# terms

id: GO:0001883
data:
  {"annotated_genes":["SJAG_04410"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111760],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905108"}]},"cv_name":"molecular_function","definition":"Binding to a purine nucleoside, a compound consisting of a purine base linked either to ribose or deoxyribose.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside binding","termid":"GO:0001882"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"purine nucleoside binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0001883","terms_by_termid":{"GO:1905108":null}}


id: PBO:0073567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shiftless antiviral inhibitor of ribosomal frameshifting","termid":"PBO:0073567"}


id: GO:0007450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the dorsal/ventral axis of the imaginal disc. Imaginal disks are masses of hypodermic cells, carried by the larvae of some insects after leaving the egg, from which masses the wings and legs of the adult are subsequently formed.","definition_xrefs":["ISBN:0879694238","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc pattern formation","termid":"GO:0007447"},{"relation_name":"is_a","term_name":"dorsal/ventral pattern formation","termid":"GO:0009953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal/ventral pattern formation, imaginal disc","synonyms":[{"name":"dorsal-ventral pattern formation, imaginal disc","type":"exact"},{"name":"dorsoventral pattern formation, imaginal disc","type":"exact"}],"termid":"GO:0007450"}


id: PBO:0057440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 557","termid":"PBO:0057440"}


id: PBO:0001493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citrate synthase Cit1","termid":"PBO:0001493"}


id: GO:0019706
data:
  {"annotated_genes":["SJAG_01299","SJAG_04451","SJAG_01112","SJAG_00895"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91960,99176,104335,106204],"is_not":false,"summary":null,"term":"GO:0019706"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a palmitoyl (systematic name, hexadecanoyl) group to a sulfur atom on the cysteine of a protein molecule, in the reaction hexadecanoyl-CoA + L-cysteinyl-[protein] = CoA + S-hexadecanoyl-L-cysteinyl-[protein].","definition_xrefs":["RHEA:36683","GOC:pr","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"palmitoyltransferase activity","termid":"GO:0016409"},{"relation_name":"is_a","term_name":"protein-cysteine S-acyltransferase activity","termid":"GO:0019707"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00895":null,"SJAG_01112":null,"SJAG_01299":null,"SJAG_04451":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"protein-cysteine S-palmitoyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9647982","Reactome:R-HSA-9021072","Reactome:R-HSA-9829047","EC:2.3.1.225","Reactome:R-HSA-5682084","Reactome:R-HSA-9694341","Reactome:R-HSA-9830875"],"synonyms":[{"name":"protein-cysteine S-palmitoleyltransferase activity","type":"related"}],"termid":"GO:0019706","terms_by_termid":{"GO:0019706":null}}


id: GO:0018922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving prodione, a colorless, odorless crystal. It is used as a dicarboximide contact fungicide to control a wide variety of crop diseases by inhibiting the germination of spores and the growth of the fungal mat (mycelium).","definition_xrefs":["UM-BBD_pathwayID:ipd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"imidazole-containing compound metabolic process","termid":"GO:0052803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"iprodione metabolic process","synonyms":[{"name":"iprodione metabolism","type":"exact"}],"termid":"GO:0018922"}


id: GO:0015985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that provides energy for the synthesis of ATP or GTP.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transport","termid":"GO:1902600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"energy coupled proton transport, down electrochemical gradient","termid":"GO:0015985"}


id: GO:1904300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcytosis.","definition_xrefs":["PMID:9664076","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of transcytosis","termid":"GO:1904298"},{"relation_name":"positively_regulates","term_name":"transcytosis","termid":"GO:0045056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"positive regulation of transcytosis","synonyms":[{"name":"activation of transcytosis","type":"narrow"},{"name":"up regulation of transcytosis","type":"exact"},{"name":"up-regulation of transcytosis","type":"exact"},{"name":"upregulation of transcytosis","type":"exact"}],"termid":"GO:1904300"}


id: FYPO:0000096
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cadmium. Cells stop growing (and may die) at a concentration of cadmium ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to cadmium","synonyms":[{"name":"hypersensitive to cadmium","type":"exact"},{"name":"sensitive to cadmium during mitotic cell cycle","type":"related"},{"name":"sensitive to cadmium during vegetative growth","type":"exact"},{"name":"sensitive to cadmium ions","type":"exact"}],"termid":"FYPO:0000096"}


id: GO:0019670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glutamate, yielding energy in the form of ATP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate catabolic process","termid":"GO:0006538"},{"relation_name":"is_a","term_name":"anaerobic amino acid catabolic process","termid":"GO:0019665"},{"relation_name":"is_a","term_name":"nitrogenous compound fermentation","termid":"GO:0019666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0044248"}],"interesting_parent_ids":["GO:0006091","GO:0044248","GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"anaerobic glutamate catabolic process","synonyms":[{"name":"glutamate fermentation","type":"exact"}],"termid":"GO:0019670"}


id: PBO:0054990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2404","termid":"PBO:0054990"}


id: PBO:0090488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin family membrane adaptor Mug170","termid":"PBO:0090488"}


id: GO:0004896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a cytokine and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"immune receptor activity","termid":"GO:0140375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"cytokine receptor activity","secondary_identifiers":["GO:0004907"],"synonyms":[{"name":"IL receptor","type":"narrow"},{"name":"hematopoietin/interferon-class (D200-domain) cytokine receptor activity","type":"related"},{"name":"interleukin receptor activity","type":"narrow"}],"termid":"GO:0004896"}


id: PBO:0078114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 3","termid":"PBO:0078114"}


id: PBO:0034688
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_vegetative_cell_with_long_curved_cytoplasmic_microtubules","termid":"PBO:0034688"}


id: PBO:0043374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria homolog pseudogene 4","termid":"PBO:0043374"}


id: PBO:0077051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THRB antisense RNA 2","termid":"PBO:0077051"}


id: PBO:0064557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-mannose kinase","termid":"PBO:0064557"}


id: PBO:0069045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 290, pseudogene","termid":"PBO:0069045"}


id: PBO:0041557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 19 open reading frame 47","termid":"PBO:0041557"}


id: PBO:0030601
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_isoleucine_import","termid":"PBO:0030601"}


id: SO:0000429
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The U3 segment of the three-prime long terminal repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"U3_LTR_region","termid":"SO:0000424"},{"relation_name":"is_a","term_name":"five_prime_LTR_component","termid":"SO:0000850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3_five_prime_LTR_region","synonyms":[{"name":"U3 5' long term repeat region","type":"exact"},{"name":"U3 five prime LTR region","type":"exact"}],"termid":"SO:0000429"}


id: PBO:0063080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAPPA antisense RNA 2","termid":"PBO:0063080"}


id: GO:0102056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3'-phosphonato-5'-adenylyl sulfate + an 11-hydroxyjasmonate = adenosine 3',5'-bismonophosphate + H+ + an 11-hydroxyjasmonate sulfate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 11-hydroxyjasmonate sulfotransferase activity (obsolete GO:0102056)","termid":"GO:0102056"}


id: GO:2000263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of blood coagulation, extrinsic pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood coagulation","termid":"GO:0030193"},{"relation_name":"is_a","term_name":"regulation of protein activation cascade","termid":"GO:2000257"},{"relation_name":"regulates","term_name":"blood coagulation, extrinsic pathway","termid":"GO:0007598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"regulation of blood coagulation, extrinsic pathway","termid":"GO:2000263"}


id: GO:1902068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sphingolipid signaling.","definition_xrefs":["PMID:20870412","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"sphingolipid mediated signaling pathway","termid":"GO:0090520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of sphingolipid mediated signaling pathway","synonyms":[{"name":"regulation of sphingolipid signaling pathway","type":"related"}],"termid":"GO:1902068"}


id: PBO:0030828
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_phosphoribosylformylglycinamidine_cyclo-ligase_activity","termid":"PBO:0030828"}


id: PBO:0029137
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_cordycepin","termid":"PBO:0029137"}


id: GO:0036165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of colonies in filamentous chains of cells as a result of an increase in temperature.","definition_xrefs":["GOC:di","PMID:22365851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filamentous growth of a population of unicellular organisms in response to heat","termid":"GO:0036168"},{"relation_name":"is_a","term_name":"invasive filamentous growth","termid":"GO:0036267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"invasive growth in response to heat","synonyms":[{"name":"invasive growth in response to elevated temperature","type":"exact"},{"name":"invasive growth in response to high temperature","type":"exact"},{"name":"invasive growth in response to temperature stimulus","type":"broad"}],"termid":"GO:0036165"}


id: GO:0070166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which calcium salts, mainly carbonated hydroxyapatite, are deposited in tooth enamel.","definition_xrefs":["GOC:BHF","GOC:mah","PMID:10206335","PMID:16931858","PMID:21196346","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth mineralization","termid":"GO:0034505"},{"relation_name":"part_of","term_name":"amelogenesis","termid":"GO:0097186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enamel mineralization","synonyms":[{"name":"enamel formation","type":"related"}],"termid":"GO:0070166"}


id: PATO:0001137
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001137 ig g concentration (obsolete PATO:0001137)","termid":"PATO:0001137"}


id: PBO:0082147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acyl-CoA:sterol acyltransferase; endoplasmic reticulum enzyme that contributes the major sterol esterification activity in the presence of oxygen; ARE2 has a paralog, ARE1, that arose from the whole genome duplication","termid":"PBO:0082147"}


id: GO:0160019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of platelet rolling.","definition_xrefs":["PMID:15738422","GOC:sl","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of heterotypic cell-cell adhesion","termid":"GO:0034115"},{"relation_name":"is_a","term_name":"regulation of platelet rolling","termid":"GO:0160017"},{"relation_name":"negatively_regulates","term_name":"platelet rolling","termid":"GO:0160015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of platelet rolling","termid":"GO:0160019"}


id: PBO:0056913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane integral NOTCH2 associated receptor 2","termid":"PBO:0056913"}


id: PBO:0068118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 425","termid":"PBO:0068118"}


id: PBO:0015697
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae SKN7","termid":"PBO:0015697"}


id: PBO:0041208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BZW1 antisense RNA 1","termid":"PBO:0041208"}


id: PBO:0004768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Vti1 (predicted)","termid":"PBO:0004768"}


id: PBO:0033763
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_chromosome_arms","termid":"PBO:0033763"}


id: GO:0047360
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-undecaprenyl phosphate + UDP-D-galactose = alpha-D-galactosyl-diphosphoundecaprenol + UMP.","definition_xrefs":["EC:2.7.8.6","RHEA:11652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016780","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"undecaprenyl-phosphate galactose phosphotransferase activity","secondary_identifiers":["KEGG_REACTION:R01535","MetaCyc:2.7.8.6-RXN"],"synonyms":[{"name":"UDP-galactose:undecaprenyl-phosphate galactose phosphotransferase activity","type":"related"},{"name":"poly(isoprenol)-phosphate galactose phosphotransferase activity","type":"related"},{"name":"poly(isoprenol)-phosphate galactosephosphotransferase activity","type":"related"},{"name":"poly(isoprenyl)phosphate galactosephosphatetransferase activity","type":"related"},{"name":"undecaprenyl phosphate galactosyl-1-phosphate transferase activity","type":"related"}],"termid":"GO:0047360"}


id: PBO:0017895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyldiphosphate:farnesyldiphosphatefarnesyltransferase (squalene synthase) Erg9","termid":"PBO:0017895"}


id: PR:O94286
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23418:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.01","secondary_identifiers":["UniProtKB:O94286"],"synonyms":[{"name":"ARD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Fe-ARD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC887.01","type":"related"},{"name":"Spom972h-ADI1","type":"exact"},{"name":"acireductone dioxygenase (Fe(2+)-requiring) (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94286"}


id: PBO:0113797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase/ dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase Alg9","termid":"PBO:0113797"}


id: PBO:0039346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-methylacyl-CoA racemase","termid":"PBO:0039346"}


id: GO:0102941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,5-dihydroxyanisole + S-adenosyl-L-methionine = H+ + 3,5-dimethoxyphenol + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.-","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3,5-dihydroxyanisole O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9021"],"termid":"GO:0102941"}


id: GO:0015350
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of methotrexate, 4-amino-10-methylformic acid from one side of a membrane to the other. Methotrexate is a folic acid analogue and a potent competitive inhibitor of dihydrofolate reductase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transmembrane transporter activity","termid":"GO:0005310"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"},{"relation_name":"is_a","term_name":"xenobiotic transmembrane transporter activity","termid":"GO:0042910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"methotrexate transmembrane transporter activity","synonyms":[{"name":"methotrexate transporter activity","type":"related"}],"termid":"GO:0015350"}


id: PBO:0091258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYR family","termid":"PBO:0091258"}


id: GO:1903657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of type IV pilus biogenesis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:25049409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell projection organization","termid":"GO:0031345"},{"relation_name":"is_a","term_name":"regulation of type IV pilus biogenesis","termid":"GO:1903656"},{"relation_name":"negatively_regulates","term_name":"type IV pilus assembly","termid":"GO:0043683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of type IV pilus biogenesis","synonyms":[{"name":"down regulation of TFP biogenesis","type":"exact"},{"name":"down regulation of type 4 pilus biogenesis","type":"exact"},{"name":"down regulation of type IV fimbria assembly","type":"exact"},{"name":"down regulation of type IV fimbria biogenesis","type":"exact"},{"name":"down regulation of type IV fimbriae assembly","type":"exact"},{"name":"down regulation of type IV fimbriae biogenesis","type":"exact"},{"name":"down regulation of type IV fimbrial assembly","type":"exact"},{"name":"down regulation of type IV fimbrial biogenesis","type":"exact"},{"name":"down regulation of type IV fimbrium assembly","type":"exact"},{"name":"down regulation of type IV fimbrium biogenesis","type":"exact"},{"name":"down regulation of type IV pilus biogenesis","type":"exact"},{"name":"down regulation of type IV pilus biosynthesis","type":"exact"},{"name":"down-regulation of TFP biogenesis","type":"exact"},{"name":"down-regulation of type 4 pilus biogenesis","type":"exact"},{"name":"down-regulation of type IV fimbria assembly","type":"exact"},{"name":"down-regulation of type IV fimbria biogenesis","type":"exact"},{"name":"down-regulation of type IV fimbriae assembly","type":"exact"},{"name":"down-regulation of type IV fimbriae biogenesis","type":"exact"},{"name":"down-regulation of type IV fimbrial assembly","type":"exact"},{"name":"down-regulation of type IV fimbrial biogenesis","type":"exact"},{"name":"down-regulation of type IV fimbrium assembly","type":"exact"},{"name":"down-regulation of type IV fimbrium biogenesis","type":"exact"},{"name":"down-regulation of type IV pilus biogenesis","type":"exact"},{"name":"down-regulation of type IV pilus biosynthesis","type":"exact"},{"name":"downregulation of TFP biogenesis","type":"exact"},{"name":"downregulation of type 4 pilus biogenesis","type":"exact"},{"name":"downregulation of type IV fimbria assembly","type":"exact"},{"name":"downregulation of type IV fimbria biogenesis","type":"exact"},{"name":"downregulation of type IV fimbriae assembly","type":"exact"},{"name":"downregulation of type IV fimbriae biogenesis","type":"exact"},{"name":"downregulation of type IV fimbrial assembly","type":"exact"},{"name":"downregulation of type IV fimbrial biogenesis","type":"exact"},{"name":"downregulation of type IV fimbrium assembly","type":"exact"},{"name":"downregulation of type IV fimbrium biogenesis","type":"exact"},{"name":"downregulation of type IV pilus biogenesis","type":"exact"},{"name":"downregulation of type IV pilus biosynthesis","type":"exact"},{"name":"inhibition of TFP biogenesis","type":"narrow"},{"name":"inhibition of type 4 pilus biogenesis","type":"narrow"},{"name":"inhibition of type IV fimbria assembly","type":"narrow"},{"name":"inhibition of type IV fimbria biogenesis","type":"narrow"},{"name":"inhibition of type IV fimbriae assembly","type":"narrow"},{"name":"inhibition of type IV fimbriae biogenesis","type":"narrow"},{"name":"inhibition of type IV fimbrial assembly","type":"narrow"},{"name":"inhibition of type IV fimbrial biogenesis","type":"narrow"},{"name":"inhibition of type IV fimbrium assembly","type":"narrow"},{"name":"inhibition of type IV fimbrium biogenesis","type":"narrow"},{"name":"inhibition of type IV pilus biogenesis","type":"narrow"},{"name":"inhibition of type IV pilus biosynthesis","type":"narrow"},{"name":"negative regulation of TFP biogenesis","type":"exact"},{"name":"negative regulation of type 4 pilus biogenesis","type":"exact"},{"name":"negative regulation of type IV fimbria assembly","type":"exact"},{"name":"negative regulation of type IV fimbria biogenesis","type":"exact"},{"name":"negative regulation of type IV fimbriae assembly","type":"exact"},{"name":"negative regulation of type IV fimbriae biogenesis","type":"exact"},{"name":"negative regulation of type IV fimbrial assembly","type":"exact"},{"name":"negative regulation of type IV fimbrial biogenesis","type":"exact"},{"name":"negative regulation of type IV fimbrium assembly","type":"exact"},{"name":"negative regulation of type IV fimbrium biogenesis","type":"exact"},{"name":"negative regulation of type IV pilus biosynthesis","type":"exact"}],"termid":"GO:1903657"}


id: PBO:0064632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPARG coactivator 1 alpha","termid":"PBO:0064632"}


id: GO:0007120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of defining the next site of bud emergence adjacent to the last site of bud emergence on a budding cell.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular bud site selection","termid":"GO:0000282"},{"relation_name":"is_a","term_name":"cell budding","termid":"GO:0007114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0000281","GO:0007163"],"is_obsolete":false,"name":"axial cellular bud site selection","synonyms":[{"name":"axial bud site selection","type":"exact"},{"name":"axial budding","type":"broad"}],"termid":"GO:0007120"}


id: PBO:0088032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin activating enzyme (E1); involved in ubiquitin-mediated protein degradation and essential for viability; protein abundance increases in response to DNA replication stress","termid":"PBO:0088032"}


id: PBO:0081914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 883","termid":"PBO:0081914"}


id: GO:0075509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any endocytosis that is involved in the uptake of a virus into a host cell.","definition_xrefs":["GOC:bf","VZ:977","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytosis","termid":"GO:0006897"},{"relation_name":"is_a","term_name":"transport of virus","termid":"GO:0046794"},{"relation_name":"part_of","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"endocytosis involved in viral entry into host cell","synonyms":[{"name":"viral entry into host cell via endocytosis","type":"related"},{"name":"viral penetration via endocytosis followed by endosome disruption","type":"exact"},{"name":"virus endocytosis by host","type":"exact"}],"termid":"GO:0075509"}


id: PR:O14261
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taz1-interacting factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.04","synonyms":[{"name":"Spom972h-atg11","type":"exact"},{"name":"autophagy-related protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"cytoplasm to vacuole targeting protein 9 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"protein taf1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14261"}


id: GO:1900952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of 18-methylnonadec-1-ene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of olefin biosynthetic process","termid":"GO:1900913"},{"relation_name":"is_a","term_name":"regulation of 18-methylnonadec-1-ene biosynthetic process","termid":"GO:1900950"},{"relation_name":"is_a","term_name":"positive regulation of 18-methylnonadec-1-ene metabolic process","termid":"GO:1900955"},{"relation_name":"positively_regulates","term_name":"18-methylnonadec-1-ene biosynthetic process","termid":"GO:1900881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of 18-methylnonadec-1-ene biosynthetic process","synonyms":[{"name":"activation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"activation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"activation of 18-methylnonadec-1-ene biosynthetic process","type":"narrow"},{"name":"activation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"activation of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"positive regulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"positive regulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"positive regulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"positive regulation of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"up regulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"up regulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"up regulation of 18-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"up regulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"up regulation of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"up-regulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"up-regulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"up-regulation of 18-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"up-regulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"up-regulation of 18-methylnonadec-1-ene synthesis","type":"exact"},{"name":"upregulation of 18-methylnonadec-1-ene anabolism","type":"exact"},{"name":"upregulation of 18-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"upregulation of 18-methylnonadec-1-ene biosynthetic process","type":"exact"},{"name":"upregulation of 18-methylnonadec-1-ene formation","type":"exact"},{"name":"upregulation of 18-methylnonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900952"}


id: GO:0047886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesol + NADP+ = 2-trans,6-trans-farnesal + H+ + NADPH.","definition_xrefs":["RHEA:14697","EC:1.1.1.216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"farnesol dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03264","MetaCyc:FARNESOL-DEHYDROGENASE-RXN"],"synonyms":[{"name":"2-trans,6-trans-farnesol:NADP+ 1-oxidoreductase activity","type":"related"},{"name":"NADP-farnesol dehydrogenase activity","type":"related"},{"name":"farnesol (nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"related"}],"termid":"GO:0047886"}


id: PBO:0082421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bifunctional triacylglycerol lipase and LPA acyltransferase; lipid particle-localized triacylglycerol (TAG) lipase involved in triacylglycerol mobilization; catalyzes acylation of lysophosphatidic acid (LPA); potential Cdc28p substrate; TGL5 has a paralog, TGL4, that arose from the whole genome duplication","termid":"PBO:0082421"}


id: PBO:0070693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L8 pseudogene 2","termid":"PBO:0070693"}


id: GO:0019151
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactose + NAD+ = D-galactono-1,4-lactone + NADH + H+.","definition_xrefs":["EC:1.1.1.48"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"galactose 1-dehydrogenase activity","secondary_identifiers":["RHEA:21296","MetaCyc:GALACTODEHYDROG-RXN"],"synonyms":[{"name":"D-galactose 1-dehydrogenase activity","type":"exact"},{"name":"D-galactose dehydrogenase activity","type":"related"},{"name":"D-galactose:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"NAD-dependent D-galactose dehydrogenase activity","type":"related"},{"name":"beta-galactose dehydrogenase activity","type":"related"}],"termid":"GO:0019151"}


id: FYPO:0002939
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which an RNA catabolic process that degrades mRNA encoded in the nucleus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0000956","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"},{"relation_name":"is_a","term_name":"normal RNA metabolic process","termid":"FYPO:0004850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal nuclear mRNA catabolic process","synonyms":[{"name":"normal nuclear mRNA breakdown","type":"exact"},{"name":"normal nuclear mRNA catabolic process during mitotic cell cycle","type":"related"},{"name":"normal nuclear mRNA catabolic process during vegetative growth","type":"exact"},{"name":"normal nuclear mRNA catabolism","type":"exact"},{"name":"normal nuclear mRNA degradation","type":"exact"},{"name":"normal nuclear-transcribed mRNA catabolic process","type":"exact"}],"termid":"FYPO:0002939"}


id: PBO:0005253
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally induced by stress","termid":"PBO:0005253"}


id: PBO:0043397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"c-Maf inducing protein","termid":"PBO:0043397"}


id: PBO:0112983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Accessory component of the Ccr4-NOT complex; GFP-fusion protein expression is induced in response to the DNA-damaging agent MMS","termid":"PBO:0112983"}


id: FYPO:0000193
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype observed in the vegetative growth phase of the life cycle in which a cellular response to osmotic stress is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to stress during vegetative growth","termid":"FYPO:0001341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000298"],"is_obsolete":false,"name":"abnormal cellular response to osmotic stress","synonyms":[{"name":"abnormal cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"abnormal cellular response to osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0000193"}


id: PBO:0057621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1185-1","termid":"PBO:0057621"}


id: GO:0048384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by a retinoic acid binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"is_a","term_name":"nuclear receptor-mediated signaling pathway","termid":"GO:0141193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"retinoic acid receptor signaling pathway","synonyms":[{"name":"RAR signaling pathway","type":"exact"},{"name":"nuclear receptor-mediated retinoic acid signaling pathway","type":"exact"},{"name":"retinoic acid receptor signalling pathway","type":"exact"}],"termid":"GO:0048384"}


id: GO:0060318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Erythrocyte differentiation which occurs as part of the process of definitive hemopoiesis.","definition_xrefs":["GOC:add","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erythrocyte differentiation","termid":"GO:0030218"},{"relation_name":"part_of","term_name":"definitive hemopoiesis","termid":"GO:0060216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"definitive erythrocyte differentiation","synonyms":[{"name":"definitive RBC differentiation","type":"exact"},{"name":"definitive erythropoiesis","type":"exact"},{"name":"definitive red blood cell differentiation","type":"exact"}],"termid":"GO:0060318"}


id: PBO:0045282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 33","termid":"PBO:0045282"}


id: PBO:0040829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"baculoviral IAP repeat containing 5","termid":"PBO:0040829"}


