyphenyl)-3(2H)-pyridazinone 1,2-oxidoreductase (decyclizing)","type":"related"}],"termid":"GO:0047744"}


id: PBO:0039143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 2","termid":"PBO:0039143"}


id: GO:1904369
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sclerenchyma cell differentiation.","definition_xrefs":["PMID:26025534","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of sclerenchyma cell differentiation","termid":"GO:1904368"},{"relation_name":"positively_regulates","term_name":"sclerenchyma cell differentiation","termid":"GO:0014001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sclerenchyma cell differentiation","synonyms":[{"name":"up regulation of sclerenchyma cell differentiation","type":"exact"},{"name":"up-regulation of sclerenchyma cell differentiation","type":"exact"},{"name":"upregulation of sclerenchyma cell differentiation","type":"exact"}],"termid":"GO:1904369"}


id: PR:P78798
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisomal targeting signal 2 receptor that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01952","PANTHER:PTHR22850:SF4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal targeting signal 2 receptor (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17D4.01","secondary_identifiers":["UniProtKB:P78798"],"synonyms":[{"name":"PTS2 receptor (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PEX7","type":"exact"},{"name":"peroxin-7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78798"}


id: FYPO:0006582
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity","termid":"FYPO:0004644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"decreased bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity","synonyms":[{"name":"reduced bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity","type":"exact"}],"termid":"FYPO:0006582"}


id: PBO:0001047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Tsr1 (predicted)","termid":"PBO:0001047"}


id: GO:0052640
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: salicylic acid + UDP-glucose = salicylic acid 2-O-glucoside + UDP.","definition_xrefs":["MetaCyc:RXN-11658","RHEA:62312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"salicylic acid glucosyltransferase (glucoside-forming) activity","synonyms":[{"name":"UDP:glucose:2-hydroxybenzoic acid glucosyltransferase (glucoside-forming) activity","type":"exact"},{"name":"UDP:glucose:SA glucosyltransferase (glucoside-forming) activity","type":"exact"},{"name":"UDP:glucose:salicylate glucosyltransferase (glucoside-forming) activity","type":"exact"},{"name":"UDP:glucose:salicylic acid glucosyltransferase (glucoside-forming) activity","type":"exact"},{"name":"salicylic acid glucosyltransferase activity","type":"broad"}],"termid":"GO:0052640"}


id: GO:1905166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lysosomal protein catabolic process.","definition_xrefs":["GOC:bf","GOC:PARL","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein catabolic process in the vacuole","termid":"GO:1904351"},{"relation_name":"is_a","term_name":"regulation of lysosomal protein catabolic process","termid":"GO:1905165"},{"relation_name":"negatively_regulates","term_name":"lysosomal protein catabolic process","termid":"GO:1905146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0030163"},{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"negative regulation of lysosomal protein catabolic process","synonyms":[{"name":"down regulation of cellular protein breakdown in lysosome","type":"exact"},{"name":"down regulation of cellular protein catabolic process in lysosome","type":"exact"},{"name":"down regulation of cellular protein catabolism in lysosome","type":"exact"},{"name":"down regulation of cellular protein degradation in lysosome","type":"exact"},{"name":"down regulation of lysosomal protein catabolic process","type":"exact"},{"name":"down regulation of lysosomal protein catabolism","type":"exact"},{"name":"down regulation of lysosomal protein degradation","type":"exact"},{"name":"down regulation of lysosomal proteolysis","type":"related"},{"name":"down regulation of proteolysis within lysosome","type":"related"},{"name":"down-regulation of cellular protein breakdown in lysosome","type":"exact"},{"name":"down-regulation of cellular protein catabolic process in lysosome","type":"exact"},{"name":"down-regulation of cellular protein catabolism in lysosome","type":"exact"},{"name":"down-regulation of cellular protein degradation in lysosome","type":"exact"},{"name":"down-regulation of lysosomal protein catabolic process","type":"exact"},{"name":"down-regulation of lysosomal protein catabolism","type":"exact"},{"name":"down-regulation of lysosomal protein degradation","type":"exact"},{"name":"down-regulation of lysosomal proteolysis","type":"related"},{"name":"down-regulation of proteolysis within lysosome","type":"related"},{"name":"downregulation of cellular protein breakdown in lysosome","type":"exact"},{"name":"downregulation of cellular protein catabolic process in lysosome","type":"exact"},{"name":"downregulation of cellular protein catabolism in lysosome","type":"exact"},{"name":"downregulation of cellular protein degradation in lysosome","type":"exact"},{"name":"downregulation of lysosomal protein catabolic process","type":"exact"},{"name":"downregulation of lysosomal protein catabolism","type":"exact"},{"name":"downregulation of lysosomal protein degradation","type":"exact"},{"name":"downregulation of lysosomal proteolysis","type":"related"},{"name":"downregulation of proteolysis within lysosome","type":"related"},{"name":"inhibition of cellular protein breakdown in lysosome","type":"narrow"},{"name":"inhibition of cellular protein catabolic process in lysosome","type":"narrow"},{"name":"inhibition of cellular protein catabolism in lysosome","type":"narrow"},{"name":"inhibition of cellular protein degradation in lysosome","type":"narrow"},{"name":"inhibition of lysosomal protein catabolic process","type":"narrow"},{"name":"inhibition of lysosomal protein catabolism","type":"narrow"},{"name":"inhibition of lysosomal protein degradation","type":"narrow"},{"name":"inhibition of lysosomal proteolysis","type":"related"},{"name":"inhibition of proteolysis within lysosome","type":"related"},{"name":"negative regulation of cellular protein breakdown in lysosome","type":"exact"},{"name":"negative regulation of cellular protein catabolic process in lysosome","type":"exact"},{"name":"negative regulation of cellular protein catabolism in lysosome","type":"exact"},{"name":"negative regulation of cellular protein degradation in lysosome","type":"exact"},{"name":"negative regulation of lysosomal protein catabolism","type":"exact"},{"name":"negative regulation of lysosomal protein degradation","type":"exact"},{"name":"negative regulation of lysosomal proteolysis","type":"related"},{"name":"negative regulation of proteolysis within lysosome","type":"related"}],"termid":"GO:1905166"}


id: PBO:0067090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 126, pseudogene","termid":"PBO:0067090"}


id: PBO:0053589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 615","termid":"PBO:0053589"}


id: GO:1904570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of selenocysteine incorporation.","definition_xrefs":["PMID:21685449","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translational elongation","termid":"GO:0045900"},{"relation_name":"is_a","term_name":"regulation of selenocysteine incorporation","termid":"GO:1904569"},{"relation_name":"negatively_regulates","term_name":"selenocysteine incorporation","termid":"GO:0001514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of selenocysteine incorporation","synonyms":[{"name":"down regulation of selenocysteine incorporation","type":"exact"},{"name":"down-regulation of selenocysteine incorporation","type":"exact"},{"name":"downregulation of selenocysteine incorporation","type":"exact"},{"name":"inhibition of selenocysteine incorporation","type":"narrow"}],"termid":"GO:1904570"}


id: PBO:0051403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda like polypeptide 3, pseudogene","termid":"PBO:0051403"}


id: PBO:0079976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 14","termid":"PBO:0079976"}


id: PBO:0002311
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.41","termid":"PBO:0002311"}


id: GO:0009695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of jasmonic acid, a fatty acid derivative.","definition_xrefs":["PMID:33821356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"jasmonic acid metabolic process","termid":"GO:0009694"},{"relation_name":"is_a","term_name":"long-chain fatty acid biosynthetic process","termid":"GO:0042759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"jasmonic acid biosynthetic process","secondary_identifiers":["MetaCyc:PWY-735"],"synonyms":[{"name":"jasmonic acid anabolism","type":"exact"},{"name":"jasmonic acid biosynthesis","type":"exact"},{"name":"jasmonic acid formation","type":"exact"},{"name":"jasmonic acid synthesis","type":"exact"}],"termid":"GO:0009695"}


id: PBO:0054806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2219","termid":"PBO:0054806"}


id: PBO:0026716
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_ubiquitinated_protein_in_cell","termid":"PBO:0026716"}


id: GO:0035227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the activity of glutamate-cysteine ligase.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ligase activity","termid":"GO:0051340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glutamate-cysteine ligase activity","termid":"GO:0035227"}


id: GO:0071504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heparin stimulus.","definition_xrefs":["GOC:mah","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to heparin","termid":"GO:0071503"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to heparin","termid":"GO:0071504"}


id: GO:0106318
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: methane + NADPH + H+ + O2 = methanol + NADP+ + H2O.","definition_xrefs":["RHEA:13641"],"gene_count":0,"genotype_count":0,"name":"obsolete methane monooxygenase NADPH activity (obsolete GO:0106318)","termid":"GO:0106318"}


id: PBO:0076813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teneurin transmembrane protein 1","termid":"PBO:0076813"}


id: GO:0035881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an amacrine cell, an interneuron generated in the inner nuclear layer (INL) of the vertebrate retina. Amacrine cells integrate, modulate, and interpose a temporal domain in the visual message presented to the retinal ganglion cells, with which they synapse in the inner plexiform layer. Amacrine cells lack large axons.","definition_xrefs":["GOC:bf","CL:0000561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"},{"relation_name":"part_of","term_name":"neural retina development","termid":"GO:0003407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amacrine cell differentiation","synonyms":[{"name":"amacrine neuron differentiation","type":"exact"}],"termid":"GO:0035881"}


id: PBO:0081987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 16","termid":"PBO:0081987"}


id: PBO:0078404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma locus antisense RNA 1","termid":"PBO:0078404"}


id: GO:0099604
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ions by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium channel activity","termid":"GO:0005262"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ligand-gated calcium channel activity","termid":"GO:0099604"}


id: PBO:0049001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphocholine phosphodiesterase 1","termid":"PBO:0049001"}


id: GO:0140103
data:
  {"annotated_genes":["SJAG_00183"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047220"}]},"cv_name":"molecular_function","definition":"Catalysis of a biochemical reaction at physiological temperatures in which one of the substrates is a glycoprotein.","definition_xrefs":["GOC:molecular_function_refactoring","GOC:pdt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"catalytic activity, acting on a glycoprotein","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140103","terms_by_termid":{"GO:0047220":null}}


id: GO:1990542
data:
  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process in which a solute is transported from one side of a membrane to the other into, out of or within a mitochondrion.","definition_xrefs":["PMID:20533899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial transport","termid":"GO:0006839"},{"relation_name":"is_a","term_name":"transmembrane 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transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:1990542","terms_by_termid":{"GO:0006843":null,"GO:0006850":null,"GO:0016031":null,"GO:0030150":null,"GO:0036444":null,"GO:0043490":null,"GO:0045016":null,"GO:0045041":null,"GO:0048250":null,"GO:0110141":null,"GO:0140021":null,"GO:0140140":null,"GO:0140141":null,"GO:0140300":null,"GO:0140466":null,"GO:0160007":null,"GO:0170046":null,"GO:1904947":null,"GO:1904983":null,"GO:1990519":null,"GO:1990542":null,"GO:1990543":null,"GO:1990544":null,"GO:1990545":null,"GO:1990547":null,"GO:1990548":null,"GO:1990549":null,"GO:1990550":null,"GO:1990551":null,"GO:1990553":null,"GO:1990554":null,"GO:1990555":null,"GO:1990556":null,"GO:1990557":null,"GO:1990559":null,"GO:1990575":null,"GO:1990616":null}}


id: GO:0022894
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of potassium by a channel with a unit conductance of 20 to 85 picoSiemens that opens in response to stimulus by internal calcium ions. Intermediate conductance calcium-activated potassium channels are more sensitive to calcium than are large conductance calcium-activated potassium channels. Transport by a channel involves catalysis of facilitated diffusion of a solute (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel, without evidence for a carrier-mediated mechanism.","definition_xrefs":["GOC:mtg_transport","OMIM:602754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-activated potassium channel activity","termid":"GO:0015269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"intermediate conductance calcium-activated potassium channel activity","synonyms":[{"name":"IK KCa channels","type":"exact"},{"name":"IK calcium-activated potassium channel activity","type":"exact"},{"name":"intermdiate conductance KCa channels","type":"exact"}],"termid":"GO:0022894"}


id: GO:0048152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of S100 beta protein. S100 is a small calcium and zinc binding protein produced in astrocytes that is implicated in Alzheimer's disease, Down Syndrome and ALS.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete S100 beta biosynthetic process (obsolete GO:0048152)","synonyms":[{"name":"S100 beta anabolism","type":"exact"},{"name":"S100 beta biosynthesis","type":"exact"},{"name":"S100 beta formation","type":"exact"},{"name":"S100 beta synthesis","type":"exact"}],"termid":"GO:0048152"}


id: PBO:0041883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation channel sperm associated 2","termid":"PBO:0041883"}


id: PBO:0090467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit Pfd5","termid":"PBO:0090467"}


id: FYPO:0002235
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more sterol esters measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular sterol ester level","synonyms":[{"name":"increased cellular sterol ester level during mitotic cell cycle","type":"related"},{"name":"increased cellular sterol ester level during vegetative growth","type":"exact"},{"name":"increased sterol ester accumulation","type":"related"}],"termid":"FYPO:0002235"}


id: PR:Q10248
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4G9.20c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C4G9.20c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.20c","synonyms":[{"name":"Spom972h-SPAC4G9.20c","type":"exact"}],"termid":"PR:Q10248"}


id: GO:0006167
data:
  {"annotated_genes":["SJAG_02850","SJAG_01070","SJAG_00044","SJAG_01859"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84942,99484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[112921,89589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of AMP, adenosine monophosphate.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate biosynthetic process","termid":"GO:0009168"},{"relation_name":"is_a","term_name":"AMP metabolic process","termid":"GO:0046033"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_01070":null,"SJAG_01859":null,"SJAG_02850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"AMP biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"AMP anabolism","type":"exact"},{"name":"AMP biosynthesis","type":"exact"},{"name":"AMP formation","type":"exact"},{"name":"AMP synthesis","type":"exact"}],"termid":"GO:0006167","terms_by_termid":{"GO:0044208":null,"GO:0044209":null}}


id: PBO:0031139
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring_myosin_filament_organization","termid":"PBO:0031139"}


id: GO:0042922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to one or more specific sites on a neuromedin U receptor.","definition_xrefs":["GOC:jl","PMID:10899166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"neuromedin U receptor binding","termid":"GO:0042922"}


id: PBO:0062214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AL member 1 (gene/pseudogene)","termid":"PBO:0062214"}


id: GO:1903931
data:
  {"annotated_genes":["SJAG_04712"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84523],"is_not":false,"summary":null,"term":"GO:1903931"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pyrimidine-containing compound salvage.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23695302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of cellular metabolic process","termid":"GO:0031325"},{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound metabolic process","termid":"GO:0045935"},{"relation_name":"is_a","term_name":"regulation of pyrimidine-containing compound salvage","termid":"GO:1903930"},{"relation_name":"positively_regulates","term_name":"pyrimidine-containing compound salvage","termid":"GO:0008655"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pyrimidine-containing compound salvage","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of pyrimidine salvage","type":"related"},{"name":"activation of pyrimidine-containing compound salvage","type":"narrow"},{"name":"positive regulation of pyrimidine salvage","type":"related"},{"name":"up regulation of pyrimidine salvage","type":"related"},{"name":"up regulation of pyrimidine-containing compound salvage","type":"exact"},{"name":"up-regulation of pyrimidine salvage","type":"related"},{"name":"up-regulation of pyrimidine-containing compound salvage","type":"exact"},{"name":"upregulation of pyrimidine salvage","type":"related"},{"name":"upregulation of pyrimidine-containing compound salvage","type":"exact"}],"termid":"GO:1903931","terms_by_termid":{"GO:1903931":null}}


id: PATO:0002268
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being located in a position equidistant from edges.","definition_xrefs":["PATOC:OREGON"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centered","termid":"PATO:0002268"}


id: GO:1903538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of meiotic cell cycle process involved in oocyte maturation.","definition_xrefs":["PMID:25212395","GOC:jz","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"meiotic cell cycle process involved in oocyte maturation","termid":"GO:1903537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of meiotic cell cycle process involved in oocyte maturation","synonyms":[{"name":"regulation of meiosis involved in oocyte maturation","type":"broad"}],"termid":"GO:1903538"}


id: PBO:0056603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MDM4 pseudogene 1","termid":"PBO:0056603"}


id: GO:0046918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent attachment of a palmitoyl group to a nitrogen (N) atom in an N-terminal glycine residue to form N-palmitoyl-glycine.","definition_xrefs":["RESID:AA0339"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-glycine N-palmitoylation (obsolete GO:0046918)","termid":"GO:0046918"}


id: GO:0009983
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of N-terminal tyrosine from a peptide.","definition_xrefs":["ISBN:0198506732","GOC:sm"],"gene_count":0,"genotype_count":0,"name":"obsolete tyrosine aminopeptidase activity (obsolete GO:0009983)","synonyms":[{"name":"tyrosine aminopeptidase activity","type":"exact"}],"termid":"GO:0009983"}


id: GO:0019199
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: a protein + ATP = a phosphoprotein + ADP.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"},{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0140096","GO:0038023","GO:0004672","GO:0016301","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"transmembrane receptor protein kinase activity","secondary_identifiers":["Reactome:R-HSA-8983059","Reactome:R-HSA-8983063"],"termid":"GO:0019199"}


id: FYPO:0007283
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the lateral cell cortex is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:26960792","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell cortex during vegetative growth","termid":"FYPO:0001402"},{"relation_name":"is_a","term_name":"normal protein localization to cytoplasm","termid":"FYPO:0001788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to lateral cell cortex during vegetative growth","synonyms":[{"name":"normal protein localisation to lateral cell cortex during vegetative growth","type":"exact"},{"name":"normal protein localization to cell side during vegetative growth","type":"related"},{"name":"normal protein localization to lateral cell cortex during mitotic cell cycle","type":"related"},{"name":"normal protein localization to lateral cortex during vegetative growth","type":"exact"}],"termid":"FYPO:0007283"}


id: PBO:0077996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNFRSF1A associated via death domain","termid":"PBO:0077996"}


id: _global:reciprocal_of
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"q1 reciprocal_of q2 if and only if : q1 and q2 are relational qualities and a phenotype e q1 e2 mutually implies a phenotype e2 q2 e.","definition_xrefs":["PATOC:CJM"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reciprocal_of","termid":"_global:reciprocal_of"}


id: GO:0102194
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + a [protein]-N6-D-fructosyl-L-lysine = ADP + H+ + a [protein]-N6-(3-O-phospho-D-fructosyl)-L-lysine.","definition_xrefs":["GOC:pz","EC:2.7.1.171","PMID:11016445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0140096","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"protein-fructosamine 3-kinase activity","secondary_identifiers":["MetaCyc:RXN-12005","RHEA:59832","GO:0030387"],"synonyms":[{"name":"fructosamine-3-kinase activity","type":"related"}],"termid":"GO:0102194"}


id: PBO:0077191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell leukemia homeobox 2","termid":"PBO:0077191"}


id: PBO:0006227
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA level","termid":"PBO:0006227"}


id: FYPO:0003314
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the activation of monopolar cell growth occurs at the new end of the cell, instead of at the old end, following cell division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal activation of monopolar cell growth","termid":"FYPO:0001393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"activation of monopolar cell growth at new end","synonyms":[{"name":"abnormal initiation of growth from new end following cell division","type":"exact"},{"name":"activation of monopolar vegetative cell growth at new end","type":"exact"}],"termid":"FYPO:0003314"}


id: PBO:0029619
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_ATP-dependent_3'-5'_DNA_helicase_activity","termid":"PBO:0029619"}


id: GO:0061274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesonephric distal tubule over time, from its formation to the mature structure. The mesonephric distal tubule is a mesonephric nephron tubule that begins at the terminal segment of the proximal tubule and ends at the mesonephric connecting tubule.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric nephron tubule development","termid":"GO:0061242"},{"relation_name":"is_a","term_name":"distal tubule development","termid":"GO:0072017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric distal tubule development","termid":"GO:0061274"}


id: PBO:0031851
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_export_from_nucleus","termid":"PBO:0031851"}


id: PBO:0109366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 3B","termid":"PBO:0109366"}


id: PR:Q9Y7K8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Nogo-B receptor that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21528:SF0","PRO:DNx","OMA:SCHPO03491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrodolichyl diphosphate syntase complex subunit nus1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.06c","secondary_identifiers":["UniProtKB:Q9Y7K8"],"synonyms":[{"name":"Spom972h-NUS1","type":"exact"},{"name":"UDS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"di-trans,poly-cis-decaprenylcistransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"undecaprenyl diphosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7K8"}


id: PBO:0028223
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_splice_site_specificity","termid":"PBO:0028223"}


id: PATO:0000996
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000996 absolute viscosity value (obsolete PATO:0000996)","termid":"PATO:0000996"}


id: GO:0097027
data:
  {"annotated_genes":["SJAG_00071","SJAG_01051","SJAG_03858","SJAG_04428","SJAG_03809","SJAG_00666","SJAG_04853"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94636,113232],"is_not":false,"summary":null,"term":"GO:0097027"},{"annotations":[111013,85011,84753,96201,98356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990757"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a ubiquitin-protein transferase.","definition_xrefs":["PMID:18321851","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"is_a","term_name":"ubiquitin-protein transferase regulator activity","termid":"GO:0055106"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00666":null,"SJAG_01051":null,"SJAG_03809":null,"SJAG_03858":null,"SJAG_04428":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0140677","GO:0030234"],"is_obsolete":false,"name":"ubiquitin-protein transferase activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097027","terms_by_termid":{"GO:0097027":null,"GO:1990757":null}}


id: PBO:0078308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (GTC) 4-1","termid":"PBO:0078308"}


id: PBO:0087787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfite reductase beta subunit; involved in amino acid biosynthesis, transcription repressed by methionine","termid":"PBO:0087787"}


id: FYPO:0006503
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the actin fusion focus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein transport","termid":"FYPO:0005744"},{"relation_name":"is_a","term_name":"abnormal protein localization during mating","termid":"FYPO:0005989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abnormal protein localization to actin fusion focus","synonyms":[{"name":"abnormal protein localisation to actin fusion focus","type":"exact"}],"termid":"FYPO:0006503"}


id: PBO:0029486
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_ergosterol_level","termid":"PBO:0029486"}


id: PBO:0065457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit ubiquitin receptor, non-ATPase 4","termid":"PBO:0065457"}


id: PBO:0087412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit 2 of ubiquinol cytochrome-c reductase (Complex III); Complex III is a component of the mitochondrial inner membrane electron transport chain; phosphorylated; transcription is regulated by Hap1p, Hap2p/Hap3p, and heme","termid":"PBO:0087412"}


id: GO:0006769
data:
  {"annotated_genes":["SJAG_01425"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96673],"is_not":false,"summary":null,"term":"GO:0006769"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving nicotinamide, pyridine-3-carboxamide, the amide of nicotinic acid. It is a member of the B complex of vitamins and occurs widely in living organisms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water-soluble vitamin metabolic process","termid":"GO:0006767"},{"relation_name":"is_a","term_name":"alkaloid metabolic process","termid":"GO:0009820"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"nicotinamide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-5083"],"synonyms":[{"name":"niacin metabolic process","type":"related"},{"name":"niacin metabolism","type":"related"},{"name":"nicotinamide metabolism","type":"exact"},{"name":"vitamin B3 metabolic process","type":"broad"},{"name":"vitamin B3 metabolism","type":"broad"}],"termid":"GO:0006769","terms_by_termid":{"GO:0006769":null}}


id: FYPO:0004221
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 20 of histone H4 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H4-K20 methylation during vegetative growth","termid":"FYPO:0004219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H4-K20 dimethylation during vegetative growth","synonyms":[{"name":"normal histone H4 K20 dimethylation during vegetative growth","type":"exact"},{"name":"normal histone H4-K20 dimethylation during mitotic cell cycle","type":"related"},{"name":"normal histone H4K20me2 during vegetative growth","type":"exact"},{"name":"normal histone lysine H4 K20 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004221"}


id: SO:0001458
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of transcribed_cluster defined by a set of transcribed sequences from the a unique gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcribed_cluster","termid":"SO:0001457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unigene_cluster","synonyms":[{"name":"unigene cluster","type":"related"}],"termid":"SO:0001458"}


id: PBO:0049151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase 8 (putative)","termid":"PBO:0049151"}


id: PBO:0066623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIC3 divergent transcript","termid":"PBO:0066623"}


id: GO:0060797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by an extracellular ligand binding to a transforming growth factor beta receptor on the surface of a target cell, which contributes to an unspecified cell adopting a mesoderm fate.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor signaling pathway involved in primary germ layer cell fate commitment (obsolete GO:0060797)","synonyms":[{"name":"transforming growth factor beta receptor signalling pathway involved in primary germ layer cell fate commitment","type":"exact"}],"termid":"GO:0060797"}


id: PATO:0000128
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer that has mass near a gravitational body.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Weight"],"direct_ancestors":[{"relation_name":"is_a","term_name":"force","termid":"PATO:0001035"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"weight","termid":"PATO:0000128"}


id: PBO:0056293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monoamine oxidase B","termid":"PBO:0056293"}


id: PR:000027720
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonucleoside-diphosphate reductase complex in Schizosaccharomyces pombe that is composed of two small (suc22) subunits and two large (cdc22) subunits.","definition_xrefs":["PRO:CNA","PMID:8479429","PMID:20516199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase complex (Schizosaccharomyces pombe)","synonyms":[{"name":"fission yeast RNR","type":"exact"},{"name":"fission yeast ribonucleotide reductase complex","type":"exact"}],"termid":"PR:000027720"}


id: PBO:0039379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine monophosphate deaminase 2","termid":"PBO:0039379"}


id: PBO:0067817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 119","termid":"PBO:0067817"}


id: PBO:0075598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPNS lysolipid transporter 2, sphingosine-1-phosphate","termid":"PBO:0075598"}


id: PBO:0064466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta 3, accessory subunit","termid":"PBO:0064466"}


id: PBO:0090264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP for Rho1, Rga1","termid":"PBO:0090264"}


id: PBO:0058479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5586","termid":"PBO:0058479"}


id: PBO:0085801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; contains transmembrane domains; involved in secretion of proteins that lack classical secretory signal sequences; component of the detergent-insoluble glycolipid-enriched complexes (DIGs); NCE102 has a paralog, FHN1, that arose from the whole genome duplication","termid":"PBO:0085801"}


id: PR:Q9C0X0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC29A3.21 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0X0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29A3.21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.21","synonyms":[{"name":"Spom972h-SPBC29A3.21","type":"exact"}],"termid":"PR:Q9C0X0"}


id: FYPO:0001501
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to brefeldin A. Cells stop growing (and may die) at a concentration of brefeldin A that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002683","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to brefeldin A","synonyms":[{"name":"hypersensitive to brefeldin A","type":"exact"},{"name":"sensitive to BFA","type":"exact"},{"name":"sensitive to brefeldin A during mitotic cell cycle","type":"related"},{"name":"sensitive to brefeldin A during vegetative growth","type":"exact"}],"termid":"FYPO:0001501"}


id: PBO:0086189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein similar to GDP/GTP exchange factors; without detectable GEF activity; required for asymmetric localization of Bfa1p at daughter-directed spindle pole bodies and for mitotic exit at low temperatures","termid":"PBO:0086189"}


id: GO:0051308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which paired chromosomes are physically detached from each other during male meiosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male meiosis chromosome segregation","termid":"GO:0007060"},{"relation_name":"is_a","term_name":"meiotic chromosome separation","termid":"GO:0051307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"male meiosis chromosome separation","synonyms":[{"name":"chromosome separation during male meiosis","type":"exact"},{"name":"male meiosis chromosome resolution","type":"exact"}],"termid":"GO:0051308"}


id: GO:0005682
data:
  {"annotated_genes":["SJAG_00414","SJAG_03070","SJAG_02304","SJAG_02455","SJAG_02469","SJAG_03954","SJAG_00147","SJAG_05240","SJAG_02279","SJAG_01547","SJAG_03469","SJAG_01301","SJAG_01870","SJAG_03460","SJAG_01819","SJAG_04230","SJAG_05235","SJAG_02843","SJAG_00278","SJAG_04222","SJAG_04497","SJAG_02295","SJAG_01327"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90983,91242,91666,91886,93468,94076,96690,98610,98768,101921,102390,102591,104589,106118,106687,108310,108948,110427,111002,111278,111938,112484,113902],"is_not":false,"summary":null,"term":"GO:0005682"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein complex that contains small nuclear RNA U5, a heptameric ring of Sm proteins, as well as several proteins that are unique to the U5 snRNP, most of which remain associated with the U5 snRNA both while the U5 snRNP is free or assembled into a series of spliceosomal complexes.","definition_xrefs":["GOC:krc","ISBN:0879695897","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal snRNP complex","termid":"GO:0097525"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00147":null,"SJAG_00278":null,"SJAG_00414":null,"SJAG_01301":null,"SJAG_01327":null,"SJAG_01547":null,"SJAG_01819":null,"SJAG_01870":null,"SJAG_02279":null,"SJAG_02295":null,"SJAG_02304":null,"SJAG_02455":null,"SJAG_02469":null,"SJAG_02843":null,"SJAG_03070":null,"SJAG_03460":null,"SJAG_03469":null,"SJAG_03954":null,"SJAG_04222":null,"SJAG_04230":null,"SJAG_04497":null,"SJAG_05235":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"U5 snRNP","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"snRNP U5","type":"exact"}],"termid":"GO:0005682","terms_by_termid":{"GO:0005682":null}}


id: FYPO:0000408
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115576,115577,115578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000618"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of one or more cell cycle phases is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle phase","termid":"FYPO:0002735"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of cell cycle phase","references_by_uniquename":{"PMID:23786411":null},"single_locus_annotated_genes":["SJAG_03351","SJAG_01956","SJAG_03575"],"single_locus_genotype_uniquenames":["nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"cell cycle progression: decreased rate","type":"related"},{"name":"decreased rate of cell cycle progression","type":"related"},{"name":"prolonged cell cycle phase","type":"exact"},{"name":"reduced rate of cell cycle progression","type":"related"}],"termid":"FYPO:0000408","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0000618":null}}


id: PBO:0059071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdenum cofactor synthesis 1 pseudogene 1","termid":"PBO:0059071"}


id: PBO:0036185
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_threonine_phosphorylation_during_mitosis","termid":"PBO:0036185"}


id: GO:1900627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of arugosin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of arugosin biosynthetic process","termid":"GO:1900626"},{"relation_name":"negatively_regulates","term_name":"arugosin biosynthetic process","termid":"GO:1900587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of arugosin biosynthetic process","synonyms":[{"name":"down regulation of arugosin anabolism","type":"exact"},{"name":"down regulation of arugosin biosynthesis","type":"exact"},{"name":"down regulation of arugosin biosynthetic process","type":"exact"},{"name":"down regulation of arugosin formation","type":"exact"},{"name":"down regulation of arugosin synthesis","type":"exact"},{"name":"down-regulation of arugosin anabolism","type":"exact"},{"name":"down-regulation of arugosin biosynthesis","type":"exact"},{"name":"down-regulation of arugosin biosynthetic process","type":"exact"},{"name":"down-regulation of arugosin formation","type":"exact"},{"name":"down-regulation of arugosin synthesis","type":"exact"},{"name":"downregulation of arugosin anabolism","type":"exact"},{"name":"downregulation of arugosin biosynthesis","type":"exact"},{"name":"downregulation of arugosin biosynthetic process","type":"exact"},{"name":"downregulation of arugosin formation","type":"exact"},{"name":"downregulation of arugosin synthesis","type":"exact"},{"name":"inhibition of arugosin anabolism","type":"exact"},{"name":"inhibition of arugosin biosynthesis","type":"exact"},{"name":"inhibition of arugosin biosynthetic process","type":"narrow"},{"name":"inhibition of arugosin formation","type":"exact"},{"name":"inhibition of arugosin synthesis","type":"exact"},{"name":"negative regulation of arugosin anabolism","type":"exact"},{"name":"negative regulation of arugosin biosynthesis","type":"exact"},{"name":"negative regulation of arugosin formation","type":"exact"},{"name":"negative regulation of arugosin synthesis","type":"exact"}],"termid":"GO:1900627"}


id: PBO:0049428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 5","termid":"PBO:0049428"}


id: PBO:0084900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial transporter repressible by thiamine; THI74 has a paralog, YML018C, that arose from the whole genome duplication; shows sequence homology to human gene SLC35F3, a thiamine transporter implicated in hypertension","termid":"PBO:0084900"}


id: PBO:0034392
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-proper_tributary_of","termid":"PBO:0034392"}


id: GO:1990243
data:
  {"annotated_genes":["SJAG_02311","SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88795,104017],"is_not":false,"summary":null,"term":"GO:1990243"}]},"cv_name":"cellular_component","definition":"A heterodimeric transcription factor complex composed of the bZIP proteins atf1 and pcr1. The heterodimer binds m26 sites (homologous to CRE).","definition_xrefs":["PMID:24224056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor AP-1 complex","termid":"GO:0035976"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"atf1-pcr1 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990243","terms_by_termid":{"GO:1990243":null}}


id: PBO:0091501
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative transcript, alternative initiation site","termid":"PBO:0091501"}


id: GO:0007540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which an organism senses the number of X chromosomes and autosomes in its genomic complement and responds to it.","definition_xrefs":["Wikipedia:XY_sex-determination_system","GOC:isa_complete","PMID:20622855","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"primary sex determination, soma","termid":"GO:0007539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sex determination, establishment of X:A ratio","termid":"GO:0007540"}


id: GO:0007021
data:
  {"annotated_genes":["SJAG_03463","SJAG_02672","SJAG_01526","SJAG_00505","SJAG_00983","SJAG_02270","SJAG_02040","SJAG_04074","SJAG_01545"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[84656,89312,89543,92617,92823,93571,96628,98512,102291],"is_not":false,"summary":null,"term":"GO:0007021"}]},"cv_name":"biological_process","definition":"The aggregation and bonding together of alpha- and beta-tubulin to form a tubulin heterodimer.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00505":null,"SJAG_00983":null,"SJAG_01526":null,"SJAG_01545":null,"SJAG_02040":null,"SJAG_02270":null,"SJAG_02672":null,"SJAG_03463":null,"SJAG_04074":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"tubulin complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tubulin assembly","type":"exact"},{"name":"tubulin folding","type":"related"},{"name":"tubulin-specific chaperone activity","type":"related"}],"termid":"GO:0007021","terms_by_termid":{"GO:0007021":null}}


id: PBO:0055482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2915","termid":"PBO:0055482"}


id: PBO:0031674
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_secretion","termid":"PBO:0031674"}


id: GO:1902057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (25S)-Delta(4)-dafachronate.","definition_xrefs":["GOC:TermGenie","PMID:20178781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"cellular ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"(25S)-Delta(4)-dafachronate metabolic process","synonyms":[{"name":"(25S)-Delta(4)-dafachronate metabolism","type":"exact"}],"termid":"GO:1902057"}


id: PBO:0076764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain containing 1","termid":"PBO:0076764"}


id: PBO:0077479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 200B","termid":"PBO:0077479"}


id: GO:1903243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac muscle hypertrophy in response to stress.","definition_xrefs":["GOC:TermGenie","PMID:19287093","GO_REF:0000058","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cardiac muscle hypertrophy","termid":"GO:0010614"},{"relation_name":"is_a","term_name":"negative regulation of cardiac muscle adaptation","termid":"GO:0010616"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle hypertrophy in response to stress","termid":"GO:1903242"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle hypertrophy in response to stress","termid":"GO:0014898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle hypertrophy in response to stress","synonyms":[{"name":"down regulation of cardiac muscle hypertrophy in response to stress","type":"exact"},{"name":"down-regulation of cardiac muscle hypertrophy in response to stress","type":"exact"},{"name":"downregulation of cardiac muscle hypertrophy in response to stress","type":"exact"},{"name":"inhibition of cardiac muscle hypertrophy in response to stress","type":"narrow"}],"termid":"GO:1903243"}


id: GO:1904824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an anaphase-promoting complex.","definition_xrefs":["GOC:TermGenie","PMID:16950791","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"anaphase-promoting complex assembly","synonyms":[{"name":"APC assembly","type":"broad"},{"name":"anaphase promoting complex assembly","type":"exact"},{"name":"anaphase promoting complex formation","type":"exact"},{"name":"anaphase-promoting complex formation","type":"exact"},{"name":"cyclosome assembly","type":"exact"},{"name":"cyclosome formation","type":"exact"}],"termid":"GO:1904824"}


id: MOD:01219
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:286#D","PubMed:9750125","PubMed:9254591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sulfanilic Acid (SA), heavy C13","termid":"MOD:00606"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfanilic Acid (SA), heavy C13 - site D","synonyms":[{"name":"Heavy Sulfanilic Acid (SA) C13","type":"related"},{"name":"SulfanilicAcid:13C(6)","type":"related"}],"termid":"MOD:01219"}


id: PBO:0079623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 M pseudogene 1","termid":"PBO:0079623"}


id: FYPO:0006532
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the centromere of a chromosome is normal (i.e. indistinguishable from wild type) during prophase of the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during meiotic cell cycle","termid":"FYPO:0006529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000257","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"normal protein localization to centromere during meiotic prophase II","synonyms":[{"name":"normal protein localisation to centromere during meiotic prophase II","type":"exact"},{"name":"normal protein localisation to centromere during prophase II","type":"exact"},{"name":"normal protein localization to chromosome, centric region during meiotic prophase II","type":"exact"},{"name":"normal protein localization to chromosome, centromeric region during prophase II","type":"exact"}],"termid":"FYPO:0006532"}


id: GO:0106020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vesicle docking.","definition_xrefs":["PMID:22810233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"vesicle docking","termid":"GO:0048278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140056","GO:0008150"],"is_obsolete":false,"name":"regulation of vesicle docking","synonyms":[{"name":"regulation of vesicle to membrane docking","type":"exact"}],"termid":"GO:0106020"}


id: PBO:0041653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit beta 3","termid":"PBO:0041653"}


id: PR:Q9P7Y9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sin1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7Y9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress-activated map kinase-interacting protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPYUG7.02c","synonyms":[{"name":"SAPK-interacting protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sin1","type":"exact"}],"termid":"PR:Q9P7Y9"}


id: PBO:0081244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 14","termid":"PBO:0081244"}


id: PBO:0108578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome large subunit export factor","termid":"PBO:0108578"}


id: PBO:0076501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 1","termid":"PBO:0076501"}


id: PBO:0035978
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_trimethylation_during_vegetative_growth","termid":"PBO:0035978"}


id: GO:0033412
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UAG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"UAG codon-amino acid adaptor activity","synonyms":[{"name":"TAG codon-amino acid adaptor activity","type":"exact"}],"termid":"GO:0033412"}


id: PBO:0110073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 involved in rescue of stalled ribosomes Hel2","termid":"PBO:0110073"}


id: GO:1900429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of filamentous growth of a population of unicellular organisms.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of filamentous growth","termid":"GO:0060258"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900428"},{"relation_name":"negatively_regulates","term_name":"filamentous growth of a population of unicellular organisms","termid":"GO:0044182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of filamentous growth of a population of unicellular organisms","synonyms":[{"name":"down regulation of filamentous growth of a population of unicellular organisms","type":"exact"},{"name":"down-regulation of filamentous growth of a population of unicellular organisms","type":"exact"},{"name":"downregulation of filamentous growth of a population of unicellular organisms","type":"exact"},{"name":"inhibition of filamentous growth of a population of unicellular organisms","type":"narrow"}],"termid":"GO:1900429"}


id: PBO:0080441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VRK serine/threonine kinase 2","termid":"PBO:0080441"}


id: PBO:0046282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMAP like 1","termid":"PBO:0046282"}


id: PBO:0048817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma 5B","termid":"PBO:0048817"}


id: GO:0060088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells.","definition_xrefs":["PMID:10978835","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear receptor cell stereocilium organization","termid":"GO:0060122"},{"relation_name":"part_of","term_name":"auditory receptor cell morphogenesis","termid":"GO:0002093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auditory receptor cell stereocilium organization","synonyms":[{"name":"auditory receptor cell stereocilium organisation","type":"exact"},{"name":"auditory receptor cell stereocilium organization and biogenesis","type":"related"}],"termid":"GO:0060088"}


id: PBO:0053429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 374","termid":"PBO:0053429"}


id: GO:1902437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of male mating behavior.","definition_xrefs":["PMID:24089208","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"is_a","term_name":"regulation of male mating behavior","termid":"GO:1902435"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"male mating behavior","termid":"GO:0060179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of male mating behavior","synonyms":[{"name":"activation of male mating behavior","type":"narrow"},{"name":"up regulation of male mating behavior","type":"exact"},{"name":"up-regulation of male mating behavior","type":"exact"},{"name":"upregulation of male mating behavior","type":"exact"}],"termid":"GO:1902437"}


id: PBO:0005185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger splicing factor Bpb1","termid":"PBO:0005185"}


id: PBO:0051348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-36 (pseudogene)","termid":"PBO:0051348"}


id: PBO:0003107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Glutamine","termid":"PBO:0003107"}


id: PBO:0072421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 26","termid":"PBO:0072421"}


id: GO:1904865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of beta-catenin-TCF complex assembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of beta-catenin-TCF complex assembly","termid":"GO:1904863"},{"relation_name":"positively_regulates","term_name":"beta-catenin-TCF complex assembly","termid":"GO:1904837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"positive regulation of beta-catenin-TCF complex assembly","synonyms":[{"name":"activation of beta-catenin-TCF complex assembly","type":"narrow"},{"name":"activation of beta-catenin-TCF complex formation","type":"narrow"},{"name":"activation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"activation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"activation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"activation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"activation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"activation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"},{"name":"positive regulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"positive regulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"positive regulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"positive regulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"positive regulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"positive regulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"positive regulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"},{"name":"up regulation of beta-catenin-TCF complex assembly","type":"exact"},{"name":"up regulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"up regulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"up regulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"up regulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"up regulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"up regulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"up regulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"},{"name":"up-regulation of beta-catenin-TCF complex assembly","type":"exact"},{"name":"up-regulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"up-regulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"up-regulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"up-regulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"up-regulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"up-regulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"up-regulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"},{"name":"upregulation of beta-catenin-TCF complex assembly","type":"exact"},{"name":"upregulation of beta-catenin-TCF complex formation","type":"exact"},{"name":"upregulation of beta-catenin/LEF complex assembly","type":"narrow"},{"name":"upregulation of beta-catenin/LEF complex formation","type":"narrow"},{"name":"upregulation of beta-catenin/T-cell factor complex assembly","type":"related"},{"name":"upregulation of beta-catenin/T-cell factor complex formation","type":"related"},{"name":"upregulation of beta-catenin/lymphoid enhancer binding factor complex assembly","type":"related"},{"name":"upregulation of beta-catenin/lymphoid enhancer binding factor complex formation","type":"related"}],"termid":"GO:1904865"}


id: GO:0046542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of alpha-factor, one of the two yeast mating factors, out of a cell.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-factor export (obsolete GO:0046542)","synonyms":[{"name":"alpha-factor export","type":"exact"}],"termid":"GO:0046542"}


id: PBO:0026991
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_galactose:mannose_ratio_in_glycoprotein_glycan","termid":"PBO:0026991"}


id: PBO:0017664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug114","termid":"PBO:0017664"}


id: PR:000027619
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor zip1 phosphorylated form in Schizosaccharomyces pombe. Example: UniProtKB:Q10424-1, MOD:00696.","definition_xrefs":["PMID:15660136","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor zip1","termid":"PR:000027614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zip1/PhosRes+","pombase_gene_id":"SPAC25G10.03","synonyms":[{"name":"PomBase_original_PRO_term_name: transcription factor zip1 phosphorylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-zip1/PhosRes+","type":"exact"},{"name":"zip1/PhosRes+","type":"exact"}],"termid":"PR:000027619"}


id: GO:0042117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a monocyte resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["ISBN:0781735149","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte activation","termid":"GO:0002274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monocyte activation","termid":"GO:0042117"}


id: GO:0071261
data:
  {"annotated_genes":["SJAG_00959"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94112],"is_not":false,"summary":null,"term":"GO:0071261"}]},"cv_name":"cellular_component","definition":"A translocon complex that contains a core heterotrimer of alpha, beta and gamma subunits, and may contain additional proteins (translocon-associated proteins or TRAPs); in budding yeast the core proteins are Ssh1p, Sbh2p, and Sss1p. The Ssh1 translocon complex is involved in the cotranslational pathway of protein transport across the ER membrane, and recognizes proteins bearing strongly hydrophobic signal sequences.","definition_xrefs":["GOC:mah","PMID:8612571","PMID:12134063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translocon complex","termid":"GO:0071256"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00959":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0005789","GO:0032991","GO:0005783","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"Ssh1 translocon complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Ssh1p-Sss1p-Sbh2p complex","type":"narrow"}],"termid":"GO:0071261","terms_by_termid":{"GO:0071261":null}}


id: PR:Q9USW8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mni1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USW8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19C7.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C7.01","synonyms":[{"name":"Spom972h-mni1","type":"exact"}],"termid":"PR:Q9USW8"}


id: PBO:0058756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6880","termid":"PBO:0058756"}