id: GO:0021875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands that contributes to the self renewal of neuroblasts in the forebrain.","definition_xrefs":["GOC:cls","GOC:dph","GO_REF:0000021","GOC:dgh","GOC:jid","PMID:16226447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"forebrain neuroblast division","termid":"GO:0021873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in forebrain neuroblast division","synonyms":[{"name":"fibroblast growth factor receptor signalling pathway in forebrain neuroblast division","type":"exact"}],"termid":"GO:0021875"}


id: GO:0097326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a melanocyte to another cell via adhesion molecules.","definition_xrefs":["GOC:uh","PMID:22637532","CL:0000148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell-cell adhesion","termid":"GO:0090136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"melanocyte adhesion","termid":"GO:0097326"}


id: GO:2000119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sodium-dependent phosphate transport.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of sodium-dependent phosphate transport","termid":"GO:2000118"},{"relation_name":"negatively_regulates","term_name":"sodium-dependent phosphate transport","termid":"GO:0044341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of sodium-dependent phosphate transport","termid":"GO:2000119"}


id: PBO:0016057
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human C9orf64","termid":"PBO:0016057"}


id: GO:0033935
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-beta-D-glucosidic links in oligoxyloglucans so as to remove successive isoprimeverose (i.e. alpha-xylo-1,6-beta-D-glucosyl-) residues from the non-reducing chain ends.","definition_xrefs":["EC:3.2.1.120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"oligoxyloglucan beta-glycosidase activity","secondary_identifiers":["MetaCyc:3.2.1.120-RXN"],"synonyms":[{"name":"isoprimeverose-producing oligoxyloglucan hydrolase activity","type":"related"},{"name":"oligoxyloglucan hydrolase activity","type":"related"},{"name":"oligoxyloglucan xyloglucohydrolase activity","type":"related"}],"termid":"GO:0033935"}


id: PBO:0017647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cenp-W ortholog","termid":"PBO:0017647"}


id: FYPO:0003311
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phosphoribosylaminoimidazolecarboxamide formyltransferase (AICAR formyltransferase) activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal phosphoribosylaminoimidazolecarboxamide formyltransferase activity","synonyms":[{"name":"abnormal AICAR formyltransferase activity","type":"exact"}],"termid":"FYPO:0003311"}


id: PATO:0001482
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's standing out or projecting beyond a surface or line.","definition_xrefs":["Dictionary.com:Dictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protruding","termid":"PATO:0001598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prominent","termid":"PATO:0001482"}


id: PBO:0034692
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_lysophosphatidylcholine_level","termid":"PBO:0034692"}


id: PBO:0071450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 56","termid":"PBO:0071450"}


id: PBO:0059822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metadherin pseudogene 2","termid":"PBO:0059822"}


id: GO:1904342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of colon smooth muscle contraction.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24170253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904305"},{"relation_name":"is_a","term_name":"regulation of colon smooth muscle contraction","termid":"GO:1904341"},{"relation_name":"negatively_regulates","term_name":"colon smooth muscle contraction","termid":"GO:1990765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of colon smooth muscle contraction","synonyms":[{"name":"down regulation of colon smooth muscle contraction","type":"exact"},{"name":"down-regulation of colon smooth muscle contraction","type":"exact"},{"name":"downregulation of colon smooth muscle contraction","type":"exact"},{"name":"inhibition of colon smooth muscle contraction","type":"narrow"}],"termid":"GO:1904342"}


id: PBO:0027106
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_termination_of_RNA_polymerase_II_transcription","termid":"PBO:0027106"}


id: PBO:0069410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 670, pseudogene","termid":"PBO:0069410"}


id: GO:0019389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving glucuronosides, any compound formed by combination in glycosidic linkage of a hydroxy compound with the anomeric carbon atom of a glucuronate.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete glucuronoside metabolic process (obsolete GO:0019389)","synonyms":[{"name":"glucuronide metabolic process","type":"exact"},{"name":"glucuronide metabolism","type":"exact"},{"name":"glucuronoside metabolism","type":"exact"}],"termid":"GO:0019389"}


id: FYPO:0004550
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to hydroxyurea","synonyms":[{"name":"abolished protein phosphorylation during cellular response to HU","type":"exact"},{"name":"abolished protein phosphorylation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0004550"}


id: PBO:0060971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFYB pseudogene 1","termid":"PBO:0060971"}


id: PBO:0048892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 12, pseudogene","termid":"PBO:0048892"}


id: GO:1990138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Long distance growth of a single neuron projection involved in cellular development. A neuron projection is a prolongation or process extending from a nerve cell, e.g. an axon or dendrite.","definition_xrefs":["GOC:rl","GOC:BHF","PMID:22790009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"neuron projection morphogenesis","termid":"GO:0048812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection extension","synonyms":[{"name":"neurite extension","type":"narrow"},{"name":"neuron process extension","type":"exact"},{"name":"neuron protrusion extension","type":"exact"},{"name":"neuronal cell projection extension","type":"exact"}],"termid":"GO:1990138"}


id: PBO:0083036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta(9) fatty acid desaturase; required for monounsaturated fatty acid synthesis and for normal distribution of mitochondria","termid":"PBO:0083036"}


id: GO:1902296
data:
  {"annotated_genes":["SJAG_00729","SJAG_00884","SJAG_03495","SJAG_01762","SJAG_02199","SJAG_00272","SJAG_05197","SJAG_01823","SJAG_02818","SJAG_02908","SJAG_04879","SJAG_04190","SJAG_00874","SJAG_02667","SJAG_04877","SJAG_00863","SJAG_03780","SJAG_01010","SJAG_04210","SJAG_00814","SJAG_02182"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85639,91295,103034,103402,90021,111346,111477,109631,100287,105997,91328,91114,111174,105162,108337,98891,103299,108576,100976,109222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902983"},{"annotations":[91297,105164,100978,98893,100291,114248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903459"},{"annotations":[90023,100292,85640,91329,100979,91298,103404,103035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903460"}]},"cv_name":"biological_process","definition":"Any DNA strand elongation that is involved in cell cycle DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand elongation involved in DNA replication","termid":"GO:0006271"},{"relation_name":"part_of","term_name":"cell cycle DNA replication","termid":"GO:0044786"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_01010":null,"SJAG_01762":null,"SJAG_01823":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02667":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03495":null,"SJAG_03780":null,"SJAG_04190":null,"SJAG_04210":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_05197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"DNA strand elongation involved in cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA replication elongation involved in cell cycle DNA replication","type":"exact"},{"name":"DNA strand elongation during DNA replication involved in cell cycle DNA replication","type":"related"}],"termid":"GO:1902296","terms_by_termid":{"GO:1902983":null,"GO:1903459":null,"GO:1903460":null}}


id: PBO:0055372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2801","termid":"PBO:0055372"}


id: GO:0070116
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A thylakoid located in an organellar chromatophore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thylakoid","termid":"GO:0009579"},{"relation_name":"part_of","term_name":"organellar chromatophore","termid":"GO:0070111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"organellar chromatophore thylakoid","synonyms":[{"name":"Paulinella-type chromatophore thylakoid","type":"exact"}],"termid":"GO:0070116"}


id: GO:0102757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H2O = NADH + hydrogenphosphate.","definition_xrefs":["GOC:pz","RHEA:60664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"NADPH phosphatase activity","secondary_identifiers":["MetaCyc:RXN-7703","EC:3.1.3.108"],"termid":"GO:0102757"}


id: PBO:0067344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 441, pseudogene","termid":"PBO:0067344"}


id: PBO:0048695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLIS family zinc finger 3","termid":"PBO:0048695"}


id: PBO:0077267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 9","termid":"PBO:0077267"}


id: PBO:0069371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 631, pseudogene","termid":"PBO:0069371"}


id: GO:0051068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dihydrolipoamide, the reduced form of lipoamide, produced as an intermediate in the reactions in which lipoamide acts as a cofactor.","definition_xrefs":["ISBN:0721601464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"dihydrolipoamide metabolic process","synonyms":[{"name":"dihydrolipoamide metabolism","type":"exact"},{"name":"dihydrolipoamide reduction","type":"narrow"},{"name":"dihydrothioctamide metabolic process","type":"exact"},{"name":"dihydrothioctamide metabolism","type":"exact"}],"termid":"GO:0051068"}


id: PBO:0054938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2352","termid":"PBO:0054938"}


id: GO:0044104
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,5-dioxopentanoate + NAD+ + H2O = 2-oxoglutarate + NADH + H+.","definition_xrefs":["PMID:17202142","PMID:16835232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"2,5-dioxovalerate dehydrogenase (NAD+) activity","synonyms":[{"name":"2,5-dioxopentanoate dehydrogenase (NAD+) activity","type":"exact"},{"name":"2,5-dioxopentanoate:NAD+ 5-oxidoreductase activity","type":"exact"}],"termid":"GO:0044104"}


id: PBO:0026970
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_plasma_membrane_sterol_distribution","termid":"PBO:0026970"}


id: PBO:0011430
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in vertebrate","termid":"PBO:0011430"}


id: PBO:0057278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 500a","termid":"PBO:0057278"}


id: GO:0042128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The nitrogen metabolic process that encompasses the uptake of nitrate from the environment and reduction to ammonia, and results in the incorporation of nitrogen derived from nitrate into cellular substances.","definition_xrefs":["PMID:10542156","GOC:mah","GOC:das","PMID:8122899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate metabolic process","termid":"GO:0042126"},{"relation_name":"is_a","term_name":"nitrogen cycle metabolic process","termid":"GO:0071941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071941"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0071941"],"is_obsolete":false,"name":"nitrate assimilation","secondary_identifiers":["MetaCyc:PWY-381"],"synonyms":[{"name":"assimilatory nitrate reduction","type":"exact"}],"termid":"GO:0042128"}


id: PBO:0044703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 4","termid":"PBO:0044703"}


id: GO:0010829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of glucose transport across a membrane. Glucose transport is the directed movement of the hexose monosaccharide glucose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucose transmembrane transport","termid":"GO:0010827"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"negatively_regulates","term_name":"glucose transmembrane transport","termid":"GO:1904659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glucose transmembrane transport","synonyms":[{"name":"negative regulation of glucose transport","type":"related"}],"termid":"GO:0010829"}


id: GO:1905304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac myofibril assembly.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:rl","GOC:TermGenie","PMID:16151019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"is_a","term_name":"regulation of actomyosin structure organization","termid":"GO:0110020"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"regulates","term_name":"cardiac myofibril assembly","termid":"GO:0055003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of cardiac myofibril assembly","synonyms":[{"name":"regulation of cardiac myofibril development","type":"exact"},{"name":"regulation of cardiac myofibril morphogenesis","type":"exact"},{"name":"regulation of heart myofibril assembly","type":"related"}],"termid":"GO:1905304"}


id: PBO:0016932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR98","termid":"PBO:0016932"}


id: PBO:0048310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 21","termid":"PBO:0048310"}


id: PBO:0034544
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_maintenance_of_protein_localization_in_vacuole,_with_protein_secreted","termid":"PBO:0034544"}


id: PR:O74322
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1202 gene.","definition_xrefs":["UniProtKB:O74322","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S12-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.02c","synonyms":[{"name":"Spom972h-rps1202","type":"exact"}],"termid":"PR:O74322"}


id: GO:0060979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The differentiation of endothelial cells from progenitor cells that contributes to blood vessel development in the heart, and the de novo formation of blood vessels and tubes.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculogenesis","termid":"GO:0001570"},{"relation_name":"part_of","term_name":"coronary vasculature morphogenesis","termid":"GO:0060977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vasculogenesis involved in coronary vascular morphogenesis","synonyms":[{"name":"coronary vasculogenesis","type":"exact"},{"name":"vasculogenesis involved in coronary blood vessel morphogenesis","type":"exact"}],"termid":"GO:0060979"}


id: GO:1904158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an axonemal central apparatus.","definition_xrefs":["GO_REF:0000079","GOC:cilia","PMID:9295136","GOC:TermGenie","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"axoneme assembly","termid":"GO:0035082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0000226","GO:0044085","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"axonemal central apparatus assembly","synonyms":[{"name":"axonemal central apparatus formation","type":"exact"}],"termid":"GO:1904158"}


id: GO:1904499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of chromatin-mediated maintenance of transcription.","definition_xrefs":["GOC:BHF_telomere","GO_REF:0000058","GOC:TermGenie","GOC:BHF","GOC:nc","PMID:22723415"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of chromatin-mediated maintenance of transcription (obsolete GO:1904499)","termid":"GO:1904499"}


id: PBO:0113758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin-like histone chaperone/CENP-A amino terminus domain (NTD) isomerase Ani1/Fkbp39","termid":"PBO:0113758"}


id: GO:0097144
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An oligomeric protein complex consisting of BAX, a member of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["GOC:so","PMID:14634621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BAX complex","termid":"GO:0097144"}


id: PBO:0052602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KPNB1 divergent transcript","termid":"PBO:0052602"}


id: GO:1901992
data:
  {"annotated_genes":["SJAG_03126","SJAG_02451","SJAG_01805","SJAG_03592","SJAG_04140","SJAG_00256","SJAG_04573","SJAG_02169","SJAG_00883","SJAG_02592","SJAG_04968","SJAG_03353","SJAG_00214","SJAG_03681","SJAG_01837","SJAG_02380","SJAG_03602","SJAG_01311","SJAG_02723","SJAG_02336","SJAG_04486","SJAG_02810","SJAG_03067","SJAG_03309","SJAG_02342","SJAG_04259","SJAG_01297","SJAG_01000","SJAG_02498","SJAG_03591","SJAG_01901","SJAG_00082","SJAG_00216","SJAG_01825","SJAG_03048","SJAG_03486","SJAG_04332","SJAG_04597","SJAG_01210","SJAG_01679","SJAG_03699","SJAG_01401","SJAG_01801","SJAG_00666","SJAG_00117","SJAG_01456","SJAG_02404"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110336,111970,99959,108020,104307,103285,109848,95647,86780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[90259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[108022,98436,86060,89807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031536"},{"annotations":[102701,105235,113148,97680,98437,101859,102014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900087"},{"annotations":[90429,90468,84116,88183,94494,97816,99557,104627,95058,112565,90600,103288,107261,84125,92390,89858,87780,112754,106397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010971"},{"annotations":[83921,97441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905287"},{"annotations":[93758,89861,107436,110337,110836,98444,98171,96199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"},{"annotations":[102017,107264,111974,87793,97682,104946,111410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007089"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic cell cycle phase transition.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie","PMID:22841721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle","termid":"GO:0045931"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle phase transition","termid":"GO:1901989"},{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle phase transition","termid":"GO:1901990"},{"relation_name":"positively_regulates","term_name":"mitotic cell cycle phase transition","termid":"GO:0044772"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00117":null,"SJAG_00214":null,"SJAG_00216":null,"SJAG_00256":null,"SJAG_00666":null,"SJAG_00883":null,"SJAG_01000":null,"SJAG_01210":null,"SJAG_01297":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_01456":null,"SJAG_01679":null,"SJAG_01801":null,"SJAG_01805":null,"SJAG_01825":null,"SJAG_01837":null,"SJAG_01901":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02342":null,"SJAG_02380":null,"SJAG_02404":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02810":null,"SJAG_03048":null,"SJAG_03067":null,"SJAG_03126":null,"SJAG_03309":null,"SJAG_03353":null,"SJAG_03486":null,"SJAG_03591":null,"SJAG_03592":null,"SJAG_03602":null,"SJAG_03681":null,"SJAG_03699":null,"SJAG_04140":null,"SJAG_04259":null,"SJAG_04332":null,"SJAG_04486":null,"SJAG_04573":null,"SJAG_04597":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044772"}],"interesting_parent_ids":["GO:0044772","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic cell cycle phase transition","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of mitotic cell cycle phase transition","type":"narrow"},{"name":"up regulation of mitotic cell cycle phase transition","type":"exact"},{"name":"up-regulation of mitotic cell cycle phase transition","type":"exact"},{"name":"upregulation of mitotic cell cycle phase transition","type":"exact"}],"termid":"GO:1901992","terms_by_termid":{"GO:0007089":null,"GO:0010971":null,"GO:0031536":null,"GO:0045842":null,"GO:0140499":null,"GO:1900087":null,"GO:1902426":null,"GO:1905287":null}}


id: MOD:00034
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-cysteine residues to form L-cystine.","definition_xrefs":["PubMed:8344916","PubMed:2001356","PubMed:2076469","PubMed:3083866","PubMed:7918467","PubMed:366603","RESID:AA0025#CYS2","ChEBI:16283","PubMed:1988019","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disulfide crosslinked residues","termid":"MOD:00689"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-cystine (cross-link)","synonyms":[{"name":"(2R,2'R)-3,3'-disulfane-1,2-diylbis(2-aminopropanoic acid)","type":"exact"},{"name":"2-amino-3-(2-amino-2-carboxy-ethyl)disulfanyl-propanoic acid","type":"related"},{"name":"3,3'-disulfane-1,2-diylbis(2-azanylpropanoic acid)","type":"exact"},{"name":"3,3'-dithiobis(2-aminopropanoic acid)","type":"exact"},{"name":"3,3'-dithiobisalanine","type":"exact"},{"name":"3,3'-dithiodialanine","type":"exact"},{"name":"Cys2","type":"exact"},{"name":"Cystine ((Cys)2)","type":"exact"},{"name":"DISULFID","type":"exact"},{"name":"DISULFID Interchain","type":"exact"},{"name":"L-cystine","type":"exact"},{"name":"XLNK-SCys-SCys","type":"exact"},{"name":"beta,beta'-diamino-beta,beta'-dicarboxydiethyldisulfide","type":"exact"},{"name":"beta,beta'-dithiodialanine","type":"exact"},{"name":"bis(alpha-aminopropionic acid)-beta-disulfide","type":"exact"},{"name":"bis(beta-amino-beta-carboxyethyl)disulfide","type":"exact"},{"name":"dicysteine","type":"exact"}],"termid":"MOD:00034"}


id: GO:0031361
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the thylakoid membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of thylakoid membrane (obsolete GO:0031361)","synonyms":[{"name":"integral to thylakoid membrane","type":"narrow"}],"termid":"GO:0031361"}


id: GO:0010724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of definitive erythrocyte differentiation. Definitive erythrocyte differentiation occurs as part of the process of definitive hemopoiesis.","definition_xrefs":["GOC:add","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of erythrocyte differentiation","termid":"GO:0045646"},{"relation_name":"regulates","term_name":"definitive erythrocyte differentiation","termid":"GO:0060318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of definitive erythrocyte differentiation","synonyms":[{"name":"regulation of definitive RBC differentiation","type":"exact"},{"name":"regulation of definitive erythropoiesis","type":"exact"},{"name":"regulation of definitive red blood cell differentiation","type":"exact"}],"termid":"GO:0010724"}


id: GO:0010691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the synthesis of RNA from ribosomal protein genes by RNA polymerase II, originating at an RNA polymerase II promoter, as a result of a stimulus reflecting the presence, absence, or concentration of nutrients.","definition_xrefs":["GOC:tb","GOC:txnOH","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ribosomal protein gene transcription by RNA polymerase II","termid":"GO:0010688"},{"relation_name":"is_a","term_name":"cellular response to nutrient levels","termid":"GO:0031669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006355","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to nutrient levels","termid":"GO:0010691"}


id: PBO:0068898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 140, pseudogene","termid":"PBO:0068898"}


id: PBO:0074362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes flexible hinge domain containing 1","termid":"PBO:0074362"}


id: PBO:0040154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASH2L pseudogene 3","termid":"PBO:0040154"}


id: GO:0072081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the tubules arranged along the proximal/distal axis of the nephron acquire their identity.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"segment specification","termid":"GO:0007379"},{"relation_name":"is_a","term_name":"pattern specification involved in kidney development","termid":"GO:0061004"},{"relation_name":"part_of","term_name":"proximal/distal pattern formation involved in nephron development","termid":"GO:0072047"},{"relation_name":"part_of","term_name":"nephron tubule formation","termid":"GO:0072079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of nephron tubule identity","termid":"GO:0072081"}


id: PBO:0063156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paired box 2","termid":"PBO:0063156"}


id: PBO:0002751
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Niemann-Pick disease","termid":"PBO:0002751"}


id: GO:0140404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a molecule secreted by a symbiont that results in the modulation (either activation or suppression) of a host innate immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:21467214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host innate immune response","termid":"GO:0052167"},{"relation_name":"is_a","term_name":"effector-mediated modulation of host defenses by symbiont","termid":"GO:0140415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated perturbation of host innate immune response by symbiont","synonyms":[{"name":"effector mediated modulation of host immune response by symbiont","type":"exact"},{"name":"effector triggered modulation of host immune response by symbiont","type":"exact"},{"name":"effector-dependent modulation of host immune response by symbiont","type":"exact"},{"name":"effector-mediated modulation of host immunity","type":"exact"},{"name":"effector-mediated modulation of host innate immune response by symbiont","type":"exact"},{"name":"effector-triggered modulation of host immune response by symbiont","type":"exact"}],"termid":"GO:0140404"}


id: GO:0106111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic cohesin ssDNA (lagging strand) loading.","definition_xrefs":["PMID:29358048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cohesin loading","termid":"GO:1905405"},{"relation_name":"regulates","term_name":"mitotic cohesin ssDNA (lagging strand) loading","termid":"GO:0062022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic cohesin ssDNA (lagging strand) loading","termid":"GO:0106111"}


id: GO:1902693
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of superoxide dismutase activity.","definition_xrefs":["PMID:10026301","GOC:bhm","GO_REF:0000088","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"superoxide dismutase complex","termid":"GO:1902693"}


id: PATO:0000188
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality inhering in a bearer by virtue of the bearer's having or lacking skillful and effective interaction of movement.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral quality","termid":"PATO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coordination","termid":"PATO:0000188"}


id: GO:0044454
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a nuclear chromosome, a chromosome that encodes the nuclear genome and is found in the nucleus of a eukaryotic cell during the cell cycle phases when the nucleus is intact.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear chromosome part (obsolete GO:0044454)","termid":"GO:0044454"}


id: PBO:0090703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial conserved fungal membrane protein","termid":"PBO:0090703"}


id: SO:0000760
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000760 YAC_clone (obsolete SO:0000760)","termid":"SO:0000760"}


id: PBO:0064579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member B","termid":"PBO:0064579"}


id: FYECO:0000368
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which tamoxifen was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ tamoxifen","termid":"FYECO:0000368"}


id: PBO:0072548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory associated protein of MTOR complex 1","termid":"PBO:0072548"}


id: PBO:0078478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 2-1","termid":"PBO:0078478"}


id: PBO:0029836
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-microtubule_bundles_present_in_increased_numbers","termid":"PBO:0029836"}


id: GO:0009810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving stilbenes, a class of polyketides formed from a molecule of cinnamic acid and three molecules of malonyl-CoA.","definition_xrefs":["ISBN:3110116251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stilbene metabolic process","synonyms":[{"name":"stilbene metabolism","type":"exact"}],"termid":"GO:0009810"}


id: SOFP:aminoacid
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"amino acid coded for by a tRNA transcript feature","definition_xrefs":["so:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aminoacid","termid":"SOFP:aminoacid"}


id: SO:0000752
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that is involved in the regulation of transcription of a group of regulated genes.","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000752 gene_group_regulatory_region (obsolete SO:0000752)","synonyms":[{"name":"gene group regulatory region","type":"exact"}],"termid":"SO:0000752"}


id: MOD:00852
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a carboxamido group with a carboxyl group labeled with one (18)O.","definition_xrefs":["Unimod:366","PubMed:8382902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(18)O labeled deamidated residue","termid":"MOD:00851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1x(18)O labeled deamidated residue","termid":"MOD:00852"}


id: PBO:0066368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol dehydrogenase 11","termid":"PBO:0066368"}


id: PBO:0064148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plakophilin 1","termid":"PBO:0064148"}


id: PBO:0045488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Down syndrome critical region 4","termid":"PBO:0045488"}


id: PBO:0002979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine transporter (predicted)","termid":"PBO:0002979"}


id: PBO:0001563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination protein Irc6 (predicted)","termid":"PBO:0001563"}


id: PBO:0091311
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of Cut Nine","termid":"PBO:0091311"}