id: GO:0030378
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the synthesis of free D-serine from L-serine.","definition_xrefs":["GOC:kd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid racemase activity","termid":"GO:0047661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"serine racemase activity","secondary_identifiers":["Reactome:R-HSA-9014766","MetaCyc:5.1.1.18-RXN","RHEA:10980","EC:5.1.1.18"],"termid":"GO:0030378"}


id: PBO:0061910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily AB member 1 pseudogene","termid":"PBO:0061910"}


id: PBO:0042658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 7","termid":"PBO:0042658"}


id: SO:1000008
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A single nucleotide change which has occurred at the same position of a corresponding nucleotide in a reference sequence.","definition_xrefs":["SO:immuno_workshop"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNV","termid":"SO:0001483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"point_mutation","secondary_identifiers":["http://en.wikipedia.org/wiki/Point_mutation"],"synonyms":[{"name":"point mutation","type":"exact"}],"termid":"SO:1000008"}


id: PBO:0068068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 373","termid":"PBO:0068068"}


id: GO:0016115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of terpenoids, any member of a class of compounds characterized by an isoprenoid chemical structure.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"},{"relation_name":"is_a","term_name":"isoprenoid catabolic process","termid":"GO:0008300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044248","GO:0006629"],"is_obsolete":false,"name":"terpenoid catabolic process","synonyms":[{"name":"terpenoid breakdown","type":"exact"},{"name":"terpenoid catabolism","type":"exact"},{"name":"terpenoid degradation","type":"exact"}],"termid":"GO:0016115"}


id: PBO:0072199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 16","termid":"PBO:0072199"}


id: PBO:0064412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNMA family member 6E","termid":"PBO:0064412"}


id: PR:Q9Y813
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpr2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P protein subunit rpr2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.16c","synonyms":[{"name":"RNA-processing protein rpr2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpr2","type":"exact"}],"termid":"PR:Q9Y813"}


id: PBO:0017956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRG1 family protein, involved in mRNA splicing (predicted)","termid":"PBO:0017956"}


id: FYECO:0000342
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ICRF-193 was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ICRF-193","termid":"FYECO:0000342"}


id: PBO:0068804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 41, pseudogene","termid":"PBO:0068804"}


id: PBO:0031343
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_hydrogen_peroxide","termid":"PBO:0031343"}


id: PBO:0071530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 33","termid":"PBO:0071530"}


id: PBO:0077651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 8 like 3","termid":"PBO:0077651"}


id: PBO:0059363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S18A","termid":"PBO:0059363"}


id: PR:O74508
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"set1 complex component spp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC594.05c","synonyms":[{"name":"COMPASS component spp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Set1C component spp1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-spf1","type":"exact"},{"name":"complex proteins associated with set1 protein spp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74508"}


id: PBO:0081031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 11C","termid":"PBO:0081031"}


id: PBO:0090082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP-independent ER targeting protein Snd2","termid":"PBO:0090082"}


id: GO:0035211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a spermathecum, a sperm storage organ, are generated and organized. Paired spermathecae lie at the anterior end of the insect uterus on the dorsal side. Each spermatheca consists of an oval shaped capsule, connected to the uterus by a spermathecal stalk.","definition_xrefs":["PMID:12679097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermathecum morphogenesis","termid":"GO:0035211"}


id: PBO:0086503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative precursor of the subtilisin-like protease III; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; YSP3 has a paralog, PRB1, that arose from the whole genome duplication","termid":"PBO:0086503"}


id: GO:1902080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of calcium ion import into sarcoplasmic reticulum.","definition_xrefs":["GOC:rl","GOC:TermGenie","GOC:BHF","PMID:8349590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of calcium ion transport","termid":"GO:0051924"},{"relation_name":"regulates","term_name":"calcium ion import into sarcoplasmic reticulum","termid":"GO:1990036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of calcium ion import into sarcoplasmic reticulum","termid":"GO:1902080"}


id: PBO:0053724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 938","termid":"PBO:0053724"}


id: GO:0021640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the trochlear nerve to attain its fully functional state. The trochlear nerve is a motor nerve and is the only cranial nerve to exit the brain dorsally. The trochlear nerve innervates the superior oblique muscle.","definition_xrefs":["GOC:jid","GOC:cls","GOC:dph","ISBN:0838580343","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"trochlear nerve development","termid":"GO:0021558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trochlear nerve maturation","synonyms":[{"name":"CN IV maturation","type":"related"}],"termid":"GO:0021640"}


id: GO:0033711
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-phospho-D-erythronate + NAD+ = (R)-3-hydroxy-2-oxo-4-phosphonooxybutanoate + H+ + NADH.","definition_xrefs":["RHEA:18829","EC:1.1.1.290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4-phosphoerythronate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R04210","MetaCyc:ERYTHRON4PDEHYDROG-RXN"],"synonyms":[{"name":"4-O-phosphoerythronate dehydrogenase activity","type":"related"},{"name":"4-phospho-D-erythronate:NAD+ 2-oxidoreductase activity","type":"related"},{"name":"4PE dehydrogenase activity","type":"related"},{"name":"PdxB","type":"related"},{"name":"PdxB 4PE dehydrogenase activity","type":"related"},{"name":"erythronate-4-phosphate dehydrogenase activity","type":"related"}],"termid":"GO:0033711"}


id: PBO:0061383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 43","termid":"PBO:0061383"}


id: GO:0071975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell motility that results in the smooth movement of a cell through a liquid medium.","definition_xrefs":["PMID:18461074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell swimming","synonyms":[{"name":"cell swimming motility","type":"exact"}],"termid":"GO:0071975"}


id: PBO:0040869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMF antisense RNA 1","termid":"PBO:0040869"}


id: GO:0009322
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the reduction of trimethylamine N-oxide to trimethylamine.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"trimethylamine-N-oxide reductase complex","termid":"GO:0009322"}


id: PBO:0073835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 7 member 11","termid":"PBO:0073835"}


id: PR:Q9UR21
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24B11.14 gene.","definition_xrefs":["UniProtKB:Q9UR21","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B11.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24B11.14","synonyms":[{"name":"Spom972h-SPAC24B11.14","type":"exact"}],"termid":"PR:Q9UR21"}


id: GO:0072528
data:
  {"annotated_genes":["SJAG_00533","SJAG_02406","SJAG_00827","SJAG_03164","SJAG_00197","SJAG_05029","SJAG_03708","SJAG_04627","SJAG_00885","SJAG_00694","SJAG_02874","SJAG_00444","SJAG_02421","SJAG_00957","SJAG_00381","SJAG_04713","SJAG_04282","SJAG_04712","SJAG_00392","SJAG_00964","SJAG_02420","SJAG_04067","SJAG_05024","SJAG_00779","SJAG_03771","SJAG_04665","SJAG_03362","SJAG_01970","SJAG_04264","SJAG_04487","SJAG_04354","SJAG_03538","SJAG_04866","SJAG_04709","SJAG_02887","SJAG_04657"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[112799,94559,89468,83857,111646,107134,107975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006207"},{"annotations":[107976,85516,89469,112800,94560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[111647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[67065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[96132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[89017,110980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[88484,91549,103314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006240"},{"annotations":[114090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006233"},{"annotations":[85442,104431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"},{"annotations":[88485,114091,85443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006235"},{"annotations":[114092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006227"},{"annotations":[95047,104432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006226"},{"annotations":[84523],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903931"},{"annotations":[85100,109748],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090180"},{"annotations":[85517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019856"},{"annotations":[109884,93799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043097"},{"annotations":[107977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046132"},{"annotations":[84518,86712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008655"},{"annotations":[110077,95581,90350,109661,112091,109655,103431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009228"},{"annotations":[109662,109656,110078,112092,95582,90351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009229"},{"annotations":[106504,95584,106503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036172"},{"annotations":[111648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[84519,88016,83538,110982,89018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[88017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006223"},{"annotations":[96134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a pyrimidine-containing compound, i.e. any compound that contains pyrimidine or a formal derivative thereof.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"pyrimidine-containing compound metabolic 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process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"pyrimidine and derivative biosynthetic process","type":"exact"},{"name":"pyrimidine-containing compound anabolism","type":"exact"},{"name":"pyrimidine-containing compound biosynthesis","type":"exact"},{"name":"pyrimidine-containing compound formation","type":"exact"},{"name":"pyrimidine-containing compound synthesis","type":"exact"}],"termid":"GO:0072528","terms_by_termid":{"GO:0006207":null,"GO:0006223":null,"GO:0006225":null,"GO:0006226":null,"GO:0006227":null,"GO:0006228":null,"GO:0006231":null,"GO:0006233":null,"GO:0006235":null,"GO:0006240":null,"GO:0006241":null,"GO:0008655":null,"GO:0009224":null,"GO:0009228":null,"GO:0009229":null,"GO:0019856":null,"GO:0036172":null,"GO:0043097":null,"GO:0044205":null,"GO:0044206":null,"GO:0044210":null,"GO:0044211":null,"GO:0046132":null,"GO:0046705":null,"GO:0090180":null,"GO:1903931":null}}


id: PBO:0076563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3D","termid":"PBO:0076563"}


id: PBO:0039901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 4","termid":"PBO:0039901"}


id: GO:2001042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the process of physically separating the septal cell wall material by enzymatic digestion, that occurs after daughter cells are separated by cytokinesis.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of septum digestion after cytokinesis","termid":"GO:0010590"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"septum digestion after cytokinesis","termid":"GO:0000920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of septum digestion after cytokinesis","synonyms":[{"name":"negative regulation of cytokinetic cell separation","type":"exact"}],"termid":"GO:2001042"}


id: PR:Q9USP0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC11E10.07c gene.","definition_xrefs":["UniProtKB:Q9USP0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF-2B subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.07c","synonyms":[{"name":"Spom972h-SPCC11E10.07c","type":"exact"},{"name":"eIF-2B GDP-GTP exchange factor subunit alpha (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USP0"}


id: PBO:0036549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS/CORVET complex subunit, ubiquitin-protein ligase E3 Pep3/Vps18 (predicted)","termid":"PBO:0036549"}


id: GO:0140105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-10 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:11244051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-10-mediated signaling pathway","synonyms":[{"name":"IL-10-mediated signaling pathway","type":"exact"},{"name":"interleukin-10-mediated signalling pathway","type":"exact"}],"termid":"GO:0140105"}


id: PR:O13983
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hrq1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent helicase hrq1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23A1.19c","synonyms":[{"name":"Spom972h-hrq1","type":"exact"},{"name":"homologous to recQ protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13983"}


id: GO:1901416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to ethanol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to alcohol","termid":"GO:1901419"},{"relation_name":"regulates","term_name":"response to ethanol","termid":"GO:0045471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to ethanol","termid":"GO:1901416"}


id: GO:0034214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of a protein hexamer, a macromolecular structure consisting of six noncovalently associated identical or nonidentical subunits.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein complex oligomerization","termid":"GO:0051259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"protein hexamerization","synonyms":[{"name":"protein hexamer assembly","type":"exact"},{"name":"protein hexamer biosynthesis","type":"exact"},{"name":"protein hexamer biosynthetic process","type":"exact"},{"name":"protein hexamer formation","type":"exact"}],"termid":"GO:0034214"}


id: PBO:0046702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS variant transcription factor 2","termid":"PBO:0046702"}


id: PBO:0066021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN binding protein 2","termid":"PBO:0066021"}


id: PBO:0089532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Pcr1","termid":"PBO:0089532"}


id: PR:Q92371
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- btf3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92371"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nascent polypeptide-associated complex subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.14c","synonyms":[{"name":"NAC-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-btf3","type":"exact"},{"name":"beta-NAC (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q92371"}


id: PBO:0076351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 15B","termid":"PBO:0076351"}


id: FYPO:0006624
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3,4,5-trisphosphate measured in the plasma membrane is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal plasma membrane during vegetative growth","termid":"FYPO:0003278"},{"relation_name":"is_a","term_name":"increased cellular phosphatidylinositol-3,4,5-trisphosphate level","termid":"FYPO:0006488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased phosphatidylinositol-3,4,5-trisphosphate level in plasma membrane","synonyms":[{"name":"increased 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate level in plasma membrane","type":"exact"},{"name":"increased phosphatidylinositol-3,4,5-trisphosphate level in cell membrane","type":"exact"},{"name":"increased phosphatidylinositol-3,4,5-trisphosphate level in plasma membrane during mitotic cell cycle","type":"related"},{"name":"increased phosphatidylinositol-3,4,5-trisphosphate level in plasma membrane during vegetative growth","type":"exact"},{"name":"increased plasma membrane PI(3,4,5)P3 level","type":"exact"},{"name":"increased plasma membrane phosphatidylinositol-3,4,5-trisphosphate level","type":"exact"}],"termid":"FYPO:0006624"}


id: GO:0030367
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-17 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-17 receptor binding","synonyms":[{"name":"IL-17","type":"narrow"},{"name":"interleukin-17 receptor ligand","type":"narrow"}],"termid":"GO:0030367"}


id: PBO:0083890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of the nuclear pore complex; also part of the nuclear pore complex (NPC) cytoplasmic filaments; contributes directly to nucleocytoplasmic transport and maintenance of the NPC permeability barrier and is involved in gene tethering at the nuclear periphery; interacts with Gle1p; human homolog NUP42 can complement yeast mutant","termid":"PBO:0083890"}


id: FYPO:0000695
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-1,N6-ethenoadenine N-glycosylase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA-1,N6-ethenoadenine N-glycosylase activity","termid":"FYPO:0000692"},{"relation_name":"is_a","term_name":"increased DNA N-glycosylase activity","termid":"FYPO:0008217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"increased DNA-1,N6-ethenoadenine N-glycosylase activity","termid":"FYPO:0000695"}


id: PBO:0055132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2551","termid":"PBO:0055132"}


id: GO:0070715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, sodium-dependent, movement of organic cations into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"sodium-dependent organic cation transport","termid":"GO:0070715"}


id: PBO:0056885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial contact site and cristae organizing system subunit 13","termid":"PBO:0056885"}


id: PBO:0063211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(rC) binding protein 4","termid":"PBO:0063211"}


id: PATO:0001474
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An oriented quality inhering in a bearer by virtue of the bearer's axis being positioned forward.","definition_xrefs":["bdid:bdid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oriented","termid":"PATO:0000614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anteverted","termid":"PATO:0001474"}


id: PBO:0030004
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sporulation_resulting_in_formation_of_ascus_with_more_or_fewer_than_four_spores","termid":"PBO:0030004"}


id: GO:0015442
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O + (Na+ or H+)(in) = ADP + phosphate + (Na+ or H+)(out).","definition_xrefs":["TC:3.A.2.-.-"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrogen-/sodium-translocating ATPase activity (obsolete GO:0015442)","synonyms":[{"name":"hydrogen-/sodium-translocating ATPase activity","type":"exact"},{"name":"proton-/sodium-translocating ATPase activity","type":"exact"}],"termid":"GO:0015442"}


id: SO:0000340
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a nucleic acid molecule which controls its own replication through the interaction of specific proteins at one or more origins of replication.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replicon","termid":"SO:0001235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome","secondary_identifiers":["http://en.wikipedia.org/wiki/Chromosome"],"termid":"SO:0000340"}


id: GO:0098880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which maintains the organization and the arrangement of proteins in the presynaptic specialization.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic density organization","termid":"GO:0097106"},{"relation_name":"is_a","term_name":"maintenance of synapse structure","termid":"GO:0099558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of postsynaptic specialization structure","termid":"GO:0098880"}


id: GO:0003818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the inactivation of complement subcomponents C3b, iC3b and C4b by proteolytic cleavage.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete complement factor I activity (obsolete GO:0003818)","synonyms":[{"name":"C3b inactivator activity","type":"narrow"},{"name":"C3b/C4b inactivator activity","type":"related"},{"name":"C3bINA","type":"related"},{"name":"complement C3b inactivator","type":"related"},{"name":"complement C3b/C4b inactivator","type":"related"},{"name":"complement C4b inactivator","type":"related"},{"name":"complement C4bi","type":"related"},{"name":"complement component C3b inactivator activity","type":"related"},{"name":"complement factor I activity","type":"exact"},{"name":"conglutinogen-activating factor C","type":"related"},{"name":"factor I","type":"related"}],"termid":"GO:0003818"}


id: GO:0042929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of a ferrichrome from one side of a membrane to the other. Ferrichromes are any of a group of growth-promoting Fe(III) chelates formed by various genera of microfungi. They are homodetic cyclic hexapeptides made up of a tripeptide of glycine (or other small neutral amino acids) and a tripeptide of an N'acyl-N4-hydroxy-L-ornithine.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore-iron transmembrane transporter activity","termid":"GO:0015343"},{"relation_name":"is_a","term_name":"iron chelate transmembrane transporter activity","termid":"GO:0015603"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ferrichrome transmembrane transporter activity","synonyms":[{"name":"ferrichrome transporter activity","type":"related"}],"termid":"GO:0042929"}


id: PBO:0054965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2379","termid":"PBO:0054965"}


id: GO:0021579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the medulla oblongata is generated and organized. The medulla oblongata lies directly above the spinal cord and controls vital autonomic functions such as digestion, breathing and the control of heart rate.","definition_xrefs":["GOC:jid","GOC:dph","ISBN:0838580343","GO_REF:0000021","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"medulla oblongata development","termid":"GO:0021550"},{"relation_name":"part_of","term_name":"hindbrain morphogenesis","termid":"GO:0021575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"medulla oblongata morphogenesis","synonyms":[{"name":"medulla morphogenesis","type":"related"},{"name":"myelencephalon morphogenesis","type":"related"}],"termid":"GO:0021579"}


id: MOD:00974
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-chloro-L-tyrosine","termid":"MOD:01046"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(35)Cl labeled 3'-chlorotyrosine","termid":"MOD:00974"}


id: PBO:0017794
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human CDC14A","termid":"PBO:0017794"}


id: PBO:0043969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin zeta like 2, pseudogene","termid":"PBO:0043969"}


id: GO:0001994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in a decrease in the diameter of an artery during the norepinephrine-epinephrine response to decreased blood pressure.","definition_xrefs":["ISBN:0721643949","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasoconstriction","termid":"GO:0042310"},{"relation_name":"part_of","term_name":"positive regulation of blood pressure by epinephrine-norepinephrine","termid":"GO:0003321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"norepinephrine-epinephrine vasoconstriction involved in regulation of systemic arterial blood pressure","synonyms":[{"name":"noradrenaline-adrenaline vasoconstriction involved in regulation of blood pressure","type":"exact"},{"name":"norepinephrine-epinephrine vasoconstriction during blood pressure control","type":"related"},{"name":"norepinephrine-epinephrine vasoconstriction during blood pressure regulation","type":"exact"},{"name":"norepinephrine-epinephrine vasoconstriction during control of blood pressure","type":"related"}],"termid":"GO:0001994"}


id: PBO:0055063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2479","termid":"PBO:0055063"}


id: GO:0043025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell body","termid":"GO:0044297"},{"relation_name":"part_of","term_name":"somatodendritic compartment","termid":"GO:0036477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"neuronal cell body","secondary_identifiers":["NIF_Subcellular:sao1044911821","Wikipedia:Soma_(biology)"],"synonyms":[{"name":"neuron cell body","type":"exact"},{"name":"neuronal cell soma","type":"exact"}],"termid":"GO:0043025"}


id: PBO:0077279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 18","termid":"PBO:0077279"}


id: GO:0000217
data:
  {"annotated_genes":["SJAG_02708","SJAG_02724","SJAG_02690","SJAG_04752","SJAG_03097","SJAG_01076","SJAG_04671","SJAG_02294","SJAG_01419","SJAG_02262","SJAG_04064","SJAG_02200","SJAG_01262","SJAG_05373","SJAG_04933","SJAG_02226"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107542,112888,95425,89719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000405"},{"annotations":[90791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000402"},{"annotations":[95426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062037"},{"annotations":[112891,96646,102118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000406"},{"annotations":[88700,92991,90794,96713,102119,90932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000400"},{"annotations":[96647,101989,102121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000404"},{"annotations":[96648,102684,84623,95429,102123,90795,112896,104574,77677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000403"}]},"cv_name":"molecular_function","definition":"Binding to a DNA secondary structure element such as a four-way junction, a bubble, a loop, Y-form DNA, or a double-strand/single-strand junction.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":16,"genes_by_uniquename":{"SJAG_01076":null,"SJAG_01262":null,"SJAG_01419":null,"SJAG_02200":null,"SJAG_02226":null,"SJAG_02262":null,"SJAG_02294":null,"SJAG_02690":null,"SJAG_02708":null,"SJAG_02724":null,"SJAG_03097":null,"SJAG_04064":null,"SJAG_04671":null,"SJAG_04752":null,"SJAG_04933":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"DNA secondary structure binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000217","terms_by_termid":{"GO:0000400":null,"GO:0000402":null,"GO:0000403":null,"GO:0000404":null,"GO:0000405":null,"GO:0000406":null,"GO:0062037":null}}


id: SO:0001780
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant found within only speficic populations.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_origin","termid":"SO:0001762"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"population_specific_variant","synonyms":[{"name":"population specific variant","type":"exact"}],"termid":"SO:0001780"}


id: PBO:0027966
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_dimethylation_at_subtelomeric_heterochromatin","termid":"PBO:0027966"}


id: PBO:0058966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"makorin ring finger protein 9, pseudogene","termid":"PBO:0058966"}


id: GO:0030297
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of a transmembrane receptor protein tyrosine kinase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein tyrosine kinase activator activity","termid":"GO:0030296"},{"relation_name":"is_a","term_name":"signaling receptor activator activity","termid":"GO:0030546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0030234","GO:0140677"],"is_obsolete":false,"name":"transmembrane receptor protein tyrosine kinase activator activity","termid":"GO:0030297"}


id: FYPO:0001221
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the ratio of the nuclear volume to the total cell volume is in the same range as wild type (approximately 0.076-0.089).","definition_xrefs":["PMID:17998401","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative phenotype","termid":"FYPO:0001312"},{"relation_name":"is_a","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal nucleus:cytoplasm ratio","synonyms":[{"name":"normal nuclear:cytoplasmic ratio","type":"exact"},{"name":"normal nuclear:cytoplasmic volume ratio","type":"exact"},{"name":"normal nucleus:cell volume ratio","type":"exact"},{"name":"normal nucleus:cytoplasm ratio during mitotic cell cycle","type":"related"},{"name":"normal nucleus:cytoplasm ratio during vegetative growth","type":"exact"},{"name":"normal nucleus:cytoplasm volume ratio","type":"exact"}],"termid":"FYPO:0001221"}


id: PBO:0042710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CELSR1 pseudogene 1","termid":"PBO:0042710"}