id: GO:0031631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of synaptic vesicle fusion to the presynaptic membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vesicle fusion","termid":"GO:0031339"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle fusion to presynaptic active zone membrane","termid":"GO:0031630"},{"relation_name":"is_a","term_name":"negative regulation of synaptic vesicle membrane organization","termid":"GO:1901633"},{"relation_name":"is_a","term_name":"negative regulation of synaptic vesicle exocytosis","termid":"GO:2000301"},{"relation_name":"negatively_regulates","term_name":"synaptic vesicle fusion to presynaptic active zone membrane","termid":"GO:0031629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0061024","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of synaptic vesicle fusion to presynaptic active zone membrane","synonyms":[{"name":"down regulation of synaptic vesicle fusion to presynaptic active zone membrane","type":"exact"},{"name":"down regulation of synaptic vesicle fusion to presynaptic membrane","type":"broad"},{"name":"down-regulation of synaptic vesicle fusion to presynaptic active zone membrane","type":"exact"},{"name":"down-regulation of synaptic vesicle fusion to presynaptic membrane","type":"broad"},{"name":"downregulation of synaptic vesicle fusion to presynaptic active zone membrane","type":"exact"},{"name":"downregulation of synaptic vesicle fusion to presynaptic membrane","type":"broad"},{"name":"inhibition of synaptic vesicle fusion to presynaptic membrane","type":"broad"},{"name":"negative regulation of synaptic vesicle fusion to pre-synaptic active zone membrane","type":"exact"},{"name":"negative regulation of synaptic vesicle fusion to pre-synaptic membrane","type":"broad"},{"name":"negative regulation of synaptic vesicle fusion to presynaptic membrane","type":"broad"}],"termid":"GO:0031631"}


id: PBO:0024851
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae STE6","termid":"PBO:0024851"}


id: PR:P30261
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc27 gene.","definition_xrefs":["UniProtKB:P30261","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1734.02c","synonyms":[{"name":"Spom972h-cdc27","type":"exact"},{"name":"cell division control protein 27 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P30261"}


id: PBO:0063070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pannexin 3","termid":"PBO:0063070"}


id: GO:0070976
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Toll-Interleukin receptor (TIR) domain of a protein. The TIR domain is an intracellular 200 residue domain that is found in the Toll protein, the interleukin-1 receptor (IL-1R), and MyD88; it contains three highly-conserved regions, and mediates protein-protein interactions between the Toll-like receptors (TLRs) and signal-transduction components.","definition_xrefs":["GOC:mah","InterPro:IPR000157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"TIR domain binding","synonyms":[{"name":"Toll-Interleukin receptor domain binding","type":"exact"}],"termid":"GO:0070976"}


id: GO:0045886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of synaptic assembly at neuromuscular junction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic assembly at neuromuscular junction","termid":"GO:0008582"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"negative regulation of synapse assembly","termid":"GO:0051964"},{"relation_name":"is_a","term_name":"negative regulation of neuromuscular junction development","termid":"GO:1904397"},{"relation_name":"negatively_regulates","term_name":"synaptic assembly at neuromuscular junction","termid":"GO:0051124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of synaptic assembly at neuromuscular junction","synonyms":[{"name":"down regulation of synaptic growth at neuromuscular junction","type":"exact"},{"name":"down-regulation of synaptic growth at neuromuscular junction","type":"exact"},{"name":"downregulation of synaptic growth at neuromuscular junction","type":"exact"},{"name":"inhibition of synaptic growth at neuromuscular junction","type":"narrow"},{"name":"negative regulation of synaptic growth at neuromuscular junction","type":"related"}],"termid":"GO:0045886"}


id: PR:Q10659
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spo14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane glycoprotein spo14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.01","synonyms":[{"name":"SEC12-like protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-spo14","type":"exact"},{"name":"sporulation-specific protein 14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10659"}


id: PATO:0000034
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000034 protein concentration (obsolete PATO:0000034)","termid":"PATO:0000034"}


id: SO:0001225
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is silenced by histone modification.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"silenced_by_histone_modification","termid":"SO:0001221"},{"relation_name":"is_a","term_name":"silenced_gene","termid":"SO:0000127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_silenced_by_histone_modification","synonyms":[{"name":"gene silenced by histone modification","type":"exact"}],"termid":"SO:0001225"}


id: PBO:0028016
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_Rab_geranylgeranyltransferase_activity","termid":"PBO:0028016"}


id: GO:1902959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process.","definition_xrefs":["GOC:sjp","PMID:24577224","GOC:TermGenie","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endopeptidase activity","termid":"GO:0052548"},{"relation_name":"is_a","term_name":"regulation of amyloid precursor protein catabolic process","termid":"GO:1902991"},{"relation_name":"is_a","term_name":"regulation of aspartic-type peptidase activity","termid":"GO:1905245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process","synonyms":[{"name":"regulation of aspartate protease activity involved in APP catabolic process","type":"exact"},{"name":"regulation of aspartate protease activity involved in APP catabolism","type":"exact"},{"name":"regulation of aspartate protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of aspartate protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of aspartate protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of aspartate protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of aspartic protease activity involved in APP catabolic process","type":"exact"},{"name":"regulation of aspartic protease activity involved in APP catabolism","type":"exact"},{"name":"regulation of aspartic protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of aspartic protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of aspartic protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of aspartic-type endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"regulation of aspartic-type endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of aspartyl protease activity involved in APP catabolic process","type":"exact"},{"name":"regulation of aspartyl protease activity involved in APP catabolism","type":"exact"},{"name":"regulation of aspartyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of aspartyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of aspartyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of carboxyl protease activity involved in APP catabolic process","type":"exact"},{"name":"regulation of carboxyl protease activity involved in APP catabolism","type":"exact"},{"name":"regulation of carboxyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of carboxyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of carboxyl protease activity involved in amyloid precursor protein degradation","type":"exact"}],"termid":"GO:1902959"}


id: PBO:0051267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa locus","termid":"PBO:0051267"}


id: GO:0102334
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ditrans,polycis-undecaprenyl phosphate + UDP-N,N'-diacetylbacillosamine = N,N'-diacetyl-alpha-D-bacillosaminyl-diphospho-tri-trans,hepta-cis-undecaprenol + UMP.","definition_xrefs":["GOC:pz","EC:2.7.8.36"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016780","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"N,N'-diacetylbacilliosaminyl-1-phosphate transferase activity","secondary_identifiers":["MetaCyc:RXN-13269","RHEA:34515"],"termid":"GO:0102334"}


id: PBO:0053753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 993","termid":"PBO:0053753"}


id: GO:1902115
data:
  {"annotated_genes":["SJAG_04638","SJAG_00718","SJAG_04464","SJAG_03851","SJAG_03048","SJAG_01837","SJAG_05289","SJAG_02332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905560"},{"annotations":[104708,104617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000786"},{"annotations":[112755,85714,98439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905561"},{"annotations":[107496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[107073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901673"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of organelle assembly.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"is_a","term_name":"regulation of cellular component biogenesis","termid":"GO:0044087"},{"relation_name":"regulates","term_name":"organelle assembly","termid":"GO:0070925"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00718":null,"SJAG_01837":null,"SJAG_02332":null,"SJAG_03048":null,"SJAG_03851":null,"SJAG_04464":null,"SJAG_04638":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of organelle assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902115","terms_by_termid":{"GO:0110161":null,"GO:1901673":null,"GO:1905560":null,"GO:1905561":null,"GO:2000786":null}}


id: PBO:0073128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC14 like lipid binding 1","termid":"PBO:0073128"}


id: PBO:0074042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 25","termid":"PBO:0074042"}


id: FYPO:0008255
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 4 of histone H3 occurs to a lower extent than normal in regions containing protein-coding genes.","definition_xrefs":["PMID:25356590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K4 acetylation during vegetative growth","termid":"FYPO:0004239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H3-K4 acetylation at protein coding gene during vegetative growth","termid":"FYPO:0008255"}


id: PBO:0059473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSL complex subunit 3","termid":"PBO:0059473"}


id: GO:1901712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of homoserine biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of homoserine biosynthetic process","termid":"GO:1901710"},{"relation_name":"is_a","term_name":"positive regulation of amino acid biosynthetic process","termid":"GO:2000284"},{"relation_name":"positively_regulates","term_name":"homoserine biosynthetic process","termid":"GO:0009090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"positive regulation of homoserine biosynthetic process","synonyms":[{"name":"activation of homoserine anabolism","type":"exact"},{"name":"activation of homoserine biosynthesis","type":"exact"},{"name":"activation of homoserine biosynthetic process","type":"narrow"},{"name":"activation of homoserine formation","type":"exact"},{"name":"activation of homoserine synthesis","type":"exact"},{"name":"positive regulation of homoserine anabolism","type":"exact"},{"name":"positive regulation of homoserine biosynthesis","type":"exact"},{"name":"positive regulation of homoserine formation","type":"exact"},{"name":"positive regulation of homoserine synthesis","type":"exact"},{"name":"up regulation of homoserine anabolism","type":"exact"},{"name":"up regulation of homoserine biosynthesis","type":"exact"},{"name":"up regulation of homoserine biosynthetic process","type":"exact"},{"name":"up regulation of homoserine formation","type":"exact"},{"name":"up regulation of homoserine synthesis","type":"exact"},{"name":"up-regulation of homoserine anabolism","type":"exact"},{"name":"up-regulation of homoserine biosynthesis","type":"exact"},{"name":"up-regulation of homoserine biosynthetic process","type":"exact"},{"name":"up-regulation of homoserine formation","type":"exact"},{"name":"up-regulation of homoserine synthesis","type":"exact"},{"name":"upregulation of homoserine anabolism","type":"exact"},{"name":"upregulation of homoserine biosynthesis","type":"exact"},{"name":"upregulation of homoserine biosynthetic process","type":"exact"},{"name":"upregulation of homoserine formation","type":"exact"},{"name":"upregulation of homoserine synthesis","type":"exact"}],"termid":"GO:1901712"}


id: FYPO:0007921
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to benzamidine. Cells stop growing (and may die) at a concentration of benzamidine that allows wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to benzamidine","synonyms":[{"name":"sensitive to benzamidine during vegetative growth","type":"exact"}],"termid":"FYPO:0007921"}


id: GO:0046144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving D-alanine and related amino acids.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete D-alanine family amino acid metabolic process (obsolete GO:0046144)","synonyms":[{"name":"D-alanine family amino acid metabolism","type":"exact"}],"termid":"GO:0046144"}


id: PBO:0006195
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-modified_by","termid":"PBO:0006195"}


id: PBO:0028355
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phosphatase_activity","termid":"PBO:0028355"}


id: PBO:0064371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripheral myelin protein 2","termid":"PBO:0064371"}


id: GO:0150047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"G protein-coupled neurotransmitter receptor activity, occurring in the presynaptic membrane, involved in regulation of presynaptic membrane potential.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:11498050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled neurotransmitter receptor activity","termid":"GO:0099528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled neurotransmitter receptor activity involved in regulation of presynaptic membrane potential","synonyms":[{"name":"G-protein coupled neurotransmitter receptor activity involved in regulation of presynaptic membrane potential","type":"exact"}],"termid":"GO:0150047"}


id: PBO:0055167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2589","termid":"PBO:0055167"}


id: GO:0045660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neutrophil differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of granulocyte differentiation","termid":"GO:0030854"},{"relation_name":"is_a","term_name":"regulation of neutrophil differentiation","termid":"GO:0045658"},{"relation_name":"positively_regulates","term_name":"neutrophil differentiation","termid":"GO:0030223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil differentiation","synonyms":[{"name":"activation of neutrophil differentiation","type":"narrow"},{"name":"stimulation of neutrophil differentiation","type":"narrow"},{"name":"up regulation of neutrophil differentiation","type":"exact"},{"name":"up-regulation of neutrophil differentiation","type":"exact"},{"name":"upregulation of neutrophil differentiation","type":"exact"}],"termid":"GO:0045660"}


id: PBO:0074707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 73A","termid":"PBO:0074707"}


id: PBO:0055990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and transmembrane domains 2","termid":"PBO:0055990"}


id: GO:1900742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to pH.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"negative regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900429"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:1900741"},{"relation_name":"negatively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:0036177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of filamentous growth of a population of unicellular organisms in response to pH","synonyms":[{"name":"down regulation of filamentous growth of a population of unicellular organisms in response to pH","type":"exact"},{"name":"down-regulation of filamentous growth of a population of unicellular organisms in response to pH","type":"exact"},{"name":"downregulation of filamentous growth of a population of unicellular organisms in response to pH","type":"exact"},{"name":"inhibition of filamentous growth of a population of unicellular organisms in response to pH","type":"narrow"}],"termid":"GO:1900742"}


id: GO:0006979
data:
  {"annotated_genes":["SJAG_03924","SJAG_01855","SJAG_03903","SJAG_03414","SJAG_02945","SJAG_01292","SJAG_03828","SJAG_04399","SJAG_04823","SJAG_03330","SJAG_02592","SJAG_05014","SJAG_06621","SJAG_04953","SJAG_00365","SJAG_05181","SJAG_00141","SJAG_01734","SJAG_03886","SJAG_04788","SJAG_04632","SJAG_04125","SJAG_02249","SJAG_06622","SJAG_02515","SJAG_04287","SJAG_00996","SJAG_03166","SJAG_02433","SJAG_00419","SJAG_01216","SJAG_01084","SJAG_01162","SJAG_04036","SJAG_00027","SJAG_02044","SJAG_04311","SJAG_03896","SJAG_00984","SJAG_02495","SJAG_02485","SJAG_01199","SJAG_06611","SJAG_02135","SJAG_00668","SJAG_04403","SJAG_03653","SJAG_02573","SJAG_03303","SJAG_02858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101086,96059,113444,91256,104885,114354],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[103858,104990,74118,86154,88203,97917,85467,94013,112807,72348,104989,104987,84629,104985,104991,92049,89317,89616,97863,110808,104988,109569,102648,86944,93681,67442,86253,97399,91626,110531,101269,90424,97052,104986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034599"},{"annotations":[96060],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034614"},{"annotations":[87571,85866,86255],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:2000815"},{"annotations":[67551,96218,64544,85468,106146,85045,58036,89182,106190,95333],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.","definition_xrefs":["PMID:12115731","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"}],"gene_count":50,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00141":null,"SJAG_00365":null,"SJAG_00419":null,"SJAG_00668":null,"SJAG_00984":null,"SJAG_00996":null,"SJAG_01084":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01292":null,"SJAG_01734":null,"SJAG_01855":null,"SJAG_02044":null,"SJAG_02135":null,"SJAG_02249":null,"SJAG_02433":null,"SJAG_02485":null,"SJAG_02495":null,"SJAG_02515":null,"SJAG_02573":null,"SJAG_02592":null,"SJAG_02858":null,"SJAG_02945":null,"SJAG_03166":null,"SJAG_03303":null,"SJAG_03330":null,"SJAG_03414":null,"SJAG_03653":null,"SJAG_03828":null,"SJAG_03886":null,"SJAG_03896":null,"SJAG_03903":null,"SJAG_03924":null,"SJAG_04036":null,"SJAG_04125":null,"SJAG_04287":null,"SJAG_04311":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05014":null,"SJAG_05181":null,"SJAG_06611":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to oxidative stress","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0006979","terms_by_termid":{"GO:0019430":null,"GO:0034599":null,"GO:0034614":null,"GO:0061692":null,"GO:2000815":null}}


id: PBO:0063864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piezo type mechanosensitive ion channel component 2","termid":"PBO:0063864"}


id: PBO:0048486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"germinal center associated signaling and motility like","termid":"PBO:0048486"}


id: GO:1902561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an origin recognition complex.","definition_xrefs":["PMID:11717425","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"origin recognition complex assembly","synonyms":[{"name":"ORC assembly","type":"exact"},{"name":"ORC formation","type":"exact"},{"name":"origin of replication recognition complex assembly","type":"exact"},{"name":"origin of replication recognition complex formation","type":"exact"},{"name":"origin recognition complex formation","type":"exact"}],"termid":"GO:1902561"}


id: GO:1904338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of dopaminergic neuron differentiation.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:15522889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron differentiation","termid":"GO:0045664"},{"relation_name":"regulates","term_name":"dopaminergic neuron differentiation","termid":"GO:0071542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of dopaminergic neuron differentiation","termid":"GO:1904338"}


id: PBO:0111870
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-type cyclin","termid":"PBO:0111870"}


id: PBO:0079831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uromodulin","termid":"PBO:0079831"}


id: PBO:0083065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrosphingosine 1-phosphate phosphatase; membrane protein involved in sphingolipid metabolism; YSR3 has a paralog, LCB3, that arose from the whole genome duplication","termid":"PBO:0083065"}


id: PBO:0003886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S9 (predicted)","termid":"PBO:0003886"}


id: FYPO:0007215
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at one or more lncRNA genes is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to chromatin during vegetative growth","termid":"FYPO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to chromatin at lncRNA gene","synonyms":[{"name":"abolished protein localisation to chromatin at lncRNA gene during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromatin at lncRNA gene during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromatin at long non-coding RNA gene","type":"exact"},{"name":"protein localization to chromatin at lncRNA gene abolished","type":"exact"}],"termid":"FYPO:0007215"}


id: PBO:0088716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate phosphatase","termid":"PBO:0088716"}


id: FYPO:0001585
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell tip is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip during vegetative growth","termid":"FYPO:0001584"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to cell tip during vegetative growth","synonyms":[{"name":"abolished protein localisation to cell tip during vegetative growth","type":"exact"},{"name":"abolished protein localization to cell end during vegetative growth","type":"exact"},{"name":"abolished protein localization to cell tip during mitotic cell cycle","type":"related"},{"name":"protein localization to cell tip abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001585"}


id: GO:0005593
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen trimer that associates with collagen fibrils and consists of collagen monomers that contain two or more relatively short triple-helical domains connected by non-triple-helical sequences.","definition_xrefs":["PMID:21421911","ISBN:0198599587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen trimer","termid":"GO:0005581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"FACIT collagen trimer","secondary_identifiers":["Wikipedia:FACIT_collagen"],"termid":"GO:0005593"}


id: PBO:0072236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 11","termid":"PBO:0072236"}


id: PATO:0002541
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Pertaining to the ability or tendency of an organism or cell to maintain internal equilibrium by adjusting its physiological processes.","definition_xrefs":["GO:0042592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organismal quality","termid":"PATO:0001995"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeostatic","termid":"PATO:0002541"}


id: FYPO:0003997
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA primase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal DNA primase activity","termid":"FYPO:0003995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000002","FYPO:0000707","FYPO:0000293","FYPO:0000661","FYPO:0005447","FYPO:0000294","FYPO:0000652"],"is_obsolete":false,"name":"decreased DNA primase activity","synonyms":[{"name":"reduced DNA primase activity","type":"exact"}],"termid":"FYPO:0003997"}


id: PBO:0084810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; localized to the mitochondrial outer membrane","termid":"PBO:0084810"}


id: PATO:0001493
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"growth rate","termid":"PATO:0001492"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic growth","termid":"PATO:0001493"}


id: GO:0002866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of an acute inflammatory response to an antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of acute inflammatory response","termid":"GO:0002675"},{"relation_name":"is_a","term_name":"positive regulation of inflammatory response to antigenic stimulus","termid":"GO:0002863"},{"relation_name":"is_a","term_name":"regulation of acute inflammatory response to antigenic stimulus","termid":"GO:0002864"},{"relation_name":"positively_regulates","term_name":"acute inflammatory response to antigenic stimulus","termid":"GO:0002438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of acute inflammatory response to antigenic stimulus","synonyms":[{"name":"activation of acute inflammatory response to antigenic stimulus","type":"narrow"},{"name":"stimulation of acute inflammatory response to antigenic stimulus","type":"narrow"},{"name":"up regulation of acute inflammatory response to antigenic stimulus","type":"exact"},{"name":"up-regulation of acute inflammatory response to antigenic stimulus","type":"exact"},{"name":"upregulation of acute inflammatory response to antigenic stimulus","type":"exact"}],"termid":"GO:0002866"}


id: PBO:0080816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-3' exoribonuclease 1","termid":"PBO:0080816"}


id: PBO:0086265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that stimulates strand exchange; stimulates strand exchange by stabilizing the binding of Rad51p to single-stranded DNA; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; forms heterodimer with Rad55p","termid":"PBO:0086265"}


id: PBO:0049522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.P histone","termid":"PBO:0049522"}


id: PR:Q9P3T8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tubulin-specific chaperone C that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR15139:SF0","PRO:DNx","OMA:SCHPO01455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin-specific chaperone C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.08c","secondary_identifiers":["UniProtKB:Q9P3T8"],"synonyms":[{"name":"CFC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-TBCC","type":"exact"},{"name":"tubulin-folding cofactor C (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P3T8"}


id: PomGeneEx:0000004
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneEx","definition":"A gene expression qualifier that indicates that an RNA or protein is present at the same level or produced at the same rate under one set of conditions or at one indicated time as otherwise.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression qualifier","termid":"PomGeneEx:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unchanged","synonyms":[{"name":"gene expression unchanged","type":"exact"},{"name":"gene product level unchanged","type":"exact"}],"termid":"PomGeneEx:0000004"}


id: GO:1900088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of inositol biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:22307851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"inositol biosynthetic process","termid":"GO:0006021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of inositol biosynthetic process","synonyms":[{"name":"regulation of inositol anabolism","type":"exact"},{"name":"regulation of inositol biosynthesis","type":"exact"},{"name":"regulation of inositol formation","type":"exact"},{"name":"regulation of inositol synthesis","type":"exact"},{"name":"regulation of myo-inositol biosynthesis","type":"narrow"},{"name":"regulation of myo-inositol biosynthetic process","type":"narrow"},{"name":"regulation of vitamin Bh biosynthesis","type":"exact"},{"name":"regulation of vitamin Bh biosynthetic process","type":"exact"}],"termid":"GO:1900088"}


id: PBO:0065580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine kinase 2","termid":"PBO:0065580"}


id: PBO:0042731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein I pseudogene 1","termid":"PBO:0042731"}


id: PBO:0062941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolyl 4-hydroxylase, transmembrane","termid":"PBO:0062941"}


id: GO:0048599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an oocyte over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell development","termid":"GO:0007281"},{"relation_name":"part_of","term_name":"oocyte differentiation","termid":"GO:0009994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte development","termid":"GO:0048599"}


id: GO:0030815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cAMP metabolic process (obsolete GO:0030815)","synonyms":[{"name":"down regulation of cAMP metabolic process","type":"exact"},{"name":"down-regulation of cAMP metabolic process","type":"exact"},{"name":"downregulation of cAMP metabolic process","type":"exact"},{"name":"inhibition of cAMP metabolic process","type":"narrow"},{"name":"negative regulation of 3',5' cAMP metabolic process","type":"exact"},{"name":"negative regulation of 3',5' cAMP metabolism","type":"exact"},{"name":"negative regulation of 3',5'-cAMP metabolic process","type":"exact"},{"name":"negative regulation of 3',5'-cAMP metabolism","type":"exact"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate metabolic process","type":"exact"},{"name":"negative regulation of adenosine 3',5'-cyclophosphate metabolism","type":"exact"},{"name":"negative regulation of cAMP metabolism","type":"exact"},{"name":"negative regulation of cyclic AMP metabolic process","type":"exact"},{"name":"negative regulation of cyclic AMP metabolism","type":"exact"}],"termid":"GO:0030815"}


id: PBO:0059835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fission regulator 1","termid":"PBO:0059835"}


id: GO:0034140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 3 signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 3 signaling pathway","termid":"GO:0034139"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 3 signaling pathway","termid":"GO:0034138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 3 signaling pathway","synonyms":[{"name":"negative regulation of TLR3 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 3 signalling pathway","type":"exact"}],"termid":"GO:0034140"}


id: GO:0160107
data:
  {"annotated_genes":["SJAG_02386","SJAG_02637"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97029,108212],"is_not":false,"summary":null,"term":"GO:0160107"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine(58) in tRNA + S-adenosyl-L-methionine = H+ + N(1)-methyladenosine(58) in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (adenine) methyltransferase activity","termid":"GO:0016426"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02386":null,"SJAG_02637":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0016741","GO:0140101","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"tRNA (adenine(58)-N1)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6783492","Reactome:R-HSA-6787525","RHEA:43152"],"synonyms":[{"name":"tRNA (adenine(58)-N(1))-methyltransferase activity","type":"exact"},{"name":"tRNA (m(1)A(58)) methyltransferase","type":"exact"},{"name":"tRNA m(1)A(58) methyltransferase","type":"exact"}],"termid":"GO:0160107","terms_by_termid":{"GO:0160107":null}}


id: GO:0048387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of retinoic acid receptor signaling pathway activity.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of retinoic acid receptor signaling pathway","termid":"GO:0048385"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"retinoic acid receptor signaling pathway","termid":"GO:0048384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of retinoic acid receptor signaling pathway","synonyms":[{"name":"down regulation of retinoic acid receptor signaling pathway","type":"exact"},{"name":"down-regulation of retinoic acid receptor signaling pathway","type":"exact"},{"name":"downregulation of retinoic acid receptor signaling pathway","type":"exact"},{"name":"inhibition of retinoic acid receptor signaling pathway","type":"narrow"},{"name":"negative regulation of RAR signaling pathway","type":"exact"},{"name":"negative regulation of RAR signalling pathway","type":"exact"},{"name":"negative regulation of retinoic acid receptor signalling pathway","type":"exact"}],"termid":"GO:0048387"}


id: PBO:0081626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 556","termid":"PBO:0081626"}


id: GO:0015676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of vanadium (V) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transport","termid":"GO:0000041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"vanadium ion transport","termid":"GO:0015676"}


id: PBO:0030925
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_long-chain_fatty_acid-CoA_ligase_activity","termid":"PBO:0030925"}


id: PBO:0086303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with carboxyl methyl esterase activity; may have a role in demethylation of the phosphoprotein phosphatase catalytic subunit; also identified as a small subunit mitochondrial ribosomal protein","termid":"PBO:0086303"}


id: PBO:0056663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28 pseudogene 1","termid":"PBO:0056663"}


id: PBO:0074682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 63D","termid":"PBO:0074682"}


id: PBO:0084589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YDR474C was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YDR475C","termid":"PBO:0084589"}


id: GO:0034153
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 6 signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 6 signaling pathway","termid":"GO:0034151"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 6 signaling pathway","termid":"GO:0034150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 6 signaling pathway","synonyms":[{"name":"positive regulation of TLR6 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 6 signalling pathway","type":"exact"}],"termid":"GO:0034153"}


id: GO:0097101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in the specification of identity of a blood vessel endothelial cell. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment. A blood vessel endothelial cell is an endothelial cell of the vascular tree, which includes blood vessels and lymphatic vessels.","definition_xrefs":["PMID:21521739","CL:0002139","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial cell fate specification","termid":"GO:0060847"},{"relation_name":"part_of","term_name":"blood vessel endothelial cell fate commitment","termid":"GO:0060846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"blood vessel endothelial cell fate specification","termid":"GO:0097101"}


id: PBO:0062606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily R member 1 pseudogene","termid":"PBO:0062606"}


id: GO:0090486
data:
  {"annotated_genes":["SJAG_02817"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105174],"is_not":false,"summary":null,"term":"GO:0090486"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the oxygen atom of a nucleoside residue in a small RNA molecule. Reaction: S-adenosyl-L-methionine + small RNA = S-adenosyl-L-homocysteine + small RNA containing a 3'-terminal 2'-O-methylnucleotide.","definition_xrefs":["RHEA:37887","GOC:tb","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA 2'-O-methyltransferase activity","termid":"GO:0062105"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02817":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"small RNA 2'-O-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.386"],"synonyms":[{"name":"small RNA 2'-O-methyltransferase","type":"exact"}],"termid":"GO:0090486","terms_by_termid":{"GO:0090486":null}}


id: FYPO:0001085
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a polysaccharide measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"altered polysaccharide level during vegetative growth","synonyms":[{"name":"abnormal polysaccharide level during vegetative growth","type":"exact"},{"name":"altered cellular polysaccharide level during vegetative growth","type":"exact"},{"name":"altered polysaccharide level during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001085"}


id: PBO:0081980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and SCAN domain containing 5B","termid":"PBO:0081980"}


id: GO:1902911
data:
  {"annotated_genes":["SJAG_01799","SJAG_01456","SJAG_04312","SJAG_02404","SJAG_03931","SJAG_01149","SJAG_01274","SJAG_04614","SJAG_03048","SJAG_03699","SJAG_03802","SJAG_01716","SJAG_05017","SJAG_04232","SJAG_03525","SJAG_03206","SJAG_04420","SJAG_04368","SJAG_03160","SJAG_01581","SJAG_03591","SJAG_00973","SJAG_01245","SJAG_03967","SJAG_01587","SJAG_03501","SJAG_01207","SJAG_03618","SJAG_00100","SJAG_02374","SJAG_00901","SJAG_05978","SJAG_00512","SJAG_03421","SJAG_03695","SJAG_02785","SJAG_02183","SJAG_01401","SJAG_00142","SJAG_00758","SJAG_00150","SJAG_00995","SJAG_02441","SJAG_03602","SJAG_04280","SJAG_04486","SJAG_02275","SJAG_03789","SJAG_04140","SJAG_04502","SJAG_03061","SJAG_01213","SJAG_02057","SJAG_00439"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[113878,93931,96032,90864,83897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990316"},{"annotations":[97899,96495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005952"},{"annotations":[95052,99549,94488,112071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110115"},{"annotations":[113069,106966,91863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070692"},{"annotations":[84282,87785,104922,97673,113143,101054,102302,102397,107244,105083,98407,100386,101734,102008,104405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000307"},{"annotations":[108090,113347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031431"},{"annotations":[91012,114618,100175,87739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090730"},{"annotations":[106969,91864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019908"},{"annotations":[85271,112215,114288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031588"},{"annotations":[105085,104925],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070691"},{"annotations":[91315,114345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009365"},{"annotations":[87232,104457,89792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005956"},{"annotations":[88217,86317,85953,102085,99214,104536,105033,110896,111206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005675"},{"annotations":[102086,108143,109034],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070985"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of protein kinase activity.","definition_xrefs":["GOC:TermGenie","GOC:bhm","PMID:24606918","GO_REF:0000088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"}],"gene_count":54,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00142":null,"SJAG_00150":null,"SJAG_00439":null,"SJAG_00512":null,"SJAG_00758":null,"SJAG_00901":null,"SJAG_00973":null,"SJAG_00995":null,"SJAG_01149":null,"SJAG_01207":null,"SJAG_01213":null,"SJAG_01245":null,"SJAG_01274":null,"SJAG_01401":null,"SJAG_01456":null,"SJAG_01581":null,"SJAG_01587":null,"SJAG_01716":null,"SJAG_01799":null,"SJAG_02057":null,"SJAG_02183":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02404":null,"SJAG_02441":null,"SJAG_02785":null,"SJAG_03048":null,"SJAG_03061":null,"SJAG_03160":null,"SJAG_03206":null,"SJAG_03421":null,"SJAG_03501":null,"SJAG_03525":null,"SJAG_03591":null,"SJAG_03602":null,"SJAG_03618":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_03789":null,"SJAG_03802":null,"SJAG_03931":null,"SJAG_03967":null,"SJAG_04140":null,"SJAG_04232":null,"SJAG_04280":null,"SJAG_04312":null,"SJAG_04368":null,"SJAG_04420":null,"SJAG_04486":null,"SJAG_04502":null,"SJAG_04614":null,"SJAG_05017":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein kinase complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902911","terms_by_termid":{"GO:0000307":null,"GO:0005675":null,"GO:0005952":null,"GO:0005956":null,"GO:0009365":null,"GO:0019908":null,"GO:0031431":null,"GO:0031588":null,"GO:0070691":null,"GO:0070692":null,"GO:0070985":null,"GO:0090730":null,"GO:0110115":null,"GO:1990316":null}}


id: GO:1901078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of relaxation of muscle.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of relaxation of muscle","termid":"GO:1901077"},{"relation_name":"negatively_regulates","term_name":"relaxation of muscle","termid":"GO:0090075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of relaxation of muscle","synonyms":[{"name":"down regulation of relaxation of muscle","type":"exact"},{"name":"down-regulation of relaxation of muscle","type":"exact"},{"name":"downregulation of relaxation of muscle","type":"exact"},{"name":"inhibition of relaxation of muscle","type":"narrow"}],"termid":"GO:1901078"}


id: PBO:0033827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex subunit Psm1/Smc1","termid":"PBO:0033827"}


id: GO:0106319
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (4R)-limonene + NADH + H+ + O2 = NAD+ + H2O + (4R)-limonene-1,2-epoxide.","definition_xrefs":["RHEA:26093"],"gene_count":0,"genotype_count":0,"name":"obsolete (R)-limonene 1,2-monooxygenase NADH activity (obsolete GO:0106319)","termid":"GO:0106319"}


id: GO:0070831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a basement membrane, a part of the extracellular region that consists of a thin layer of dense material found in various animal tissues interposed between the cells and the adjacent connective tissue.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basement membrane organization","termid":"GO:0071711"},{"relation_name":"is_a","term_name":"extracellular matrix assembly","termid":"GO:0085029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"basement membrane assembly","termid":"GO:0070831"}


id: PBO:0000050
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally repressed by Chp1","termid":"PBO:0000050"}


id: GO:0120136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + dUMP = ADP + dUDP.","definition_xrefs":["PMID:3010881","RHEA:30655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UMP/dUMP kinase activity","termid":"GO:0009041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"dUMP kinase activity","synonyms":[{"name":"ATP:dUMP phosphotransferase activity","type":"exact"},{"name":"dUMP-kinase activity","type":"exact"},{"name":"deoxyuridine monophosphate kinase activity","type":"exact"}],"termid":"GO:0120136"}


id: PBO:0072619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial spoke head 3","termid":"PBO:0072619"}


id: GO:0099628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which diffusing neurotransmitter receptor becomes trapped in region of the plasma membrane.","definition_xrefs":["PMID:18832033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor diffusion trapping","termid":"GO:0098953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"neurotransmitter receptor diffusion trapping","termid":"GO:0099628"}


id: PBO:0053139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase A like 6A","termid":"PBO:0053139"}


id: GO:0070012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a peptide bond in an oligopeptide, i.e. a molecule containing a small number (2 to 20) of amino acid residues connected by peptide bonds.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase activity","termid":"GO:0004175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"}],"interesting_parent_ids":["GO:0008233","GO:0003824","GO:0016787","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"oligopeptidase activity","termid":"GO:0070012"}


id: GO:1903573
data:
  {"annotated_genes":["SJAG_02244"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95926],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904293"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of a response to endoplasmic reticulum stress.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:PARL","PMID:11381086","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of response to endoplasmic reticulum stress","termid":"GO:1905897"},{"relation_name":"negatively_regulates","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02244":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of response to endoplasmic reticulum stress","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of ER stress response","type":"exact"},{"name":"down regulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"down regulation of response to ER stress","type":"exact"},{"name":"down regulation of response to endoplasmic reticulum stress","type":"exact"},{"name":"down-regulation of ER stress response","type":"exact"},{"name":"down-regulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"down-regulation of response to ER stress","type":"exact"},{"name":"down-regulation of response to endoplasmic reticulum stress","type":"exact"},{"name":"downregulation of ER stress response","type":"exact"},{"name":"downregulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"downregulation of response to ER stress","type":"exact"},{"name":"downregulation of response to endoplasmic reticulum stress","type":"exact"},{"name":"inhibition of ER stress response","type":"narrow"},{"name":"inhibition of cellular response to endoplasmic reticulum stress","type":"narrow"},{"name":"inhibition of response to ER stress","type":"narrow"},{"name":"inhibition of response to endoplasmic reticulum stress","type":"narrow"},{"name":"negative regulation of ER stress response","type":"exact"},{"name":"negative regulation of cellular response to endoplasmic reticulum stress","type":"exact"},{"name":"negative regulation of response to ER stress","type":"exact"}],"termid":"GO:1903573","terms_by_termid":{"GO:1904293":null}}


id: GO:0033684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of luteinizing hormone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gonadotropin secretion","termid":"GO:0032276"},{"relation_name":"regulates","term_name":"luteinizing hormone secretion","termid":"GO:0032275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of luteinizing hormone secretion","termid":"GO:0033684"}


id: PBO:0074169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member G6","termid":"PBO:0074169"}


id: PBO:0087112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosome-associated chaperone; zuotin functions in ribosome biogenesis and as a chaperone for nascent polypeptide chains in partnership with Ssz1p and SSb1/2; contains a DnaJ domain and functions as a J-protein partner for Ssb1p and Ssb2p; human gene DNAJC2 can partially complement yeast zuo1 null mutant","termid":"PBO:0087112"}


id: PATO:0000907
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000907 f2 fertile (obsolete PATO:0000907)","termid":"PATO:0000907"}


id: PBO:0069145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 396, pseudogene","termid":"PBO:0069145"}


id: PBO:0090811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatA N-acetyltransferase complex catalytic subunit Naa10","termid":"PBO:0090811"}


id: PBO:0080460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and transmembrane domain containing 4","termid":"PBO:0080460"}


id: PBO:0111922
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vezatin family","termid":"PBO:0111922"}


id: MOD:00410
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(N-isopropylcarboxamidomethyl)-L-cysteine.","definition_xrefs":["OMSSA:84","PubMed:8465942","PubMed:11465505","Unimod:17#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-(N-isopropylcarboxamidomethyl)-L-cysteine","synonyms":[{"name":"N-isopropylcarboxamidomethyl","type":"related"},{"name":"NIPCAM","type":"related"},{"name":"nipcam","type":"exact"}],"termid":"MOD:00410"}


id: GO:0071785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organization process that preserves the endoplasmic reticulum (ER) cisternal network in a stable functional or structural state. The ER cisternal network is the ER part that comprises the membranes with low curvature in cross-section.","definition_xrefs":["GOC:mah","PMID:20434336","PMID:16469703"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component maintenance","termid":"GO:0043954"},{"relation_name":"is_a","term_name":"endoplasmic reticulum cisternal network organization","termid":"GO:0071783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum cisternal network maintenance","synonyms":[{"name":"ER cisternal network maintenance","type":"exact"}],"termid":"GO:0071785"}


id: PBO:0004043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L35a (predicted)","termid":"PBO:0004043"}


id: PBO:0049727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 8","termid":"PBO:0049727"}


id: PBO:0089485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-DNA covalent cross-linking repair","termid":"PBO:0089485"}


id: PR:O94260
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nxt3 gene.","definition_xrefs":["UniProtKB:O94260","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G3BP-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.11","synonyms":[{"name":"Spom972h-nxt3","type":"exact"}],"termid":"PR:O94260"}


id: PBO:0041143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 like 4 pseudogene 2","termid":"PBO:0041143"}


id: RO:0002179
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between an collecting structure and another structure, where the collecting structure acts as a conduit channeling fluid, substance or energy away from the other structure.","direct_ancestors":[{"relation_name":"is_a","term_name":"connected_to","termid":"RO:0002170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drains","termid":"RO:0002179"}


id: PBO:0047674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fli-1 proto-oncogene, ETS transcription factor","termid":"PBO:0047674"}


id: PBO:0066573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rh family C glycoprotein","termid":"PBO:0066573"}


id: PBO:0004318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mam33 family protein (predicted)","termid":"PBO:0004318"}


id: PBO:0084526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the DRG family of GTP-binding proteins; associates with translating ribosomes; interacts with Tma46p, Ygr250cp, Gir2p and Yap1p via two-hybrid","termid":"PBO:0084526"}


id: GO:0052885
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + all-trans-retinyl ester = 11-cis-retinol + fatty acid.","definition_xrefs":["RHEA:31771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity","secondary_identifiers":["KEGG_REACTION:R08388","MetaCyc:RXN-12550","EC:3.1.1.64"],"synonyms":[{"name":"all-trans-retinol isomerase:hydrolase activity","type":"broad"},{"name":"all-trans-retinyl ester acylhydrolase, 11-cis retinol forming activity","type":"related"},{"name":"all-trans-retinylester 11-cis isomerohydrolase activity","type":"related"},{"name":"retinoid isomerohydrolase activity","type":"broad"},{"name":"retinol isomerase activity","type":"broad"}],"termid":"GO:0052885"}


id: GO:0015708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of silicates from outside of a cell, across the plasma membrane and into the cytosol. Silicates are the salts of silicic acids, and are usually composed of silicon and oxygen (Si[x]O[y]), one or more metals, and possibly hydrogen. Types of silicate include unisilicates, metasilicates and hydrous silicates.","definition_xrefs":["PMID:16572174","GOC:krc","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion import across plasma membrane","termid":"GO:0098658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"silicic acid import across plasma membrane","secondary_identifiers":["GO:1902067","GO:0051207"],"synonyms":[{"name":"silicate transport","type":"broad"},{"name":"silicic acid import","type":"related"},{"name":"silicic acid transport","type":"exact"},{"name":"silicon uptake","type":"related"}],"termid":"GO:0015708"}


id: PBO:0069937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1230, pseudogene","termid":"PBO:0069937"}


id: GO:0102412
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate(3-) = valerena-4,7(11)-diene + diphosphoric acid.","definition_xrefs":["GOC:pz","EC:4.2.3.139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"valerena-4,7(11)-diene synthase activity","secondary_identifiers":["RHEA:34467","MetaCyc:RXN-13769"],"termid":"GO:0102412"}


id: GO:1900462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of pseudohyphal growth by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:12024012","PMID:9811878","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of pseudohyphal growth by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900462)","termid":"GO:1900462"}


id: GO:0140704
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 3',2' cyclic GMP-AMP (cGAMP) nucleotide, a cyclic purine dinucleotide that consists of AMP and GMP units cyclized via 3',5' and 2',5' linkages.","definition_xrefs":["PMID:34261127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"3',2'-cyclic GMP-AMP binding","synonyms":[{"name":"3',2' cyclic-GMP-AMP binding","type":"exact"},{"name":"3',2'-cGAMP binding","type":"exact"},{"name":"3',2'-cyclic GAMP binding","type":"exact"}],"termid":"GO:0140704"}


id: PBO:0044554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual adaptor of phosphotyrosine and 3-phosphoinositides 1","termid":"PBO:0044554"}


id: FYPO:0005951
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal in chromatin regions where RNA polymerase II actively transcribes genes. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PomBase:mah","PMID:28218250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased nucleosome occupancy in euchromatin","termid":"FYPO:0005516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased nucleosome occupancy at highly transcribed RNA polymerase II genes","synonyms":[{"name":"decreased nucleosome occupancy at highly transcribed RNA polymerase II genes during mitotic cell cycle","type":"related"},{"name":"decreased nucleosome occupancy at highly transcribed RNA polymerase II genes during vegetative growth","type":"exact"},{"name":"reduced nucleosome occupancy at highly transcribed RNA polymerase II genes","type":"exact"}],"termid":"FYPO:0005951"}


id: GO:0003163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sinoatrial (SA) node over time, from its formation to the mature structure. The SA node is part of the cardiac conduction system that controls the timing of heart muscle contraction. It relays electrical signals to the AV node.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial cardiac muscle tissue development","termid":"GO:0003228"},{"relation_name":"part_of","term_name":"cardiac conduction system development","termid":"GO:0003161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sinoatrial node development","synonyms":[{"name":"SA node development","type":"exact"},{"name":"SAN development","type":"exact"},{"name":"sinus node development","type":"narrow"}],"termid":"GO:0003163"}


id: GO:0021694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the cerebellar Purkinje cell layer. This process pertains to the initial formation of a structure from unspecified parts. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells.","definition_xrefs":["GO_REF:0000021","GOC:dph","ISBN:0838580343","GOC:jid","GOC:cls","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"cerebellar Purkinje cell layer morphogenesis","termid":"GO:0021692"},{"relation_name":"part_of","term_name":"cerebellar cortex formation","termid":"GO:0021697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Purkinje cell layer formation","termid":"GO:0021694"}


id: GO:0085005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released by the other (symbiont) organism via invasive hyphae. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via secreted substance released from invasive hyphae (obsolete GO:0085005)","termid":"GO:0085005"}


id: GO:0009559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the two uncellularized polar nuclei cellularize, fuse and acquire the specialized features of a mononucleate diploid central cell.","definition_xrefs":["GOC:jid","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"megagametogenesis","termid":"GO:0009561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryo sac central cell differentiation","synonyms":[{"name":"embryo sac endosperm mother cell differentiation","type":"exact"},{"name":"female gametophyte central cell differentiation","type":"exact"}],"termid":"GO:0009559"}


id: FYPO:0005904
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of protein exchange in the actomyosin contractile ring is normal (i.e. indistinguishable from wild type). Normally, proteins including actin and myosin are turned over between the contractile ring and elsewhere in the cytoplasm; exchange is faster during than before ring constriction.","definition_xrefs":["PMID:19570908","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cytoskeleton organization","termid":"FYPO:0001366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal rate of protein exchange in actomyosin contractile ring","synonyms":[{"name":"normal rate of protein exchange in actomyosin contractile ring during mitotic cell cycle","type":"related"},{"name":"normal rate of protein exchange in actomyosin contractile ring during vegetative growth","type":"exact"}],"termid":"FYPO:0005904"}


id: PBO:0082725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the ribosome quality control complex (RQC); RQC (Rqc1p-Rkr1p-Rqc2p-Cdc48p-Npl4p-Ufd1p) is a ribosome-bound complex required for the degradation of polypeptides arising from stalled translation; required along with Rkr1p for recruitment of the Cdc48p-Npl4p-Ufd1p AAA ATPase complex to the RQC","termid":"PBO:0082725"}


id: GO:1903070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of ER-associated ubiquitin-dependent protein catabolic process.","definition_xrefs":["GO_REF:0000058","GOC:rph","GOC:TermGenie","PMID:17872946"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of ER-associated ubiquitin-dependent protein catabolic process (obsolete GO:1903070)","termid":"GO:1903070"}


id: MOD:00224
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to 1-chondroitin sulfate-L-aspartic acid ester","definition_xrefs":["RESID:AA0219","PubMed:1898736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-chondroitin sulfate-L-aspartic acid ester","synonyms":[{"name":"1-aspartic acid ester with 6-chondroitin 4-sulfate","type":"exact"},{"name":"1-chondroitin sulfate-L-aspartic acid ester","type":"exact"},{"name":"MOD_RES Aspartate 1-(chondroitin 4-sulfate)-ester","type":"exact"},{"name":"poly[beta-1,4-D-glucopyranuronosyl-beta-1,3-(2-acetamido-2-deoxy-4-sulfate D-galactosyl)]beta-1,4-D-glucopyranuronosyl-beta-1,3-(2-acetamido-2-deoxy-4-sulfate-6-(1-L-aspartyl)-D-galactose)","type":"exact"},{"name":"protein-glycosaminoglycan-protein cross-link","type":"exact"}],"termid":"MOD:00224"}


id: PBO:0029404
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromosome_morphology","termid":"PBO:0029404"}


id: GO:0075135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a virus interferes with, inhibits or disrupts a calcium or calmodulin-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host calcium or calmodulin-mediated signal transduction","termid":"GO:0075133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host calcium or calmodulin-mediated signal transduction","synonyms":[{"name":"disruption of host calcium or calmodulin-mediated signal transduction","type":"exact"},{"name":"negative regulation by symbiont of host Ca++ or calmodulin-mediated signal transduction","type":"exact"},{"name":"negative regulation by symbiont of host calcium or calmodulin-mediated signal transduction","type":"exact"},{"name":"suppression by symbiont of host calcium or calmodulin-mediated signal transduction","type":"exact"}],"termid":"GO:0075135"}


id: PBO:0043633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI coat complex subunit epsilon","termid":"PBO:0043633"}


id: GO:0009140
data:
  {"annotated_genes":["SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyrimidine nucleoside diphosphate, a compound consisting of a pyrimidine base linked to a ribose or deoxyribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate catabolic process","termid":"GO:0009134"},{"relation_name":"is_a","term_name":"pyrimidine nucleoside diphosphate metabolic process","termid":"GO:0009138"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine nucleoside diphosphate catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine nucleoside diphosphate breakdown","type":"exact"},{"name":"pyrimidine nucleoside diphosphate catabolism","type":"exact"},{"name":"pyrimidine nucleoside diphosphate degradation","type":"exact"}],"termid":"GO:0009140","terms_by_termid":{"GO:0006256":null}}


id: PBO:0005880
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intronic ORF","termid":"PBO:0005880"}


id: PBO:0054531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1931","termid":"PBO:0054531"}


id: PBO:0047184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 201 member B","termid":"PBO:0047184"}


id: GO:0047669
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose + 1,4-alpha-D-glucosyl(n) = D-fructose + 1,4-alpha-D-glucosyl(n+1).","definition_xrefs":["EC:2.4.1.4","MetaCyc:AMYLOSUCRASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"amylosucrase activity","secondary_identifiers":["RHEA:24572"],"synonyms":[{"name":"sucrose-1,4-alpha-glucan glucosyltransferase activity","type":"related"},{"name":"sucrose-glucan glucosyltransferase activity","type":"related"},{"name":"sucrose:1,4-alpha-D-glucan 4-alpha-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0047669"}


id: GO:0070223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A sulfide oxidation process that proceeds via the reaction catalyzed by sulfur dioxygenase.","definition_xrefs":["MetaCyc:PWY-5285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfide oxidation","termid":"GO:0019418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"sulfide oxidation, using sulfur dioxygenase","synonyms":[{"name":"sulphide oxidation, using sulfur dioxygenase","type":"exact"}],"termid":"GO:0070223"}


id: PBO:0064410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNMA family member 6A","termid":"PBO:0064410"}


id: PBO:0074723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 80C","termid":"PBO:0074723"}