id: GO:0031277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the assembly of pseudopodia from the lateral side of the cell.","definition_xrefs":["GOC:pg","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of lateral pseudopodium assembly (obsolete GO:0031277)","synonyms":[{"name":"activation of lateral pseudopodium formation","type":"narrow"},{"name":"positive regulation of lateral pseudopodium formation","type":"related"},{"name":"stimulation of lateral pseudopodium formation","type":"narrow"},{"name":"up regulation of lateral pseudopodium formation","type":"related"},{"name":"up-regulation of lateral pseudopodium formation","type":"related"},{"name":"upregulation of lateral pseudopodium formation","type":"related"}],"termid":"GO:0031277"}


id: PBO:0046167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E74 like ETS transcription factor 4","termid":"PBO:0046167"}


id: GO:0045353
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Blocks the binding of interleukin-1 to interleukin-1 type II receptors.","definition_xrefs":["GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-1 receptor antagonist activity","termid":"GO:0005152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0140678","GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-1 type II receptor antagonist activity","synonyms":[{"name":"IL-1ra type II","type":"exact"}],"termid":"GO:0045353"}


id: PBO:0001556
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe HomeoboX","termid":"PBO:0001556"}


id: PBO:0029617
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_mononucleate_monoseptate_vegetative_cell","termid":"PBO:0029617"}


id: PBO:0041284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 9","termid":"PBO:0041284"}


id: PBO:0047070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 131 member C","termid":"PBO:0047070"}


id: FYPO:0006761
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a greater extent than normal during a cellular response to hydroxyurea. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during vegetative growth","termid":"FYPO:0000780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000294"],"is_obsolete":false,"name":"increased transcription during cellular response to hydroxyurea","synonyms":[{"name":"increased transcription during cellular response to HU","type":"exact"},{"name":"increased transcription during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased transcription during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"increased transcription in response to HU","type":"exact"},{"name":"increased transcription in response to hydroxyurea","type":"exact"}],"termid":"FYPO:0006761"}


id: PBO:0017604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex ubiquitin -protein ligase E3 subunit Apc11","termid":"PBO:0017604"}


id: GO:0035224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the anterior/posterior axis of the genital disc. An anterior and posterior compartment form in each of the three genital disc primoridia (the female genital disc primordium, the male genital disc primordium and the anal primordium).","definition_xrefs":["PMID:11494318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification, imaginal disc","termid":"GO:0007448"},{"relation_name":"is_a","term_name":"genital disc pattern formation","termid":"GO:0035221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"genital disc anterior/posterior pattern formation","termid":"GO:0035224"}


id: PBO:0079274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 41, pseudogene","termid":"PBO:0079274"}


id: PBO:0001780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide N-methyltransferase Nnt1 (predicted)","termid":"PBO:0001780"}


id: PBO:0062017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily L member 8","termid":"PBO:0062017"}


id: PR:000050494
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe) that has been phosphorylated at either position 2, 5, or 7 of one or more C-terminal heptad repeats (YSPTSPS).","definition_xrefs":["PomBase:VW","PMID:28367989","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe)","termid":"PR:000044736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rpb1/Phos(CTD-S2,S5,S7)","pombase_gene_id":"SPBC28F2.12","synonyms":[{"name":"PomBase_original_PRO_term_name: DNA-directed RNA polymerase II subunit rpb1 CTD-phosphorylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rpb1/Phos:CTD","type":"exact"},{"name":"rpb1/Phos(CTD-S2,S5,S7)","type":"exact"}],"termid":"PR:000050494"}


id: GO:0032073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of a restriction endodeoxyribonuclease activity, the catalysis of endonucleolytic cleavage of DNA in a site-specific manner, resulting in double-strand breaks.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of restriction endodeoxyribonuclease activity","termid":"GO:0032072"},{"relation_name":"is_a","term_name":"negative regulation of endodeoxyribonuclease activity","termid":"GO:0032078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of restriction endodeoxyribonuclease activity","synonyms":[{"name":"down regulation of restriction endodeoxyribonuclease activity","type":"exact"},{"name":"down-regulation of restriction endodeoxyribonuclease activity","type":"exact"},{"name":"downregulation of restriction endodeoxyribonuclease activity","type":"exact"},{"name":"inhibition of restriction endodeoxyribonuclease activity","type":"narrow"},{"name":"restriction alleviation","type":"narrow"},{"name":"restriction endodeoxyribonuclease inhibitor","type":"related"},{"name":"restriction enzyme inhibitor","type":"related"}],"termid":"GO:0032073"}


id: PBO:0053994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1315","termid":"PBO:0053994"}


id: PBO:0005203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane insertion protein Get4 (predicted)","termid":"PBO:0005203"}


id: PBO:0083934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G1 cyclin involved in regulation of the cell cycle; activates Cdc28p kinase to promote the G1 to S phase transition; late G1 specific expression depends on transcription factor complexes, MBF (Swi6p-Mbp1p) and SBF (Swi6p-Swi4p); CLN2 has a paralog, CLN1, that arose from the whole genome duplication; cell cycle arrest phenotype of the cln1 cln2 cln3 triple null mutant is complemented by any of human cyclins CCNA2, CCNB1, CCNC, CCND1, or CCNE1","termid":"PBO:0083934"}


id: PBO:0053944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1247","termid":"PBO:0053944"}


id: PATO:0001174
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001174 urine composition (obsolete PATO:0001174)","termid":"PATO:0001174"}


id: PBO:0029733
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_papulacandin_D","termid":"PBO:0029733"}


id: SO:0001512
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A quality of a chromosomal insertion,.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alteration_attribute","termid":"SO:0001508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insertion_attribute","synonyms":[{"name":"insertion attribute","type":"exact"}],"termid":"SO:0001512"}


id: PBO:0086737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; overexpression causes a cell cycle delay or arrest","termid":"PBO:0086737"}


id: PBO:0088015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type I membrane protein involved in autophagy and the Cvt pathway; may be involved in membrane delivery to the phagophore assembly site","termid":"PBO:0088015"}


id: PBO:0053819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1080","termid":"PBO:0053819"}


id: GO:0044147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the progression of an organism from an initial condition to a later condition, occurring in, on or near the exterior of its host organism.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of formation of structure involved in a symbiotic process","termid":"GO:0044145"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"negatively_regulates","term_name":"formation of structure involved in a symbiotic process","termid":"GO:0044111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of formation of structure involved in a symbiotic process","synonyms":[{"name":"negative regulation of development of symbiont during interaction with host","type":"related"},{"name":"negative regulation of development of symbiont involved in interaction with host","type":"related"}],"termid":"GO:0044147"}


id: GO:0070368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of hepatocyte differentiation.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of hepatocyte differentiation","termid":"GO:0070366"},{"relation_name":"positively_regulates","term_name":"hepatocyte differentiation","termid":"GO:0070365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hepatocyte differentiation","synonyms":[{"name":"activation of hepatocyte differentiation","type":"narrow"},{"name":"positive regulation of liver cell differentiation","type":"exact"},{"name":"stimulation of hepatocyte differentiation","type":"narrow"},{"name":"up regulation of hepatocyte differentiation","type":"exact"},{"name":"up-regulation of hepatocyte differentiation","type":"exact"},{"name":"upregulation of hepatocyte differentiation","type":"exact"}],"termid":"GO:0070368"}


id: PBO:0061369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 29","termid":"PBO:0061369"}


id: PBO:0029427
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_palmitoylation_during_vegetative_growth","termid":"PBO:0029427"}


id: FYPO:0006943
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an 3'-5' RNA helicase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal 3'-5' RNA helicase activity","termid":"FYPO:0006943"}


id: GO:0045444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat.","definition_xrefs":["CL:0000136","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fat cell differentiation","synonyms":[{"name":"adipocyte cell differentiation","type":"exact"},{"name":"adipocyte differentiation","type":"exact"},{"name":"adipogenesis","type":"related"},{"name":"adipose cell differentiation","type":"exact"}],"termid":"GO:0045444"}


id: GO:0046085
data:
  {"annotated_genes":["SJAG_02959","SJAG_00044","SJAG_02582","SJAG_02580","SJAG_01070"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86600,109769,109770],"is_not":false,"summary":null,"term":"GO:0046085"},{"annotations":[84943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[83657,83658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[112920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving adenosine, adenine riboside, a ribonucleoside found widely distributed in cells of every type as the free nucleoside and in combination in nucleic acids and various nucleoside coenzymes.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside metabolic process","termid":"GO:0046128"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_01070":null,"SJAG_02580":null,"SJAG_02582":null,"SJAG_02959":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"adenosine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"adenosine metabolism","type":"exact"}],"termid":"GO:0046085","terms_by_termid":{"GO:0006154":null,"GO:0006169":null,"GO:0046085":null,"GO:0046086":null}}


id: PR:O74888
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bxi1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bax inhibitor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.04","synonyms":[{"name":"BH3 domain-containing protein bxi1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-bxi1","type":"exact"}],"termid":"PR:O74888"}


id: PBO:0088080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ub-ligase substrate-specificity factor; proteolytically-cleaved form acts as a pseudosubstrate, binding and altering the substrate specificity of Ubr1p towards misfolded and native ER membrane and cytosolic proteins, as part of the stress-induced homeostatically regulated protein degradation (SHRED) pathway; hydrophilin essential during desiccation-rehydration; induced by osmotic stress, starvation and during stationary phase; protein abundance increases in response to DNA replication stress","termid":"PBO:0088080"}


id: PBO:0087930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Trans-golgi network aminophospholipid translocase (flippase); type 4 P-type ATPase; involved in phospholipid translocation, contributing to the maintenance of membrane lipid asymmetry in post-Golgi secretory vesicles; role in protein trafficking between the Golgi and endosomal system; localizes to the trans-Golgi network; localizes to the shmoo tip where it has a redundant role in the cellular response to mating pheromone","termid":"PBO:0087930"}


id: GO:0102949
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isoorientin + an L-rhamonsylated rhamnosyl acceptor = isoorientin 2'-O-rhamnoside + a non rhamnosylated rhamnosyl acceptor.","definition_xrefs":["GOC:pz","PMID:15220389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"1,2-rhamnosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9082"],"termid":"GO:0102949"}


id: FYPO:0004827
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell dies as it goes through mitosis, usually as a result of abnormal chromosome and spindle dynamics.","definition_xrefs":["PomBase:mah","PMID:16824200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"inviable vegetative cell with cell death during mitosis","synonyms":[{"name":"inviable cell with cell death during mitosis during vegetative growth","type":"exact"},{"name":"inviable vegetative cell with cell death during mitosis during mitotic cell cycle","type":"related"},{"name":"lethal; vegetative cell with cell death during mitosis","type":"exact"}],"termid":"FYPO:0004827"}


id: MOD:01363
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to O4'-thiophospho-L-tyrosine.","definition_xrefs":["Unimod:260#Y","PubMed:12110917","PubMed:15549660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiophosphorylated residue","termid":"MOD:00583"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-thiophospho-L-tyrosine","synonyms":[{"name":"Thiophospho","type":"related"},{"name":"Thiophosphorylation","type":"related"}],"termid":"MOD:01363"}


id: GO:0002394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction taking place in the gut-associated lymphoid tissue (GALT).","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response in gut-associated lymphoid tissue","termid":"GO:0002387"},{"relation_name":"is_a","term_name":"tolerance induction in mucosal-associated lymphoid tissue","termid":"GO:0002401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction in gut-associated lymphoid tissue","synonyms":[{"name":"oral tolerance","type":"related"},{"name":"tolerance induction in GALT","type":"exact"}],"termid":"GO:0002394"}


id: PBO:0078915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 4-1","termid":"PBO:0078915"}


id: GO:0010931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involving any mechanism for tolerance induction in macrophages.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage tolerance induction","termid":"GO:0010931"}


id: PBO:0067844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 146","termid":"PBO:0067844"}


id: PBO:0004180
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.13.-","termid":"PBO:0004180"}


id: PBO:0029071
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_reactive_oxygen_species_level_during_vegetative_growth","termid":"PBO:0029071"}


id: GO:0019008
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that possesses molybdopterin synthase activity. In E. coli, the complex is a heterotetramer consisting of two MoaD and two MoaE subunits.","definition_xrefs":["PMID:15709772","PMID:12571227","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete molybdopterin synthase complex (obsolete GO:0019008)","synonyms":[{"name":"molybdopterin converting factor complex","type":"exact"}],"termid":"GO:0019008"}


id: GO:0001666
data:
  {"annotated_genes":["SJAG_01150","SJAG_00221","SJAG_01585","SJAG_03345","SJAG_00642","SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113063,97278,105901,107773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071456"},{"annotations":[112472,85325],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1900039"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating lowered oxygen tension. Hypoxia, defined as a decline in O2 levels below normoxic levels of 20.8 - 20.95%, results in metabolic adaptation at both the cellular and organismal level.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to decreased oxygen levels","termid":"GO:0036293"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00221":null,"SJAG_00642":null,"SJAG_01150":null,"SJAG_01585":null,"SJAG_03345":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hypoxia","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"response to hypoxic stress","type":"exact"},{"name":"response to intermittent hypoxia","type":"narrow"},{"name":"response to lowered oxygen tension","type":"exact"},{"name":"response to sustained hypoxia","type":"narrow"}],"termid":"GO:0001666","terms_by_termid":{"GO:0071456":null,"GO:1900039":null}}


id: PBO:0040311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit alpha pseudogene 3","termid":"PBO:0040311"}


id: FYPO:0007955
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which the rate or speed of microtubule polymerization, i.e. the additionl of tubulin dimers to a microtubule, is abnormal.","definition_xrefs":["PomBase:val","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule polymerization during vegetative growth","termid":"FYPO:0004614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000054","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal rate of microtubule polymerization during vegetative growth","synonyms":[{"name":"abnormal rate of microtubule polymerisation during vegetative growth","type":"exact"}],"termid":"FYPO:0007955"}


id: GO:0070477
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An intracellular part that represents the innermost portion of an endospore; the endospore core is dehydrated, enriched in dipicolinic acid and divalent cations, and metabolically inactive.","definition_xrefs":["PMID:15035041","PMID:18035610","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular anatomical structure","termid":"GO:0005622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"endospore core","termid":"GO:0070477"}


id: GO:0016945
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that modulates the rate of transcription elongation, the addition of ribonucleotides to an RNA molecule catalyzed by RNA polymerase III following transcription initiation.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase III transcription elongation factor activity (obsolete GO:0016945)","synonyms":[{"name":"Pol III transcription elongation factor activity","type":"exact"},{"name":"RNA polymerase III transcription elongation factor activity","type":"exact"}],"termid":"GO:0016945"}


id: PBO:0064782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPM1B divergent transcript","termid":"PBO:0064782"}


id: GO:0055045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the antipodal cells undergo programmed cell death.","definition_xrefs":["GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death involved in cell development","termid":"GO:0010623"},{"relation_name":"part_of","term_name":"megagametogenesis","termid":"GO:0009561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antipodal cell degeneration","termid":"GO:0055045"}


id: PBO:0086392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative component of the protein phosphatase type 2A complex","termid":"PBO:0086392"}


id: FYPO:0006354
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription is abnormal when the cell is subject to glucose starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription","termid":"FYPO:0005502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000294","FYPO:0000002","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"abnormal transcription during glucose starvation","synonyms":[{"name":"abnormal transcription during cellular response to glucose starvation","type":"exact"},{"name":"abnormal transcription during glucose depletion","type":"exact"},{"name":"abnormal transcription during glucose deprivation","type":"exact"},{"name":"abnormal transcription during glucose limitation","type":"related"},{"name":"abnormal transcription in response to glucose starvation","type":"exact"}],"termid":"FYPO:0006354"}


id: PBO:0068034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 339","termid":"PBO:0068034"}


id: PBO:0030483
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_sodium_export","termid":"PBO:0030483"}


id: PBO:0053739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 964","termid":"PBO:0053739"}


id: PATO:0002500
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed ventrolaterally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventrolaterally orientation","synonyms":[{"name":"ventrolaterally directed","type":"exact"}],"termid":"PATO:0002500"}


id: FYPO:0003361
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of superoxide dismutase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal superoxide dismutase activity","termid":"FYPO:0003361"}


id: MOD:00561
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["Unimod:211","PubMed:12766232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ethyl iodoacetamide-d0","synonyms":[{"name":"N-ethyl iodoacetamide-d0","type":"related"},{"name":"NEIAA","type":"related"}],"termid":"MOD:00561"}


id: PBO:0016926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein Mug99","termid":"PBO:0016926"}


id: PATO:0000333
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color pattern inhering in a bearer by virtue of bearer's being marked with a round area of different hue or degree of saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multi-colored","termid":"PATO:0001533"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spotted","termid":"PATO:0000333"}


id: GO:0042696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The beginning of the menstrual cycle; the first menstrual cycle in an individual.","definition_xrefs":["GOC:curators","PMID:16311040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"menstrual cycle phase","termid":"GO:0022601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"menarche","secondary_identifiers":["Wikipedia:Menarche"],"termid":"GO:0042696"}


id: PBO:0057960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3681 host gene","termid":"PBO:0057960"}


id: GO:0099636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed flow of cytosol (the liquid component of the cytoplasm) and the organelles it contains.","definition_xrefs":["GOC:dos","Wikipedia:Cytoplasmic_streaming&oldid=706214009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"cytoplasmic streaming","secondary_identifiers":["Wikipedia:Cytoplasmic_streaming"],"termid":"GO:0099636"}


id: MOD:01686
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces two alpha amino hydrogen atoms with two methyl group.","definition_xrefs":["OMSSA:38","Unimod:36#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dimethylated residue","termid":"MOD:00429"},{"relation_name":"is_a","term_name":"alpha-amino methylated residue","termid":"MOD:01460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"alpha-amino dimethylated residue","synonyms":[{"name":"Dimethyl","type":"related"},{"name":"N2Me2Res","type":"exact"},{"name":"di-Methylation","type":"related"},{"name":"ntermpepdimethyl","type":"exact"}],"termid":"MOD:01686"}


id: PBO:0045605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 16 (pseudogene)","termid":"PBO:0045605"}


id: PBO:0052197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium calcium-activated channel subfamily N member 1","termid":"PBO:0052197"}


id: GO:0016512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the formation of endothelin 1 by cleavage of the Trp21-Val22 bond in the precursor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endothelin-converting enzyme 1 activity (obsolete GO:0016512)","synonyms":[{"name":"ECE-1 activity","type":"related"},{"name":"endothelin-converting enzyme 1 activity","type":"exact"}],"termid":"GO:0016512"}


id: GO:0018042
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-histidine amide by hydrolysis and oxidation of an interior His-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0089"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-histidine amidation (obsolete GO:0018042)","termid":"GO:0018042"}


id: FYPO:0006271
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to floxuridine (5-fluoro-2'-deoxyuridine). Cells stop growing (and may die) at a concentration of floxuridine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to floxuridine","synonyms":[{"name":"hypersensitive to floxuridine","type":"exact"},{"name":"sensitive to 5-fluoro-2'-deoxyuridine","type":"exact"},{"name":"sensitive to 5-fluoro-2-deoxyuridine","type":"exact"},{"name":"sensitive to FUDR","type":"exact"},{"name":"sensitive to FdU","type":"exact"},{"name":"sensitive to floxuridin","type":"exact"},{"name":"sensitive to floxuridine during mitotic cell cycle","type":"related"},{"name":"sensitive to floxuridine during vegetative growth","type":"exact"}],"termid":"FYPO:0006271"}


id: PBO:0057177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 329-1","termid":"PBO:0057177"}


id: PBO:0027478
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cytokinesis_checkpoint","termid":"PBO:0027478"}


id: PBO:0085780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of the endoplasmic reticulum; required for GPI-phospholipase A2 activity that remodels the GPI anchor as a prerequisite for association of GPI-anchored proteins with lipid rafts; functionally complemented by human ortholog PERLD1","termid":"PBO:0085780"}


id: GO:1905160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of Factor XII activation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:617517"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Factor XII activation (obsolete GO:1905160)","synonyms":[{"name":"activation of Factor XII activation","type":"narrow"},{"name":"activation of Hageman factor activation","type":"narrow"},{"name":"positive regulation of Hageman factor activation","type":"exact"},{"name":"up regulation of Factor XII activation","type":"exact"},{"name":"up regulation of Hageman factor activation","type":"exact"},{"name":"up-regulation of Factor XII activation","type":"exact"},{"name":"up-regulation of Hageman factor activation","type":"exact"},{"name":"upregulation of Factor XII activation","type":"exact"},{"name":"upregulation of Hageman factor activation","type":"exact"}],"termid":"GO:1905160"}


id: PBO:0109953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC51 subunit beta","termid":"PBO:0109953"}


id: GO:1902178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An apoptotic signaling pathway that starts with a ligand binding to, or being withdrawn from, a fibroblast growth factor receptor (FGFR).","definition_xrefs":["GOC:mtg_apoptosis","GOC:pr","GOC:TermGenie","GOC:pm","PMID:17561467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"is_a","term_name":"extrinsic apoptotic signaling pathway","termid":"GO:0097191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"fibroblast growth factor receptor apoptotic signaling pathway","synonyms":[{"name":"FGF receptor signaling pathway involved in apoptosis","type":"narrow"},{"name":"FGF receptor signaling pathway involved in apoptotic cell death","type":"exact"},{"name":"FGF receptor signaling pathway involved in apoptotic process","type":"exact"},{"name":"FGF receptor signaling pathway involved in apoptotic program","type":"narrow"},{"name":"FGF receptor signaling pathway involved in apoptotic programmed cell death","type":"exact"},{"name":"FGF receptor signaling pathway involved in programmed cell death by apoptosis","type":"exact"},{"name":"FGF receptor signaling pathway involved in signaling (initiator) caspase activity","type":"related"},{"name":"FGF receptor signaling pathway involved in type I programmed cell death","type":"narrow"},{"name":"FGF receptor signalling pathway involved in apoptosis","type":"narrow"},{"name":"FGF receptor signalling pathway involved in apoptotic cell death","type":"exact"},{"name":"FGF receptor signalling pathway involved in apoptotic process","type":"exact"},{"name":"FGF receptor signalling pathway involved in apoptotic program","type":"narrow"},{"name":"FGF receptor signalling pathway involved in apoptotic programmed cell death","type":"exact"},{"name":"FGF receptor signalling pathway involved in programmed cell death by apoptosis","type":"exact"},{"name":"FGF receptor signalling pathway involved in signaling (initiator) caspase activity","type":"related"},{"name":"FGF receptor signalling pathway involved in type I programmed cell death","type":"narrow"},{"name":"FGFR signaling pathway involved in apoptosis","type":"narrow"},{"name":"FGFR signaling pathway involved in apoptotic cell death","type":"exact"},{"name":"FGFR signaling pathway involved in apoptotic process","type":"exact"},{"name":"FGFR signaling pathway involved in apoptotic program","type":"narrow"},{"name":"FGFR signaling pathway involved in apoptotic programmed cell death","type":"exact"},{"name":"FGFR signaling pathway involved in programmed cell death by apoptosis","type":"exact"},{"name":"FGFR signaling pathway involved in signaling (initiator) caspase activity","type":"related"},{"name":"FGFR signaling pathway involved in type I programmed cell death","type":"narrow"},{"name":"fibroblast growth factor receptor signaling pathway involved in apoptosis","type":"narrow"},{"name":"fibroblast growth factor receptor signaling pathway involved in apoptotic cell death","type":"exact"},{"name":"fibroblast growth factor receptor signaling pathway involved in apoptotic process","type":"exact"},{"name":"fibroblast growth factor receptor signaling pathway involved in apoptotic program","type":"narrow"},{"name":"fibroblast growth factor receptor signaling pathway involved in apoptotic programmed cell death","type":"exact"},{"name":"fibroblast growth factor receptor signaling pathway involved in programmed cell death by apoptosis","type":"exact"},{"name":"fibroblast growth factor receptor signaling pathway involved in signaling (initiator) caspase activity","type":"related"},{"name":"fibroblast growth factor receptor signaling pathway involved in type I programmed cell death","type":"narrow"},{"name":"fibroblast growth factor receptor signalling pathway involved in apoptosis","type":"narrow"},{"name":"fibroblast growth factor receptor signalling pathway involved in apoptotic cell death","type":"exact"},{"name":"fibroblast growth factor receptor signalling pathway involved in apoptotic process","type":"exact"},{"name":"fibroblast growth factor receptor signalling pathway involved in apoptotic program","type":"narrow"},{"name":"fibroblast growth factor receptor signalling pathway involved in apoptotic programmed cell death","type":"exact"},{"name":"fibroblast growth factor receptor signalling pathway involved in programmed cell death by apoptosis","type":"exact"},{"name":"fibroblast growth factor receptor signalling pathway involved in signaling (initiator) caspase activity","type":"related"},{"name":"fibroblast growth factor receptor signalling pathway involved in type I programmed cell death","type":"narrow"}],"termid":"GO:1902178"}