id: GO:0034390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a smooth muscle cell. Smooth muscle consists of non-striated, elongated, spindle-shaped cell found lining the digestive tract, uterus, and blood vessels.","definition_xrefs":["CL:0000192","GOC:mah","GOC:mtg_apoptosis","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell apoptotic process","termid":"GO:0010657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle cell apoptotic process","synonyms":[{"name":"SMC apoptosis","type":"exact"},{"name":"apoptosis of smooth muscle cells","type":"exact"},{"name":"programmed cell death of smooth muscle cells by apoptosis","type":"exact"},{"name":"programmed cell death, smooth muscle cells","type":"exact"},{"name":"smooth muscle cell apoptosis","type":"narrow"},{"name":"smooth muscle cell programmed cell death by apoptosis","type":"exact"}],"termid":"GO:0034390"}


id: PBO:0064854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 14B pseudogene 5","termid":"PBO:0064854"}


id: GO:0000145
data:
  {"annotated_genes":["SJAG_01925","SJAG_04044","SJAG_02753","SJAG_04960","SJAG_02166","SJAG_03864","SJAG_03938","SJAG_03357","SJAG_02320"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84687,86802,95605,97975,109933,110220,111712,113797,114895],"is_not":false,"summary":null,"term":"GO:0000145"}]},"cv_name":"cellular_component","definition":"A protein complex peripherally associated with the plasma membrane that determines where vesicles dock and fuse. At least eight complex components are conserved between yeast and mammals.","definition_xrefs":["PMID:9700152","GOC:cilia","PMID:27243008","PMID:15292201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle tethering complex","termid":"GO:0099023"},{"relation_name":"part_of","term_name":"cell cortex","termid":"GO:0005938"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01925":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_02753":null,"SJAG_03357":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_04044":null,"SJAG_04960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737","GO:0005938"],"is_obsolete":false,"name":"exocyst","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Exocyst"],"synonyms":[{"name":"Sec6/8 complex","type":"exact"},{"name":"exocyst complex","type":"exact"}],"termid":"GO:0000145","terms_by_termid":{"GO:0000145":null}}


id: PBO:0086795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YBL044W is not an essential protein","termid":"PBO:0086795"}


id: GO:0090255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to imaginal disc-derived wing morphogenesis.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in imaginal disc-derived wing morphogenesis","termid":"GO:0090255"}


id: PBO:0005829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf13 (predicted)","termid":"PBO:0005829"}


id: GO:0002187
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An octomeric protein complex having creatine kinase activity.","definition_xrefs":["PMID:16236486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"creatine kinase complex","termid":"GO:0002185"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005739","GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"mitochondrial creatine kinase complex","termid":"GO:0002187"}


id: PBO:0055750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA SMARCA2 (BRM) associated","termid":"PBO:0055750"}


id: PBO:0018038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pantothenate transmembrane transporter Liz1","termid":"PBO:0018038"}


id: PBO:0030896
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transport_phenotype_during_vegetative_growth","termid":"PBO:0030896"}


id: GO:2000187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphate transmembrane transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of inorganic anion transmembrane transport","termid":"GO:1903797"},{"relation_name":"is_a","term_name":"regulation of phosphate transmembrane transport","termid":"GO:2000185"},{"relation_name":"positively_regulates","term_name":"phosphate ion transmembrane transport","termid":"GO:0035435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphate transmembrane transport","synonyms":[{"name":"positive regulation of phosphate membrane transport","type":"exact"}],"termid":"GO:2000187"}


id: PBO:0005155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress response protein Bis1","termid":"PBO:0005155"}


id: PBO:0005073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase delta subunit Swp1 (predicted)","termid":"PBO:0005073"}


id: PBO:0036079
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transport_along_microtubule_during_vegetative_growth","termid":"PBO:0036079"}


id: PBO:0065827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB6B, member RAS oncogene family","termid":"PBO:0065827"}


id: PBO:0050126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 36","termid":"PBO:0050126"}


id: GO:0052104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont activates systemic acquired resistance in the host organism; systemic acquired resistance is a salicylic acid-mediated response that confers broad spectrum systemic resistance. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host systemic acquired resistance (obsolete GO:0052104)","synonyms":[{"name":"activation by organism of SAR in host","type":"exact"},{"name":"activation by organism of systemic acquired resistance in host","type":"exact"},{"name":"induction by organism of SAR in host","type":"exact"},{"name":"induction by organism of systemic acquired resistance in other organism involved in symbiotic interaction","type":"broad"},{"name":"induction by symbiont of systemic acquired resistance in host","type":"exact"},{"name":"positive regulation by organism of systemic acquired resistance in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of host systemic acquired resistance","type":"related"},{"name":"positive regulation by symbiont of systemic acquired resistance in host","type":"related"},{"name":"stimulation by symbiont of systemic acquired resistance in host","type":"related"},{"name":"up regulation by symbiont of systemic acquired resistance in host","type":"related"},{"name":"up-regulation by symbiont of systemic acquired resistance in host","type":"related"},{"name":"upregulation by symbiont of systemic acquired resistance in host","type":"related"}],"termid":"GO:0052104"}


id: GO:0034411
data:
  {"annotated_genes":["SJAG_04483","SJAG_03705","SJAG_04668","SJAG_03587","SJAG_01835","SJAG_01787","SJAG_00218","SJAG_00876","SJAG_05285","SJAG_02222","SJAG_01290","SJAG_01288","SJAG_00610","SJAG_04462","SJAG_04771","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034413"},{"annotations":[102147,87632,105353,84137,111889,103831,87643,109230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071970"},{"annotations":[83591,88467],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140748"},{"annotations":[88452,113979,86828,101391,98911,88469],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds, found in the walls of cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(1->3)-beta-D-glucan biosynthetic process","termid":"GO:0006075"},{"relation_name":"is_a","term_name":"cell wall (1->3)-beta-D-glucan metabolic process","termid":"GO:0034407"},{"relation_name":"is_a","term_name":"cell wall beta-glucan biosynthetic process","termid":"GO:0034410"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00218":null,"SJAG_00610":null,"SJAG_00876":null,"SJAG_01288":null,"SJAG_01290":null,"SJAG_01787":null,"SJAG_01835":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04483":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554","GO:0005975"],"is_obsolete":false,"name":"cell wall (1->3)-beta-D-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell wall 1,3-beta-D-glucan biosynthetic process","type":"broad"},{"name":"cell wall 1,3-beta-glucan anabolism","type":"exact"},{"name":"cell wall 1,3-beta-glucan biosynthesis","type":"exact"},{"name":"cell wall 1,3-beta-glucan biosynthetic process","type":"broad"},{"name":"cell wall 1,3-beta-glucan formation","type":"exact"},{"name":"cell wall 1,3-beta-glucan synthesis","type":"exact"},{"name":"cell wall beta-1,3-glucan anabolism","type":"exact"},{"name":"cell wall beta-1,3-glucan biosynthesis","type":"exact"},{"name":"cell wall beta-1,3-glucan biosynthetic process","type":"exact"},{"name":"cell wall beta-1,3-glucan formation","type":"exact"},{"name":"cell wall beta-1,3-glucan synthesis","type":"exact"}],"termid":"GO:0034411","terms_by_termid":{"GO:0034413":null,"GO:0071970":null,"GO:0090334":null,"GO:0140748":null}}


id: PBO:0053606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 639","termid":"PBO:0053606"}


id: PBO:0029743
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spheroid_cell","termid":"PBO:0029743"}


id: GO:0033346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutamate, via the intermediate 2-oxosuccinamate.","definition_xrefs":["MetaCyc:PWY-4002","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asparagine catabolic process","termid":"GO:0006530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044248"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044248","GO:0044281"],"is_obsolete":false,"name":"asparagine catabolic process via 2-oxosuccinamate","termid":"GO:0033346"}


id: PBO:0108981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated microtubule inner protein 5","termid":"PBO:0108981"}


id: PBO:0054876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2290","termid":"PBO:0054876"}


id: GO:0018627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-aminobenzenesulfonate + 2 H+ + NADH + O2 = 2,3-dihydroxybenzenesulfonate + NAD+ + NH4. 2,3-dihydroxybenzenesulfonate is also known as 3-sulfocatechol.","definition_xrefs":["RHEA:23468","EC:1.14.12.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2-aminobenzenesulfonate 2,3-dioxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0218","MetaCyc:2ASDOSALCAL-RXN","GO:0018605","KEGG_REACTION:R05156"],"synonyms":[{"name":"2-aminobenzenesulfonate dioxygenase activity","type":"exact"},{"name":"2-aminobenzenesulfonate,NADH:oxygen oxidoreductase (2,3-hydroxylating, ammonia-forming)","type":"related"},{"name":"2-aminobenzenesulphonate 2,3-dioxygenase activity","type":"exact"},{"name":"2-aminobenzenesulphonate dioxygenase activity","type":"exact"},{"name":"2-aminosulfobenzene 2,3-dioxygenase activity","type":"related"}],"termid":"GO:0018627"}


id: GO:1901338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to catecholamine.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cyclic compound binding","termid":"GO:0097159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"catecholamine binding","termid":"GO:1901338"}


id: GO:0014064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of serotonin.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of serotonin secretion","termid":"GO:0014062"},{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transport","termid":"GO:0043270"},{"relation_name":"is_a","term_name":"positive regulation of secretion by cell","termid":"GO:1903532"},{"relation_name":"positively_regulates","term_name":"serotonin secretion","termid":"GO:0001820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of serotonin secretion","synonyms":[{"name":"activation of serotonin secretion","type":"narrow"},{"name":"positive regulation of serotonin release","type":"related"},{"name":"stimulation of serotonin secretion","type":"narrow"},{"name":"up regulation of serotonin secretion","type":"exact"},{"name":"up-regulation of serotonin secretion","type":"exact"},{"name":"upregulation of serotonin secretion","type":"exact"}],"termid":"GO:0014064"}


id: PATO:0001944
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of yellow and orange hue.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orange","termid":"PATO:0000953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yellow orange","termid":"PATO:0001944"}


id: PATO:0001532
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color pattern inhering in a bearer by virtue of the bearer's having one hue.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color pattern","termid":"PATO:0000019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mono-colored","synonyms":[{"name":"evenly colored","type":"exact"},{"name":"homogeneously colored","type":"exact"},{"name":"homogenously pigmented","type":"related"},{"name":"uniformly colored","type":"exact"}],"termid":"PATO:0001532"}


id: PBO:0053693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 891","termid":"PBO:0053693"}


id: PBO:0041356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C4B antisense RNA 1","termid":"PBO:0041356"}


id: PBO:0089000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Ltv1","termid":"PBO:0089000"}


id: PR:000050527
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the hhf2 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4, hhf2 gene translation product (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC8D2.03c","termid":"PR:000050527"}


id: GO:0062156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the ATP-dependent diffusion of a potassium ion across the mitochondrial inner membrane.","definition_xrefs":["PMID:31435016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activity","termid":"GO:0005267"},{"relation_name":"is_a","term_name":"ATP-gated ion channel activity","termid":"GO:0035381"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"mitochondrial ATP-gated potassium channel activity","synonyms":[{"name":"mitoK-ATP activity","type":"exact"},{"name":"mitochondrial potassium channel activity","type":"exact"}],"termid":"GO:0062156"}


id: PBO:0091512
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"although the specificity is different Imt1/A4GALT are in equivalent pathway postitions","termid":"PBO:0091512"}


id: PBO:0091671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific Smp foci lncRNA Sme2, long isoform","termid":"PBO:0091671"}


id: PBO:0047764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FosB proto-oncogene, AP-1 transcription factor subunit","termid":"PBO:0047764"}


id: PBO:0057081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR181A2 host gene","termid":"PBO:0057081"}


id: GO:0085007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released by the other (symbiont) organism via the rhoptry, a large, club-shaped secretory organelle that forms part of the apical complex of an apicomplexan parasite. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via secreted substance released from rhoptry (obsolete GO:0085007)","termid":"GO:0085007"}


id: PBO:0070145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 59 pseudogene","termid":"PBO:0070145"}


id: PR:O14244
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6F6.13c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C6F6.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.13c","synonyms":[{"name":"Spom972h-SPAC6F6.13c","type":"exact"}],"termid":"PR:O14244"}


id: PBO:0056863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MHC class I polypeptide-related sequence A","termid":"PBO:0056863"}


id: SO:0002224
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that codes for a 2A self-cleaving polypeptide region, which is a region that can result in a break in the peptide sequence at its terminal G-P junction.","definition_xrefs":["PMID:22301656","PMID:28526819"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"2A_self_cleaving_peptide_region","synonyms":[{"name":"2A polypeptide region","type":"related"},{"name":"2A self-cleaving polypeptide region","type":"related"}],"termid":"SO:0002224"}


id: GO:0016536
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Modulation of the activity of cyclin-dependent protein kinase 5 activator.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclin-dependent protein kinase 5 activator regulator activity (obsolete GO:0016536)","synonyms":[{"name":"cyclin-dependent protein kinase 5 activator regulator activity","type":"exact"},{"name":"cyclin-dependent protein kinase 5 activator, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0016536"}


id: GO:0002156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of thyroid hormone mediated signaling pathway.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of thyroid hormone receptor signaling pathway","termid":"GO:0002155"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"thyroid hormone receptor signaling pathway","termid":"GO:0002154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of thyroid hormone receptor signaling pathway","synonyms":[{"name":"negative regulation of thyroid hormone mediated signaling pathway","type":"exact"},{"name":"negative regulation of thyroid hormone mediated signalling pathway","type":"exact"}],"termid":"GO:0002156"}


id: PBO:0065005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 10","termid":"PBO:0065005"}


id: GO:0046979
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the TAP2 subunit of TAP (transporter associated with antigen processing) protein.","definition_xrefs":["PMID:11133832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TAP binding","termid":"GO:0046977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"TAP2 binding","termid":"GO:0046979"}


id: PBO:0050211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 28","termid":"PBO:0050211"}


id: PBO:0072894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol-C4-methyl oxidase pseudogene","termid":"PBO:0072894"}


id: PBO:0087493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of DNA primase; DNA primase is required for DNA synthesis and double-strand break repair","termid":"PBO:0087493"}


id: GO:0038043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-5 binding to its receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-5-mediated signaling pathway","synonyms":[{"name":"IL-5-mediated signaling pathway","type":"exact"},{"name":"interleukin-5-mediated signalling pathway","type":"exact"}],"termid":"GO:0038043"}


id: PBO:0091951
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human protein phosphatase B' delta","termid":"PBO:0091951"}


id: PBO:0002381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IPT/TIG ankyrin repeat containing transcription regulator of fatty acid biosynthesis (predicted)","termid":"PBO:0002381"}


id: GO:0052039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of the host cytoskeleton. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated disruption of host cellular anatomical entity","termid":"GO:0052008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host cytoskeleton","secondary_identifiers":["GO:0044054"],"synonyms":[{"name":"disruption by symbiont of host cytoskeleton","type":"related"},{"name":"modification by symbiont of host cytoskeleton","type":"related"},{"name":"perturbation by symbiont of host cytoskeleton","type":"exact"},{"name":"rounding by symbiont of host cells","type":"narrow"}],"termid":"GO:0052039"}


id: PR:Q9UUB7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swi5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUB7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type switching protein swi5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC409.03","synonyms":[{"name":"DNA repair protein swi5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-swi5","type":"exact"}],"termid":"PR:Q9UUB7"}


id: GO:0018712
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxy-5-oxohexanoyl-CoA + CoASH = 3-hydroxybutyryl-CoA + acetyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"3-hydroxybutyryl-CoA thiolase activity","secondary_identifiers":["MetaCyc:R7-RXN"],"termid":"GO:0018712"}


id: PBO:0084582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YCL060C was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YCL061C","termid":"PBO:0084582"}


id: GO:0004722
data:
  {"annotated_genes":["SJAG_03126","SJAG_03310","SJAG_03631","SJAG_03482","SJAG_03893","SJAG_02854","SJAG_02203","SJAG_00082","SJAG_02433","SJAG_01187","SJAG_04426","SJAG_02389","SJAG_01672","SJAG_01906","SJAG_03185","SJAG_01790","SJAG_01286","SJAG_00600","SJAG_00823","SJAG_03624","SJAG_02536"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[85254,86070,89513,92037,93259,93688,94597,96338,100559,103463,105785,106134,108026,110145,111553,112668,113158],"is_not":false,"summary":null,"term":"GO:0004722"},{"annotations":[83928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004741"},{"annotations":[109433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004723"},{"annotations":[109434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033192"},{"annotations":[113157,92036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990439"},{"annotations":[89701,87654,93260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008420"},{"annotations":[91898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180007"},{"annotations":[108027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180005"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00600":null,"SJAG_00823":null,"SJAG_01187":null,"SJAG_01286":null,"SJAG_01672":null,"SJAG_01790":null,"SJAG_01906":null,"SJAG_02203":null,"SJAG_02389":null,"SJAG_02433":null,"SJAG_02536":null,"SJAG_02854":null,"SJAG_03126":null,"SJAG_03185":null,"SJAG_03310":null,"SJAG_03482":null,"SJAG_03624":null,"SJAG_03631":null,"SJAG_03893":null,"SJAG_04426":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0004721","GO:0016788","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"protein serine/threonine phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5693153","GO:0030357","EC:3.1.3.16","Reactome:R-HSA-9658445","Reactome:R-HSA-9831948","Reactome:R-HSA-9619430","Reactome:R-HSA-4088141","Reactome:R-HSA-5694421","Reactome:R-HSA-9853385","Reactome:R-HSA-9861725","GO:0030358","GO:0030361","Reactome:R-HSA-209055","Reactome:R-HSA-201790","Reactome:R-HSA-8948139","Reactome:R-HSA-5672961","Reactome:R-HSA-1638821","GO:0000158","Reactome:R-HSA-5675433","Reactome:R-HSA-5692754","Reactome:R-HSA-74948","Reactome:R-HSA-5675431","Reactome:R-HSA-9619467","GO:0015071","GO:0106306","Reactome:R-HSA-9619449","Reactome:R-HSA-6792863","Reactome:R-HSA-9660536","Reactome:R-HSA-9686524","Reactome:R-HSA-5687758","Reactome:R-HSA-429730","GO:0008598","Reactome:R-HSA-2187401","Reactome:R-HSA-201787","Reactome:R-HSA-3601585","Reactome:R-HSA-9660538","Reactome:R-HSA-6811504","GO:0000163","GO:0030360","GO:0106307","GO:0004724","MetaCyc:3.1.3.16-RXN","Reactome:R-HSA-163689","Reactome:R-HSA-163750","Reactome:R-HSA-199425","Reactome:R-HSA-2995388","Reactome:R-HSA-3002811","Reactome:R-HSA-5683405","Reactome:R-HSA-380949","Reactome:R-HSA-4419948","Reactome:R-HSA-5679206","GO:0008600","Reactome:R-HSA-163568","Reactome:R-HSA-1295632","Reactome:R-HSA-199959","Reactome:R-HSA-5672957"],"synonyms":[{"name":"magnesium-dependent protein serine/threonine phosphatase activity","type":"related"},{"name":"phosphatase I","type":"narrow"},{"name":"phosphatase II","type":"narrow"},{"name":"phosphatase III","type":"narrow"},{"name":"protein phosphatase type 1 activity","type":"narrow"},{"name":"protein phosphatase type 2A activity","type":"narrow"},{"name":"protein phosphatase type 2B activity","type":"narrow"},{"name":"protein phosphatase type 2C activity","type":"narrow"},{"name":"protein phosphatase-1","type":"narrow"},{"name":"protein phosphatase-2A","type":"narrow"},{"name":"protein phosphatase-2B","type":"narrow"},{"name":"protein phosphatase-2C","type":"narrow"},{"name":"protein serine phosphatase activity","type":"narrow"},{"name":"protein threonine phosphatase activity","type":"narrow"},{"name":"serine/threonine specific protein phosphatase activity","type":"exact"}],"termid":"GO:0004722","terms_by_termid":{"GO:0004722":null,"GO:0004723":null,"GO:0004741":null,"GO:0008420":null,"GO:0033192":null,"GO:0180005":null,"GO:0180007":null,"GO:1990439":null}}


id: PBO:0029941
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cone-shaped_colony_morphology","termid":"PBO:0029941"}


id: PBO:0033771
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_site-specific_DNA_replication_termination_at_RTS1_barrier","termid":"PBO:0033771"}


id: GO:0006229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dUTP, deoxyuridine (5'-)triphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside triphosphate biosynthetic process","termid":"GO:0009212"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide biosynthetic process","termid":"GO:0009221"},{"relation_name":"is_a","term_name":"dUTP metabolic process","termid":"GO:0046080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"dUTP biosynthetic process","synonyms":[{"name":"dUTP anabolism","type":"exact"},{"name":"dUTP biosynthesis","type":"exact"},{"name":"dUTP formation","type":"exact"},{"name":"dUTP synthesis","type":"exact"}],"termid":"GO:0006229"}


id: PR:Q9C1W5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import inner membrane translocase subunit Tim16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12388:SF0","OMA:SCHPO02627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.10","secondary_identifiers":["UniProtKB:Q9C1W5"],"synonyms":[{"name":"Spom972h-PAM16","type":"exact"},{"name":"presequence translocated-associated motor subunit pam16 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9C1W5"}


id: PBO:0048961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycoprotein VI platelet","termid":"PBO:0048961"}


id: PBO:0053219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galectin like","termid":"PBO:0053219"}


id: GO:0018645
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: propene + NADH + H+ + O2 = 1,2-epoxypropane + NAD+ + H2O.","definition_xrefs":["EC:1.14.13.69"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alkene monooxygenase activity","secondary_identifiers":["RHEA:11792","MetaCyc:1.14.13.69-RXN","UM-BBD_enzymeID:r0856","UM-BBD_enzymeID:r0857"],"synonyms":[{"name":"alkene epoxygenase activity","type":"related"},{"name":"alkene,NADH:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0018645"}


id: GO:0043027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of a cysteine-type endopeptidase involved in the apoptotic process.","definition_xrefs":["GOC:jl","PMID:14744432","Wikipedia:Caspase","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type endopeptidase regulator activity involved in apoptotic process","termid":"GO:0043028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"cysteine-type endopeptidase inhibitor activity involved in apoptotic process","synonyms":[{"name":"caspase inhibitor activity","type":"broad"}],"termid":"GO:0043027"}


id: PBO:0051728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrator complex subunit 1","termid":"PBO:0051728"}


id: PBO:0085965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overexpression suppresses the lethality caused by a rad53 null mutation","termid":"PBO:0085965"}


id: GO:0034859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: benzothiazole + 1/2 O2 = 2-hydroxybenzothiazole.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete benzothiazole monooxygenase activity (obsolete GO:0034859)","termid":"GO:0034859"}


id: GO:0009416
data:
  {"annotated_genes":["SJAG_02828","SJAG_02818","SJAG_00272","SJAG_00863","SJAG_04150","SJAG_01262","SJAG_02200","SJAG_04190","SJAG_00729","SJAG_02199","SJAG_00814","SJAG_02182","SJAG_02334","SJAG_01010","SJAG_00208","SJAG_05242","SJAG_01648","SJAG_02860","SJAG_04877","SJAG_05197","SJAG_03898"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009785"},{"annotations":[115606,115607],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071483"},{"annotations":[98892,91296,105163,100977],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904161"},{"annotations":[84080,91117,107483,89715,106880,108338,85641,93192,108893,91330,92079,100294,103036,90024,101986],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070914"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared, visible or ultraviolet light.","definition_xrefs":["GOC:go_curators","ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to radiation","termid":"GO:0009314"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00208":null,"SJAG_00272":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_01010":null,"SJAG_01262":null,"SJAG_01648":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02200":null,"SJAG_02334":null,"SJAG_02818":null,"SJAG_02828":null,"SJAG_02860":null,"SJAG_03898":null,"SJAG_04150":null,"SJAG_04190":null,"SJAG_04877":null,"SJAG_05197":null,"SJAG_05242":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to light stimulus","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"PMID:23873862":null},"termid":"GO:0009416","terms_by_termid":{"GO:0009785":null,"GO:0070914":null,"GO:0071483":null,"GO:1904161":null}}


id: GO:0046966
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear thyroid hormone receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor binding","termid":"GO:0016922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"nuclear thyroid hormone receptor binding","synonyms":[{"name":"ligand-dependent thyroid hormone receptor interactor activity","type":"narrow"},{"name":"thyroid hormone receptor binding","type":"broad"}],"termid":"GO:0046966"}


id: _global:involved_in_negative_regulation_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c involved in regulation of p if c is involved in some p' and p' negatively regulates some p","direct_ancestors":[{"relation_name":"is_a","term_name":"involved_in_regulation_of","termid":"_global:involved_in_regulation_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in_negative_regulation_of","secondary_identifiers":["RO:0002430"],"termid":"_global:involved_in_negative_regulation_of"}


id: PBO:0056802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 1","termid":"PBO:0056802"}


id: GO:0007285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The phase of growth and gene expression that male germ cells undergo as they enter the spermatocyte stage. The cells grow in volume and transcribe most of the gene products needed for the morphological events that follow meiosis.","definition_xrefs":["ISBN:0879694238","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"developmental cell growth","termid":"GO:0048588"},{"relation_name":"part_of","term_name":"spermatogenesis","termid":"GO:0007283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary spermatocyte growth","termid":"GO:0007285"}


id: GO:0050770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of axonogenesis, the generation of an axon, the long process of a neuron.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron projection development","termid":"GO:0010975"},{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"axonogenesis","termid":"GO:0007409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of axonogenesis","termid":"GO:0050770"}


id: PBO:0053688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 881","termid":"PBO:0053688"}


id: FYPO:0003175
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleotide-excision repair is decreased during a cellular response to ultraviolet light. Nucleotide-excision repair is a DNA repair process in which a small region of the strand surrounding the damage is removed as an oligonucleotide, and the resulting small gap is filled in by the sequential action of DNA polymerase and DNA ligase.","definition_xrefs":["PomBase:mah","GO:0006289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleotide-excision repair during vegetative growth","termid":"FYPO:0003173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000293","FYPO:0000298","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased nucleotide-excision repair during cellular response to UV","synonyms":[{"name":"decreased NER during cellular response to UV","type":"exact"},{"name":"decreased excision repair during cellular response to UV","type":"broad"},{"name":"decreased nucleotide-excision repair during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"decreased nucleotide-excision repair during cellular response to UV during vegetative growth","type":"exact"},{"name":"reduced nucleotide-excision repair during cellular response to UV","type":"exact"}],"termid":"FYPO:0003175"}


id: GO:1902239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator.","definition_xrefs":["GOC:mtg_apoptosis","PMID:16571598","GOC:krc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress","termid":"GO:1902219"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","termid":"GO:1902238"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:1902254"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","termid":"GO:1990127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","synonyms":[{"name":"down regulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","type":"exact"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to osmotic stress by p53 class mediator","type":"narrow"}],"termid":"GO:1902239"}


id: GO:2000980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of inner ear receptor cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mechanoreceptor differentiation","termid":"GO:0045631"},{"relation_name":"regulates","term_name":"inner ear receptor cell differentiation","termid":"GO:0060113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of inner ear receptor cell differentiation","synonyms":[{"name":"regulation of inner ear hair cell differentiation","type":"exact"}],"termid":"GO:2000980"}


id: PBO:0001627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Tlg2 (predicted)","termid":"PBO:0001627"}


id: PBO:0068487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 70, pseudogene","termid":"PBO:0068487"}


id: PBO:0051349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-38 (pseudogene)","termid":"PBO:0051349"}


id: PATO:0002412
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of yellow and brown hue and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"yellow brown","termid":"PATO:0002411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark yellow brown","termid":"PATO:0002412"}


id: PBO:0043051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHP1 pseudogene 1","termid":"PBO:0043051"}


id: PBO:0054883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2297","termid":"PBO:0054883"}


id: PBO:0057582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 887","termid":"PBO:0057582"}


id: PBO:0086607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; gene expression induced in response to ketoconazole; YPL272C is not an essential gene","termid":"PBO:0086607"}


id: PBO:0109659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing coactivator Pwi1","termid":"PBO:0109659"}


id: GO:0090523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H+ + 2 ferricytochrome b(5) = NADP+ + 2 ferrocytochrome b(5).","definition_xrefs":["GOC:tb","RHEA:64576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytochrome-b5 reductase activity, acting on NAD(P)H","termid":"GO:0004128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cytochrome-b5 reductase activity, acting on NADPH","synonyms":[{"name":"cytochrome-b5 reductase activity","type":"broad"}],"termid":"GO:0090523"}


id: GO:0086097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipase C-activating G protein-coupled receptor signaling pathway initiated by angiotensin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"},{"relation_name":"is_a","term_name":"angiotensin-activated signaling pathway","termid":"GO:0038166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"phospholipase C-activating angiotensin-activated signaling pathway","synonyms":[{"name":"Gq-coupled angiotensin receptor signaling pathway","type":"exact"},{"name":"PLC-activating angiotensin receptor signaling pathway","type":"exact"},{"name":"angiotensin-mediated signaling pathway via activation of phospholipase C","type":"exact"},{"name":"phospholipase C-activating angiotensin receptor signaling pathway","type":"exact"},{"name":"phospholipase C-activating angiotensin-mediated signaling pathway","type":"related"}],"termid":"GO:0086097"}


id: GO:0002332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immature B cells from the bone marrow become mature B cells in the spleen. Transitional stage B cells are subdivided into transitional one (T1) and transitional two (T2) stages and are short-lived and functionally incompetent.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immature B cell differentiation","termid":"GO:0002327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transitional stage B cell differentiation","synonyms":[{"name":"transitional stage B cell development","type":"related"},{"name":"transitional stage B lymphocyte differentiation","type":"exact"},{"name":"transitional stage B-cell differentiation","type":"exact"},{"name":"transitional stage B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002332"}


id: PBO:0029671
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiple_actomyosin_contractile_rings_present","termid":"PBO:0029671"}


id: PR:O74364
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- adn1 gene.","definition_xrefs":["UniProtKB:O74364","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion defective protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.03c","synonyms":[{"name":"Spom972h-adn1","type":"exact"}],"termid":"PR:O74364"}


id: PR:Q9HGM4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC543.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HGM4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FIT family protein scs3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC543.08","synonyms":[{"name":"Spom972h-SPBC543.08","type":"exact"}],"termid":"PR:Q9HGM4"}


id: PBO:0080091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 53","termid":"PBO:0080091"}


id: GO:0042780
data:
  {"annotated_genes":["SJAG_04885","SJAG_02288","SJAG_00195","SJAG_02993","SJAG_00997","SJAG_03761","SJAG_01704"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88200,89072,94542,94543,94999,105951],"is_not":false,"summary":null,"term":"GO:0042780"},{"annotations":[79103,113995,83806,105950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990180"},{"annotations":[113996,83807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001680"}]},"cv_name":"biological_process","definition":"The process in which the 3' end of a pre-tRNA molecule is converted to that of a mature tRNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA processing","termid":"GO:0008033"},{"relation_name":"is_a","term_name":"RNA 3'-end processing","termid":"GO:0031123"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00195":null,"SJAG_00997":null,"SJAG_01704":null,"SJAG_02288":null,"SJAG_02993":null,"SJAG_03761":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"tRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"tRNA 3' processing","type":"exact"}],"termid":"GO:0042780","terms_by_termid":{"GO:0001680":null,"GO:0042780":null,"GO:1990180":null}}


id: PBO:0054204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1584","termid":"PBO:0054204"}


id: PBO:0063518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDXDC2P-NPIPB14P readthrough, transcribed pseudogene","termid":"PBO:0063518"}


id: PBO:0057195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 367","termid":"PBO:0057195"}


id: GO:1905147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of smooth muscle hypertrophy.","definition_xrefs":["GOC:BHF_miRNA","GOC:BHF","GOC:TermGenie","PMID:22161164","GOC:bc","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle hypertrophy","termid":"GO:0014743"},{"relation_name":"is_a","term_name":"regulation of muscle adaptation","termid":"GO:0043502"},{"relation_name":"regulates","term_name":"smooth muscle hypertrophy","termid":"GO:0014895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of smooth muscle hypertrophy","termid":"GO:1905147"}


id: GO:0140482
data:
  {"annotated_genes":["SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90125],"is_not":false,"summary":null,"term":"GO:0140482"}]},"cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of iron.","definition_xrefs":["PMID:25806539","PMID:11956219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion sensor activity","termid":"GO:0140784"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"}],"interesting_parent_ids":["GO:0003674","GO:0140299"],"is_obsolete":false,"name":"iron sensor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140482","terms_by_termid":{"GO:0140482":null}}


id: PBO:0085507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S10, no bacterial homolog; RPS10B has a paralog, RPS10A, that arose from the whole genome duplication; mutations in the human homolog associated with Diamond-Blackfan anemia","termid":"PBO:0085507"}


id: PBO:0044680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage inducible transcript 3","termid":"PBO:0044680"}


id: PBO:0088938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic threonine-tRNA ligase Trs1","termid":"PBO:0088938"}


id: FYPO:0000445
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in G1 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle arrest in mitotic interphase","termid":"FYPO:0000837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"cell cycle arrest in mitotic G1 phase","synonyms":[{"name":"cell cycle arrest in G1 phase during mitotic cell cycle","type":"exact"},{"name":"cell cycle arrest in mitotic G1 phase during vegetative growth","type":"exact"},{"name":"mitotic G1 phase arrest","type":"exact"},{"name":"mitotic cell cycle arrest in G1 phase","type":"exact"},{"name":"mitotic cell cycle progression in G1 phase: arrested","type":"related"}],"termid":"FYPO:0000445"}


id: PBO:0029589
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_binding","termid":"PBO:0029589"}


id: PR:P56286
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 2 subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10602:SF0","PRO:DNx","OMA:SCHPO01324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.09c","secondary_identifiers":["UniProtKB:P56286"],"synonyms":[{"name":"Spom972h-EIF2S1","type":"exact"},{"name":"eIF-2-alpha (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P56286"}


id: PBO:0087521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of HIR nucleosome assembly complex; involved in regulation of histone gene transcription; recruits Swi-Snf complexes to histone gene promoters; promotes heterochromatic gene silencing with Asf1p; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087521"}


id: GO:0099120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a non-reproductive fruiting body over time, from its formation to the mature structure. A non-reproductive fruiting body is a colonial multicellular structure consisting of co-operating unicellular organisms, some of which are spores. An example of such a process is found in Dictyostelium discoideum and Myxococcus xanthus colonies.","definition_xrefs":["PMID:12448714","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"is_a","term_name":"biological process involved in intraspecies interaction between organisms","termid":"GO:0051703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"socially cooperative development","secondary_identifiers":["GO:0090702"],"synonyms":[{"name":"colonial development","type":"exact"},{"name":"non-reproductive fruiting body development","type":"related"},{"name":"socially co-operative development","type":"exact"}],"termid":"GO:0099120"}


id: PBO:0043382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clusterin like 1","termid":"PBO:0043382"}


id: GO:0031788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a motilin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"motilin receptor binding","synonyms":[{"name":"motilin receptor ligand","type":"narrow"}],"termid":"GO:0031788"}


id: PBO:0091030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp10","termid":"PBO:0091030"}


id: GO:0033726
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an aldehyde + H2O + 2 oxidized ferredoxin = an acid + 2 H+ + 2 reduced ferredoxin.","definition_xrefs":["EC:1.2.7.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor","termid":"GO:0016625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"aldehyde ferredoxin oxidoreductase activity","secondary_identifiers":["MetaCyc:1.2.7.5-RXN","RHEA:16421"],"synonyms":[{"name":"AOR","type":"related"},{"name":"aldehyde:ferredoxin oxidoreductase activity","type":"related"},{"name":"tungsten-containing aldehyde ferredoxin oxidoreductase activity","type":"related"}],"termid":"GO:0033726"}


id: PBO:0043275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 2 member L","termid":"PBO:0043275"}


id: GO:0098967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The exocytic fusion of neurotransmitter receptor containing vesicles with the postsynaptic membrane resulting in the integration of NT receptors, enabling them to participate in neurotransmitter reception. This process includes tethering and docking steps that prepare vesicles for fusion.","definition_xrefs":["PMID:19503082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocytosis","termid":"GO:0006887"},{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane neurotransmitter receptor levels","termid":"GO:0099072"},{"relation_name":"part_of","term_name":"neurotransmitter receptor transport to postsynaptic membrane","termid":"GO:0098969"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"exocytic insertion of neurotransmitter receptor to postsynaptic membrane","termid":"GO:0098967"}


id: PBO:0080786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related, Y-linked pseudogene 6","termid":"PBO:0080786"}


id: GO:0071045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of histone messenger RNA (mRNA) within the nucleus.","definition_xrefs":["PMID:17855393","GOC:krc","PMID:17179095","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone mRNA catabolic process","termid":"GO:0071044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"nuclear histone mRNA catabolic process","termid":"GO:0071045"}


id: PBO:0036247
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human COQ4","termid":"PBO:0036247"}


id: GO:0036452
data:
  {"annotated_genes":["SJAG_04912","SJAG_00821","SJAG_03250","SJAG_00416","SJAG_01242","SJAG_03783","SJAG_01981","SJAG_04489","SJAG_04349","SJAG_04024","SJAG_04936","SJAG_05207","SJAG_00900"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[84186,88043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000813"},{"annotations":[106693,107521,105840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000814"},{"annotations":[84021,94017,96945,99793,102601,99204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000815"},{"annotations":[101013,87544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033565"}]},"cv_name":"cellular_component","definition":"An endosomal sorting complex involved in membrane fission processes related to sorting of multivesicular bodies (MVB) in the endocytic pathway, cytokinesis and viral budding among other processes.","definition_xrefs":["VZ:1536","PMID:16689637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"endosome","termid":"GO:0005768"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00416":null,"SJAG_00821":null,"SJAG_00900":null,"SJAG_01242":null,"SJAG_01981":null,"SJAG_03250":null,"SJAG_03783":null,"SJAG_04024":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04912":null,"SJAG_04936":null,"SJAG_05207":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575","GO:0005768","GO:0032991"],"is_obsolete":false,"name":"ESCRT complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:ESCRT"],"synonyms":[{"name":"endosomal sorting complex required for transport","type":"exact"}],"termid":"GO:0036452","terms_by_termid":{"GO:0000813":null,"GO:0000814":null,"GO:0000815":null,"GO:0033565":null}}


id: GO:0045065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized T cell acquires specialized features of a cytotoxic T cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytotoxic T cell differentiation","synonyms":[{"name":"cytotoxic T cell development","type":"related"},{"name":"cytotoxic T lymphocyte selection","type":"exact"},{"name":"cytotoxic T-cell selection","type":"exact"},{"name":"cytotoxic T-lymphocyte selection","type":"exact"}],"termid":"GO:0045065"}


id: GO:0030389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving fructosamine, a fructose molecule containing an amino group in place of a hydroxyl group.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino sugar metabolic process","termid":"GO:0006040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fructosamine metabolic process","synonyms":[{"name":"fructosamine metabolism","type":"exact"}],"termid":"GO:0030389"}


id: PBO:0045125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dematin actin binding protein","termid":"PBO:0045125"}


id: PBO:0053461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 421","termid":"PBO:0053461"}


id: PBO:0080531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASH complex subunit 3","termid":"PBO:0080531"}


id: PBO:0086582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; deletion mutant is viable and has no detectable phenotype","termid":"PBO:0086582"}


id: GO:0014877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a muscle inactivity stimulus. This process occurs as part of the regulation of muscle adaptation.","definition_xrefs":["GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to muscle inactivity","termid":"GO:0014870"},{"relation_name":"is_a","term_name":"response to stimulus involved in regulation of muscle adaptation","termid":"GO:0014874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to muscle inactivity involved in regulation of muscle adaptation","termid":"GO:0014877"}


id: FYPO:0004444
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the prospore membrane is decreased, and the protein is instead present in the plasma membrane, during the second meiotic nuclear division.","definition_xrefs":["PMID:21832151","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"decreased protein localization to prospore membrane","termid":"FYPO:0004442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to prospore membrane during meiosis II with protein mislocalized to plasma membrane","synonyms":[{"name":"decreased protein localisation to prospore membrane during meiosis II with protein mislocalized to plasma membrane","type":"exact"},{"name":"decreased protein localization to forespore membrane during meiosis II with protein mislocalized to plasma membrane","type":"exact"},{"name":"decreased protein localization to prospore membrane during second meiotic nuclear division with protein mislocalized to plasma membrane","type":"exact"},{"name":"decreased protein localization to prospore membrane with protein mislocalized to plasma membrane during meiosis II","type":"related"},{"name":"reduced protein localization to prospore membrane during meiosis II with protein mislocalized to plasma membrane","type":"exact"}],"termid":"FYPO:0004444"}


id: GO:0045023
data:
  {"annotated_genes":["SJAG_03689","SJAG_02621","SJAG_03356"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114155,112053,95620],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0070317"}]},"cv_name":"biological_process","definition":"The mitotic cell cycle phase transition whose occurrence commits the cell from the G0 quiescent state to the G1 phase. Under certain conditions, cells exit the cell cycle during G1 and remain in the G0 state as nongrowing, non-dividing (quiescent) cells. Appropriate stimulation of such cells induces them to return to G1 and resume growth and division. The G0 to G1 transition is accompanied by many changes in the program of gene expression.","definition_xrefs":["GOC:mtg_cell_cycle","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03356":null,"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"G0 to G1 transition","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0045023","terms_by_termid":{"GO:0070317":null}}


id: PBO:0061373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 33","termid":"PBO:0061373"}


id: PBO:0043762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase copper chaperone COX11","termid":"PBO:0043762"}


id: PBO:0003088
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed during S phase","termid":"PBO:0003088"}


id: GO:0010495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An siRNA-mediated posttranscriptional gene silencing pathway in which small interfering RNAs (siRNAs) direct the cleavage of target mRNAs, and in which the silencing signal originates in one tissue and occurs in a different tissue.","definition_xrefs":["GOC:dph","PMID:11590235","GOC:tb","PMID:17785412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siRNA-mediated gene silencing by mRNA destabilization","termid":"GO:0090625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"siRNA-mediated long-distance post-transcriptional gene silencing","synonyms":[{"name":"long-distance posttranscriptional gene silencing","type":"broad"},{"name":"long-distance propagation of posttranscriptional gene silencing","type":"broad"},{"name":"siRNA-mediated long-distance posttranscriptional gene silencing","type":"exact"}],"termid":"GO:0010495"}


id: GO:0050431
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to TGF-beta, transforming growth factor beta, a multifunctional peptide that controls proliferation, differentiation and other functions in many cell types.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"},{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"transforming growth factor beta binding","synonyms":[{"name":"TGF-beta binding","type":"exact"},{"name":"TGFbeta binding","type":"exact"},{"name":"transforming growth factor beta ligand binding to type I receptor","type":"related"},{"name":"transforming growth factor beta ligand binding to type II receptor","type":"related"}],"termid":"GO:0050431"}


id: GO:0061123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of positive chemotaxis","termid":"GO:0050928"},{"relation_name":"is_a","term_name":"regulation of positive chemotaxis to cAMP","termid":"GO:0061118"},{"relation_name":"negatively_regulates","term_name":"chemotaxis to cAMP","termid":"GO:0043327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of positive chemotaxis to cAMP","termid":"GO:0061123"}


id: SO:0000271
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a tryptophan anticodon, and a 3' tryptophan binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"tryptophan_tRNA_primary_transcript","termid":"SO:0000228"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophanyl_tRNA","synonyms":[{"name":"tryptophanyl tRNA","type":"exact"},{"name":"tryptophanyl-transfer RNA","type":"exact"},{"name":"tryptophanyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000271"}


id: GO:0097592
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region of the ventral disc of Giardia species (trophozoite stage) where two portions of the same array of microtubules overlap (the microtubule array makes a complete circle and overlaps on itself).","definition_xrefs":["GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical entity","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ventral disc","termid":"GO:0097597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ventral disc overlap zone","synonyms":[{"name":"overlap zone","type":"broad"},{"name":"ventral disk overlap zone","type":"related"}],"termid":"GO:0097592"}


id: GO:0018441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 8Fe-7S iron-sulfur cluster via hexakis-L-cysteinyl L-serinyl octairon heptasulfide, found in nitrogenase.","definition_xrefs":["RESID:AA0300","PMID:9063865"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via hexakis-L-cysteinyl L-serinyl octairon heptasulfide (obsolete GO:0018441)","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via hexakis-L-cysteinyl L-serinyl octairon heptasulphide","type":"exact"}],"termid":"GO:0018441"}


id: PBO:0088017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Type I transmembrane sorting receptor for multiple vacuolar hydrolases; cycles between the late-Golgi and prevacuolar endosome-like compartments","termid":"PBO:0088017"}


id: GO:2000781
data:
  {"annotated_genes":["SJAG_00823"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of double-strand break repair.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA repair","termid":"GO:0045739"},{"relation_name":"is_a","term_name":"regulation of double-strand break repair","termid":"GO:2000779"},{"relation_name":"positively_regulates","term_name":"double-strand break repair","termid":"GO:0006302"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006281"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of double-strand break repair","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000781","terms_by_termid":{"GO:2001034":null}}


id: GO:0033899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the two-stage endonucleolytic cleavage to nucleoside 3'-phosphates and 3'-phosphooligonucleotides ending in Ap or Gp with 2',3'-cyclic phosphate intermediates.","definition_xrefs":["EC:4.6.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity, producing 3'-phosphomonoesters","termid":"GO:0016892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0140098","GO:0016787"],"is_obsolete":false,"name":"ribonuclease U2 activity","secondary_identifiers":["MetaCyc:3.1.27.3-RXN","MetaCyc:RXN-19928"],"synonyms":[{"name":"RNase U2 activity","type":"related"},{"name":"pleospora RNase activity","type":"exact"},{"name":"purine specific endoribonuclease activity","type":"exact"},{"name":"purine-specific RNase activity","type":"exact"},{"name":"purine-specific ribonuclease activity","type":"exact"},{"name":"ribonuclease (purine) activity","type":"exact"},{"name":"trichoderma koningi RNase III activity","type":"exact"}],"termid":"GO:0033899"}


id: PBO:0057837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3153","termid":"PBO:0057837"}


id: GO:0030356
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete small cytoplasmic ribonucleoprotein (obsolete GO:0030356)","synonyms":[{"name":"scRNP","type":"exact"},{"name":"small cytoplasmic ribonucleoprotein","type":"exact"}],"termid":"GO:0030356"}


id: SO:0002067
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A deletion of the HERV mobile element with respect to a reference.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"Endogenous_Retrovirus_LTR_retrotransposon","termid":"SO:0002268"},{"relation_name":"is_a","term_name":"mobile_element_deletion","termid":"SO:0002066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERV_deletion","synonyms":[{"name":"HERV deletion","type":"exact"}],"termid":"SO:0002067"}


id: PR:O13822
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC19A8.06 gene.","definition_xrefs":["UniProtKB:O13822","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C19A8.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.06","synonyms":[{"name":"Spom972h-SPAC19A8.06","type":"exact"}],"termid":"PR:O13822"}


id: PBO:0057733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1321","termid":"PBO:0057733"}


id: GO:0170051
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex containing a small CB-specific RNA (scaRNA), with a short sequence motif (GU/UG wobble stem) for CB localization that is capable of methylation of target RNAs.","definition_xrefs":["PMID:27775477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"box C/D RNP complex","termid":"GO:0170049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"box C/D methylation guide scaRNP complex","termid":"GO:0170051"}


id: GO:0033718
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: pyranose + acceptor = 2-dehydropyranose (or 3-dehydropyranose or 2,3-didehydropyranose) + reduced acceptor, and a pyranoside + acceptor = a 3-dehydropyranoside (or 3,4-didehydropyranoside) + reduced acceptor.","definition_xrefs":["EC:1.1.99.29"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"pyranose dehydrogenase (acceptor) activity","secondary_identifiers":["MetaCyc:RXN-7963","MetaCyc:RXN-7966","MetaCyc:RXN-7962","MetaCyc:RXN-7965","MetaCyc:RXN-7961"],"synonyms":[{"name":"PDH","type":"related"},{"name":"pyranose dehydrogenase activity","type":"related"},{"name":"pyranose-quinone oxidoreductase activity","type":"related"},{"name":"pyranose:acceptor oxidoreductase activity","type":"related"},{"name":"quinone-dependent pyranose dehydrogenase activity","type":"related"}],"termid":"GO:0033718"}


id: FYPO:0006591
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of DNA damage measured in a cell during S phase of the mitotic cell cycle is greater than normal. The number, extent, or both of damage sites may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased DNA damage during vegetative growth","termid":"FYPO:0003547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased DNA damage during mitotic S phase","synonyms":[{"name":"increased DNA damage during S phase during vegetative growth","type":"exact"},{"name":"increased DNA damage during S phase of mitotic cell cycle","type":"exact"},{"name":"increased number of DNA lesions during mitotic S phase","type":"related"}],"termid":"FYPO:0006591"}


id: PR:Q9USM2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC16A11.15c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USM2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16A11.15c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.15c","synonyms":[{"name":"Spom972h-SPCC16A11.15c","type":"exact"}],"termid":"PR:Q9USM2"}