id: FYPO:0000169
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at subtelomeric regions is abnormal. Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing","termid":"FYPO:0000144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"abnormal chromatin silencing at subtelomere","synonyms":[{"name":"abnormal chromatin silencing at subtelomere during mitotic cell cycle","type":"related"},{"name":"abnormal chromatin silencing at telomere","type":"related"},{"name":"abnormal chromatin silencing at telomere during vegetative growth","type":"exact"}],"termid":"FYPO:0000169"}


id: GO:1901974
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of glycerate from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","PMID:23382251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"aldonate transmembrane transporter activity","termid":"GO:0042879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"glycerate transmembrane transporter activity","termid":"GO:1901974"}


id: GO:0140658
data:
  {"annotated_genes":["SJAG_03036","SJAG_03613","SJAG_02575","SJAG_02872","SJAG_00500","SJAG_00475","SJAG_04147","SJAG_02571","SJAG_04114","SJAG_02521","SJAG_02460","SJAG_04755","SJAG_00111","SJAG_01878","SJAG_02906","SJAG_04692","SJAG_01653","SJAG_00980","SJAG_04038","SJAG_04355","SJAG_02798","SJAG_01938","SJAG_00650","SJAG_02698","SJAG_03982","SJAG_05313","SJAG_00925"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84702,84963,85360,86132,86265,89299,91538,93157,97753,101516,103003,107307,108307,112780,112781,114990],"is_not":false,"summary":null,"term":"GO:0140658"},{"annotations":[84053,94303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140849"},{"annotations":[92514,90672,99630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140665"},{"annotations":[109154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140674"},{"annotations":[84233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140751"},{"annotations":[110191,84234,90676,109369,111081,88655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140750"}]},"cv_name":"molecular_function","definition":"An activity, driven by ATP hydrolysis, that modulates the contacts between histones and DNA, resulting in a change in chromosome architecture within the nucleosomal array, leading to chromatin remodeling.","definition_xrefs":["PMID:19165147","PMID:34313222","PMID:14729263","PMID:21862382","PMID:30867599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on DNA","termid":"GO:0008094"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00111":null,"SJAG_00475":null,"SJAG_00500":null,"SJAG_00650":null,"SJAG_00925":null,"SJAG_00980":null,"SJAG_01653":null,"SJAG_01878":null,"SJAG_01938":null,"SJAG_02460":null,"SJAG_02521":null,"SJAG_02571":null,"SJAG_02575":null,"SJAG_02698":null,"SJAG_02798":null,"SJAG_02872":null,"SJAG_02906":null,"SJAG_03036":null,"SJAG_03613":null,"SJAG_03982":null,"SJAG_04038":null,"SJAG_04114":null,"SJAG_04147":null,"SJAG_04355":null,"SJAG_04692":null,"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"ATP-dependent chromatin remodeler activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0070615"],"synonyms":[{"name":"ATP hydrolysis-dependent chromatin remodeler activity","type":"exact"},{"name":"ATP-dependent chromatin remodeller activity","type":"exact"},{"name":"ATP-dependent chromatin remodelling","type":"related"},{"name":"ATPase-dependent chromatin remodeler activity","type":"exact"},{"name":"nucleosome-activated ATPase activity","type":"related"},{"name":"nucleosome-dependent ATPase activity","type":"related"}],"termid":"GO:0140658","terms_by_termid":{"GO:0140658":null,"GO:0140665":null,"GO:0140674":null,"GO:0140750":null,"GO:0140751":null,"GO:0140849":null}}


id: PBO:0016064
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pombe Response Regulator","termid":"PBO:0016064"}


id: PBO:0082829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved protein involved in exocytic transport from the Golgi; mutation is synthetically lethal with apl2 vps1 double mutation; member of a protein superfamily with orthologs in diverse organisms; relocalizes from bud neck to cytoplasm upon DNA replication stress","termid":"PBO:0082829"}


id: PBO:0039270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldolase, fructose-bisphosphate B","termid":"PBO:0039270"}


id: PBO:0078344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 10-1","termid":"PBO:0078344"}


id: PBO:0058273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4650-2","termid":"PBO:0058273"}


id: PBO:0057634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1224","termid":"PBO:0057634"}


id: GO:1904176
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of carbon phosphorus lyase activity.","definition_xrefs":["GOC:TermGenie","PMID:17993513","PMID:22089136","PMID:21705661","PMID:23830682","GOC:bhm","GO_REF:0000088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"carbon phosphorus lyase complex","termid":"GO:1904176"}


id: GO:0102987
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: palmitoleoyl-CoA + O2 + a reduced electron acceptor = (9Z,12Z)-hexadecadienoyl-CoA + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete palmitoleic acid delta 12 desaturase activity (obsolete GO:0102987)","termid":"GO:0102987"}


id: GO:0021689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the cerebellar molecular layer. This process pertains to the physical shaping of a rudimentary structure. The molecular layer is the outermost layer of the cerebellar cortex. It contains the parallel fibers of the granule cells, interneurons such as stellate and basket cells, and the dendrites of the underlying Purkinje cells.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:cls","ISBN:0838580343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure arrangement","termid":"GO:0048532"},{"relation_name":"part_of","term_name":"cerebellar molecular layer morphogenesis","termid":"GO:0021687"},{"relation_name":"part_of","term_name":"cerebellar cortex structural organization","termid":"GO:0021698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar molecular layer structural organization","synonyms":[{"name":"cerebellar molecular layer structural organisation","type":"exact"}],"termid":"GO:0021689"}


id: GO:0016230
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of the enzyme sphingomyelin phosphodiesterase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase activator activity","termid":"GO:0016004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0140677","GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"sphingomyelin phosphodiesterase activator activity","synonyms":[{"name":"neutral sphingomyelinase activator","type":"exact"}],"termid":"GO:0016230"}


id: GO:0005568
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial rRNA (obsolete GO:0005568)","synonyms":[{"name":"mitochondrial rRNA","type":"exact"}],"termid":"GO:0005568"}


id: FYPO:0005650
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which premeiotic DNA replication begins at the normal (i.e. indistinguishable from wild type) time relative to other cell cycle events.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal premeiotic DNA replication","termid":"FYPO:0002043"},{"relation_name":"is_a","term_name":"normal cellular process during meiotic cell cycle","termid":"FYPO:0007277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal onset of premeiotic DNA replication","synonyms":[{"name":"normal timing of premeiotic DNA replication","type":"related"}],"termid":"FYPO:0005650"}


id: PBO:0063925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide-3-kinase regulatory subunit 4","termid":"PBO:0063925"}


id: FYPO:0005962
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of sodium ions into a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal sodium import","synonyms":[{"name":"abnormal cellular sodium import","type":"exact"},{"name":"abnormal sodium import across plasma membrane","type":"exact"},{"name":"abnormal sodium import during mitotic cell cycle","type":"related"},{"name":"abnormal sodium import during vegetative growth","type":"exact"},{"name":"abnormal sodium import into cell","type":"exact"},{"name":"abnormal sodium ion import","type":"exact"}],"termid":"FYPO:0005962"}


id: PBO:0027980
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glutathione_disulfide_oxidoreductase_activity","termid":"PBO:0027980"}


id: GO:1905289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of CAMKK-AMPK signaling cascade.","definition_xrefs":["GOC:TermGenie","PMID:22128786","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium-mediated signaling","termid":"GO:0050848"},{"relation_name":"regulates","term_name":"CAMKK-AMPK signaling cascade","termid":"GO:0061762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of CAMKK-AMPK signaling cascade","synonyms":[{"name":"regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"}],"termid":"GO:1905289"}


id: GO:0042625
data:
  {"annotated_genes":["SJAG_04015","SJAG_01913","SJAG_00516","SJAG_03406","SJAG_04955","SJAG_05294","SJAG_02023","SJAG_00212","SJAG_01471","SJAG_02782","SJAG_01447","SJAG_01397","SJAG_01817","SJAG_00136"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84107,85914,105925,114795,86224,97697,94977,96000,96076,92682,98736,99978,91719,88100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046961"}]},"cv_name":"molecular_function","definition":"Enables the transfer of an ion from one side of a membrane to the other, driven by the reaction: ATP + H2O = ADP + phosphate.","definition_xrefs":["ISBN:0815340729","GOC:jl","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled transmembrane transporter activity","termid":"GO:0042626"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_04015":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ATPase-coupled ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent ion transmembrane transporter activity","type":"exact"},{"name":"ATPase activity, coupled to transmembrane movement of ions","type":"exact"},{"name":"ATPase coupled ion transmembrane transporter activity","type":"exact"}],"termid":"GO:0042625","terms_by_termid":{"GO:0046961":null}}


id: GO:0007244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. MAPKKK cascade involved in transduction of mating pheromone signal, as described in Saccharomyces.","definition_xrefs":["PMID:9561267"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPKKK cascade (mating sensu Saccharomyces) (obsolete GO:0007244)","synonyms":[{"name":"MAPKKK cascade (mating sensu Saccharomyces)","type":"exact"}],"termid":"GO:0007244"}


id: GO:0004643
data:
  {"annotated_genes":["SJAG_04681"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115051],"is_not":false,"summary":null,"term":"GO:0004643"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-formyltetrahydrofolate + 5'-phosphoribosyl-5-amino-4-imidazolecarboxamide = tetrahydrofolate + 5'-phosphoribosyl-5-formamido-4-imidazolecarboxamide.","definition_xrefs":["EC:2.1.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04681":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"phosphoribosylaminoimidazolecarboxamide formyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-73798","RHEA:22192","MetaCyc:AICARTRANSFORM-RXN"],"synonyms":[{"name":"10-formyltetrahydrofolate:5'-phosphoribosyl-5-amino-4-imidazole-carboxamide N-formyltransferase activity","type":"related"},{"name":"10-formyltetrahydrofolate:5'-phosphoribosyl-5-amino-4-imidazolecarboxamide formyltransferase activity","type":"related"},{"name":"5'-phosphoribosyl-5-amino-4-imidazolecarboxamide formyltransferase activity","type":"related"},{"name":"5-amino-1-ribosyl-4-imidazolecarboxamide 5'-phosphate transformylase activity","type":"related"},{"name":"5-amino-4-imidazolecarboxamide ribonucleotide transformylase activity","type":"related"},{"name":"5-amino-4-imidazolecarboxamide ribotide transformylase activity","type":"related"},{"name":"AICAR formyltransferase activity","type":"related"},{"name":"AICAR transformylase activity","type":"related"},{"name":"aminoimidazolecarboxamide ribonucleotide transformylase activity","type":"related"}],"termid":"GO:0004643","terms_by_termid":{"GO:0004643":null}}


id: PBO:0090520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase","termid":"PBO:0090520"}


id: PBO:0044609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 13","termid":"PBO:0044609"}


id: PBO:0082368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic helix-loop-helix (bHLH) protein; forms homodimer to bind E-box consensus sequence CACGTG present at MET gene promoters and centromere DNA element I (CDEI); affects nucleosome positioning at this motif; associates with other transcription factors such as Met4p and Isw1p to mediate transcriptional activation or repression; associates with kinetochore proteins, required for chromosome segregation; protein abundance increases in response to DNA replication stress","termid":"PBO:0082368"}


id: PBO:0084864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; contains twin cysteine-x9-cysteine motifs; oxidized by Mia40p during import into mitochondria","termid":"PBO:0084864"}


id: GO:0034615
data:
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id: PBO:0075964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"StAR related lipid transfer domain containing 5","termid":"PBO:0075964"}


id: PBO:0028696
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_silencing_at_telomere","termid":"PBO:0028696"}


id: GO:0097367
data:
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id: GO:0043747
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id: PomGeneEx:0000003
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id: GO:0097644
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id: CHEBI:16027
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id: GO:1904074
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id: GO:0060641
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id: GO:0052929
data:
  {"annotated_genes":["SJAG_01704","SJAG_02288"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69450,113998],"is_not":false,"summary":null,"term":"GO:0052929"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a tRNA with a 3' CC end + ATP = a tRNA with a 3' CCA end + diphosphate.","definition_xrefs":["RHEA:60012","PMID:33095240","PMID:31936900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01704":null,"SJAG_02288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0140101","GO:0003674","GO:0140098","GO:0016779","GO:0003824"],"is_obsolete":false,"name":"ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R09386"],"synonyms":[{"name":"ATP:3'-CC-tRNA adenylyltransferase activity","type":"exact"},{"name":"ATP:tRNA adenylyltransferase activity","type":"broad"}],"termid":"GO:0052929","terms_by_termid":{"GO:0052929":null}}


id: FYPO:0003629
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which spliceosomal tri-snRNP complex assembly is abolished.","definition_xrefs":["PMID:12374752","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex assembly","termid":"FYPO:0003628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished U2/U5/U6 snRNP complex assembly","synonyms":[{"name":"U2/U5/U6 snRNP complex assembly abolished","type":"exact"},{"name":"abolished U2/U5/U6 snRNP complex assembly during mitotic cell cycle","type":"related"},{"name":"abolished U2/U5/U6 snRNP complex assembly during vegetative growth","type":"exact"},{"name":"abolished U2/U5/U6 tri-snRNP complex assembly abolished","type":"exact"}],"termid":"FYPO:0003629"}


id: PBO:0029732
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_aculeacin_A","termid":"PBO:0029732"}


id: PBO:0043027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 2B","termid":"PBO:0043027"}


id: PBO:0054050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1392","termid":"PBO:0054050"}


id: PBO:0057026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR124-2 host gene","termid":"PBO:0057026"}


id: PBO:0063442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 6D","termid":"PBO:0063442"}


id: GO:0048765
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a root hair cell.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"root epidermal cell differentiation","termid":"GO:0010053"},{"relation_name":"is_a","term_name":"trichoblast maturation","termid":"GO:0048764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root hair cell differentiation","termid":"GO:0048765"}


id: PBO:0040010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 17B","termid":"PBO:0040010"}


id: GO:0030566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Specifies the site of a posttranscriptional modification in an snRNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["GOC:mah","PMID:12457565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"},{"relation_name":"is_a","term_name":"RNA modification guide activity","termid":"GO:0030555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"snRNA modification guide activity","termid":"GO:0030566"}


id: GO:0098699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a presynaptic actin cytoskeleton.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of cytoskeleton","termid":"GO:0005200"},{"relation_name":"is_a","term_name":"structural constituent of presynapse","termid":"GO:0099181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of presynaptic actin cytoskeleton","termid":"GO:0098699"}


id: PBO:0084604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YOR088W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YOR087W","termid":"PBO:0084604"}


id: GO:0042190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of vanillin, an aromatic hydrocarbon which occurs naturally in black vanilla bean pods.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vanillin metabolic process","termid":"GO:0018982"},{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"aldehyde catabolic process","termid":"GO:0046185"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"vanillin catabolic process","synonyms":[{"name":"vanillic aldehyde catabolic process","type":"exact"},{"name":"vanillic aldehyde catabolism","type":"exact"},{"name":"vanillin breakdown","type":"exact"},{"name":"vanillin catabolism","type":"exact"},{"name":"vanillin degradation","type":"exact"}],"termid":"GO:0042190"}


id: GO:0015761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which mannose is transported across a lipid bilayer, from one side of a membrane to the other. Mannose is the aldohexose manno-hexose, the C-2 epimer of glucose. The D-(+)-form is widely distributed in mannans and hemicelluloses and is of major importance in the core oligosaccharide of N-linked oligosaccharides of glycoproteins.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"mannose transmembrane transport","synonyms":[{"name":"mannose transport","type":"related"}],"termid":"GO:0015761"}


id: GO:0062034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-pipecolic acid, a metabolite of lysine.","definition_xrefs":["PMID:28330936","PMID:27758894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-pipecolic acid biosynthetic process","synonyms":[{"name":"L-pipecolate biosynthetic process","type":"exact"}],"termid":"GO:0062034"}


id: GO:0032399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a HECT, 'Homologous to the E6-AP Carboxy-Terminus', domain of a protein.","definition_xrefs":["GOC:mah","Pfam:PF00632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"HECT domain binding","termid":"GO:0032399"}


id: PBO:0028672
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_level_during_meiosis","termid":"PBO:0028672"}


id: PBO:0086442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative lipase; involved in lipid metabolism; not an essential gene; YDL109C has a paralog, ROG1, that arose from the whole genome duplication","termid":"PBO:0086442"}


id: PBO:0062724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily A member 1","termid":"PBO:0062724"}


id: FYPO:0001558
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of methionine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import","termid":"FYPO:0001058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased methionine import","synonyms":[{"name":"decreased L-methionine import","type":"exact"},{"name":"decreased L-methionine import across plasma membrane","type":"exact"},{"name":"decreased methionine import into cell","type":"exact"},{"name":"decreased methionine transport into cell","type":"exact"},{"name":"decreased methionine uptake","type":"exact"},{"name":"reduced methionine import","type":"exact"},{"name":"reduced methionine uptake","type":"exact"}],"termid":"FYPO:0001558"}


id: GO:0043818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADH + O2 + precorrin-3A = H2O + NAD+ + precorrin-3B.","definition_xrefs":["RHEA:17293","EC:1.14.13.83"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"precorrin-3B synthase activity","secondary_identifiers":["KEGG_REACTION:R05217","MetaCyc:R321-RXN"],"synonyms":[{"name":"CobG","type":"related"},{"name":"precorrin-3A,NADH:oxygen oxidoreductase (20-hydroxylating)","type":"exact"},{"name":"precorrin-3X synthase activity","type":"related"}],"termid":"GO:0043818"}


id: GO:2000873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H4 acetylation involved in response to DNA damage stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H4 acetylation involved in response to DNA damage stimulus (obsolete GO:2000873)","synonyms":[{"name":"regulation of histone H4 acetylation involved in DNA damage response","type":"exact"},{"name":"regulation of histone H4 acetylation involved in cellular DNA damage response","type":"exact"},{"name":"regulation of histone H4 acetylation involved in cellular response to DNA damage stimulus","type":"exact"},{"name":"regulation of histone H4 acetylation involved in response to DNA damage","type":"exact"},{"name":"regulation of histone H4 acetylation involved in response to genotoxic stress","type":"exact"}],"termid":"GO:2000873"}


id: GO:0047299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: keto-phenylpyruvate + L-tryptophan = 3-(indol-3-yl)pyruvate + L-phenylalanine.","definition_xrefs":["RHEA:13741","EC:2.6.1.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016769"],"is_obsolete":false,"name":"tryptophan-phenylpyruvate transaminase activity","secondary_identifiers":["KEGG_REACTION:R01376","MetaCyc:2.6.1.28-RXN"],"synonyms":[{"name":"L-tryptophan-alpha-ketoisocaproate aminotransferase activity","type":"related"},{"name":"L-tryptophan:phenylpyruvate aminotransferase activity","type":"related"},{"name":"tryptophan--phenylpyruvate aminotransferase activity","type":"related"},{"name":"tryptophan-phenylpyruvate aminotransferase activity","type":"exact"}],"termid":"GO:0047299"}


id: PBO:0069549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 820, pseudogene","termid":"PBO:0069549"}


id: PBO:0089268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Puf6","termid":"PBO:0089268"}


id: PBO:0051355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR2-7D (pseudogene)","termid":"PBO:0051355"}


id: PBO:0112790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, phosphate quality regulator Pqr1/Spx1","termid":"PBO:0112790"}


id: PBO:0053673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 856","termid":"PBO:0053673"}


id: GO:0106379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 8-oxo-(d)RTP + H20 = 8-oxo-(d)RMP + diphosphate + H+.","definition_xrefs":["PMID:11139615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0047429","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"8-oxo-(d)RTP hydrolase activity","secondary_identifiers":["Reactome:R-HSA-9731228"],"termid":"GO:0106379"}


id: GO:2001109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lens epithelial cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"lens epithelial cell proliferation","termid":"GO:0097166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lens epithelial cell proliferation","termid":"GO:2001109"}


id: PBO:0038279
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"source_file","termid":"PBO:0038279"}


id: PBO:0029367
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_protein_localization_to_actomyosin_contractile_ring","termid":"PBO:0029367"}


id: GO:0014036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a neural crest cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:ef","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell fate specification","termid":"GO:0048866"},{"relation_name":"part_of","term_name":"neural crest cell fate commitment","termid":"GO:0014034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest cell fate specification","termid":"GO:0014036"}