id: GO:0032302
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimer involved in binding to and correcting insertion/deletion mutations. In human the complex consists of two subunits, MSH2 and MSH3.","definition_xrefs":["PMID:11005803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair complex","termid":"GO:0032300"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"MutSbeta complex","synonyms":[{"name":"MMR complex","type":"broad"},{"name":"MSH2/MSH3 complex","type":"exact"}],"termid":"GO:0032302"}


id: GO:0010198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synergid cells undergo degeneration and death in response to penetration by the pollen tube. It is an active process that involves a dramatic decrease in cell volume, collapse of the vacuoles, and complete disintegration of the plasma membrane and most organelles.","definition_xrefs":["PMID:12215516","GOC:isa_complete","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"programmed cell death involved in cell development","termid":"GO:0010623"},{"relation_name":"part_of","term_name":"pollination","termid":"GO:0009856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synergid death","secondary_identifiers":["GO:0048470"],"synonyms":[{"name":"synergid cell death","type":"exact"},{"name":"synergid degeneration","type":"exact"}],"termid":"GO:0010198"}


id: PBO:0083173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps ORF RSC30/YHR056C","termid":"PBO:0083173"}


id: PBO:0062216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily AM member 1 pseudogene","termid":"PBO:0062216"}


id: PBO:0065729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain containing 2A pseudogene 1","termid":"PBO:0065729"}


id: GO:0071443
data:
  {"annotated_genes":["SJAG_00585"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102979],"is_not":false,"summary":null,"term":"GO:0071443"}]},"cv_name":"molecular_function","definition":"Binding to DNA sequences encoding transfer RNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00585":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"tDNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071443","terms_by_termid":{"GO:0071443":null}}


id: PBO:0089228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit","termid":"PBO:0089228"}


id: PBO:0046015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF2AK1 pseudogene 1","termid":"PBO:0046015"}


id: FYECO:0000341
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which dithiothreitol (DTT) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ DTT","synonyms":[{"name":"+ dithiothreitol","type":"exact"}],"termid":"FYECO:0000341"}


id: PR:O74498
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A FAS-associated factor 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain-containing protein 10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.11","secondary_identifiers":["UniProtKB:O74498"],"synonyms":[{"name":"Spom972h-FAF2","type":"exact"}],"termid":"PR:O74498"}


id: PBO:0041476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 65","termid":"PBO:0041476"}


id: GO:0051147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle cell differentiation.","definition_xrefs":["GOC:ai","CL:0000187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"muscle cell differentiation","termid":"GO:0042692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle cell differentiation","termid":"GO:0051147"}


id: PBO:0043386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citramalyl-CoA lyase","termid":"PBO:0043386"}


id: GO:0080178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the addition of a 5-carbamoylmethyl group to a uridine residue in RNA.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methylation","termid":"GO:0030488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006399","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"5-carbamoylmethyl uridine residue modification","synonyms":[{"name":"5-carbamoylmethyluridine metabolic process","type":"related"}],"termid":"GO:0080178"}


id: PBO:0002139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Uap56","termid":"PBO:0002139"}


id: GO:0035231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a cytoneme, a long, thin and polarized actin-based cytoplasmic extension that projects from a cell.","definition_xrefs":["PMID:10675901","PMID:10367889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"},{"relation_name":"part_of","term_name":"cytoneme morphogenesis","termid":"GO:0003399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"cytoneme assembly","synonyms":[{"name":"cytoneme biogenesis","type":"related"}],"termid":"GO:0035231"}


id: PBO:0001855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"octicosapeptide repeat","termid":"PBO:0001855"}


id: GO:0019934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette that starts with production of cyclic GMP (cGMP), and ends with activation of downstream effectors that further transmit the signal within the cell.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signaling cassette","termid":"GO:0141124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cGMP-mediated signaling","synonyms":[{"name":"cGMP-mediated signalling","type":"exact"}],"termid":"GO:0019934"}


id: PBO:0072495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 24","termid":"PBO:0072495"}


id: GO:0070489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adhesion of one T cell to one or more other T cells via adhesion molecules.","definition_xrefs":["PMID:12972508","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte aggregation","termid":"GO:0071593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"T cell aggregation","synonyms":[{"name":"T lymphocyte aggregation","type":"exact"},{"name":"T-cell aggregation","type":"exact"},{"name":"T-lymphocyte aggregation","type":"exact"}],"termid":"GO:0070489"}


id: GO:0019060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a viral protein within the host cell.","definition_xrefs":["PMID:9188566","ISBN:0781702534","PMID:11581394","GOC:ai","ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont intracellular protein transport in host","termid":"GO:0030581"},{"relation_name":"part_of","term_name":"regulation by virus of viral protein levels in host cell","termid":"GO:0046719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"intracellular transport of viral protein in host cell","secondary_identifiers":["GO:0046743","GO:0046742","GO:0046801"],"synonyms":[{"name":"cytoplasmic viral capsid transport","type":"narrow"},{"name":"intracellular transport of viral capsid in host cell","type":"narrow"},{"name":"intracellular transport of viral capsid protein in host cell","type":"narrow"},{"name":"intracellular transport of viral proteins in host cell","type":"exact"},{"name":"intracellular viral capsid transport","type":"narrow"},{"name":"intracellular viral protein transport","type":"exact"},{"name":"nuclear viral capsid transport","type":"narrow"},{"name":"viral capsid transport in host cell cytoplasm","type":"narrow"},{"name":"viral capsid transport in host cell nucleus","type":"narrow"}],"termid":"GO:0019060"}


id: GO:0052530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of the resistance gene-dependent defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of symbiont resistance gene-dependent defense response (obsolete GO:0052530)","synonyms":[{"name":"positive regulation by organism of defense response in symbiont by specific elicitors","type":"exact"},{"name":"positive regulation by organism of pathogen-race/symbiont plant cultivar-specific resistance in symbiont","type":"exact"},{"name":"positive regulation by organism of symbiont gene-for-gene resistance","type":"exact"},{"name":"positive regulation by organism of symbiont resistance gene-dependent defense response","type":"exact"}],"termid":"GO:0052530"}


id: PBO:0080092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 54","termid":"PBO:0080092"}


id: GO:0035480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell that contributes to heart induction.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of Notch signaling pathway involved in heart induction (obsolete GO:0035480)","synonyms":[{"name":"regulation of Notch signalling pathway involved in heart induction","type":"exact"}],"termid":"GO:0035480"}


id: PBO:0059272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L35 pseudogene 1","termid":"PBO:0059272"}


id: GO:0102055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3'-phosphonato-5'-adenylyl sulfate + a 12-hydroxyjasmonate = adenosine 3',5'-bismonophosphate + a 12-hydroxyjasmonate sulfate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 12-hydroxyjasmonate sulfotransferase activity (obsolete GO:0102055)","termid":"GO:0102055"}


id: PBO:0077816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor protein p53 inducible protein 13","termid":"PBO:0077816"}


id: GO:0045963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving dopamine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dopamine metabolic process","termid":"GO:0042053"},{"relation_name":"is_a","term_name":"negative regulation of catecholamine metabolic process","termid":"GO:0045914"},{"relation_name":"negatively_regulates","term_name":"dopamine metabolic process","termid":"GO:0042417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dopamine metabolic process","synonyms":[{"name":"down regulation of dopamine metabolic process","type":"exact"},{"name":"down-regulation of dopamine metabolic process","type":"exact"},{"name":"downregulation of dopamine metabolic process","type":"exact"},{"name":"inhibition of dopamine metabolic process","type":"narrow"},{"name":"negative regulation of dopamine metabolism","type":"exact"}],"termid":"GO:0045963"}


id: PBO:0060874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neural EGFL like 2","termid":"PBO:0060874"}


id: GO:1903186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vitellogenesis.","definition_xrefs":["GO_REF:0000058","GOC:mr","PMID:19467235","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"vitellogenesis","termid":"GO:0007296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vitellogenesis","synonyms":[{"name":"regulation of yolk production","type":"exact"}],"termid":"GO:1903186"}


id: FYPO:0002552
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer lipid droplets than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"lipid droplets present in decreased numbers","synonyms":[{"name":"decreased level of lipid droplets","type":"related"},{"name":"fewer lipid droplets present during vegetative growth","type":"exact"},{"name":"lipid droplets present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"lipid droplets present in decreased numbers during vegetative growth","type":"exact"},{"name":"lipid droplets present in reduced numbers","type":"exact"},{"name":"lipid particles present in decreased numbers","type":"exact"}],"termid":"FYPO:0002552"}


id: GO:0070588
data:
  {"annotated_genes":["SJAG_02532","SJAG_04668","SJAG_00296","SJAG_03631","SJAG_04757","SJAG_03399","SJAG_04698","SJAG_02440","SJAG_01400","SJAG_03873","SJAG_04028","SJAG_02877","SJAG_02322","SJAG_04551","SJAG_00321","SJAG_04096","SJAG_05229","SJAG_01090","SJAG_03850","SJAG_04471","SJAG_02019"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86756,90873,91515,91745,94390,97686,104718,105420,109991,113457],"is_not":false,"summary":null,"term":"GO:0070588"},{"annotations":[91695,93420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036444"},{"annotations":[88393,88447,95689,110501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098703"},{"annotations":[111632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140146"},{"annotations":[87250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061856"},{"annotations":[87268,109427],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905949"},{"annotations":[98209],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905665"},{"annotations":[89435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051209"},{"annotations":[104721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"A process in which a calcium ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transport","termid":"GO:0006816"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_00321":null,"SJAG_01090":null,"SJAG_01400":null,"SJAG_02019":null,"SJAG_02322":null,"SJAG_02440":null,"SJAG_02532":null,"SJAG_02877":null,"SJAG_03399":null,"SJAG_03631":null,"SJAG_03850":null,"SJAG_03873":null,"SJAG_04028":null,"SJAG_04096":null,"SJAG_04471":null,"SJAG_04551":null,"SJAG_04668":null,"SJAG_04698":null,"SJAG_04757":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"calcium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"calcium ion membrane transport","type":"exact"},{"name":"transmembrane calcium transport","type":"exact"}],"termid":"GO:0070588","terms_by_termid":{"GO:0036444":null,"GO:0051209":null,"GO:0061454":null,"GO:0061856":null,"GO:0070588":null,"GO:0098703":null,"GO:0140146":null,"GO:1905665":null,"GO:1905949":null}}


id: GO:0048335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate determination","termid":"GO:0048334"},{"relation_name":"is_a","term_name":"negative regulation of cell fate determination","termid":"GO:1905934"},{"relation_name":"negatively_regulates","term_name":"mesodermal cell fate determination","termid":"GO:0007500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesodermal cell fate determination","synonyms":[{"name":"down regulation of mesodermal cell fate determination","type":"exact"},{"name":"down-regulation of mesodermal cell fate determination","type":"exact"},{"name":"downregulation of mesodermal cell fate determination","type":"exact"},{"name":"inhibition of mesodermal cell fate determination","type":"narrow"}],"termid":"GO:0048335"}


id: GO:0015407
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + monosaccharide(out) = ADP + phosphate + monosaccharide(in). Ribose, xylose, arabinose, galactose and methylgalactoside are imported.","definition_xrefs":["MetaCyc:3.6.3.17-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide transmembrane transporter activity","termid":"GO:0015145"},{"relation_name":"is_a","term_name":"ABC-type carbohydrate transporter activity","termid":"GO:0043211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type monosaccharide transporter activity","synonyms":[{"name":"ATP-dependent monosaccharide transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled monosaccharide transmembrane transporter activity","type":"related"},{"name":"monosaccharide ABC transporter","type":"narrow"},{"name":"monosaccharide-importing ATPase activity","type":"narrow"},{"name":"monosaccharide-transporting ATPase activity","type":"exact"}],"termid":"GO:0015407"}


id: PBO:0041396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C6","termid":"PBO:0041396"}


id: GO:1900337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methane biosynthetic process from carbon monoxide.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from carbon monoxide","termid":"GO:1900336"},{"relation_name":"is_a","term_name":"negative regulation of alkane biosynthetic process","termid":"GO:1901578"},{"relation_name":"is_a","term_name":"negative regulation of cellular respiration","termid":"GO:1901856"},{"relation_name":"negatively_regulates","term_name":"methane biosynthetic process from carbon monoxide","termid":"GO:2001134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"negative regulation of methane biosynthetic process from carbon monoxide","synonyms":[{"name":"down regulation of methane biosynthetic process from carbon monoxide","type":"exact"},{"name":"down-regulation of methane biosynthetic process from carbon monoxide","type":"exact"},{"name":"downregulation of methane biosynthetic process from carbon monoxide","type":"exact"},{"name":"inhibition of methane biosynthetic process from carbon monoxide","type":"narrow"}],"termid":"GO:1900337"}


id: PBO:0030348
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-incomplete,_unequal_mitotic_sister_chromatid_segregation","termid":"PBO:0030348"}


id: FYPO:0006156
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sodium arsenite (AsNaO2). Cells stop growing (and may die) at a concentration of sodium arsenite that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to arsenic","termid":"FYPO:0000093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to sodium arsenite","synonyms":[{"name":"hypersensitive to sodium arsenite","type":"exact"},{"name":"sensitive to AsNaO2","type":"exact"},{"name":"sensitive to sodium arsenite during mitotic cell cycle","type":"related"},{"name":"sensitive to sodium arsenite during vegetative growth","type":"exact"}],"termid":"FYPO:0006156"}


id: PBO:0042607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 7","termid":"PBO:0042607"}


id: PBO:0082883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclic nucleotide phosphodiesterase; hydrolyzes ADP-ribose 1'', 2''-cyclic phosphate to ADP-ribose 1''-phosphate; may have a role in tRNA splicing; no detectable phenotype is conferred by null mutation or by overexpression; protein abundance increases in response to DNA replication stress","termid":"PBO:0082883"}


id: GO:0007354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the anterior/posterior axis of the embryo by products of genes expressed in the zygote; exemplified in insects by the gap genes, pair rule genes and segment polarity gene cascade.","definition_xrefs":["ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior axis specification, embryo","termid":"GO:0008595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"zygotic determination of anterior/posterior axis, embryo","termid":"GO:0007354"}


id: PBO:0054068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1415","termid":"PBO:0054068"}


id: FYPO:0005403
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the single-stranded telomeric 3' overhang is not present. Total telomere length may be normal or abnormal.","definition_xrefs":["PMID:12861005","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere morphology during vegetative growth","termid":"FYPO:0002254"},{"relation_name":"is_a","term_name":"abnormal telomere structure","termid":"FYPO:0006510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000293","FYPO:0000641","FYPO:0005447"],"is_obsolete":false,"name":"telomeric 3' overhang absent during vegetative growth","synonyms":[{"name":"single-stranded telomeric 3' overhang absent during vegetative growth","type":"exact"},{"name":"telomere 3' overhang absent during vegetative growth","type":"exact"},{"name":"telomeric 3' overhang absent during mitotic cell cycle","type":"related"},{"name":"telomeric G-strand overhang absent during vegetative growth","type":"exact"}],"termid":"FYPO:0005403"}


id: FYPO:0007443
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the endoplasmic reticulum is abolished, and the protein is present in the cytosol instead.","definition_xrefs":["PomBase:mah","PMID:32320462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to endoplasmic reticulum during vegetative growth","termid":"FYPO:0003777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to endoplasmic reticulum membrane, with protein mislocalized to cytosol","synonyms":[{"name":"abolished protein localization to ER membrane, with protein mislocalized to cytosol","type":"exact"},{"name":"abolished protein localization to endoplasmic reticulum membrane, with protein mislocalized to cytosol during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to endoplasmic reticulum membrane, with protein mislocalized to cytosol during vegetative growth","type":"exact"}],"termid":"FYPO:0007443"}


id: PBO:0027931
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_cellular_response_to_heat","termid":"PBO:0027931"}


id: PBO:0071501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 4","termid":"PBO:0071501"}


id: PBO:0067159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 211, pseudogene","termid":"PBO:0067159"}


id: GO:0006147
data:
  {"annotated_genes":["SJAG_01997"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111098],"is_not":false,"summary":null,"term":"GO:0006147"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of guanine, 2-amino-6-hydroxypurine, a purine that is one of the five main bases found in nucleic acids and a component of a number of phosphorylated guanosine derivatives whose metabolic or regulatory functions are important.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase catabolic process","termid":"GO:0006145"},{"relation_name":"is_a","term_name":"guanine metabolic process","termid":"GO:0046098"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"guanine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"guanine breakdown","type":"exact"},{"name":"guanine catabolism","type":"exact"},{"name":"guanine degradation","type":"exact"}],"termid":"GO:0006147","terms_by_termid":{"GO:0006147":null}}


id: PBO:0067068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 96, pseudogene","termid":"PBO:0067068"}


id: GO:0010141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The pathway by which guanine, xanthine and their nucleoside from purine nucleotides breakdown are converted back to purine nucleotides. The pathway is important in cells where there is no de-novo purine nucleotides biosynthesis.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete guanine, xanthine and their nucleoside salvage (obsolete GO:0010141)","synonyms":[{"name":"guanine, xanthine and their nucleoside salvage","type":"exact"}],"termid":"GO:0010141"}


id: SO:0001508
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute of alteration of one or more chromosomes.","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alteration_attribute","synonyms":[{"name":"alteration attribute","type":"exact"}],"termid":"SO:0001508"}


id: PBO:0050559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine rich carboxyl terminus 1","termid":"PBO:0050559"}


id: SO:0002104
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogenic joining region which closely resembles a known functional T receptor (TR) joining gene but in which the coding region has stop codons, frameshift mutations or a mutation that effects the initiation codon that rearranges at the DNA level and codes the joining region of the variable domain of an immunoglobulin chain.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T_cell_receptor_pseudogene","termid":"SO:0002099"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TR_J_pseudogene","synonyms":[{"name":"T cell receptor J pseudogene","type":"exact"},{"name":"T cell receptor Joining pseudogene","type":"exact"},{"name":"TR J pseudogene","type":"exact"},{"name":"T_cell_receptor_J_pseudogene","type":"exact"},{"name":"T_cell_receptor_Joining_pseudogene","type":"exact"}],"termid":"SO:0002104"}


id: PBO:0054669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2075","termid":"PBO:0054669"}


id: PBO:0036189
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_spindle_elongation_without_chromosome_separation_with_centromeric_DNA_dissociated_from_spindle","termid":"PBO:0036189"}


id: GO:1902254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway by p53 class mediator.","definition_xrefs":["GOC:rl","PMID:15705871","GOC:mtg_apoptosis","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction by p53 class mediator","termid":"GO:1901797"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:1902253"},{"relation_name":"is_a","term_name":"negative regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001243"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:0072332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator","synonyms":[{"name":"down regulation of intrinsic apoptotic signaling pathway by p53 class mediator","type":"exact"},{"name":"down regulation of intrinsic apoptotic signaling pathway by signal transduction by p53 class mediator","type":"exact"},{"name":"down regulation of signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"down-regulation of intrinsic apoptotic signaling pathway by p53 class mediator","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway by signal transduction by p53 class mediator","type":"exact"},{"name":"down-regulation of signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"downregulation of intrinsic apoptotic signaling pathway by p53 class mediator","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway by signal transduction by p53 class mediator","type":"exact"},{"name":"downregulation of signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"inhibition of intrinsic apoptotic signaling pathway by p53 class mediator","type":"narrow"},{"name":"inhibition of intrinsic apoptotic signaling pathway by signal transduction by p53 class mediator","type":"narrow"},{"name":"inhibition of signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"},{"name":"negative regulation of intrinsic apoptotic signaling pathway by signal transduction by p53 class mediator","type":"exact"},{"name":"negative regulation of signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"}],"termid":"GO:1902254"}


id: PBO:0049742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heparin binding EGF like growth factor","termid":"PBO:0049742"}


id: FYPO:0004582
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell cycle arrest in response to nitrogen starvation occurs in G1 phase, but its occurrence is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle arrest in mitotic G1 phase during nitrogen starvation","termid":"FYPO:0001000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001985","FYPO:0000298","FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","synonyms":[{"name":"increased cell cycle arrest in mitotic G1 phase during cellular response to nitrogen starvation","type":"exact"},{"name":"increased cell cycle arrest in mitotic G1 phase in response to nitrogen depletion","type":"exact"},{"name":"increased cell cycle arrest in mitotic G1 phase in response to nitrogen deprivation","type":"exact"},{"name":"increased mitotic G1 arrest in response to nitrogen starvation","type":"exact"},{"name":"increased mitotic cell cycle arrest in G1 phase in response to nitrogen starvation","type":"exact"},{"name":"increased nitrogen deprivation-induced G1 arrest","type":"exact"}],"termid":"FYPO:0004582"}


id: PBO:0110488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor kinase PRP4K","termid":"PBO:0110488"}


id: FYPO:0000694
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA-1,N6-ethenoadenine N-glycosylase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal DNA-1,N6-ethenoadenine N-glycosylase activity","termid":"FYPO:0000692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abolished DNA-1,N6-ethenoadenine N-glycosylase activity","synonyms":[{"name":"DNA-1,N6-ethenoadenine N-glycosylase activity abolished","type":"exact"}],"termid":"FYPO:0000694"}


id: PBO:0038742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTN1 divergent transcript","termid":"PBO:0038742"}


id: PBO:0063059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter of CDKN1A antisense DNA damage activated RNA","termid":"PBO:0063059"}


id: GO:1990747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of trypsinogen from the cells of the exocrine pancreas.","definition_xrefs":["PMID:12771515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"part_of","term_name":"pancreatic juice secretion","termid":"GO:0030157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"pancreatic trypsinogen secretion","synonyms":[{"name":"pancreatic trypsinogen release","type":"exact"}],"termid":"GO:1990747"}


id: GO:0046992
data:
  {"annotated_genes":["SJAG_00832"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061686"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which X-H and Y-H form X-Y.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00832":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.21.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with other acceptors","type":"narrow"}],"termid":"GO:0046992","terms_by_termid":{"GO:0061686":null}}


id: GO:0010265
data:
  {"annotated_genes":["SJAG_05297"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[85311],"is_not":false,"summary":null,"term":"GO:0010265"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the SKP1-Cullin/Cdc53-F-box protein ubiquitin ligase (SCF) complex.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05297":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"SCF complex assembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010265","terms_by_termid":{"GO:0010265":null}}


id: GO:1905615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of developmental vegetative growth.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:11606552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"regulation of developmental vegetative growth","termid":"GO:1905613"},{"relation_name":"positively_regulates","term_name":"developmental vegetative growth","termid":"GO:0080186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of developmental vegetative growth","synonyms":[{"name":"activation of developmental vegetative growth","type":"narrow"},{"name":"up regulation of developmental vegetative growth","type":"exact"},{"name":"up-regulation of developmental vegetative growth","type":"exact"},{"name":"upregulation of developmental vegetative growth","type":"exact"}],"termid":"GO:1905615"}


id: PBO:0040881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 6","termid":"PBO:0040881"}


id: PBO:0053788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1039","termid":"PBO:0053788"}


id: GO:0046293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of formaldehyde (methanal, H2C=O), the simplest aldehyde.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule biosynthetic process","termid":"GO:0044283"},{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"},{"relation_name":"is_a","term_name":"formaldehyde metabolic process","termid":"GO:0046292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"formaldehyde biosynthetic process","synonyms":[{"name":"formaldehyde anabolism","type":"exact"},{"name":"formaldehyde biosynthesis","type":"exact"},{"name":"formaldehyde formation","type":"exact"},{"name":"formaldehyde synthesis","type":"exact"},{"name":"methanal biosynthesis","type":"exact"},{"name":"methanal biosynthetic process","type":"exact"}],"termid":"GO:0046293"}


id: FYPO:0006412
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more histone RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells) during S phase of the mitotic cell cycle. Histone RNAs are transcribed from genes encoding histones.","definition_xrefs":["PMID:17452352","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of histone gene mRNA during vegetative growth","termid":"FYPO:0004906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"decreased level of histone gene mRNA during mitotic S phase","synonyms":[{"name":"decreased histone gene mRNA accumulation during mitotic S phase","type":"related"},{"name":"decreased level of histone gene RNA during mitotic S phase","type":"exact"},{"name":"decreased level of histone gene mRNA during S phase of mitotic cell cycle","type":"exact"},{"name":"decreased level of histone gene transcripts during mitotic S phase","type":"exact"},{"name":"reduced level of histone gene mRNA during mitotic S phase","type":"exact"}],"termid":"FYPO:0006412"}


id: PBO:0000613
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motor neurone disease","termid":"PBO:0000613"}


id: PBO:0029211
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_dTTP_biosynthetic_process","termid":"PBO:0029211"}


id: PBO:0091517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0300 family protein 3","termid":"PBO:0091517"}


id: PBO:0109193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi alpha-1,2-mannosyltransferase Omh3","termid":"PBO:0109193"}


id: FYPO:0007697
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the activity of a DNA strand exchange inhibitor is decreased.","definition_xrefs":["PMID:33493431","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"decreased DNA strand exchange inhibitor activity","synonyms":[{"name":"decreased RecA-family recombinase inhibitor activity","type":"exact"},{"name":"decreased negative regulation of RecA-family recombinase activity","type":"related"},{"name":"reduced DNA strand exchange inhibitor activity","type":"exact"}],"termid":"FYPO:0007697"}


id: FYECO:0000215
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition where the pH of the medium or assay buffer is lower than the standard pombe growth medium of pH of ~5.6.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low pH","termid":"FYECO:0000215"}


id: PBO:0036163
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_heterochromatin_domain_during_vegetative_growth","termid":"PBO:0036163"}


id: PBO:0090805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane anchored protein, claudin family, SUR7 subfamily, predicted membrane sensor Pun1","termid":"PBO:0090805"}


id: PBO:0083875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein that regulates pheromone-dependent morphogenesis; interacts with Sgt1p via a Leucine-Rich Repeat (LRR) domain","termid":"PBO:0083875"}


id: GO:0140891
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process leading to the generation of a functional small regulatory non-coding RNA derived from a tRNA.","definition_xrefs":["PMID:29120263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA processing","termid":"GO:0070918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"tRNA-derived regulatory ncRNA processing","synonyms":[{"name":"tRNA-derived small RNA processing","type":"related"}],"termid":"GO:0140891"}


id: GO:1903513
data:
  {"annotated_genes":["SJAG_00530","SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88999,85326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030970"}]},"cv_name":"biological_process","definition":"The directed movement of substances from endoplasmic reticulum to cytosol.","definition_xrefs":["GOC:rl","GOC:BHF","GO_REF:0000076","GOC:TermGenie","GOC:mtg_cardiac_conduct_nov11","PMID:16402920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00530":null,"SJAG_03345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"endoplasmic reticulum to cytosol transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER to cytosol transport","type":"exact"}],"termid":"GO:1903513","terms_by_termid":{"GO:0030970":null}}


id: PBO:0027855
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_vacuolar_membrane","termid":"PBO:0027855"}


id: PBO:0045672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein cytoplasmic 1 intermediate chain 2 pseudogene 1","termid":"PBO:0045672"}


id: PBO:0005010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orotidine 5'-phosphate decarboxylase Ura4","termid":"PBO:0005010"}


id: FYPO:0006862
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which an RNA that is not normally found in the cytoplasm is observed there.","definition_xrefs":["PMID:29424342","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"mislocalized RNA during vegetative growth","termid":"FYPO:0006861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"RNA mislocalized to cytoplasm during vegetative growth","synonyms":[{"name":"RNA mislocalised to cytoplasm during vegetative growth","type":"exact"},{"name":"RNA mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"ectopic RNA localization to cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0006862"}


id: GO:0140910
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex consisting of ADAM17 in complex with regulatory iRhoms and FERM domain containing proteins.","definition_xrefs":["PMID:29897336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"iRhom2/ADAM17 sheddase complex","termid":"GO:0140910"}


id: PBO:0000186
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.4.4.2","termid":"PBO:0000186"}


id: GO:0022029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another at least one of which is located in the telencephalon.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:curators","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"forebrain cell migration","termid":"GO:0021885"},{"relation_name":"part_of","term_name":"telencephalon development","termid":"GO:0021537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telencephalon cell migration","termid":"GO:0022029"}


id: GO:0008539
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Stops, prevents or reduces the activity of the proteasome complex. The proteasome complex performs regulated ubiquitin-dependent cytosolic and nuclear proteolysis.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete proteasome inhibitor activity (obsolete GO:0008539)","synonyms":[{"name":"PI-31","type":"narrow"},{"name":"proteasome inhibitor activity","type":"exact"}],"termid":"GO:0008539"}


id: PBO:0090987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Tlg2","termid":"PBO:0090987"}


id: GO:0000465
data:
  {"annotated_genes":["SJAG_04006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103506],"is_not":false,"summary":null,"term":"GO:0000465"}]},"cv_name":"biological_process","definition":"Exonucleolytic digestion of a pre-rRNA molecule to generate the mature 5'-end of a 5.8S rRNA molecule derived from an originally tricistronic pre-rRNA transcript that contained the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript.","definition_xrefs":["PMID:10690410","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA 5'-end processing","termid":"GO:0000967"},{"relation_name":"part_of","term_name":"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000466"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0008150","GO:0042254","GO:0010467","GO:0044085"],"is_obsolete":false,"name":"exonucleolytic trimming to generate mature 5'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0000465","terms_by_termid":{"GO:0000465":null}}


id: GO:0039702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Viral budding which uses a host ESCRT protein complex, or complexes, to mediate the budding process.","definition_xrefs":["VZ:1536","UniProtKB-KW:KW-1187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral budding","termid":"GO:0046755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral budding via host ESCRT complex","synonyms":[{"name":"host-assisted viral budding","type":"broad"},{"name":"viral budding through the ESCRT machinery","type":"related"}],"termid":"GO:0039702"}


id: PATO:0001577
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A permeability which is relatively high.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"permeable","termid":"PATO:0000982"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased permeability","synonyms":[{"name":"high permeability","type":"exact"}],"termid":"PATO:0001577"}


id: GO:0051116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + Co(2+) + H2O + hydrogenobyrinate a,c-diamide = ADP + cob(II)yrinate a,c diamide + 4 H+ + phosphate.","definition_xrefs":["RHEA:15341","EC:6.6.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming nitrogen-metal bonds, forming coordination complexes","termid":"GO:0051003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"cobaltochelatase activity","secondary_identifiers":["KEGG_REACTION:R05227","MetaCyc:R342-RXN"],"synonyms":[{"name":"CobN-CobST","type":"related"},{"name":"CobNST","type":"narrow"},{"name":"hydrogenobyrinic acid a,c-diamide cobaltochelatase activity","type":"exact"},{"name":"hydrogenobyrinic-acid-a,c-diamide:cobalt cobalt-ligase (ADP-forming)","type":"related"}],"termid":"GO:0051116"}


id: GO:0098831
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized region below the presynaptic membrane, characterized by electron-dense material, a specialized cytoskeletal matrix and accumulated (associated) synaptic vesicles.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"},{"relation_name":"part_of","term_name":"presynaptic active zone","termid":"GO:0048786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"presynaptic active zone cytoplasmic component","synonyms":[{"name":"cortex of presynaptic active zone","type":"exact"},{"name":"presynaptic zone cortex","type":"exact"}],"termid":"GO:0098831"}


id: GO:2001129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a methane from a dimethylamine.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine metabolic process","termid":"GO:0009308"},{"relation_name":"is_a","term_name":"methanogenesis","termid":"GO:0015948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"methane biosynthetic process from dimethylamine","termid":"GO:2001129"}


id: PBO:0081008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZBTB44 divergent transcript","termid":"PBO:0081008"}


id: GO:0019512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lactose, via the intermediate tagatose-6-phosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactose catabolic process","termid":"GO:0005990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"lactose catabolic process via tagatose-6-phosphate","secondary_identifiers":["MetaCyc:LACTOSECAT-PWY"],"synonyms":[{"name":"lactose breakdown via tagatose-6-phosphate","type":"exact"},{"name":"lactose degradation via tagatose-6-phosphate","type":"exact"}],"termid":"GO:0019512"}


id: GO:0160150
data:
  {"annotated_genes":["SJAG_03572"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102278],"is_not":false,"summary":null,"term":"GO:0160150"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(13) in tRNA = pseudouridine(13) in tRNA.","definition_xrefs":["EC:5.4.99.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA pseudouridine synthase activity","termid":"GO:0106029"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03572":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140101","GO:0003824","GO:0016853","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"tRNA pseudouridine(13) synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:42540"],"termid":"GO:0160150","terms_by_termid":{"GO:0160150":null}}


id: FYPO:0007070
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which binding to a nuclear localization sequence (NLS) in a protein by a gene product (usually a protein) in a mutant does not occur. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abolished NLS binding","synonyms":[{"name":"NLS binding abolished","type":"exact"},{"name":"abolished nuclear localisation sequence binding","type":"exact"},{"name":"abolished nuclear localization sequence binding","type":"exact"},{"name":"abolished nuclear localization signal binding","type":"exact"}],"termid":"FYPO:0007070"}


id: GO:0008401
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the conversion of retinoic acid to 4-hydroxy-retinoic acid.","definition_xrefs":["PMID:19519282","PMID:9250660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"retinoic acid 4-hydroxylase activity","secondary_identifiers":["Reactome:R-HSA-211874","Reactome:R-HSA-212007","Reactome:R-HSA-5362525","Reactome:R-HSA-5602050","Reactome:R-HSA-5602063","Reactome:R-HSA-211923"],"synonyms":[{"name":"cytochrome P450 CYP261","type":"narrow"}],"termid":"GO:0008401"}


id: GO:0030544
data:
  {"annotated_genes":["SJAG_00403","SJAG_03094","SJAG_00436","SJAG_01160","SJAG_03135","SJAG_01914","SJAG_03955"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58419,65643,66138,70075,76732,78550,78910],"is_not":false,"summary":null,"term":"GO:0030544"}]},"cv_name":"molecular_function","definition":"Binding to a Hsp70 protein, heat shock proteins around 70kDa in size.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heat shock protein binding","termid":"GO:0031072"},{"relation_name":"is_a","term_name":"protein-folding chaperone binding","termid":"GO:0051087"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00403":null,"SJAG_00436":null,"SJAG_01160":null,"SJAG_01914":null,"SJAG_03094":null,"SJAG_03135":null,"SJAG_03955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"Hsp70 protein binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0030544","terms_by_termid":{"GO:0030544":null}}


id: GO:0036320
data:
  {"annotated_genes":["SJAG_01978"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[84211],"is_not":false,"summary":null,"term":"GO:0036320"}]},"cv_name":"molecular_function","definition":"Combining with the mating-type peptide pheromone P-factor and transmitting the signal across the membrane to initiate a change in cell activity. P-factor is a polypeptide of 23 residues, with the sequence Thr-Tyr-Ala-Asp-Phe-Leu-Arg-Ala-Tyr-Gln-Ser-Trp-Asn-Thr-Phe-Val-Asn-Pro-Asp-Arg-Pro-Asn-Leu, and is a peptide pheromone released by Schizosaccharomyces pombe cells of the cellular mating type Plus.","definition_xrefs":["GOC:al","PMID:8314086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating-type factor pheromone receptor activity","termid":"GO:0004932"},{"relation_name":"is_a","term_name":"peptide pheromone receptor activity","termid":"GO:0036318"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"mating-type P-factor pheromone receptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"P-factor mating pheromone receptor activity","type":"exact"},{"name":"P-factor receptor activity","type":"exact"}],"termid":"GO:0036320","terms_by_termid":{"GO:0036320":null}}


id: PBO:0044910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA fragmentation factor subunit beta","termid":"PBO:0044910"}


id: GO:0075167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont G-protein gamma subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G-protein gamma subunit-mediated signal transduction in response to host (obsolete GO:0075167)","synonyms":[{"name":"negative regulation of symbiont G-protein gamma subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075167"}


id: GO:1901353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidylglycerol biosynthetic process.","definition_xrefs":["GOC:dgf","GOC:TermGenie","PMID:12869188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular biosynthetic process","termid":"GO:0031328"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid biosynthetic process","termid":"GO:0071073"},{"relation_name":"is_a","term_name":"regulation of phosphatidylglycerol biosynthetic process","termid":"GO:1901351"},{"relation_name":"positively_regulates","term_name":"phosphatidylglycerol biosynthetic process","termid":"GO:0006655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of phosphatidylglycerol biosynthetic process","synonyms":[{"name":"activation of phosphatidylglycerol anabolism","type":"narrow"},{"name":"activation of phosphatidylglycerol biosynthesis","type":"narrow"},{"name":"activation of phosphatidylglycerol biosynthetic process","type":"narrow"},{"name":"activation of phosphatidylglycerol formation","type":"narrow"},{"name":"activation of phosphatidylglycerol synthesis","type":"narrow"},{"name":"positive regulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"positive regulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"positive regulation of phosphatidylglycerol formation","type":"exact"},{"name":"positive regulation of phosphatidylglycerol synthesis","type":"exact"},{"name":"up regulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"up regulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"up regulation of phosphatidylglycerol biosynthetic process","type":"exact"},{"name":"up regulation of phosphatidylglycerol formation","type":"exact"},{"name":"up regulation of phosphatidylglycerol synthesis","type":"exact"},{"name":"up-regulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"up-regulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"up-regulation of phosphatidylglycerol biosynthetic process","type":"exact"},{"name":"up-regulation of phosphatidylglycerol formation","type":"exact"},{"name":"up-regulation of phosphatidylglycerol synthesis","type":"exact"},{"name":"upregulation of phosphatidylglycerol anabolism","type":"exact"},{"name":"upregulation of phosphatidylglycerol biosynthesis","type":"exact"},{"name":"upregulation of phosphatidylglycerol biosynthetic process","type":"exact"},{"name":"upregulation of phosphatidylglycerol formation","type":"exact"},{"name":"upregulation of phosphatidylglycerol synthesis","type":"exact"}],"termid":"GO:1901353"}


id: PBO:0045301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 3","termid":"PBO:0045301"}


id: GO:0150063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the visual system over time, from its formation to the mature structure, including the eye, parts of the central nervous system (CNS) involved in processing of visual inputs, and connecting nerve pathways.","definition_xrefs":["PMID:15004427","GOC:bc","PMID:20647017","GOC:krc","GOC:aruk","PMID:22632727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory system development","termid":"GO:0048880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"visual system development","synonyms":[{"name":"optic pathway development","type":"related"},{"name":"visual pathway development","type":"related"}],"termid":"GO:0150063"}


id: GO:0102919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: FMNH2 + O2 = 5,6-dimethylbenzimidazole + D-erythrose 4-phosphate + dialuric acid.","definition_xrefs":["GOC:pz","EC:1.13.11.79"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"5,6-dimethylbenzimidazole synthase activity","secondary_identifiers":["MetaCyc:RXN-8771","RHEA:27345"],"termid":"GO:0102919"}


id: GO:0018080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The bromination of peptidyl-tryptophan, to form peptidyl-L-6'-bromotryptophan.","definition_xrefs":["RESID:AA0179"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-tryptophan bromination (obsolete GO:0018080)","termid":"GO:0018080"}


id: PBO:0045131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 1","termid":"PBO:0045131"}


id: GO:2000056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of Wnt signaling pathway involved in digestive tract morphogenesis.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of Wnt signaling pathway involved in digestive tract morphogenesis (obsolete GO:2000056)","synonyms":[{"name":"regulation of Wnt receptor signaling pathway involved in digestive tract morphogenesis","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway involved in digestive tract morphogenesis","type":"exact"},{"name":"regulation of Wnt-activated signaling pathway involved in digestive tract morphogenesis","type":"related"}],"termid":"GO:2000056"}


id: PR:O94479
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1919.12c gene.","definition_xrefs":["UniProtKB:O94479","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane protease (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.12c","synonyms":[{"name":"FXNA-related family protease 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC1919.12c","type":"exact"}],"termid":"PR:O94479"}


id: GO:0072709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sorbitol stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to carbohydrate stimulus","termid":"GO:0071322"},{"relation_name":"is_a","term_name":"response to sorbitol","termid":"GO:0072708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sorbitol","synonyms":[{"name":"cellular response to glucitol","type":"exact"}],"termid":"GO:0072709"}


id: PBO:0046112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4E family member 3","termid":"PBO:0046112"}


id: PBO:0030329
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_cellular_phosphoinositide_level","termid":"PBO:0030329"}


id: GO:0050584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: linoleate + O2 = (9Z,11S,12Z)-11-hydroperoxyoctadeca-9,12-dienoate.","definition_xrefs":["EC:1.13.11.45","RHEA:18993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"linoleate 11-lipoxygenase activity","secondary_identifiers":["KEGG_REACTION:R05718","MetaCyc:1.13.11.45-RXN"],"synonyms":[{"name":"linoleate dioxygenase activity","type":"related"},{"name":"linoleate:oxygen 11S-oxidoreductase activity","type":"related"},{"name":"manganese lipoxygenase activity","type":"related"}],"termid":"GO:0050584"}


id: GO:0036136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-kynurenine + 2-oxoglutarate = 4-(2-aminophenyl)-2,4-dioxobutanoate + L-aspartate.","definition_xrefs":["GOC:pde","PMID:15606768","PMID:4149765"],"gene_count":0,"genotype_count":0,"name":"obsolete kynurenine-oxaloacetate transaminase activity (obsolete GO:0036136)","synonyms":[{"name":"L-kynurenine-oxaloacetate transaminase activity","type":"exact"}],"termid":"GO:0036136"}


id: PR:Q8NIQ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2F3.18c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8NIQ1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C2F3.18c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.18c","synonyms":[{"name":"Spom972h-SPAC2F3.18c","type":"exact"}],"termid":"PR:Q8NIQ1"}


id: PBO:0081630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF559-ZNF177 readthrough","termid":"PBO:0081630"}


id: PBO:0043993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSGALNACT2 divergent transcript","termid":"PBO:0043993"}


id: PBO:0090182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom7","termid":"PBO:0090182"}


id: PBO:0062344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily K member 3","termid":"PBO:0062344"}


id: PR:P87245
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- kms1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyogamy meiotic segregation protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A11.05c","synonyms":[{"name":"Spom972h-kms1","type":"exact"}],"termid":"PR:P87245"}


id: PBO:0030397
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_cellular_response_to_pheromone","termid":"PBO:0030397"}


id: PR:O13671
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exportin-2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02811","PANTHER:PTHR10997:SF8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin-alpha re-exporter (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30B4.05","secondary_identifiers":["UniProtKB:O13671"],"synonyms":[{"name":"Spom972h-CSE1L","type":"exact"},{"name":"cellular apoptosis susceptibility protein homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13671"}


id: GO:0097692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of one methyl group to lysine at position 4 of the histone.","definition_xrefs":["PMID:26320581","GOC:jh2"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K4 monomethylation (obsolete GO:0097692)","termid":"GO:0097692"}


id: GO:0005364
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[91833],"is_not":false,"summary":null,"term":"GO:0005364"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: maltose(out) + H+(out) = maltose(in) + H+(in).","definition_xrefs":["TC:2.A.1.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:proton symporter activity","termid":"GO:0005351"},{"relation_name":"is_a","term_name":"maltose transmembrane transporter activity","termid":"GO:0005363"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"maltose:proton symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hydrogen/maltose transporter activity","type":"broad"},{"name":"maltose permease","type":"broad"},{"name":"maltose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0005364","terms_by_termid":{"GO:0005364":null}}


id: PBO:0051769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin 13","termid":"PBO:0051769"}


id: FYPO:0004068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the serine residue at position 5 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II occurs to a lower extent than normal.","definition_xrefs":["GO:0071620","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"},{"relation_name":"is_a","term_name":"abnormal RNA polymerase II C-terminal domain phosphorylation","termid":"FYPO:0007410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during vegetative growth","synonyms":[{"name":"decreased phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during mitotic cell cycle","type":"related"},{"name":"decreased phosphorylation of RNA polymerase II CTD serine 5 residues during vegetative growth","type":"exact"},{"name":"reduced phosphorylation of RNA polymerase II C-terminal domain serine 5 residues during vegetative growth","type":"exact"}],"termid":"FYPO:0004068"}


id: GO:0006924
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A T cell apoptotic process that occurs towards the end of the expansion phase following the initial activation of mature T cells by antigen and is triggered by T cell receptor stimulation and signals transmitted via various surface-expressed members of the TNF receptor family such as Fas ligand, Fas, and TNF and the p55 and p75 TNF receptors.","definition_xrefs":["ISBN:0781765196","PMID:12414721","GOC:add","PMID:12752672","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell apoptotic process","termid":"GO:0070231"},{"relation_name":"part_of","term_name":"T cell homeostasis","termid":"GO:0043029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation-induced cell death of T cells","synonyms":[{"name":"AICD","type":"broad"},{"name":"activated T cell apoptosis","type":"broad"},{"name":"activation-induced cell death of T lymphocytes","type":"exact"},{"name":"activation-induced cell death of T-cells","type":"exact"},{"name":"activation-induced cell death of T-lymphocytes","type":"exact"},{"name":"antigen-driven apoptosis","type":"broad"}],"termid":"GO:0006924"}


id: PBO:0046430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor B6","termid":"PBO:0046430"}


id: FYPO:0003438
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the G1/S transition of the mitotic cell cycle begins later than normal after the cell has been arrested in G1 phase due to nitrogen starvation. The duration of G1 arrest is thus longer than normal.","definition_xrefs":["PMID:8657126","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic G1/S phase transition delay","termid":"FYPO:0000333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"mitotic G1/S phase transition delay following nitrogen starvation-induced G1 phase arrest","synonyms":[{"name":"delayed cell cycle progression through mitotic G1/S phase transition following cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","type":"exact"},{"name":"delayed mitotic G1 phase progression following nitrogen starvation-induced G1 phase arrest","type":"related"},{"name":"increased duration of nitrogen starvation-induced mitotic G1 phase arrest","type":"related"},{"name":"mitotic G1/S phase transition delay after recovery from nitrogen starvation-induced G1 arrest","type":"exact"},{"name":"mitotic G1/S transition delay following nitrogen starvation-induced G1 phase arrest","type":"exact"},{"name":"mitotic cell cycle delay at G1/S transition following nitrogen starvation-induced G1 phase arrest","type":"exact"}],"termid":"FYPO:0003438"}


id: PBO:0073901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 14 member 2","termid":"PBO:0073901"}


id: PBO:0065983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1G","termid":"PBO:0065983"}


id: GO:2000540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein geranylgeranylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular metabolic process","termid":"GO:0031324"},{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of protein geranylgeranylation","termid":"GO:2000539"},{"relation_name":"negatively_regulates","term_name":"protein geranylgeranylation","termid":"GO:0018344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein geranylgeranylation","synonyms":[{"name":"negative regulation of C-terminal protein geranylgeranylation","type":"related"},{"name":"negative regulation of protein amino acid geranylgeranylation","type":"exact"}],"termid":"GO:2000540"}


id: PBO:0039636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amine oxidase copper containing 4, pseudogene","termid":"PBO:0039636"}


id: GO:0150002
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The dendrite of the dendritic tree that is farthest away from the neuronal cell body (the soma).","definition_xrefs":["GOC:bc","PMID:20629984","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"distal dendrite","termid":"GO:0150002"}


id: GO:1901976
data:
  {"annotated_genes":["SJAG_02336","SJAG_03353","SJAG_01837","SJAG_03327","SJAG_01297","SJAG_01679","SJAG_03681","SJAG_04259","SJAG_02451","SJAG_02169","SJAG_03126","SJAG_00883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[86780,111970,99959,95647,109848,110336,108020,103285,104307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[90259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[109853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[112756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"},{"annotations":[97392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905325"},{"annotations":[90260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090266"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell cycle checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie","PMID:23028116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell cycle phase transition","termid":"GO:1901987"},{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"cell cycle checkpoint signaling","termid":"GO:0000075"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of cell cycle checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:2001047"],"synonyms":[{"name":"regulation of G1/S checkpoint","type":"related"},{"name":"regulation of G1/S transition checkpoint","type":"related"}],"termid":"GO:1901976","terms_by_termid":{"GO:0090266":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:1905325":null,"GO:1905326":null}}


id: PBO:0036357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 3, Coa3 (predicted)","termid":"PBO:0036357"}


id: PBO:0046271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 10","termid":"PBO:0046271"}


id: PATO:0001367
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's having deeply undulating edges forming lobes.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"surface feature shape","termid":"PATO:0001925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lobate","termid":"PATO:0001367"}


id: PBO:0073704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKI2 subunit of superkiller complex","termid":"PBO:0073704"}


id: GO:0048874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process involved in maintaining the steady-state number of cells within a population of free-living cells such as the bacteria in the gut.","definition_xrefs":["PMID:25757720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"},{"relation_name":"is_a","term_name":"modulation by host of symbiont process","termid":"GO:0051851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"host-mediated regulation of intestinal microbiota composition","synonyms":[{"name":"homeostasis of number of cells in a free-living population","type":"related"},{"name":"host-induced regulation of intestinal microbiota composition","type":"related"}],"termid":"GO:0048874"}


id: GO:0098771
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