id: GO:0006152
data:
  {"annotated_genes":["SJAG_00957","SJAG_01359","SJAG_04927","SJAG_02580","SJAG_02959"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86710,87126,108234],"is_not":false,"summary":null,"term":"GO:0006152"},{"annotations":[83658,83657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine nucleoside, one of a family of organic molecules consisting of a purine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside catabolic process","termid":"GO:0009164"},{"relation_name":"is_a","term_name":"purine nucleoside metabolic process","termid":"GO:0042278"},{"relation_name":"is_a","term_name":"purine-containing compound catabolic process","termid":"GO:0072523"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01359":null,"SJAG_02580":null,"SJAG_02959":null,"SJAG_04927":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine nucleoside catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"purine nucleoside breakdown","type":"exact"},{"name":"purine nucleoside catabolism","type":"exact"},{"name":"purine nucleoside degradation","type":"exact"}],"termid":"GO:0006152","terms_by_termid":{"GO:0006152":null,"GO:0006154":null}}


id: PBO:0048563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated, gamma adaptin ear containing, ARF binding protein 1","termid":"PBO:0048563"}


id: PR:Q09871
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC12G12.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C12G12.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.07c","synonyms":[{"name":"Spom972h-SPAC12G12.07c","type":"exact"}],"termid":"PR:Q09871"}


id: PR:Q9USQ7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dph6 gene.","definition_xrefs":["UniProtKB:Q9USQ7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthine--ammonia ligase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.12","synonyms":[{"name":"Spom972h-dph6","type":"exact"},{"name":"diphthamide synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"diphthamide synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USQ7"}


id: PBO:0046161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELF2 pseudogene 1","termid":"PBO:0046161"}


id: GO:0004165
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: a (3Z)-enoyl-CoA = a 4-saturated (2E)-enoyl-CoA or a (3E)-enoyl-CoA = a 4-saturated (2E)-enoyl-CoA.","definition_xrefs":["RHEA:45900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"delta(3)-delta(2)-enoyl-CoA isomerase activity","secondary_identifiers":["EC:5.3.3.8","Reactome:R-HSA-109338","Reactome:R-HSA-6809808","GO:0008461"],"synonyms":[{"name":"3,2-trans-enoyl-CoA isomerase activity","type":"related"},{"name":"acetylene-allene isomerase activity","type":"related"},{"name":"delta(3),delta(2)-enoyl-CoA isomerase activity","type":"related"},{"name":"delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase activity","type":"related"},{"name":"delta3,delta2-enoyl-CoA isomerase activity","type":"related"},{"name":"delta3-cis-delta2-trans-enoyl-CoA isomerase","type":"exact"},{"name":"delta3-delta2 enoyl-CoA isomerase activity","type":"exact"},{"name":"dodecenoyl-CoA (3Z)-(2E)-isomerase activity","type":"narrow"},{"name":"dodecenoyl-CoA D-isomerase activity","type":"narrow"},{"name":"dodecenoyl-CoA delta-isomerase activity","type":"narrow"},{"name":"dodecenoyl-CoA delta3-cis-delta2-trans-isomerase activity","type":"narrow"},{"name":"dodecenoyl-CoA isomerase activity","type":"related"}],"termid":"GO:0004165"}


id: PBO:0086429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative hydrolase acting on ester bonds","termid":"PBO:0086429"}


id: PBO:0071802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulation of nuclear pre-mRNA domain containing 2","termid":"PBO:0071802"}


id: PBO:0088682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP III complex subunit Trs85b","termid":"PBO:0088682"}


id: GO:1902748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lens fiber cell differentiation.","definition_xrefs":["GOC:mr","GO_REF:0000058","PMID:17592637","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of lens fiber cell differentiation","termid":"GO:1902746"},{"relation_name":"positively_regulates","term_name":"lens fiber cell differentiation","termid":"GO:0070306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lens fiber cell differentiation","synonyms":[{"name":"activation of lens fiber cell differentiation","type":"narrow"},{"name":"activation of lens fibre cell differentiation","type":"narrow"},{"name":"positive regulation of lens fibre cell differentiation","type":"exact"},{"name":"up regulation of lens fiber cell differentiation","type":"exact"},{"name":"up regulation of lens fibre cell differentiation","type":"exact"},{"name":"up-regulation of lens fiber cell differentiation","type":"exact"},{"name":"up-regulation of lens fibre cell differentiation","type":"exact"},{"name":"upregulation of lens fiber cell differentiation","type":"exact"},{"name":"upregulation of lens fibre cell differentiation","type":"exact"}],"termid":"GO:1902748"}


id: FYPO:0004310
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the duration of M phase of the mitotic cell cycle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle phase","termid":"FYPO:0002740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal duration of mitotic M phase","secondary_identifiers":["FYPO:0005632"],"synonyms":[{"name":"normal duration of M phase of mitotic cell cycle","type":"exact"},{"name":"normal duration of mitosis","type":"related"},{"name":"normal duration of mitosis during vegetative growth","type":"related"},{"name":"normal duration of mitotic division","type":"related"},{"name":"normal duration of mitotic nuclear division","type":"related"}],"termid":"FYPO:0004310"}


id: MOD:01399
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to an N6-(ADP-ribosyl)-L-lysine.","definition_xrefs":["RESID:AA0476","PubMed:18436469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-(ADP-ribosyl)-L-lysine","synonyms":[{"name":"(S)-2-amino-6-([adenosine 5'-(trihydrogen diphosphate) 5'->5'-ester with alpha-D-ribofuranosyl]amino)hexanoic acid","type":"exact"},{"name":"2-amino-6-(ADP-ribosyl)amino-hexanoic acid","type":"exact"},{"name":"MOD_RES N6-(ADP-ribosyl)lysine","type":"exact"},{"name":"N(zeta)-ADP-ribosyllysine","type":"exact"},{"name":"N6-(ADP-ribosyl)-L-lysine","type":"exact"},{"name":"N6-[alpha-D-ribofuranoside 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)]-L-lysine","type":"exact"},{"name":"N6-alpha-D-ribofuranosyl-L-lysine 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)","type":"exact"},{"name":"epsilon-ADP-ribosyllysine","type":"exact"}],"termid":"MOD:01399"}


id: MOD:00832
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-(N-acetaminogalactosyl)-L-asparagine.","definition_xrefs":["RESID:AA0420","PubMed:8262914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminogalactosylated residue","termid":"MOD:00563"},{"relation_name":"is_a","term_name":"N4-(N-acetylamino)hexosyl-L-asparagine","termid":"MOD:01674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"N4-(N-acetylamino)galactosyl-L-asparagine","synonyms":[{"name":"(2S)-2-amino-4-(2-acetamido-2-deoxy-beta-D-galactopyranosyl)amino-4-oxobutanoic acid","type":"exact"},{"name":"CARBOHYD N-linked (GalNAc) asparagine","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"N4-(2-acetamido-2-deoxy-beta-D-galactopyranosyl)-L-asparagine","type":"exact"},{"name":"N4-(2-acetylamino-2-deoxy-beta-D-galactopyranosyl)-L-asparagine","type":"exact"},{"name":"N4-(N-acetylamino)galactosyl-L-asparagine","type":"exact"},{"name":"N4-(N-acetylgalactosaminyl)asparagine","type":"exact"},{"name":"N4-asparagine-beta-N-acetylgalactosaminide","type":"exact"},{"name":"N4-glycosyl-L-asparagine","type":"exact"},{"name":"N4-glycosylasparagine","type":"exact"},{"name":"N4GalNAcAsn","type":"exact"}],"termid":"MOD:00832"}


id: GO:0110064
data:
  {"annotated_genes":["SJAG_02622"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114174],"is_not":false,"summary":null,"term":"GO:0110064"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lncRNAs, non-coding RNAs over 200 nucleotides in length.","definition_xrefs":["GOC:al","PMID:24493644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lncRNA catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"lncRNA breakdown","type":"exact"},{"name":"lncRNA catabolism","type":"exact"},{"name":"lncRNA degradation","type":"exact"}],"termid":"GO:0110064","terms_by_termid":{"GO:0110064":null}}


id: PBO:0082775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the SSU and 90S preribosomes; involved in pre-18S rRNA processing; binds to U3 snoRNA and Mpp10p; multicopy suppressor of sensitivity to Brefeldin A; expression is induced during lag phase and also by cold shock","termid":"PBO:0082775"}


id: PBO:0053559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 567","termid":"PBO:0053559"}


id: GO:0030321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of chloride ions from one side of an epithelium to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride transport","termid":"GO:0006821"},{"relation_name":"is_a","term_name":"transepithelial transport","termid":"GO:0070633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"transepithelial chloride transport","termid":"GO:0030321"}


id: GO:0016236
data:
  {"annotated_genes":["SJAG_01561","SJAG_00380","SJAG_00850","SJAG_00059","SJAG_02525","SJAG_01467","SJAG_00763","SJAG_04219","SJAG_00029","SJAG_00645","SJAG_04655","SJAG_05017","SJAG_02100","SJAG_00114","SJAG_02852","SJAG_04963","SJAG_02441","SJAG_02699","SJAG_01783","SJAG_04294","SJAG_01716","SJAG_01274","SJAG_04023","SJAG_01367","SJAG_00115","SJAG_04021","SJAG_03100","SJAG_03851","SJAG_04860","SJAG_00355","SJAG_03170","SJAG_00732","SJAG_01135","SJAG_03136","SJAG_04232","SJAG_02539","SJAG_02723","SJAG_01722","SJAG_01876","SJAG_05289","SJAG_03435","SJAG_03467","SJAG_00820","SJAG_04552","SJAG_02655","SJAG_01283","SJAG_01251","SJAG_02663","SJAG_02433","SJAG_03718","SJAG_04496","SJAG_04435","SJAG_04502","SJAG_01382","SJAG_06309","SJAG_02640","SJAG_01415","SJAG_05261","SJAG_00079","SJAG_04837","SJAG_03345","SJAG_04991","SJAG_02414","SJAG_00053","SJAG_01073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[83902,84733,86145,87055,87666,88673,88960,89582,89977,90688,90870,93380,93654,93668,93937,94668,95170,96039,96347,97179,98194,98595,99654,99807,100942,101010,104615,104705,105823,105859,105879,106330,106721,107579,107753,109714,111231,113886],"is_not":false,"summary":null,"term":"GO:0016236"},{"annotations":[87664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035973"},{"annotations":[87665,100654,88959,96038,90685,86141,90869,71637,109907,88671,105820,113885,105475,83900,92699,93936,93651,99653,107752,109712],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000045"},{"annotations":[109713,85322,86142],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0097352"},{"annotations":[90686],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016240"},{"annotations":[86144,94667,93667,104703,105822,96346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061723"},{"annotations":[95759,93938,107754,87667,88961,96040,106722,85110,86033,91026,83903,90689,110603,100878,113887,99655,88674,109716,111294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000423"},{"annotations":[102697],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0016242"},{"annotations":[104616,96348,105824,94669,93669,95459],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044804"},{"annotations":[98195,104706,96041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000425"},{"annotations":[104260,89981,93939,87668,90306,96042,113888,86146,104707,107755,83904,112298,99656,95760,71639,100879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034727"},{"annotations":[104617,104708],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000786"},{"annotations":[93682],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1901098"},{"annotations":[102305,94069],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0016239"},{"annotations":[85585],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140501"},{"annotations":[100881,95460,95762,104618,86469,99495,111295,106723,104709,71640,113890,100438,96043,112677,99657],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061709"},{"annotations":[96044,77579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034517"}]},"cv_name":"biological_process","definition":"The autophagic process that proceeds via the formation of an autophagosome.","definition_xrefs":["PMID:24366339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":65,"genes_by_uniquename":{"SJAG_00029":null,"SJAG_00053":null,"SJAG_00059":null,"SJAG_00079":null,"SJAG_00114":null,"SJAG_00115":null,"SJAG_00355":null,"SJAG_00380":null,"SJAG_00645":null,"SJAG_00732":null,"SJAG_00763":null,"SJAG_00820":null,"SJAG_00850":null,"SJAG_01073":null,"SJAG_01135":null,"SJAG_01251":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01367":null,"SJAG_01382":null,"SJAG_01415":null,"SJAG_01467":null,"SJAG_01561":null,"SJAG_01716":null,"SJAG_01722":null,"SJAG_01783":null,"SJAG_01876":null,"SJAG_02100":null,"SJAG_02414":null,"SJAG_02433":null,"SJAG_02441":null,"SJAG_02525":null,"SJAG_02539":null,"SJAG_02640":null,"SJAG_02655":null,"SJAG_02663":null,"SJAG_02699":null,"SJAG_02723":null,"SJAG_02852":null,"SJAG_03100":null,"SJAG_03136":null,"SJAG_03170":null,"SJAG_03345":null,"SJAG_03435":null,"SJAG_03467":null,"SJAG_03718":null,"SJAG_03851":null,"SJAG_04021":null,"SJAG_04023":null,"SJAG_04219":null,"SJAG_04232":null,"SJAG_04294":null,"SJAG_04435":null,"SJAG_04496":null,"SJAG_04502":null,"SJAG_04552":null,"SJAG_04655":null,"SJAG_04837":null,"SJAG_04860":null,"SJAG_04963":null,"SJAG_04991":null,"SJAG_05017":null,"SJAG_05261":null,"SJAG_05289":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0044248","GO:0008150"],"is_obsolete":false,"name":"macroautophagy","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0034262"],"synonyms":[{"name":"autophagy","type":"broad"},{"name":"selective autophagy","type":"narrow"}],"termid":"GO:0016236","terms_by_termid":{"GO:0000045":null,"GO:0000423":null,"GO:0000425":null,"GO:0016236":null,"GO:0016239":null,"GO:0016240":null,"GO:0016242":null,"GO:0034517":null,"GO:0034727":null,"GO:0035973":null,"GO:0044804":null,"GO:0061709":null,"GO:0061723":null,"GO:0097352":null,"GO:0140501":null,"GO:1901098":null,"GO:2000786":null}}


id: GO:2000798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of amniotic stem cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mesenchymal stem cell differentiation","termid":"GO:2000740"},{"relation_name":"is_a","term_name":"regulation of amniotic stem cell differentiation","termid":"GO:2000797"},{"relation_name":"negatively_regulates","term_name":"amniotic stem cell differentiation","termid":"GO:0097086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amniotic stem cell differentiation","termid":"GO:2000798"}


id: MOD:00055
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-acetylglycine.","definition_xrefs":["PubMed:272676","PubMed:6754709","RESID:AA0046","PubMed:5545094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00649"}],"interesting_parent_ids":["MOD:00649"],"is_obsolete":false,"name":"N-acetylglycine","synonyms":[{"name":"(acetylamino)acetic acid","type":"exact"},{"name":"(acetylazanyl)ethanoic acid","type":"exact"},{"name":"2-(acetamido)ethanoic acid","type":"exact"},{"name":"2-(acetylamino)ethanoic acid","type":"exact"},{"name":"AcGly","type":"exact"},{"name":"MOD_RES N-acetylglycine","type":"exact"},{"name":"N-acetylated glycine","type":"exact"},{"name":"N-acetylglycine","type":"exact"},{"name":"aceturic acid","type":"exact"}],"termid":"MOD:00055"}


id: PBO:0040167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASMTL antisense RNA 1","termid":"PBO:0040167"}


id: GO:0001876
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lipoarabinomannan.","definition_xrefs":["PMID:10586073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GPI anchor binding","termid":"GO:0034235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0008289","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"lipoarabinomannan binding","synonyms":[{"name":"LAM binding","type":"exact"}],"termid":"GO:0001876"}


id: PATO:0000682
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000682 rate value (obsolete PATO:0000682)","termid":"PATO:0000682"}


id: PBO:0071589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 6","termid":"PBO:0071589"}


id: PBO:0065975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD54 like 2","termid":"PBO:0065975"}


id: FYPO:0004567
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype which the spindle is broken into fragments during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"},{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002399","FYPO:0000054","FYPO:0000120","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"fragmented spindle during meiosis II","synonyms":[{"name":"fragmented meiotic spindle during meiosis II","type":"exact"},{"name":"fragmented spindle during second meiotic nuclear division","type":"exact"},{"name":"fragmented spindle pole body during mitotic cell cycle","type":"related"},{"name":"spindle fragmentation during meiosis II","type":"exact"}],"termid":"FYPO:0004567"}


id: PATO:0001110
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001110 absolute density value (obsolete PATO:0001110)","termid":"PATO:0001110"}


id: PBO:0048227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GADD45G interacting protein 1","termid":"PBO:0048227"}


id: GO:0006546
data:
  {"annotated_genes":["SJAG_03641","SJAG_02901","SJAG_01271","SJAG_03861","SJAG_03290"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93926],"is_not":false,"summary":null,"term":"GO:0006546"},{"annotations":[84737,109096,92468,83501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycine, aminoethanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine metabolic process","termid":"GO:0006544"},{"relation_name":"is_a","term_name":"serine family amino acid catabolic process","termid":"GO:0009071"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01271":null,"SJAG_02901":null,"SJAG_03290":null,"SJAG_03641":null,"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281","GO:0044248"],"is_obsolete":false,"name":"glycine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycine breakdown","type":"exact"},{"name":"glycine catabolism","type":"exact"},{"name":"glycine degradation","type":"exact"}],"termid":"GO:0006546","terms_by_termid":{"GO:0006546":null,"GO:0019464":null}}


id: PBO:0076935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trefoil factor 3","termid":"PBO:0076935"}


id: GO:0008879
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-glucose 1-phosphate + dTTP = diphosphate + dTDP-glucose.","definition_xrefs":["EC:2.7.7.24","RHEA:15225"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016779","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"glucose-1-phosphate thymidylyltransferase activity","secondary_identifiers":["MetaCyc:DTDPGLUCOSEPP-RXN","KEGG_REACTION:R02328"],"synonyms":[{"name":"TDP-glucose pyrophosphorylase activity","type":"related"},{"name":"dTDP-glucose diphosphorylase activity","type":"related"},{"name":"dTDP-glucose pyrophosphorylase activity","type":"related"},{"name":"dTDP-glucose synthase activity","type":"related"},{"name":"dTTP:alpha-D-glucose-1-phosphate thymidylyltransferase activity","type":"related"},{"name":"glucose 1-phosphate thymidylyltransferase activity","type":"related"},{"name":"thymidine diphosphate glucose pyrophosphorylase activity","type":"related"},{"name":"thymidine diphosphoglucose pyrophosphorylase activity","type":"related"}],"termid":"GO:0008879"}


id: FYPO:0005811
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the biogenesis of nuclear membrane that normally forms part of mitosis is abnormal.","definition_xrefs":["PomBase:mah","PMID:26869222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitosis","termid":"FYPO:0000337"},{"relation_name":"is_a","term_name":"abnormal nuclear envelope organization","termid":"FYPO:0000815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000337","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"abnormal nuclear membrane biogenesis involved in mitosis","synonyms":[{"name":"abnormal membrane addition to the nuclear membrane during division","type":"exact"},{"name":"abnormal nuclear membrane biogenesis involved in mitosis during vegetative growth","type":"exact"},{"name":"abnormal nuclear membrane biogenesis involved in mitotic nuclear division","type":"exact"},{"name":"abnormal nuclear membrane biogenesis involved nuclear division during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005811"}


id: PBO:0063685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 5","termid":"PBO:0063685"}


id: GO:0042911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of acridine (10-azaanthracene), a heterocyclic ring compound found in crude coal-tar anthracene from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete acridine transmembrane transporter activity (obsolete GO:0042911)","synonyms":[{"name":"acridine transporter activity","type":"related"}],"termid":"GO:0042911"}


id: PBO:0064813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 2 pseudogene 4","termid":"PBO:0064813"}


id: PBO:0078440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 6-1","termid":"PBO:0078440"}


id: PBO:0079473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twist family bHLH transcription factor 1","termid":"PBO:0079473"}


id: PBO:0062897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacid CoA-transferase 2 pseudogene 1","termid":"PBO:0062897"}


id: GO:0120302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism changes its pigmentation (lightening in response to a brighter environment or darkening in response to a dimmer environment) in response to a change in light intensity.","definition_xrefs":["PMID:10493760","PMID:29239123","PMID:32898924","GOC:krc","GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light intensity","termid":"GO:0009642"},{"relation_name":"is_a","term_name":"regulation of pigmentation","termid":"GO:0120305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"background adaptation","termid":"GO:0120302"}


id: GO:0034680
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha10 subunit and one beta1 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"integrin alpha10-beta1 complex","synonyms":[{"name":"ITGA10-ITGB1 complex","type":"narrow"},{"name":"alpha10-beta1 integrin complex","type":"exact"}],"termid":"GO:0034680"}


id: PBO:0082144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Activator of Sar1p GTPase activity; paralog of Sec23 but does not associate with the COPII components; not an essential gene","termid":"PBO:0082144"}


id: GO:0071062
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphav-beta3 integrin complex bound to vitronectin.","definition_xrefs":["PMID:10835423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alphav-beta3 integrin-vitronectin complex","synonyms":[{"name":"ITGAV-ITGB3-VTN complex","type":"narrow"}],"termid":"GO:0071062"}


id: GO:0007337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete unilateral process (obsolete GO:0007337)","synonyms":[{"name":"unilateral process","type":"exact"}],"termid":"GO:0007337"}


id: PBO:0089259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc42 GTPase complex scaffold subunit Scd2","termid":"PBO:0089259"}


id: GO:0033453
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GCU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"GCU codon-amino acid adaptor activity","synonyms":[{"name":"GCT codon-amino acid adaptor activity","type":"exact"},{"name":"alanine tRNA","type":"related"}],"termid":"GO:0033453"}


id: GO:0035636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer of information between living organisms.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism signaling (obsolete GO:0035636)","synonyms":[{"name":"multi-organism signalling","type":"exact"},{"name":"pheromone signaling","type":"narrow"},{"name":"signaling between organisms","type":"exact"},{"name":"signaling with other organism","type":"exact"}],"termid":"GO:0035636"}


id: GO:1900532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Negative regulation of cell proliferation during cellular hyperosmotic response.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cell proliferation involved in cellular hyperosmotic response (obsolete GO:1900532)","synonyms":[{"name":"down regulation of cell proliferation of cellular HOG response","type":"exact"},{"name":"down regulation of cell proliferation of cellular hyperosmotic response","type":"exact"},{"name":"down regulation of cell proliferation of cellular hypertonic response","type":"exact"},{"name":"down regulation of cell proliferation of cellular response to hypertonicity","type":"exact"},{"name":"down-regulation of cell proliferation of cellular HOG response","type":"exact"},{"name":"down-regulation of cell proliferation of cellular hyperosmotic response","type":"exact"},{"name":"down-regulation of cell proliferation of cellular hypertonic response","type":"exact"},{"name":"down-regulation of cell proliferation of cellular response to hypertonicity","type":"exact"},{"name":"downregulation of cell proliferation of cellular HOG response","type":"exact"},{"name":"downregulation of cell proliferation of cellular hyperosmotic response","type":"exact"},{"name":"downregulation of cell proliferation of cellular hypertonic response","type":"exact"},{"name":"downregulation of cell proliferation of cellular response to hypertonicity","type":"exact"},{"name":"inhibition of cell proliferation of cellular HOG response","type":"narrow"},{"name":"inhibition of cell proliferation of cellular hyperosmotic response","type":"narrow"},{"name":"inhibition of cell proliferation of cellular hypertonic response","type":"narrow"},{"name":"inhibition of cell proliferation of cellular response to hypertonicity","type":"narrow"},{"name":"negative regulation of cell proliferation involved in cellular hyperosmotic response","type":"exact"},{"name":"negative regulation of cell proliferation of cellular HOG response","type":"exact"},{"name":"negative regulation of cell proliferation of cellular hyperosmotic response","type":"exact"},{"name":"negative regulation of cell proliferation of cellular hypertonic response","type":"exact"},{"name":"negative regulation of cell proliferation of cellular response to hypertonicity","type":"exact"}],"termid":"GO:1900532"}


id: PATO:0002180
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being free of curves, bends, or angles.","definition_xrefs":["merriam-webster:merriam-webster"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"straight","termid":"PATO:0002180"}


id: PBO:0065807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB3A, member RAS oncogene family","termid":"PBO:0065807"}


id: PBO:0053295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIMS1 antisense RNA 1","termid":"PBO:0053295"}


id: PBO:0082386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta 6 subunit of the 20S proteasome","termid":"PBO:0082386"}


id: PR:O42941
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cyp7 gene.","definition_xrefs":["UniProtKB:O42941","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase cyp7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16H5.05c","synonyms":[{"name":"PPIase cyp7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cyp7","type":"exact"},{"name":"complexed with cdc5 protein 27 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cyclophilin 7 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"rotamase cyp7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42941"}


id: MOD:01480
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue into an 5'-fluoro-L-tryptophan.","definition_xrefs":["PubMed:18688235","PubMed:8172898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monofluorinated L-tryptophan","termid":"MOD:01226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-fluoro-L-tryptophan","synonyms":[{"name":"5-fluorotryptophan","type":"exact"}],"termid":"MOD:01480"}


id: FYPO:0006290
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during S phase of the mitotic cell cycle and during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during cellular response to hydroxyurea","termid":"FYPO:0002099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein phosphorylation during mitotic S phase during cellular response to hydroxyurea","synonyms":[{"name":"normal protein phosphorylation during S phase during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"normal protein phosphorylation during cellular response to hydroxyurea during S phase of mitotic cell cycle","type":"exact"}],"termid":"FYPO:0006290"}


id: GO:0031918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that increases synaptic metaplasticity. Metaplasticity is a higher-order form of plasticity and is manifest as a change in the ability to induce subsequent synaptic plasticity that is the ability of synapses to change as circumstances require.","definition_xrefs":["GOC:mah","PMID:8658594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synaptic plasticity","termid":"GO:0031915"},{"relation_name":"is_a","term_name":"regulation of synaptic metaplasticity","termid":"GO:0031916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of synaptic metaplasticity","synonyms":[{"name":"activation of synaptic metaplasticity","type":"narrow"},{"name":"stimulation of synaptic metaplasticity","type":"narrow"},{"name":"up regulation of synaptic metaplasticity","type":"exact"},{"name":"up-regulation of synaptic metaplasticity","type":"exact"},{"name":"upregulation of synaptic metaplasticity","type":"exact"}],"termid":"GO:0031918"}


id: MOD:00421
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydrogen atom on a carbon with a carbohydrate-like group through a glycosidic bond.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00693"}],"interesting_parent_ids":["MOD:00693"],"is_obsolete":false,"name":"C-glycosylated residue","synonyms":[{"name":"CGlycoRes","type":"exact"}],"termid":"MOD:00421"}


id: GO:1990653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a monounsaturated fatty acid. A monounsaturated fatty acid has one double bond in the fatty acid chain with all of the remainder carbon atoms being single-bonded, as opposed to polyunsaturated fatty acids.","definition_xrefs":["PMID:16443825","GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete monounsaturated fatty acid biosynthetic process (obsolete GO:1990653)","termid":"GO:1990653"}


id: GO:0051108
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-carnitine + CoA + ATP = AMP + diphosphate + D-carnitinyl-CoA.","definition_xrefs":["MetaCyc:DCARNCOALIG-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"carnitine-CoA ligase activity","secondary_identifiers":["RHEA:30543"],"synonyms":[{"name":"carnitine synthetase activity","type":"exact"},{"name":"crotonobetaine/carnitine-CoA ligase activity","type":"broad"}],"termid":"GO:0051108"}


id: PBO:0051143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-21","termid":"PBO:0051143"}


id: PBO:0090338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC transmembrane transporter Abc1/Ybt1","termid":"PBO:0090338"}


id: GO:0035463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by an extracellular ligand binding to a transforming growth factor beta receptor on the surface of a target cell, which contributes to determination of organismal asymmetry with respect to the left and right halves.","definition_xrefs":["GOC:signaling","GOC:dgh"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor signaling pathway involved in determination of left/right asymmetry (obsolete GO:0035463)","synonyms":[{"name":"TGF-beta receptor signaling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"TGF-beta receptor signalling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"TGFbeta receptor signaling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"TGFbeta receptor signalling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"transforming growth factor beta receptor signalling pathway involved in determination of left/right asymmetry","type":"exact"}],"termid":"GO:0035463"}


id: GO:0090224
data:
  {"annotated_genes":["SJAG_04464","SJAG_00514","SJAG_00244","SJAG_02332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[107073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901673"},{"annotations":[111119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110162"},{"annotations":[85938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060236"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the assembly, arrangement of constituent parts, or disassembly of the microtubule spindle.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of microtubule cytoskeleton organization","termid":"GO:0070507"},{"relation_name":"regulates","term_name":"spindle organization","termid":"GO:0007051"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_02332":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0007049","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"regulation of spindle organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of spindle organisation","type":"exact"}],"termid":"GO:0090224","terms_by_termid":{"GO:0060236":null,"GO:0110161":null,"GO:0110162":null,"GO:1901673":null}}


id: PR:O74889
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sac3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAC3 family protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC576.05","synonyms":[{"name":"Spom972h-sac3","type":"exact"}],"termid":"PR:O74889"}


id: PBO:0028467
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-misoriented_cytoplasmic_microtubules","termid":"PBO:0028467"}


id: PBO:0080948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger BED-type containing 3","termid":"PBO:0080948"}


id: GO:0051235
data:
  {"annotated_genes":["SJAG_01116","SJAG_04867","SJAG_02980","SJAG_02763","SJAG_00053","SJAG_04221","SJAG_00368","SJAG_01180","SJAG_01906","SJAG_03170","SJAG_00321","SJAG_04041","SJAG_03162","SJAG_01537","SJAG_03609","SJAG_01738","SJAG_01001","SJAG_04049","SJAG_00030","SJAG_04059","SJAG_00661","SJAG_01017","SJAG_03850","SJAG_01993","SJAG_04982"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006880"},{"annotations":[110253,90709,114943,92773,84833,107046,108123],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140042"},{"annotations":[115559,108124,86096,87509,105781,110254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019915"},{"annotations":[100437,86468],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051685"},{"annotations":[102634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032065"},{"annotations":[90082,96235,106920,100702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097248"},{"annotations":[88178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006621"},{"annotations":[89435],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051209"},{"annotations":[104721],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0061454"},{"annotations":[110390,93786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042989"},{"annotations":[103077,111274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"}]},"cv_name":"biological_process","definition":"Any process in which a cell, substance or cellular entity, such as a protein complex or organelle, is maintained in a location and prevented from moving elsewhere.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization","termid":"GO:0051179"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00053":null,"SJAG_00321":null,"SJAG_00368":null,"SJAG_00661":null,"SJAG_01001":null,"SJAG_01017":null,"SJAG_01116":null,"SJAG_01180":null,"SJAG_01537":null,"SJAG_01738":null,"SJAG_01906":null,"SJAG_01993":null,"SJAG_02763":null,"SJAG_02980":null,"SJAG_03162":null,"SJAG_03170":null,"SJAG_03609":null,"SJAG_03850":null,"SJAG_04041":null,"SJAG_04049":null,"SJAG_04059":null,"SJAG_04221":null,"SJAG_04867":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of location","references_by_uniquename":{"GO_REF:0000107":null,"PMID:26774782":null},"synonyms":[{"name":"maintenance of localization","type":"exact"},{"name":"retention","type":"narrow"},{"name":"sequestering","type":"narrow"},{"name":"storage","type":"narrow"}],"termid":"GO:0051235","terms_by_termid":{"GO:0006621":null,"GO:0006880":null,"GO:0019915":null,"GO:0032065":null,"GO:0042989":null,"GO:0051209":null,"GO:0051685":null,"GO:0061454":null,"GO:0097248":null,"GO:0140042":null,"GO:1990854":null}}


id: PBO:0017603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structure-specific endonuclease catalytic subunit Slx1","termid":"PBO:0017603"}


id: PR:O74461
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug123 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 123 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.17","synonyms":[{"name":"Spom972h-mug123","type":"exact"}],"termid":"PR:O74461"}


id: PBO:0055987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRTM4 antisense RNA 1","termid":"PBO:0055987"}


id: PBO:0002375
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAPADILINO syndrome","termid":"PBO:0002375"}


id: PBO:0028662
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_replication_slippage_during_replication_fork_processing","termid":"PBO:0028662"}


id: PBO:0028180
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cysteine_synthase_activity","termid":"PBO:0028180"}


id: GO:0045592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ovarian cumulus cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"is_a","term_name":"regulation of antral ovarian follicle growth","termid":"GO:2000387"},{"relation_name":"regulates","term_name":"cumulus cell differentiation","termid":"GO:0001549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cumulus cell differentiation","synonyms":[{"name":"regulation of ovarian cumulus cell differentiation","type":"exact"}],"termid":"GO:0045592"}


id: GO:0033867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + Fas-activated serine/threonine protein = ADP + Fas-activated serine/threonine phosphoprotein.","definition_xrefs":["EC:2.7.11.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0004672","GO:0003674","GO:0140096","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"Fas-activated serine/threonine kinase activity","secondary_identifiers":["MetaCyc:2.7.11.8-RXN"],"synonyms":[{"name":"ATP:Fas-activated serine/threonine protein phosphotransferase activity","type":"related"},{"name":"FAST","type":"related"},{"name":"FASTK","type":"related"},{"name":"STK10","type":"related"}],"termid":"GO:0033867"}


id: GO:0071553
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a pyrimidine nucleotide and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:sl","PMID:10736418","PMID:15796906","PMID:12369950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"nucleotide receptor activity","termid":"GO:0016502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled pyrimidinergic nucleotide receptor activity","synonyms":[{"name":"G protein coupled pyrimidinergic nucleotide receptor activity","type":"exact"},{"name":"G-protein coupled pyrimidinergic nucleotide receptor activity","type":"exact"},{"name":"pyrimidinergic nucleotide receptor activity, G protein coupled","type":"exact"},{"name":"pyrimidinergic nucleotide receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0071553"}


id: PBO:0011457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Dsc E3 ligase complex subunit Dsc2","termid":"PBO:0011457"}


id: FYPO:0002153
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all cells in the population are viable but have a lower volume than normal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete viable small vegetative cell population (obsolete FYPO:0002153)","synonyms":[{"name":"wee population","type":"exact"}],"termid":"FYPO:0002153"}


id: SOFP:qseq_type
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qseq_type","termid":"SOFP:qseq_type"}


id: PBO:0017550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM binding protein homolog Mcb1","termid":"PBO:0017550"}


id: PBO:0087353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Splicing factor; component of the U4/U6-U5 snRNP complex","termid":"PBO:0087353"}


id: GO:0055075
data:
  {"annotated_genes":["SJAG_01353","SJAG_03401","SJAG_04760","SJAG_01541","SJAG_02883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101746],"is_not":false,"summary":null,"term":"GO:0055075"},{"annotations":[91498,85576,93062,92802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030007"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of potassium ions within an organism or cell.","definition_xrefs":["GOC:mah","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation homeostasis","termid":"GO:0055080"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01353":null,"SJAG_01541":null,"SJAG_02883":null,"SJAG_03401":null,"SJAG_04760":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"potassium ion homeostasis","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0055075","terms_by_termid":{"GO:0030007":null,"GO:0055075":null}}


id: PBO:0089959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH pyrophosphatase","termid":"PBO:0089959"}


id: GO:0097185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an azide stimulus.","definition_xrefs":["GOC:yaf","PMID:16846222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to azide","termid":"GO:0097184"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to azide","termid":"GO:0097185"}


id: GO:1900624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of monocyte aggregation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monocyte aggregation","termid":"GO:1900623"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte cell-cell adhesion","termid":"GO:1903038"},{"relation_name":"negatively_regulates","term_name":"monocyte aggregation","termid":"GO:0070487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of monocyte aggregation","synonyms":[{"name":"down regulation of monocyte aggregation","type":"exact"},{"name":"down regulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"down-regulation of monocyte aggregation","type":"exact"},{"name":"down-regulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"downregulation of monocyte aggregation","type":"exact"},{"name":"downregulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"inhibition of monocyte aggregation","type":"narrow"},{"name":"inhibition of mononuclear phagocyte aggregation","type":"exact"},{"name":"negative regulation of mononuclear phagocyte aggregation","type":"exact"}],"termid":"GO:1900624"}


id: GO:0055014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an atrial cardiac muscle cell over time, from its formation to the mature state. Cardiac muscle cells are striated muscle cells that are responsible for heart contraction. The atrium is the part of the heart that receives blood into the organ.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell development","termid":"GO:0055013"},{"relation_name":"part_of","term_name":"atrial cardiac muscle cell differentiation","termid":"GO:0055011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial cardiac muscle cell development","synonyms":[{"name":"atrial cardiomyocyte development","type":"exact"},{"name":"atrial heart muscle development","type":"exact"}],"termid":"GO:0055014"}


id: PBO:0047569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 20","termid":"PBO:0047569"}


id: PBO:0072207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 6","termid":"PBO:0072207"}


id: GO:0090642
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The dense, protein rich outermost layer of a microsporidian spore wall that lies above the endospore.","definition_xrefs":["PMID:19457051","PMID:25363531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"spore wall","termid":"GO:0031160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"microsporidian-type exospore","termid":"GO:0090642"}


id: PBO:0089954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0642 conserved fungal protein","termid":"PBO:0089954"}


id: PBO:0040819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BH3 interacting domain death agonist","termid":"PBO:0040819"}


id: PBO:0059806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 32","termid":"PBO:0059806"}


id: GO:0019328
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of gallate, the anion of gallic acid, in the absence of oxygen.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gallate catabolic process","termid":"GO:0019396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0044248"],"is_obsolete":false,"name":"anaerobic gallate catabolic process","secondary_identifiers":["MetaCyc:P3-PWY"],"synonyms":[{"name":"anaerobic gallate breakdown","type":"exact"},{"name":"anaerobic gallate catabolism","type":"exact"},{"name":"anaerobic gallate degradation","type":"exact"},{"name":"anaerobic gallic acid catabolic process","type":"exact"},{"name":"anaerobic gallic acid catabolism","type":"exact"},{"name":"gallate fermentation","type":"exact"}],"termid":"GO:0019328"}


id: PBO:0083878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ferredoxin of the mitochondrial matrix; required for formation of cellular iron-sulfur proteins; involved in heme A biosynthesis; human homolog FDX1L can complement yeast by allowing growth during down-regulation of yeast YAH1","termid":"PBO:0083878"}


id: PBO:0047661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 14","termid":"PBO:0047661"}


id: GO:0003033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about a lack of oxygen are received and are converted to a molecular signal by chemoreceptors in the aortic bodies.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hypoxic conditions in blood by chemoreceptor signaling","termid":"GO:0002007"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by aortic body chemoreceptor signaling","termid":"GO:0003028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of hypoxic conditions in blood by aortic body chemoreceptor signaling","synonyms":[{"name":"detection of hypoxic conditions in blood by aortic body chemoreceptor signalling","type":"exact"}],"termid":"GO:0003033"}


id: FYPO:0003015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell lyses, i.e. the plasma membrane ruptures and cytoplasm is lost, during a cellular response to salt stress. Note that in fission yeast cell lysis, the integrity of the cell wall is also compromised.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell lysis","termid":"FYPO:0000647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000004"],"is_obsolete":false,"name":"cell lysis during cellular response to salt stress","synonyms":[{"name":"cell lysis during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"cell lysis during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"cytolysis during cellular response to salt stress","type":"exact"},{"name":"inviable, lysed cell during cellular response to salt stress","type":"exact"},{"name":"lysed cell in response to salt stress","type":"exact"}],"termid":"FYPO:0003015"}


id: PBO:0045516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DTD1 antisense RNA 1","termid":"PBO:0045516"}


id: PBO:0044352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 39","termid":"PBO:0044352"}


id: SO:1001193
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is alternately spliced, and encodes more than one polypeptide, that have overlapping peptide sequences, but use different start and stop codons.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encodes_overlapping_peptides","termid":"SO:1001195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encodes_overlapping_polypeptides_different_start_and_stop","synonyms":[{"name":"encodes overlapping polypeptides different start and stop","type":"exact"}],"termid":"SO:1001193"}


id: GO:0072633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-30 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["PMID:30328794","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-30 production","secondary_identifiers":["GO:0072634"],"synonyms":[{"name":"IL-30 production","type":"exact"},{"name":"interleukin-30 complex production","type":"exact"},{"name":"interleukin-30 secretion","type":"narrow"}],"termid":"GO:0072633"}


id: PBO:0002482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component beta 2 (predicted)","termid":"PBO:0002482"}


id: GO:0035125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the embryonic anal fin are generated and organized. An anal fin is an unpaired medial fin on the ventral aspect near the caudal end of a fish, which provides lateral stability while swimming.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic medial fin morphogenesis","termid":"GO:0035122"},{"relation_name":"is_a","term_name":"anal fin morphogenesis","termid":"GO:0035144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic anal fin morphogenesis","termid":"GO:0035125"}


id: GO:0007282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any of the rounds of incomplete mitosis undergone by a cystoblast to form a cyst of interconnected cells.","definition_xrefs":["PMID:21452446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric cell division","termid":"GO:0008356"},{"relation_name":"part_of","term_name":"germ cell development","termid":"GO:0007281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cystoblast division","synonyms":[{"name":"cystoblast cell division","type":"exact"}],"termid":"GO:0007282"}


id: GO:0106061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of exit from meiosis.","definition_xrefs":["GOC:al","PMID:11493649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of exit from meiosis","termid":"GO:0106060"},{"relation_name":"is_a","term_name":"negative regulation of meiotic cell cycle phase transition","termid":"GO:1901994"},{"relation_name":"negatively_regulates","term_name":"exit from meiosis","termid":"GO:1990947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of exit from meiosis","termid":"GO:0106061"}


id: PBO:0028684
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_establishment_of_mitotic_spindle_pole_body_localization_to_nuclear_envelope","termid":"PBO:0028684"}


id: PBO:0076752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teratocarcinoma-derived growth factor 1 pseudogene 2","termid":"PBO:0076752"}


id: PBO:0073802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 8","termid":"PBO:0073802"}


id: PBO:0002767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PINT/PCI domain","termid":"PBO:0002767"}


id: PBO:0055669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA in non-homologous end joining pathway 1","termid":"PBO:0055669"}


id: GO:0098920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling from postsynapse to presynapse, across the synaptic cleft, mediated by a lipid ligand.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retrograde trans-synaptic signaling","termid":"GO:0098917"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by lipid","termid":"GO:0099541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"retrograde trans-synaptic signaling by lipid","termid":"GO:0098920"}


id: PBO:0047014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A17","termid":"PBO:0047014"}


id: GO:1900805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of brevianamide F. Brevianamide F is the biosynthetic precursor of a large family of biologically active prenylated tryptophan-proline 2,5-diketopiperazines that are produced by some fungi.","definition_xrefs":["GOC:di","PMID:16755625","PMID:17464044","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole alkaloid biosynthetic process","termid":"GO:0035835"},{"relation_name":"is_a","term_name":"indole-containing compound biosynthetic process","termid":"GO:0042435"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"brevianamide F biosynthetic process","secondary_identifiers":["GO:1900803"],"synonyms":[{"name":"C16H17N3O2 anabolism","type":"related"},{"name":"C16H17N3O2 biosynthesis","type":"related"},{"name":"C16H17N3O2 biosynthetic process","type":"related"},{"name":"C16H17N3O2 formation","type":"related"},{"name":"C16H17N3O2 synthesis","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride anabolism","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride biosynthesis","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride biosynthetic process","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride formation","type":"related"},{"name":"L-prolyl-L-tryptophan anhydride synthesis","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride anabolism","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride biosynthesis","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride biosynthetic process","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride formation","type":"related"},{"name":"L-tryptophyl-L-proline cyclic anhydride synthesis","type":"related"},{"name":"brevianamide F anabolism","type":"exact"},{"name":"brevianamide F biosynthesis","type":"exact"},{"name":"brevianamide F formation","type":"exact"},{"name":"brevianamide F metabolic process","type":"narrow"},{"name":"brevianamide F synthesis","type":"exact"},{"name":"cyclo-(Trp-Pro) anabolism","type":"related"},{"name":"cyclo-(Trp-Pro) biosynthesis","type":"related"},{"name":"cyclo-(Trp-Pro) biosynthetic process","type":"related"},{"name":"cyclo-(Trp-Pro) formation","type":"related"},{"name":"cyclo-(Trp-Pro) synthesis","type":"related"},{"name":"cyclo-L-Trp-L-Pro anabolism","type":"related"},{"name":"cyclo-L-Trp-L-Pro biosynthesis","type":"related"},{"name":"cyclo-L-Trp-L-Pro biosynthetic process","type":"related"},{"name":"cyclo-L-Trp-L-Pro formation","type":"related"},{"name":"cyclo-L-Trp-L-Pro synthesis","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline anabolism","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline biosynthesis","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline biosynthetic process","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline formation","type":"related"},{"name":"cyclo-L-tryptophanyl-L-proline synthesis","type":"related"},{"name":"tryptophan-proline diketopiperazine anabolism","type":"related"},{"name":"tryptophan-proline diketopiperazine biosynthesis","type":"related"},{"name":"tryptophan-proline diketopiperazine biosynthetic process","type":"related"},{"name":"tryptophan-proline diketopiperazine formation","type":"related"},{"name":"tryptophan-proline diketopiperazine synthesis","type":"related"}],"termid":"GO:1900805"}


id: FYPO:0000200
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[115394,115188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"}]},"cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which regulation of the mitotic metaphase to anaphase transition is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"abnormal mitotic metaphase/anaphase transition","termid":"FYPO:0006477"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01330":null},"genotype_count":1,"genotypes_by_uniquename":{"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal regulation of mitotic metaphase/anaphase transition","references_by_uniquename":{"PMID:21802294":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01330"],"single_locus_genotype_uniquenames":["mad2delta"],"synonyms":[{"name":"abnormal regulation of metaphase/anaphase transition during mitotic cell cycle","type":"exact"},{"name":"abnormal regulation of mitotic metaphase/anaphase transition during vegetative growth","type":"exact"}],"termid":"FYPO:0000200","terms_by_termid":{"FYECO:0000162":null,"FYPO:0004318":null}}


id: GO:0052494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism reduces the flow of fluid within its symbiont's vascular system, the vessels and tissue that carry or circulate fluids, such as blood, lymph or sap, through the body of an animal or plant. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete occlusion by host of symbiont vascular system (obsolete GO:0052494)","termid":"GO:0052494"}


id: PBO:0058563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6505","termid":"PBO:0058563"}


id: GO:0050668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving homocysteine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sulfur amino acid metabolic process","termid":"GO:0031337"},{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"regulation of homocysteine metabolic process","termid":"GO:0050666"},{"relation_name":"positively_regulates","term_name":"homocysteine metabolic process","termid":"GO:0050667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006520","GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of homocysteine metabolic process","synonyms":[{"name":"activation of homocysteine metabolic process","type":"narrow"},{"name":"positive regulation of Hcy metabolic process","type":"exact"},{"name":"positive regulation of Hcy metabolism","type":"exact"},{"name":"positive regulation of homocysteine metabolism","type":"exact"},{"name":"stimulation of homocysteine metabolic process","type":"narrow"},{"name":"up regulation of homocysteine metabolic process","type":"exact"},{"name":"up-regulation of homocysteine metabolic process","type":"exact"},{"name":"upregulation of homocysteine metabolic process","type":"exact"}],"termid":"GO:0050668"}


id: PBO:0027011
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_positive_regulation_of_protein_kinase_activity","termid":"PBO:0027011"}


id: GO:0052460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism modulates the frequency, rate or extent of the release of nutrients from a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation by host of symbiont process","termid":"GO:0051851"},{"relation_name":"part_of","term_name":"acquisition of nutrients from symbiont","termid":"GO:0051850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of nutrient release by symbiont","synonyms":[{"name":"modulation by host of nutrient release from symbiont","type":"exact"}],"termid":"GO:0052460"}


id: GO:0050982
data:
  {"annotated_genes":["SJAG_02258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104500],"is_not":false,"summary":null,"term":"GO:0050982"}]},"cv_name":"biological_process","definition":"The series of events by which a mechanical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:ai","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of external stimulus","termid":"GO:0009581"},{"relation_name":"is_a","term_name":"detection of abiotic stimulus","termid":"GO:0009582"},{"relation_name":"is_a","term_name":"response to mechanical stimulus","termid":"GO:0009612"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0050982","terms_by_termid":{"GO:0050982":null}}


id: GO:0043131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which nucleated precursor cells lose their nucleus during erythrocyte maturation.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enucleation","termid":"GO:0090601"},{"relation_name":"part_of","term_name":"enucleate erythrocyte maturation","termid":"GO:0043354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"erythrocyte enucleation","termid":"GO:0043131"}


id: PBO:0087990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-specific 2-thiouridylase; responsible for 2-thiolation of the wobble base of mitochondrial tRNAs; human homolog TRMU is implicated in myoclonus epilepsy associated with ragged red fibers (MERRF), and can complement yeast null mutant","termid":"PBO:0087990"}


id: PBO:0017439
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_translation_of","termid":"PBO:0017439"}


id: GO:0010395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving rhamnogalacturonan I (RGI), a branched pectin with a backbone of alternating alpha-(1->2)-linked rhamnose and alpha-(1->4)-linked D-galacturonic acid residues that carries neutral side-chains of predominantly beta-(1->4)-D-galactose and/or alpha-(1->5)-L-arabinose residues attached to the rhamnose residues of the RGI backbone.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide metabolic process","termid":"GO:0010383"},{"relation_name":"is_a","term_name":"cell wall pectin metabolic process","termid":"GO:0052546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"rhamnogalacturonan I metabolic process","synonyms":[{"name":"RGI metabolism","type":"related"},{"name":"rhamnogalacturonan I metabolism","type":"exact"}],"termid":"GO:0010395"}


id: PBO:0072726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ryanodine receptor 1","termid":"PBO:0072726"}


id: GO:0019228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An action potential that occurs in a neuron.","definition_xrefs":["GOC:tb","GOC:dph","GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"action potential","termid":"GO:0001508"},{"relation_name":"part_of","term_name":"transmission of nerve impulse","termid":"GO:0019226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuronal action potential","synonyms":[{"name":"generation of action potential","type":"related"}],"termid":"GO:0019228"}


id: FYPO:0003316
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the growing cell tip is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell tip during vegetative growth","termid":"FYPO:0001587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to growing cell tip","synonyms":[{"name":"normal protein localisation to growing cell tip","type":"exact"},{"name":"normal protein localization to growing cell end","type":"exact"},{"name":"normal protein localization to growing cell tip during mitotic cell cycle","type":"related"},{"name":"normal protein localization to growing cell tip during vegetative growth","type":"exact"}],"termid":"FYPO:0003316"}


id: PR:Q9P6S4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu25 gene.","definition_xrefs":["UniProtKB:Q9P6S4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27.03","synonyms":[{"name":"Spom972h-meu25","type":"exact"}],"termid":"PR:Q9P6S4"}


id: PBO:0040021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 9","termid":"PBO:0040021"}


id: PBO:0053782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1033","termid":"PBO:0053782"}


id: GO:0044348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation, which forms part of the cell wall.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide catabolic process","termid":"GO:0044347"},{"relation_name":"is_a","term_name":"plant-type cell wall cellulose metabolic process","termid":"GO:0052541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"plant-type cell wall cellulose catabolic process","synonyms":[{"name":"plant-type cell wall polysaccharide breakdown","type":"exact"}],"termid":"GO:0044348"}


id: MOD:01460
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a methyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"alpha-amino methylated residue","synonyms":[{"name":"N2MeRes","type":"exact"}],"termid":"MOD:01460"}


id: SO:0000942
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An integration/excision site of a phage chromosome at which a recombinase acts to insert the phage DNA at a cognate integration/excision site on a bacterial chromosome.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integration_excision_site","termid":"SO:0000946"},{"relation_name":"part_of","term_name":"phage_sequence","termid":"SO:0001042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attP_site","synonyms":[{"name":"attP site","type":"exact"}],"termid":"SO:0000942"}


id: PBO:0026914
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_duration_of_septation","termid":"PBO:0026914"}


id: PBO:0072437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 1","termid":"PBO:0072437"}


id: PBO:0011132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, adhesion molecule (predicted), DUF1773 family protein 6","termid":"PBO:0011132"}


id: PBO:0088840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaculoar proteinase B inhibitor Pbi2","termid":"PBO:0088840"}


id: GO:0032384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of cholesterol within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cholesterol transport","termid":"GO:0032375"},{"relation_name":"is_a","term_name":"negative regulation of intracellular sterol transport","termid":"GO:0032381"},{"relation_name":"is_a","term_name":"regulation of intracellular cholesterol transport","termid":"GO:0032383"},{"relation_name":"negatively_regulates","term_name":"intracellular cholesterol transport","termid":"GO:0032367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intracellular cholesterol transport","synonyms":[{"name":"down regulation of intracellular cholesterol transport","type":"exact"},{"name":"down-regulation of intracellular cholesterol transport","type":"exact"},{"name":"downregulation of intracellular cholesterol transport","type":"exact"},{"name":"inhibition of intracellular cholesterol transport","type":"narrow"}],"termid":"GO:0032384"}


id: PBO:0051033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF like family member 2","termid":"PBO:0051033"}


id: PBO:0062789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 3","termid":"PBO:0062789"}


id: PBO:0017094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"holo TFIIH complex subunit Tfb6","termid":"PBO:0017094"}


id: GO:0002139
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure involved in coupling stereocilia to one another in sensory hair cells There are four morphologically distinct types: tip links, horizontal top connectors, shaft connectors and ankle links. Tip links and horizontal top connectors are the only inter-stereocilia links associated with mature cochlea, whereas ankle links appear during development of the auditory hair bundle.","definition_xrefs":["PMID:16775142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"stereocilium bundle","termid":"GO:0032421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"stereocilia coupling link","termid":"GO:0002139"}


id: PBO:0068556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 7, pseudogene","termid":"PBO:0068556"}


id: PBO:0071673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 5","termid":"PBO:0071673"}


id: PBO:0057536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 652","termid":"PBO:0057536"}


id: GO:0052334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of the cytoskeleton of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by organism of cytoskeleton of other organism involved in symbiotic interaction (obsolete GO:0052334)","synonyms":[{"name":"modification by organism of cytoskeleton of other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052334"}


id: GO:1904610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 3,3',4,4',5-pentachlorobiphenyl stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:23196670"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organic cyclic compound","termid":"GO:0014070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 3,3',4,4',5-pentachlorobiphenyl","synonyms":[{"name":"response to PCB 126","type":"exact"}],"termid":"GO:1904610"}


id: FYECO:0000065
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Adenine was absent from the experiment.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000065 absence of adenine (obsolete FYECO:0000065)","termid":"FYECO:0000065"}


id: PBO:0030011
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-meiosis_and_sporulation_in_haploid","termid":"PBO:0030011"}


id: _global:regulates_o_has_input
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"This is the combination of the regulates relation with the has_input relation","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_o_has_input","secondary_identifiers":["GOREL:0001030"],"termid":"_global:regulates_o_has_input"}


id: PBO:0066742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 39","termid":"PBO:0066742"}


id: PBO:0084677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial aspartyl-tRNA synthetase; required for acylation of aspartyl-tRNA; yeast and bacterial aspartyl-, asparaginyl-, and lysyl-tRNA synthetases contain regions with high sequence similarity, suggesting a common ancestral gene","termid":"PBO:0084677"}


id: GO:0030650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving peptides with antibiotic activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide metabolic process","termid":"GO:0006518"},{"relation_name":"is_a","term_name":"antibiotic metabolic process","termid":"GO:0016999"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide antibiotic metabolic process","synonyms":[{"name":"peptide antibiotic metabolism","type":"exact"}],"termid":"GO:0030650"}


id: GO:1903352
data:
  {"annotated_genes":["SJAG_00543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103960],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990575"}]},"cv_name":"biological_process","definition":"The directed movement of L-ornithine across a membrane.","definition_xrefs":["PMID:8195186","GOC:krc","GOC:TermGenie","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ornithine transport","termid":"GO:0015822"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00543":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"L-ornithine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903352","terms_by_termid":{"GO:1990575":null}}


id: MOD:01447
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to N-(dihydroxymethyl)-L-methionine (not known as a natural, post-translational modification process).","definition_xrefs":["PubMed:9159480","RESID:AA0493","PubMed:12595263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(dihydroxymethyl)-L-methionine (Met)","synonyms":[{"name":"(2S)-2-[(dihydroxymethyl)amino]-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"N-(dihydroxymethyl)-L-methionine","type":"exact"},{"name":"N-formyl-L-methionine hydrate","type":"exact"},{"name":"N-orthoformylmethionine","type":"exact"}],"termid":"MOD:01447"}


id: PBO:0056447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 20","termid":"PBO:0056447"}


id: GO:0140534
data:
  {"annotated_genes":["SJAG_02804","SJAG_06425","SJAG_03280","SJAG_04881","SJAG_01389","SJAG_01069","SJAG_01127","SJAG_02914","SJAG_01940","SJAG_02776","SJAG_01006","SJAG_04384","SJAG_01305","SJAG_01240","SJAG_00790","SJAG_03333","SJAG_01929","SJAG_01178","SJAG_03345","SJAG_04127","SJAG_03292","SJAG_02913","SJAG_05278","SJAG_02208","SJAG_04294","SJAG_01051","SJAG_06383","SJAG_04435","SJAG_04090","SJAG_00277","SJAG_03672","SJAG_01709","SJAG_03955","SJAG_02867","SJAG_04370","SJAG_02875","SJAG_00924","SJAG_01166","SJAG_03841","SJAG_01134","SJAG_01349","SJAG_03115","SJAG_04451","SJAG_03801","SJAG_00360","SJAG_02354","SJAG_02437","SJAG_03535","SJAG_00959","SJAG_03311","SJAG_02588","SJAG_01223","SJAG_01750","SJAG_04956","SJAG_05348","SJAG_03710","SJAG_04119","SJAG_03737","SJAG_02065","SJAG_00846","SJAG_03930","SJAG_00295","SJAG_05274","SJAG_05414","SJAG_01558","SJAG_03261","SJAG_01999","SJAG_02330","SJAG_00175","SJAG_00064","SJAG_03416","SJAG_03066","SJAG_04821"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[107708,96077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070939"},{"annotations":[97248,99577,109905,100834,108312,110454,90884,87712],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072546"},{"annotations":[88379,89138],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034663"},{"annotations":[93098,106201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031211"},{"annotations":[86954,101889,112693,103573,103702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032865"},{"annotations":[110193,84013,107059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043529"},{"annotations":[114582,83450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017177"},{"annotations":[112209,99105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990529"},{"annotations":[85615,87274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120097"},{"annotations":[89131,113311,107661,89043,105977,104637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000506"},{"annotations":[83510,87446,88271,99777,110009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042765"},{"annotations":[113230,105614,103728,100865,85317,100033,101342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000836"},{"annotations":[85581],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990604"},{"annotations":[95704,91384,98630,96087,97408,112926,113391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008250"},{"annotations":[87294,104451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160005"},{"annotations":[102213,94111,105385,104362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005784"},{"annotations":[91799,105678,86638,106457],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0031207"},{"annotations":[99882,83717,108619,94479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005787"},{"annotations":[90336,105804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005785"},{"annotations":[94112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071261"},{"annotations":[99635,94405,94740],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043541"},{"annotations":[85321,100036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034098"}]},"cv_name":"cellular_component","definition":"A protein complex that is part of an endoplasmic reticulum.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"endoplasmic 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reticulum protein-containing complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140534","terms_by_termid":{"GO:0000506":null,"GO:0000836":null,"GO:0005784":null,"GO:0005785":null,"GO:0005787":null,"GO:0008250":null,"GO:0017177":null,"GO:0031207":null,"GO:0031211":null,"GO:0032865":null,"GO:0034098":null,"GO:0034663":null,"GO:0042765":null,"GO:0043529":null,"GO:0043541":null,"GO:0070939":null,"GO:0071261":null,"GO:0072546":null,"GO:0120097":null,"GO:0160005":null,"GO:1990529":null,"GO:1990604":null}}


id: PBO:0039279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 like 8, pseudogene","termid":"PBO:0039279"}


id: PBO:0041593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 5B","termid":"PBO:0041593"}


id: FYPO:0001304
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of myristoyl-CoA ligase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal myristoyl-CoA ligase activity","termid":"FYPO:0001303"},{"relation_name":"is_a","term_name":"decreased long-chain fatty acid-CoA ligase activity","termid":"FYPO:0001307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0005447","FYPO:0001985","FYPO:0000654","FYPO:0000707","FYPO:0000002"],"is_obsolete":false,"name":"decreased myristoyl-CoA ligase activity","synonyms":[{"name":"decreased myristoyl-CoA synthetase activity","type":"related"},{"name":"reduced myristoyl-CoA ligase activity","type":"exact"}],"termid":"FYPO:0001304"}


id: GO:0034561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,2-bis(4-hydroxyphenyl)-2-propanol = 4,4'-dihydroxy-alpha-methylstilbene + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,2-bis(4-hydroxyphenyl)-2-proponol dehydratase activity (obsolete GO:0034561)","termid":"GO:0034561"}


id: FYPO:0003809
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing latrunculin A.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0000003","FYPO:0002060","FYPO:0000139","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on latrunculin A","synonyms":[{"name":"normal cell population growth in presence of latrunculin A","type":"exact"},{"name":"normal cell population growth on latrunculin A","type":"exact"},{"name":"normal cellular response to latrunculin A","type":"related"},{"name":"normal growth on LAT-A","type":"exact"},{"name":"normal growth on LatA","type":"exact"},{"name":"normal vegetative cell population growth on latrunculin A","type":"exact"}],"termid":"FYPO:0003809"}


id: PBO:0045505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dentin sialophosphoprotein","termid":"PBO:0045505"}


id: PBO:0004304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein Klp9","termid":"PBO:0004304"}


id: GO:0080148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a response to water deprivation. Response to water deprivation is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.","definition_xrefs":["PMID:18835996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to water deprivation","termid":"GO:2000070"},{"relation_name":"negatively_regulates","term_name":"response to water deprivation","termid":"GO:0009414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to water deprivation","termid":"GO:0080148"}


id: PBO:0055553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2989","termid":"PBO:0055553"}


id: GO:0030690
data:
  {"annotated_genes":["SJAG_04346","SJAG_01275","SJAG_01494"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84002,88051,93941],"is_not":false,"summary":null,"term":"GO:0030690"}]},"cv_name":"cellular_component","definition":"A heterodimer associated with 90S and 66S preribosomes. Predominantly, but not exclusively, nucleolar; involved in ribosomal large subunit biogenesis.","definition_xrefs":["PMID:12446671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Noc complex","termid":"GO:0030689"},{"relation_name":"part_of","term_name":"90S preribosome","termid":"GO:0030686"},{"relation_name":"part_of","term_name":"preribosome, large subunit precursor","termid":"GO:0030687"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01275":null,"SJAG_01494":null,"SJAG_04346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0030684"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0030684","GO:0032991"],"is_obsolete":false,"name":"Noc1p-Noc2p complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030690","terms_by_termid":{"GO:0030690":null}}


id: PBO:0111826
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tf2-type transposon","termid":"PBO:0111826"}


id: GO:0072006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the nephron over time, from its formation to the mature structure. A nephron is the functional unit of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephron development","synonyms":[{"name":"nephrogenesis","type":"related"}],"termid":"GO:0072006"}


id: PBO:0004835
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.6","termid":"PBO:0004835"}


id: PBO:0029924
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ergosterol_absent_from_cell","termid":"PBO:0029924"}


id: GO:0042550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stabilization of the photosystem I protein complex, resulting from the phosphorylation of its structural protein subunits, in a cell actively involved in photosynthesis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photosynthesis, light reaction","termid":"GO:0042548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"photosystem I stabilization","termid":"GO:0042550"}


id: PBO:0072643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTEL1-TNFRSF6B readthrough (NMD candidate)","termid":"PBO:0072643"}


id: PBO:0053433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 378","termid":"PBO:0053433"}


id: SO:1001261
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of a mature mRNA transcript, modified before translation or during translation, usually by special cis-acting signals.","direct_ancestors":[{"relation_name":"has_quality","term_name":"recoded","termid":"SO:0000881"},{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recoded_mRNA","synonyms":[{"name":"recoded mRNA","type":"exact"}],"termid":"SO:1001261"}


id: PBO:0065240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 14","termid":"PBO:0065240"}


id: PBO:0054719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2128","termid":"PBO:0054719"}


id: PBO:0017611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex ERCC-3 subunit Ptr8","termid":"PBO:0017611"}


id: PBO:0090455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cohesin protection protein, shugoshin, Sgo1","termid":"PBO:0090455"}


id: PBO:0084940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multicopper oxidase; integral membrane protein with similarity to Fet3p; may have a role in iron transport","termid":"PBO:0084940"}


id: PBO:0065589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 5","termid":"PBO:0065589"}


id: PBO:0051155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-35 (non-functional)","termid":"PBO:0051155"}


id: GO:0044551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with resultant vasodilation of blood vessels, usually causing a reduction in blood pressure, in the bitten/stung organism.","definition_xrefs":["GOC:ecd","GOC:jl","PMID:21050868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"envenomation resulting in negative regulation of blood pressure in another organism","termid":"GO:0044500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"envenomation resulting in vasodilation in another organism","synonyms":[{"name":"envenomation resulting in modulation of vasodilation in other organism","type":"related"},{"name":"envenomation resulting in regulation of vasodilation in other organism","type":"related"},{"name":"envenomation resulting in vasodilation in other organism","type":"exact"}],"termid":"GO:0044551"}


id: GO:0071004
data:
  {"annotated_genes":["SJAG_00058","SJAG_03547","SJAG_04163","SJAG_03995","SJAG_00322","SJAG_00498","SJAG_02558","SJAG_00911","SJAG_04318","SJAG_00809","SJAG_02304","SJAG_01301","SJAG_00504","SJAG_00859","SJAG_01008","SJAG_02185","SJAG_04911","SJAG_03210","SJAG_02844","SJAG_00249","SJAG_00474","SJAG_05009","SJAG_02279","SJAG_05240","SJAG_01654","SJAG_01870","SJAG_03469","SJAG_00577","SJAG_03983","SJAG_00147","SJAG_04214","SJAG_00225"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84584,87611,89097,89425,90980,91239,91396,91664,92396,93896,97304,97798,98607,99267,101564,101918,102450,102810,102992,104818,105552,106107,106684,106702,106713,108428,108716,109344,109920,111316,112482,114783],"is_not":false,"summary":null,"term":"GO:0071004"}]},"cv_name":"cellular_component","definition":"A spliceosomal complex that is formed by association of the 5' splice site with the U1 snRNP, while the branch point sequence is recognized by the U2 snRNP. The prespliceosome includes many proteins in addition to those found in the U1 and U2 snRNPs. Commitment to a given pair of 5' and 3' splice sites occurs at the time of prespliceosome formation.","definition_xrefs":["GOC:krc","GOC:ab","PMID:17332742","GOC:mah","PMID:19239890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"U2-type spliceosomal complex","termid":"GO:0005684"},{"relation_name":"is_a","term_name":"prespliceosome","termid":"GO:0071010"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00147":null,"SJAG_00225":null,"SJAG_00249":null,"SJAG_00322":null,"SJAG_00474":null,"SJAG_00498":null,"SJAG_00504":null,"SJAG_00577":null,"SJAG_00809":null,"SJAG_00859":null,"SJAG_00911":null,"SJAG_01008":null,"SJAG_01301":null,"SJAG_01654":null,"SJAG_01870":null,"SJAG_02185":null,"SJAG_02279":null,"SJAG_02304":null,"SJAG_02558":null,"SJAG_02844":null,"SJAG_03210":null,"SJAG_03469":null,"SJAG_03547":null,"SJAG_03983":null,"SJAG_03995":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04318":null,"SJAG_04911":null,"SJAG_05009":null,"SJAG_05240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"U2-type prespliceosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"GT-AG prespliceosome","type":"narrow"},{"name":"major prespliceosome","type":"exact"},{"name":"mammalian U2-type spliceosomal complex A","type":"narrow"},{"name":"yeast U2-type spliceosomal complex B","type":"narrow"}],"termid":"GO:0071004","terms_by_termid":{"GO:0071004":null}}


